Rmu_sc0001659.1_g000014

respiratory chain complex III assembly

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001659.1
Physical Location & Seq
Reverse (-)
56369 .. 57948
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001659.1_g000014.1.cds

Sequence Viewer

Length: 1437 bp
atgtttcctctcaatcccaaacatatgcctaaatcggtggcctccctaatatcagactatgcttcctccctaatctcagcctatgcttccattacagcattagggaagttgttccgtgcagttgtcaaagaacttaaagacctcattccccagtgggttagatcatacatatacttgaaacttcggaactacttctttaaacctcccccaaatgatcacctaactcttgtcataaaacagaccagcggcatagtgcttaacgaggtctatgagaaggtagatgtctaccttggagccaagattagtccctccgatacacgtcttgaactgagcaaaacataccggcaaaaaaccatcagccttaccattgaaaaaagaggccaagttgtcaaggacacctttgatgacattgagctccagtggcgctacatagccaaatcatataagtcctccaaaaccaacaatagtcctgctgctgatgatgaagaactgaaacatcacagtggctttgagttaacattcaataagaaacacaaatccaaagtgatggactcctacatgccctatgtgtttgctcaggctaattccattaggcaacgggaaaaggttctaaagctttattgctctgccaattatagttcatcaagaagtagcatagatcttgtgtaccctgctacttttgacacagtggcaatggaaccagaacttaagaaaatgattatagatgacttggataggtttctggagaggagagaattatataagaaggttgggaaggcatggaaaagaggatatttgttatacggtccacctggaaccggaaagtctagcttaattgcggccatagccaattatctcaagtttgatatatatgatttggagctttctagtattttcagcaactctgacctgagaagggtattgctgtgtactactaatcgttctattgtggtcattgaggatattgattgcagtgtgaagatcaacaatcgggaaacagctatgtcatctaaaacagcaacacccggttatcctgcaagcaagttcacactctcggtcctactgaacttcatagatggtctgtggtcatgctgcggcgatgagagaataattatcttcaccaccaaccacaaggacaaattagaccctgcactgttgcgtccaggtcgaatggacgtgcacattcacttgccatattgcactccaaatggattcagaaccttagcatctaattaccttggcattcatgaaagcaaccctcatcacatctgtggggaaattgaaagcttaatagagagcacagaggtcacccctgcagctctagctgaggcgcttatgaagagcgatgatgcggatgttgttcttgaagggcttgtcaaattcctcaaagaaaagaaggccgcagatgatgagttaaaaaaaggccaaaaaagctga

Protein Analysis

478

Amino Acids

54.13

Weight (kDa)

