Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002147

Physical Location & Seq

Genomic Coordinates Reverse (-)

12589342 .. 12590949

Gene Structure 1608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47538

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGTTTCCTCTCAATCCCAAACATATGCCTAAATCAGTGGCCTCCCTAATATCAGACCATGCTTCCTCCCTAATCTCAGGCTATGCTTCCATTACAGCAATAGGGATGTTGTTCCGTGCAGTTGTCAAAGAACTCAAAGACCTCATTCCCCCCTGGGTTAGATCATACATATACTCGAAACTCCGGAACTACTTCTTTAGACCTCCTCCCCCAAATAATCAACTAACATTTGTCATAAAAAAGAACACTGGCATGGAGCCTAACGAGGTCTATAAGAAGGTAGAGGTCTACCTCGGAGCCAAGATTAGTCCCTCCGATATGCGTCTTGAACTGAGCAAAACAAACCGGCAGAAGACAATCAGCCTTGCCATTGAAAAGAGAGGCCAAGTTGTCAAGGACACCTTTGATGACATTAAGCTCCAGTGGCGCTACATAGCCAAATCAAAGAAGTCATCCAAAACCAACAACAGTCCTGCTGATGATGATGAAGAAGAGAAATATAACTGTGGCTTTGAGTTAACTTTCAATAAGAAACACAAAGCCAAAGTGATGGACTCCTACATGCCCTATGTGTTTGCTCAGGCTGATTCCATTCAGCGACGGCAAAAGGTTCTAAAGCTTTATTGCTCTTCTAAAAGTAGCATAGATCTTGTGCACCCTGCTACTTTTGACACAGTGGCAATGGAACCAGAACTTAAGAAAATGATTATAGATGACTTGGATAGGTTTCTGGAGAGGAGAGAATTATATAAGAAGGTTGGGAAGGCATGGAAAAGAGGATATTTGTTATATGGTCCACCTGGAACTGGAAAATCTAGCTTAATTGCTGCTATGGCCAATTATCTCAAGTTTGATATATATGATTTGGAGCTTTCTACTATTTACAGCAACTCTGACCTGAGAAGGGTATTGCTGTCTACTACTAATCGTTCCATTGTGGTCATTGAGGATATTGATTGCAGTGTGAAGATCAATAATCGGGAATCAGCTATGTCATCTAAGACCGCAACACCCGGTATTCCTGCAAGCAAGTTCACACTCTCGGGCCTACTGAACTTCATTGATGGTTTGTGGTCATGCTGCGGTGATGAGAGGATAATTGTGTTCACCACCAACCACAAGGACAAACTAGACCCTGCATTGTTGCGTCCAGGTCGAATGGACGTGCACATCCACTTGTCATATTGCACTCCAAGTGGATTCAGAACCTTAGCATCTAACTACCTTGGCATTCATGAAAGCAACCCTCATCACCTCTGTGGGGAAATTGAAAGCTTAATAGAGAGCACAGAGGTCACTCCTGCAGCTGTAGCTGAGGCGCTTATGAAGAGTGATGATGTAGATGTTGTTCTTGAAGGGCTTGTCAAATTCCTCAAAGAAAAGAAGGCAGCAGATGATAAAATAAAGTTAAAAAATGCTAAAAAGACCGAGGAGGAAAGGACTAAGGCAGAAGAGGAGGAAGGGGCTAACAAAGCTTTCCTGCCTCTCTGGGATGAGGATTTGAGCACAAACTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

505

Amino Acids

57.14

Weight (kDa)

