RchiOBHm_Chr1g0352571

Phosphoinositide phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
46018017 .. 46021584
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 282 bp
ATGGGGCTCAATTATCTAGCTGCACTTAGCAATATCACCAATTTCAAAAGAGAGGCTTTTGGAAAGCATGCTTCTCAATTCTCACTTTCTCAGTCAATATTAGAAGACTCTCTCTTTAAGAGAAGACGCAAGTTGATTGAAGGTTGGATGGCCAAACCAATATGGAAGCAGGCTGACCCTCGATTTGTATGGAACAAAAATCTTTTGGATGAACTTATCGAGTTCAAGTTAAGATTTTTCTACTGTAAGGGGGATCCAGAAACAGATTTCTACAAGTTCTAA

Protein Analysis

93

Amino Acids

11.14

Weight (kDa)

9.52

Isoelectric Point (pI)

65.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 248, 261
AcoI YGGCCR 1 cut(s) 150
AgsI TTSAA 3 cut(s) 46, 140, 226
AluBI AGCT 1 cut(s) 20
AluI AGCT 1 cut(s) 20
AlwI GGATC 2 cut(s) 248, 261
AoxI GGCC 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 20
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AsuHPI GGTGA 1 cut(s) 28
BalI TGGCCA 1 cut(s) 152
BamHI GGATCC 1 cut(s) 253
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 2 cut(s) 111, 130
BbvI GCAGC 1 cut(s) 7
BccI CCATC 1 cut(s) 142
BfaI CTAG 1 cut(s) 17
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
BmiI GGNNCC 1 cut(s) 255
BpiI GAAGAC 2 cut(s) 111, 130
BseGI GGATG 2 cut(s) 153, 214
BseMII CTCAG 1 cut(s) 104
BseXI GCAGC 1 cut(s) 7
BsgI GTGCAG 1 cut(s) 6
BshFI GGCC 1 cut(s) 152
BsnI GGCC 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 9
Bsp143I GATC 1 cut(s) 253
BspANI GGCC 1 cut(s) 152
BspCNI CTCAG 1 cut(s) 103
BspLI GGNNCC 1 cut(s) 255
BspPI GGATC 2 cut(s) 248, 261
BssMI GATC 1 cut(s) 253
Bst4CI ACNGT 1 cut(s) 245
BstC8I GCNNGC 2 cut(s) 69, 171
BstDEI CTNAG 2 cut(s) 26, 90
BstF5I GGATG 2 cut(s) 153, 214
BstKTI GATC 1 cut(s) 256
BstMBI GATC 1 cut(s) 253
BstNSI RCATGY 1 cut(s) 71
BstV1I GCAGC 1 cut(s) 7
BstV2I GAAGAC 2 cut(s) 111, 130
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
BsuRI GGCC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 153, 214
Cac8I GCNNGC 2 cut(s) 69, 171
CseI GACGC 1 cut(s) 135
CviAII CATG 1 cut(s) 68
CviJI RGCY 5 cut(s) 7, 20, 56, 152, 173
CviKI_1 RGCY 5 cut(s) 7, 20, 56, 152, 173
DdeI CTNAG 2 cut(s) 26, 90
DpnI GATC 1 cut(s) 255
DpnII GATC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 150
Eco24I GRGCYC 1 cut(s) 9
EcoT38I GRGCYC 1 cut(s) 9
FaeI CATG 1 cut(s) 71
FaiI YATR 3 cut(s) 69, 163, 190
FalI AAGNNNNNCTT 2 cut(s) 40, 72
FatI CATG 1 cut(s) 67
Fnu4HI GCNGC 1 cut(s) 21
FokI GGATG 2 cut(s) 160, 221
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 21
FspBI CTAG 1 cut(s) 17
GluI GCNGC 1 cut(s) 21
HaeIII GGCC 1 cut(s) 152
HgaI GACGC 1 cut(s) 135
Hin1II CATG 1 cut(s) 71
HinfI GANTC 1 cut(s) 107
HphI GGTGA 1 cut(s) 28
Hpy188III TCNNGA 1 cut(s) 257
HpyAV CCTTC 1 cut(s) 134
HpyCH4III ACNGT 1 cut(s) 245
HpyCH4V TGCA 1 cut(s) 23
HpyF3I CTNAG 2 cut(s) 26, 90
Hsp92II CATG 1 cut(s) 71
Kzo9I GATC 1 cut(s) 253
LpnPI CCDG 2 cut(s) 155, 270
Lsp1109I GCAGC 1 cut(s) 7
MaeI CTAG 1 cut(s) 17
MalI GATC 1 cut(s) 255
MboI GATC 1 cut(s) 253
MboII GAAGA 2 cut(s) 116, 135
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 1 cut(s) 9
MlsI TGGCCA 1 cut(s) 152
MluCI AATT 3 cut(s) 10, 40, 77
MluNI TGGCCA 1 cut(s) 152
MlyI GAGTC 1 cut(s) 101
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 2 cut(s) 46, 189
Mox20I TGGCCA 1 cut(s) 152
MscI TGGCCA 1 cut(s) 152
MseI TTAA 2 cut(s) 117, 230
Msp20I TGGCCA 1 cut(s) 152
NdeII GATC 1 cut(s) 253
NlaIII CATG 1 cut(s) 71
NlaIV GGNNCC 1 cut(s) 255
NspI RCATGY 1 cut(s) 71
PaeI GCATGC 1 cut(s) 71
PkrI GCNGC 1 cut(s) 22
PleI GAGTC 1 cut(s) 101
PpsI GAGTC 1 cut(s) 101
PspN4I GGNNCC 1 cut(s) 255
PsuI RGATCY 1 cut(s) 253
SaqAI TTAA 2 cut(s) 117, 230
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 1 cut(s) 253
SchI GAGTC 1 cut(s) 101
SduI GDGCHC 1 cut(s) 9
SetI ASST 2 cut(s) 22, 145
SgeI CNNG 8 cut(s) 29, 80, 142, 182, 192, 232, 238, 269
SphI GCATGC 1 cut(s) 71
Sse9I AATT 3 cut(s) 10, 40, 77
SspI AATATT 1 cut(s) 99
SspMI CTAG 1 cut(s) 17
TaaI ACNGT 1 cut(s) 245
TaqI TCGA 2 cut(s) 181, 219
TasI AATT 3 cut(s) 10, 40, 77
Tru1I TTAA 2 cut(s) 117, 230
Tru9I TTAA 2 cut(s) 117, 230
TseI GCWGC 1 cut(s) 20
TspDTI ATGAA 1 cut(s) 225
XceI RCATGY 1 cut(s) 71
XspI CTAG 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.