8.89

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 285
AciI CCGC 5 cut(s) 246, 839, 1095, 1352, 1401
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 1 cut(s) 1379
AfaI GTAC 2 cut(s) 668, 931
AfiI CCNNNNNNNGG 2 cut(s) 818, 916
AflII CTTAAG 1 cut(s) 707
AflIII ACRYGT 1 cut(s) 317
AgsI TTSAA 6 cut(s) 178, 326, 371, 523, 1283, 1367
AjiI CACGTC 2 cut(s) 320, 1177
AjnI CCWGG 2 cut(s) 811, 1162
AleI CACNNNNGTG 1 cut(s) 1269
AluBI AGCT 9 cut(s) 415, 616, 831, 883, 1001, 1287, 1319, 1325, 1434
AluI AGCT 9 cut(s) 415, 616, 831, 883, 1001, 1287, 1319, 1325, 1434
Alw21I GWGCWC 3 cut(s) 417, 1182, 1301
Alw44I GTGCAC 1 cut(s) 1178
AoxI GGCC 5 cut(s) 39, 379, 840, 1398, 1423
ApaLI GTGCAC 1 cut(s) 1178
ApeKI GCWGC 3 cut(s) 473, 1092, 1316
ApoI RAATTY 1 cut(s) 1379
Asp700I GAANNNNTTC 3 cut(s) 110, 191, 606
AspLEI GCGC 2 cut(s) 426, 1333
AspS9I GGNCC 2 cut(s) 806, 1057
AsuC2I CCSGG 1 cut(s) 1026
AsuHPI GGTGA 3 cut(s) 209, 1111, 1300
AvaII GGWCC 2 cut(s) 806, 1057
BaeGI GKGCMC 1 cut(s) 1182
BanII GRGCYC 1 cut(s) 417
Bbv12I GWGCWC 3 cut(s) 417, 1182, 1301
BbvCI CCTCAGC 1 cut(s) 1326
BbvI GCAGC 3 cut(s) 460, 1079, 1328
BccI CCATC 3 cut(s) 362, 541, 1070
BciT130I CCWGG 2 cut(s) 813, 1164
BclI TGATCA 1 cut(s) 214
BcnI CCSGG 1 cut(s) 1026
BfaI CTAG 3 cut(s) 828, 888, 1322
BfmI CTRYAG 1 cut(s) 1314
BfoI RGCGCY 2 cut(s) 427, 1334
BfrI CTTAAG 1 cut(s) 707
BglII AGATCT 1 cut(s) 658
BisI GCNGC 7 cut(s) 247, 474, 840, 1093, 1096, 1317, 1401
BlsI GCNGC 7 cut(s) 248, 475, 841, 1094, 1097, 1318, 1402
Bme1390I CCNGG 3 cut(s) 813, 1026, 1164
Bme18I GGWCC 2 cut(s) 806, 1057
BmgBI CACGTC 2 cut(s) 320, 1177
BmgT120I GGNCC 2 cut(s) 806, 1057
BmiI GGNNCC 3 cut(s) 295, 699, 817
BmrFI CCNGG 3 cut(s) 813, 1026, 1164
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 2 cut(s) 1235, 1339
BmuI ACTGGG 1 cut(s) 145
BpmI CTGGAG 2 cut(s) 401, 764
Bpu10I CCTNAGC 3 cut(s) 576, 1222, 1326
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 1 cut(s) 1026
BsaJI CCNNGG 2 cut(s) 289, 1237
BsaWI WCCGGW 1 cut(s) 818
Bsc4I CCNNNNNNNGG 2 cut(s) 818, 916
Bse118I RCCGGY 1 cut(s) 342
Bse1I ACTGG 2 cut(s) 151, 418
Bse3DI GCAATG 1 cut(s) 699
BseBI CCWGG 2 cut(s) 813, 1164
BseDI CCNNGG 2 cut(s) 289, 1237
BseGI GGATG 1 cut(s) 1360
BseLI CCNNNNNNNGG 2 cut(s) 818, 916
BseMI GCAATG 1 cut(s) 699
BseMII CTCAG 5 cut(s) 90, 320, 590, 902, 1317
BseNI ACTGG 2 cut(s) 151, 418
BseRI GAGGAG 1 cut(s) 763
BseSI GKGCMC 1 cut(s) 1182
BseXI GCAGC 3 cut(s) 460, 1079, 1328
BsgI GTGCAG 2 cut(s) 138, 1134
BshFI GGCC 5 cut(s) 41, 381, 842, 1400, 1425
BsiHKAI GWGCWC 3 cut(s) 417, 1182, 1301