8.78

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	49 - 145	8.6e-19	Domain associated at C-terminal with AAA
AAA	PF00004	261 - 394	2.9e-19	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	396 - 465	8.2e-22	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002147)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12713 FvH4_1g12717 FvH4_1g12718 FvH4_1g12719 FvH4_7g23320
rosa_chinensis	RchiOBHm_Chr2g0100731 RchiOBHm_Chr2g0100741 RchiOBHm_Chr2g0100751 RchiOBHm_Chr2g0100761 RchiOBHm_Chr2g0100771
rosa_laevigata	RLG00000017003 RLG00000017005 RLG00000017006 RLG00000017007 RLG00000017008
rosa_multiflora	Rmu_sc0001659.1_g000011 Rmu_sc0001659.1_g000013 Rmu_sc0001659.1_g000014 Rmu_sc0001659.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141880 Rroxscaffold_2G00141890 Rroxscaffold_2G00141900 Rroxscaffold_2G00141910 Rroxscaffold_2G00141920
rosa_rugosa	Rorug02G0092200 Rorug02G0092300 Rorug02G0092400 Rorug02G0092500
rosa_samantha	Rh2BG144600 Rh2BG144700 Rh2BG145000 Rh2BG145200 Rh2CG145600 Rh2CG145800 Rh2CG145900 Rh2CG146000 Rh2CG146100 Rh2DG145100 Rh2DG145300 Rh2DG145400 Rh2DG145500 Rh2DG145600
rosa_wichuraiana	Rw2G010960 Rw2G010970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	288, 917
AccIII	TCCGGA	1 cut(s)	183
AciI	CCGC	2 cut(s)	1005, 1083
AcoI	YGGCCR	1 cut(s)	834
AcsI	RAATTY	1 cut(s)	1367
AfiI	CCNNNNNNNGG	3 cut(s)	806, 904, 1261
AflII	CTTAAG	1 cut(s)	695
AgsI	TTSAA	5 cut(s)	329, 374, 526, 1271, 1355
AjiI	CACGTC	1 cut(s)	1165
AjnI	CCWGG	3 cut(s)	152, 799, 1150
AleI	CACNNNNGTG	1 cut(s)	1257
AluBI	AGCT	9 cut(s)	418, 619, 819, 871, 989, 1275, 1307, 1313, 1475
AluI	AGCT	9 cut(s)	418, 619, 819, 871, 989, 1275, 1307, 1313, 1475
Alw21I	GWGCWC	4 cut(s)	657, 1170, 1289, 1508
Alw44I	GTGCAC	2 cut(s)	653, 1166
Ama87I	CYCGRG	1 cut(s)	1042
Aor13HI	TCCGGA	1 cut(s)	183
AoxI	GGCC	4 cut(s)	39, 382, 834, 1045
ApaLI	GTGCAC	2 cut(s)	653, 1166
ApeKI	GCWGC	4 cut(s)	827, 1080, 1304, 1388
ApoI	RAATTY	1 cut(s)	1367
Asp700I	GAANNNNTTC	1 cut(s)	191
AspLEI	GCGC	2 cut(s)	429, 1321
AspS9I	GGNCC	2 cut(s)	794, 1045
AsuC2I	CCSGG	1 cut(s)	1014
AsuHPI	GGTGA	3 cut(s)	1097, 1099, 1244
AvaI	CYCGRG	1 cut(s)	1042
AvaII	GGWCC	1 cut(s)	794
BaeGI	GKGCMC	2 cut(s)	657, 1170
BalI	TGGCCA	1 cut(s)	836
BbsI	GAAGAC	1 cut(s)	359
Bbv12I	GWGCWC	4 cut(s)	657, 1170, 1289, 1508
BbvCI	CCTCAGC	1 cut(s)	1314
BbvI	GCAGC	4 cut(s)	814, 1067, 1316, 1400
BccI	CCATC	2 cut(s)	544, 1058
BceAI	ACGGC	1 cut(s)	617
BciT130I	CCWGG	3 cut(s)	154, 801, 1152
BcnI	CCSGG	1 cut(s)	1014
BfaI	CTAG	3 cut(s)	816, 1130, 1516
BfmI	CTRYAG	2 cut(s)	1302, 1308
BfoI	RGCGCY	2 cut(s)	430, 1322
BfrI	CTTAAG	1 cut(s)	695
BglII	AGATCT	1 cut(s)	646
BisI	GCNGC	4 cut(s)	828, 1081, 1305, 1389
BlsI	GCNGC	4 cut(s)	829, 1082, 1306, 1390
Bme1390I	CCNGG	4 cut(s)	154, 801, 1014, 1152
Bme18I	GGWCC	1 cut(s)	794
BmeT110I	CYCGRG	1 cut(s)	1042
BmgBI	CACGTC	1 cut(s)	1165
BmgT120I	GGNCC	2 cut(s)	794, 1045
BmiI	GGNNCC	3 cut(s)	258, 298, 687
BmrFI	CCNGG	4 cut(s)	154, 801, 1014, 1152
BmsI	GCATC	1 cut(s)	1223
BpiI	GAAGAC	1 cut(s)	359
BpmI	CTGGAG	2 cut(s)	404, 752
Bpu10I	CCTNAGC	3 cut(s)	579, 1210, 1314
BpuEI	CTTGAG	1 cut(s)	830
BpuMI	CCSGG	1 cut(s)	1014
BsaJI	CCNNGG	5 cut(s)	152, 153, 292, 1225, 1428
BsaWI	WCCGGW	1 cut(s)	183
Bsc4I	CCNNNNNNNGG	3 cut(s)	806, 904, 1261
Bse118I	RCCGGY	1 cut(s)	345
Bse1I	ACTGG	3 cut(s)	253, 421, 811
Bse3DI	GCAATG	1 cut(s)	687
BseAI	TCCGGA	1 cut(s)	183
BseBI	CCWGG	3 cut(s)	154, 801, 1152
BseDI	CCNNGG	5 cut(s)	152, 153, 292, 1225, 1428
BseGI	GGATG	4 cut(s)	111, 452, 1170, 1498
BseLI	CCNNNNNNNGG	3 cut(s)	806, 904, 1261
BseMI	GCAATG	1 cut(s)	687
BseMII	CTCAG	5 cut(s)	90, 323, 593, 890, 1305
BseNI	ACTGG	3 cut(s)	253, 421, 811
BseRI	GAGGAG	4 cut(s)	195, 751, 1445, 1469
BseSI	GKGCMC	2 cut(s)	657, 1170
BseXI	GCAGC	4 cut(s)	814, 1067, 1316, 1400
BsgI	GTGCAG	1 cut(s)	138
BshFI	GGCC	4 cut(s)	41, 384, 836, 1047
BsiHKAI	GWGCWC	4 cut(s)	657, 1170, 1289, 1508
BsiHKCI	CYCGRG	1 cut(s)	1042
BsiSI	CCGG	3 cut(s)	184, 346, 1014
BslFI	GGGAC	1 cut(s)	294
BslI	CCNNNNNNNGG	3 cut(s)	806, 904, 1261
BsmFI	GGGAC	1 cut(s)	294
BsmI	GAATGC	1 cut(s)	1230
BsnI	GGCC	4 cut(s)	41, 384, 836, 1047
BsoBI	CYCGRG	1 cut(s)	1042
Bsp1286I	GDGCHC	4 cut(s)	657, 1170, 1289, 1508
Bsp13I	TCCGGA	1 cut(s)	183
Bsp143I	GATC	3 cut(s)	161, 646, 969
BspACI	CCGC	2 cut(s)	1005, 1083
BspANI	GGCC	4 cut(s)	41, 384, 836, 1047
BspCNI	CTCAG	5 cut(s)	89, 324, 592, 891, 1306
BspEI	TCCGGA	1 cut(s)	183
BspHI	TCATGA	1 cut(s)	1234
BspLI	GGNNCC	3 cut(s)	258, 298, 687
BspMAI	CTGCAG	1 cut(s)	1306
BspQI	GCTCTTC	1 cut(s)	634
BspTI	CTTAAG	1 cut(s)	695
BsrDI	GCAATG	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	345
BsrI	ACTGG	3 cut(s)	253, 421, 811