BsiSI CCGG 3 cut(s) 343, 819, 1026
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 2 cut(s) 818, 916
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 1242
BsnI GGCC 5 cut(s) 41, 381, 842, 1400, 1425
Bsp1286I GDGCHC 3 cut(s) 417, 1182, 1301
Bsp143I GATC 4 cut(s) 161, 214, 658, 981
BspACI CCGC 5 cut(s) 246, 839, 1095, 1352, 1401
BspANI GGCC 5 cut(s) 41, 381, 842, 1400, 1425
BspCNI CTCAG 5 cut(s) 89, 321, 589, 903, 1318
BspHI TCATGA 1 cut(s) 1246
BspLI GGNNCC 3 cut(s) 295, 699, 817
BspMAI CTGCAG 1 cut(s) 1318
BspQI GCTCTTC 1 cut(s) 1334
BspTI CTTAAG 1 cut(s) 707
BsrDI GCAATG 1 cut(s) 699
BsrFI RCCGGY 1 cut(s) 342
BsrI ACTGG 2 cut(s) 151, 418
BssAI RCCGGY 1 cut(s) 342
BssECI CCNNGG 2 cut(s) 289, 1237
BssMI GATC 4 cut(s) 161, 214, 658, 981
BssT1I CCWWGG 2 cut(s) 289, 1237
Bst2UI CCWGG 2 cut(s) 813, 1164
Bst4CI ACNGT 4 cut(s) 503, 688, 806, 1155
Bst6I CTCTTC 1 cut(s) 1334
BstAFI CTTAAG 1 cut(s) 707
BstC8I GCNNGC 1 cut(s) 1039
BstDEI CTNAG 6 cut(s) 76, 329, 576, 911, 1222, 1326
BstEII GGTNACC 1 cut(s) 1306
BstF5I GGATG 1 cut(s) 1360
BstH2I RGCGCY 2 cut(s) 427, 1334
BstHHI GCGC 2 cut(s) 426, 1333
BstKTI GATC 4 cut(s) 164, 217, 661, 984
BstMBI GATC 4 cut(s) 161, 214, 658, 981
BstMWI GCNNNNNNNGC 4 cut(s) 421, 845, 1322, 1431
BstNI CCWGG 2 cut(s) 813, 1164
BstNSI RCATGY 1 cut(s) 562
BstPI GGTNACC 1 cut(s) 1306
BstSCI CCNGG 3 cut(s) 811, 1024, 1162
BstSFI CTRYAG 1 cut(s) 1314
BstSLI GKGCMC 1 cut(s) 1182
BstV1I GCAGC 3 cut(s) 460, 1079, 1328
BstX2I RGATCY 1 cut(s) 658
BstXI CCANNNNNNTGG 1 cut(s) 547
BstYI RGATCY 1 cut(s) 658
BsuRI GGCC 5 cut(s) 41, 381, 842, 1400, 1425
BtgZI GCGATG 2 cut(s) 1113, 1359
BtrI CACGTC 2 cut(s) 320, 1177
BtsCI GGATG 1 cut(s) 1360
BtsI GCAGTG 1 cut(s) 979
BtsIMutI CAGTG 6 cut(s) 158, 425, 508, 693, 979, 1151
Cac8I GCNNGC 1 cut(s) 1039
CciI TCATGA 1 cut(s) 1246
CfoI GCGC 2 cut(s) 426, 1333
Cfr10I RCCGGY 1 cut(s) 342
Cfr13I GGNCC 2 cut(s) 806, 1057
CseI GACGC 1 cut(s) 1148
Csp6I GTAC 2 cut(s) 667, 930
CviAII CATG 4 cut(s) 559, 780, 1089, 1247
CviQI GTAC 2 cut(s) 667, 930
DdeI CTNAG 6 cut(s) 76, 329, 576, 911, 1222, 1326
DpnI GATC 4 cut(s) 163, 216, 660, 983
DpnII GATC 4 cut(s) 161, 214, 658, 981
DraI TTTAAA 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 1 cut(s) 1334
EarI CTCTTC 1 cut(s) 1334
Ecl136II GAGCTC 1 cut(s) 415
Eco130I CCWWGG 2 cut(s) 289, 1237
Eco24I GRGCYC 1 cut(s) 417
Eco47I GGWCC 2 cut(s) 806, 1057
Eco53kI GAGCTC 1 cut(s) 415
Eco91I GGTNACC 1 cut(s) 1306
EcoICRI GAGCTC 1 cut(s) 415
EcoO65I GGTNACC 1 cut(s) 1306
EcoRII CCWGG 2 cut(s) 811, 1162
EcoT14I CCWWGG 2 cut(s) 289, 1237
EcoT38I GRGCYC 1 cut(s) 417
ErhI CCWWGG 2 cut(s) 289, 1237
FaeI CATG 4 cut(s) 562, 783, 1092, 1250
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 815, 847
FaqI GGGAC 1 cut(s) 291
FatI CATG 4 cut(s) 558, 779, 1088, 1246
FauNDI CATATG 1 cut(s) 24
FbaI TGATCA 1 cut(s) 214
FblI GTMKAC 1 cut(s) 285
Fnu4HI GCNGC 7 cut(s) 247, 474, 840, 1093, 1096, 1317, 1401
FokI GGATG 1 cut(s) 1367
FriOI GRGCYC 1 cut(s) 417
Fsp4HI GCNGC 7 cut(s) 247, 474, 840, 1093, 1096, 1317, 1401
FspBI CTAG 3 cut(s) 828, 888, 1322
GlaI GCGC 2 cut(s) 425, 1332
GluI GCNGC 7 cut(s) 247, 474, 840, 1093, 1096, 1317, 1401
GsuI CTGGAG 2 cut(s) 401, 764
HaeII RGCGCY 2 cut(s) 427, 1334
HaeIII GGCC 5 cut(s) 41, 381, 842, 1400, 1425
HapII CCGG 3 cut(s) 343, 819, 1026
HgaI GACGC 1 cut(s) 1148
HhaI GCGC 2 cut(s) 426, 1333
Hin1II CATG 4 cut(s) 562, 783, 1092, 1250
Hin6I GCGC 2 cut(s) 424, 1331
HinP1I GCGC 2 cut(s) 424, 1331
HincII GTYRAC 1 cut(s) 516
HindII GTYRAC 1 cut(s) 516
HindIII AAGCTT 2 cut(s) 614, 1285
HinfI GANTC 2 cut(s) 551, 1212
HpaI GTTAAC 1 cut(s) 516
HpaII CCGG 3 cut(s) 343, 819, 1026
HphI GGTGA 3 cut(s) 209, 1111, 1300
Hpy166II GTNNAC 7 cut(s) 286, 516, 667, 809, 930, 1047, 1180
Hpy188I TCNGA 5 cut(s) 55, 186, 313, 907, 1217
Hpy188III TCNNGA 6 cut(s) 323, 645, 743, 992, 1247, 1364
Hpy8I GTNNAC 7 cut(s) 286, 516, 667, 809, 930, 1047, 1180
HpyAV CCTTC 6 cut(s) 268, 760, 769, 909, 1361, 1390
HpyCH4III ACNGT 4 cut(s) 503, 688, 806, 1155
HpyCH4IV ACGT 2 cut(s) 319, 1176
HpyCH4V TGCA 7 cut(s) 119, 972, 1037, 1151, 1180, 1200, 1316
HpyF10VI GCNNNNNNNGC 4 cut(s) 421, 845, 1322, 1431
HpyF3I CTNAG 6 cut(s) 76, 329, 576, 911, 1222, 1326
HpySE526I ACGT 2 cut(s) 319, 1176
Hsp92II CATG 4 cut(s) 562, 783, 1092, 1250
HspAI GCGC 2 cut(s) 424, 1331
Ksp22I TGATCA 1 cut(s) 214
KspAI GTTAAC 1 cut(s) 516
Kzo9I GATC 4 cut(s) 161, 214, 658, 981
LguI GCTCTTC 1 cut(s) 1334
LmnI GCTCC 3 cut(s) 293, 420, 880
Lsp1109I GCAGC 3 cut(s) 460, 1079, 1328
LweI GCATC 2 cut(s) 1235, 1339
MaeI CTAG 3 cut(s) 828, 888, 1322
MaeII ACGT 2 cut(s) 319, 1176
MaeIII GTNAC 1 cut(s) 1306
MalI GATC 4 cut(s) 163, 216, 660, 983
MboI GATC 4 cut(s) 161, 214, 658, 981
MboII GAAGA 4 cut(s) 497, 991, 1108, 1351
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 3 cut(s) 417, 1182, 1301
MlyI GAGTC 1 cut(s) 545
MroXI GAANNNNTTC 3 cut(s) 110, 191, 606
MseI TTAA 8 cut(s) 135, 198, 258, 515, 708, 833, 1289, 1415
MslI CAYNNNNRTG 2 cut(s) 501, 1269
MspA1I CMGCKG 1 cut(s) 246
MspCI CTTAAG 1 cut(s) 707
MspI CCGG 3 cut(s) 343, 819, 1026
MspR9I CCNGG 3 cut(s) 813, 1026, 1164