BssAI	RCCGGY	1 cut(s)	345
BssECI	CCNNGG	5 cut(s)	152, 153, 292, 1225, 1428
BssMI	GATC	3 cut(s)	161, 646, 969
BssT1I	CCWWGG	1 cut(s)	1225
Bst2UI	CCWGG	3 cut(s)	154, 801, 1152
Bst4CI	ACNGT	3 cut(s)	470, 506, 676
Bst6I	CTCTTC	4 cut(s)	486, 634, 1322, 1446
BstAFI	CTTAAG	1 cut(s)	695
BstAPI	GCANNNNNTGC	1 cut(s)	1512
BstC8I	GCNNGC	1 cut(s)	1027
BstDEI	CTNAG	8 cut(s)	76, 332, 579, 899, 999, 1210, 1314, 1443
BstF5I	GGATG	4 cut(s)	111, 452, 1170, 1498
BstH2I	RGCGCY	2 cut(s)	430, 1322
BstHHI	GCGC	2 cut(s)	429, 1321
BstKTI	GATC	3 cut(s)	164, 649, 972
BstMBI	GATC	3 cut(s)	161, 646, 969
BstMWI	GCNNNNNNNGC	5 cut(s)	424, 833, 1310, 1472, 1512
BstNI	CCWGG	3 cut(s)	154, 801, 1152
BstNSI	RCATGY	1 cut(s)	565
BstSCI	CCNGG	4 cut(s)	152, 799, 1012, 1150
BstSFI	CTRYAG	2 cut(s)	1302, 1308
BstSLI	GKGCMC	2 cut(s)	657, 1170
BstV1I	GCAGC	4 cut(s)	814, 1067, 1316, 1400
BstV2I	GAAGAC	1 cut(s)	359
BstX2I	RGATCY	1 cut(s)	646
BstXI	CCANNNNNNTGG	1 cut(s)	550
BstYI	RGATCY	1 cut(s)	646
BsuRI	GGCC	4 cut(s)	41, 384, 836, 1047
BtrI	CACGTC	1 cut(s)	1165
BtsCI	GGATG	4 cut(s)	111, 452, 1170, 1498
BtsI	GCAGTG	1 cut(s)	967
BtsIMutI	CAGTG	5 cut(s)	42, 246, 428, 681, 967
Cac8I	GCNNGC	1 cut(s)	1027
CciI	TCATGA	1 cut(s)	1234
CfoI	GCGC	2 cut(s)	429, 1321
Cfr10I	RCCGGY	1 cut(s)	345
Cfr13I	GGNCC	2 cut(s)	794, 1045
CseI	GACGC	2 cut(s)	311, 1136
CviAII	CATG	6 cut(s)	59, 253, 562, 768, 1077, 1235
DdeI	CTNAG	8 cut(s)	76, 332, 579, 899, 999, 1210, 1314, 1443
DpnI	GATC	3 cut(s)	163, 648, 971
DpnII	GATC	3 cut(s)	161, 646, 969
EaeI	YGGCCR	1 cut(s)	834
Eam1104I	CTCTTC	4 cut(s)	486, 634, 1322, 1446
EarI	CTCTTC	4 cut(s)	486, 634, 1322, 1446
Eco130I	CCWWGG	1 cut(s)	1225
Eco47I	GGWCC	1 cut(s)	794
Eco88I	CYCGRG	1 cut(s)	1042
EcoRII	CCWGG	3 cut(s)	152, 799, 1150
EcoT14I	CCWWGG	1 cut(s)	1225
ErhI	CCWWGG	1 cut(s)	1225
FaeI	CATG	6 cut(s)	62, 256, 565, 771, 1080, 1238
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	1 cut(s)	294
FatI	CATG	6 cut(s)	58, 252, 561, 767, 1076, 1234
FauNDI	CATATG	1 cut(s)	24
FblI	GTMKAC	2 cut(s)	288, 917
Fnu4HI	GCNGC	4 cut(s)	828, 1081, 1305, 1389
FokI	GGATG	4 cut(s)	118, 439, 1157, 1505
Fsp4HI	GCNGC	4 cut(s)	828, 1081, 1305, 1389
FspBI	CTAG	3 cut(s)	816, 1130, 1516
GlaI	GCGC	2 cut(s)	428, 1320
GluI	GCNGC	4 cut(s)	828, 1081, 1305, 1389
GsuI	CTGGAG	2 cut(s)	404, 752
HaeII	RGCGCY	2 cut(s)	430, 1322
HaeIII	GGCC	4 cut(s)	41, 384, 836, 1047
HapII	CCGG	3 cut(s)	184, 346, 1014
HgaI	GACGC	2 cut(s)	311, 1136
HhaI	GCGC	2 cut(s)	429, 1321
Hin1II	CATG	6 cut(s)	62, 256, 565, 771, 1080, 1238
Hin6I	GCGC	2 cut(s)	427, 1319
HinP1I	GCGC	2 cut(s)	427, 1319
HincII	GTYRAC	1 cut(s)	519
HindII	GTYRAC	1 cut(s)	519
HindIII	AAGCTT	3 cut(s)	617, 1273, 1473
HinfI	GANTC	4 cut(s)	554, 587, 983, 1200
HpaI	GTTAAC	1 cut(s)	519
HpaII	CCGG	3 cut(s)	184, 346, 1014
HphI	GGTGA	3 cut(s)	1097, 1099, 1244
Hpy166II	GTNNAC	8 cut(s)	289, 519, 655, 797, 918, 1035, 1107, 1168
Hpy188I	TCNGA	5 cut(s)	55, 296, 316, 895, 1205
Hpy188III	TCNNGA	6 cut(s)	184, 326, 731, 980, 1235, 1352
Hpy8I	GTNNAC	8 cut(s)	289, 519, 655, 797, 918, 1035, 1107, 1168
Hpy99I	CGWCG	1 cut(s)	603
HpyAV	CCTTC	7 cut(s)	271, 748, 757, 897, 1349, 1378, 1454
HpyCH4III	ACNGT	3 cut(s)	470, 506, 676
HpyCH4IV	ACGT	1 cut(s)	1164
HpyCH4V	TGCA	8 cut(s)	119, 655, 960, 1025, 1139, 1168, 1188, 1304
HpyF10VI	GCNNNNNNNGC	5 cut(s)	424, 833, 1310, 1472, 1512
HpyF3I	CTNAG	8 cut(s)	76, 332, 579, 899, 999, 1210, 1314, 1443
HpySE526I	ACGT	1 cut(s)	1164
Hsp92II	CATG	6 cut(s)	62, 256, 565, 771, 1080, 1238
HspAI	GCGC	2 cut(s)	427, 1319
Kpn2I	TCCGGA	1 cut(s)	183
KspAI	GTTAAC	1 cut(s)	519
Kzo9I	GATC	3 cut(s)	161, 646, 969
LguI	GCTCTTC	1 cut(s)	634
LmnI	GCTCC	4 cut(s)	256, 296, 423, 868
Lsp1109I	GCAGC	4 cut(s)	814, 1067, 1316, 1400
LweI	GCATC	1 cut(s)	1223
MaeI	CTAG	3 cut(s)	816, 1130, 1516
MaeII	ACGT	1 cut(s)	1164
MaeIII	GTNAC	1 cut(s)	1294
MalI	GATC	3 cut(s)	163, 648, 971
MboI	GATC	3 cut(s)	161, 646, 969
MboII	GAAGA	7 cut(s)	364, 500, 503, 621, 979, 1339, 1463
MflI	RGATCY	1 cut(s)	646
MhlI	GDGCHC	4 cut(s)	657, 1170, 1289, 1508
MlsI	TGGCCA	1 cut(s)	836
MluCI	AATT	6 cut(s)	743, 822, 838, 1098, 1266, 1367
MluNI	TGGCCA	1 cut(s)	836
MlyI	GAGTC	1 cut(s)	548
Mox20I	TGGCCA	1 cut(s)	836
MroI	TCCGGA	1 cut(s)	183
MroXI	GAANNNNTTC	1 cut(s)	191
MscI	TGGCCA	1 cut(s)	836
MseI	TTAA	6 cut(s)	414, 518, 696, 821, 1277, 1409
MslI	CAYNNNNRTG	2 cut(s)	251, 1257
Msp20I	TGGCCA	1 cut(s)	836
MspA1I	CMGCKG	1 cut(s)	1307
MspCI	CTTAAG	1 cut(s)	695
MspI	CCGG	3 cut(s)	184, 346, 1014
MspR9I	CCNGG	4 cut(s)	154, 801, 1014, 1152
Mva1269I	GAATGC	1 cut(s)	1230
MvaI	CCWGG	3 cut(s)	154, 801, 1152
MwoI	GCNNNNNNNGC	5 cut(s)	424, 833, 1310, 1472, 1512
NciI	CCSGG	1 cut(s)	1014