Mva1269I GAATGC 1 cut(s) 1242
MvaI CCWGG 2 cut(s) 813, 1164
MwoI GCNNNNNNNGC 4 cut(s) 421, 845, 1322, 1431
NciI CCSGG 1 cut(s) 1026
NdeI CATATG 1 cut(s) 24
NdeII GATC 4 cut(s) 161, 214, 658, 981
NlaIII CATG 4 cut(s) 562, 783, 1092, 1250
NlaIV GGNNCC 3 cut(s) 295, 699, 817
NmuCI GTSAC 1 cut(s) 1306
NspI RCATGY 1 cut(s) 562
OliI CACNNNNGTG 1 cut(s) 1269
PagI TCATGA 1 cut(s) 1246
PciSI GCTCTTC 1 cut(s) 1334
PctI GAATGC 1 cut(s) 1242
PdmI GAANNNNTTC 3 cut(s) 110, 191, 606
PfeI GAWTC 1 cut(s) 1212
PkrI GCNGC 7 cut(s) 248, 475, 841, 1094, 1097, 1318, 1402
PleI GAGTC 1 cut(s) 545
PpsI GAGTC 1 cut(s) 545
Psp124BI GAGCTC 1 cut(s) 417
Psp6I CCWGG 2 cut(s) 811, 1162
PspEI GGTNACC 1 cut(s) 1306
PspGI CCWGG 2 cut(s) 811, 1162
PspN4I GGNNCC 3 cut(s) 295, 699, 817
PspPI GGNCC 2 cut(s) 806, 1057
PstI CTGCAG 1 cut(s) 1318
PsuI RGATCY 1 cut(s) 658
RsaI GTAC 2 cut(s) 668, 931
RsaNI GTAC 2 cut(s) 667, 930
RseI CAYNNNNRTG 2 cut(s) 501, 1269
SacI GAGCTC 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 1334
SaqAI TTAA 8 cut(s) 135, 198, 258, 515, 708, 833, 1289, 1415
SatI GCNGC 7 cut(s) 247, 474, 840, 1093, 1096, 1317, 1401
Sau3AI GATC 4 cut(s) 161, 214, 658, 981
Sau96I GGNCC 2 cut(s) 806, 1057
SchI GAGTC 1 cut(s) 545
ScrFI CCNGG 3 cut(s) 813, 1026, 1164
SduI GDGCHC 3 cut(s) 417, 1182, 1301
SfaNI GCATC 2 cut(s) 1235, 1339
SfcI CTRYAG 1 cut(s) 1314
SinI GGWCC 2 cut(s) 806, 1057
SmiMI CAYNNNNRTG 2 cut(s) 501, 1269
SmlI CTYRAG 2 cut(s) 707, 857
SmoI CTYRAG 2 cut(s) 707, 857
SsiI CCGC 5 cut(s) 246, 839, 1095, 1352, 1401
SspMI CTAG 3 cut(s) 828, 888, 1322
SstI GAGCTC 1 cut(s) 417
StyD4I CCNGG 3 cut(s) 811, 1024, 1162
StyI CCWWGG 2 cut(s) 289, 1237
TaaI ACNGT 4 cut(s) 503, 688, 806, 1155
TaiI ACGT 2 cut(s) 322, 1179
TaqI TCGA 1 cut(s) 1168
TaqII GACCGA 1 cut(s) 1045
TatI WGTACW 1 cut(s) 929
TauI GCSGC 4 cut(s) 249, 842, 1098, 1403
TfiI GAWTC 1 cut(s) 1212
Tru1I TTAA 8 cut(s) 135, 198, 258, 515, 708, 833, 1289, 1415
Tru9I TTAA 8 cut(s) 135, 198, 258, 515, 708, 833, 1289, 1415
TscAI CASTG 6 cut(s) 158, 425, 508, 693, 979, 1158
TseFI GTSAC 1 cut(s) 1306
TseI GCWGC 3 cut(s) 473, 1092, 1316
Tsp45I GTSAC 1 cut(s) 1306
TspDTI ATGAA 6 cut(s) 498, 630, 1060, 1235, 1263, 1352
TspGWI ACGGA 1 cut(s) 104
TspRI CASTG 6 cut(s) 158, 425, 508, 693, 979, 1158
Vha464I CTTAAG 1 cut(s) 707
VneI GTGCAC 1 cut(s) 1178
VpaK11BI GGWCC 2 cut(s) 806, 1057
XapI RAATTY 1 cut(s) 1379
XceI RCATGY 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 285
XmnI GAANNNNTTC 3 cut(s) 110, 191, 606
XspI CTAG 3 cut(s) 828, 888, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.