NdeI	CATATG	1 cut(s)	24
NdeII	GATC	3 cut(s)	161, 646, 969
NlaIII	CATG	6 cut(s)	62, 256, 565, 771, 1080, 1238
NlaIV	GGNNCC	3 cut(s)	258, 298, 687
NmuCI	GTSAC	1 cut(s)	1294
NspI	RCATGY	1 cut(s)	565
OliI	CACNNNNGTG	1 cut(s)	1257
PagI	TCATGA	1 cut(s)	1234
PasI	CCCWGGG	1 cut(s)	153
PciSI	GCTCTTC	1 cut(s)	634
PctI	GAATGC	1 cut(s)	1230
PdmI	GAANNNNTTC	1 cut(s)	191
PfeI	GAWTC	3 cut(s)	587, 983, 1200
PkrI	GCNGC	4 cut(s)	829, 1082, 1306, 1390
PleI	GAGTC	1 cut(s)	548
PpsI	GAGTC	1 cut(s)	548
Psp6I	CCWGG	3 cut(s)	152, 799, 1150
PspGI	CCWGG	3 cut(s)	152, 799, 1150
PspN4I	GGNNCC	3 cut(s)	258, 298, 687
PspPI	GGNCC	2 cut(s)	794, 1045
PsrI	GAACNNNNNNTAC	2 cut(s)	1332, 1364
PstI	CTGCAG	1 cut(s)	1306
PsuI	RGATCY	1 cut(s)	646
PvuII	CAGCTG	1 cut(s)	1307
RseI	CAYNNNNRTG	2 cut(s)	251, 1257
SapI	GCTCTTC	1 cut(s)	634
SaqAI	TTAA	6 cut(s)	414, 518, 696, 821, 1277, 1409
SatI	GCNGC	4 cut(s)	828, 1081, 1305, 1389
Sau3AI	GATC	3 cut(s)	161, 646, 969
Sau96I	GGNCC	2 cut(s)	794, 1045
SchI	GAGTC	1 cut(s)	548
ScrFI	CCNGG	4 cut(s)	154, 801, 1014, 1152
SduI	GDGCHC	4 cut(s)	657, 1170, 1289, 1508
SfaNI	GCATC	1 cut(s)	1223
SfcI	CTRYAG	2 cut(s)	1302, 1308
SinI	GGWCC	1 cut(s)	794
SmiMI	CAYNNNNRTG	2 cut(s)	251, 1257
SmlI	CTYRAG	2 cut(s)	695, 845
SmoI	CTYRAG	2 cut(s)	695, 845
Sse9I	AATT	6 cut(s)	743, 822, 838, 1098, 1266, 1367
SsiI	CCGC	2 cut(s)	1005, 1083
SspMI	CTAG	3 cut(s)	816, 1130, 1516
StyD4I	CCNGG	4 cut(s)	152, 799, 1012, 1150
StyI	CCWWGG	1 cut(s)	1225
TaaI	ACNGT	3 cut(s)	470, 506, 676
TaiI	ACGT	1 cut(s)	1167
TaqI	TCGA	2 cut(s)	176, 1156
TaqII	GACCGA	1 cut(s)	1442
TasI	AATT	6 cut(s)	743, 822, 838, 1098, 1266, 1367
TfiI	GAWTC	3 cut(s)	587, 983, 1200
Tru1I	TTAA	6 cut(s)	414, 518, 696, 821, 1277, 1409
Tru9I	TTAA	6 cut(s)	414, 518, 696, 821, 1277, 1409
TscAI	CASTG	5 cut(s)	42, 253, 428, 681, 967
TseFI	GTSAC	1 cut(s)	1294
TseI	GCWGC	4 cut(s)	827, 1080, 1304, 1388
Tsp45I	GTSAC	1 cut(s)	1294
TspDTI	ATGAA	5 cut(s)	501, 1048, 1223, 1251, 1340
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	5 cut(s)	42, 253, 428, 681, 967
Vha464I	CTTAAG	1 cut(s)	695
VneI	GTGCAC	2 cut(s)	653, 1166
VpaK11BI	GGWCC	1 cut(s)	794
XapI	RAATTY	1 cut(s)	1367
XceI	RCATGY	1 cut(s)	565
XmiI	GTMKAC	2 cut(s)	288, 917
XmnI	GAANNNNTTC	1 cut(s)	191
XspI	CTAG	3 cut(s)	816, 1130, 1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.