respiratory chain complex III assembly
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12713 FvH4_1g12717 FvH4_1g12718 FvH4_1g12719 FvH4_7g23320 |
| rosa_chinensis | RchiOBHm_Chr2g0100731 RchiOBHm_Chr2g0100741 RchiOBHm_Chr2g0100751 RchiOBHm_Chr2g0100761 RchiOBHm_Chr2g0100771 |
| rosa_laevigata | RLG00000017003 RLG00000017005 RLG00000017006 RLG00000017007 RLG00000017008 |
| rosa_multiflora | Rmu_sc0001659.1_g000011 Rmu_sc0001659.1_g000013 Rmu_sc0001659.1_g000014 Rmu_sc0001659.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00141880 Rroxscaffold_2G00141890 Rroxscaffold_2G00141900 Rroxscaffold_2G00141910 Rroxscaffold_2G00141920 |
| rosa_rugosa | Rorug02G0092200 Rorug02G0092300 Rorug02G0092400 Rorug02G0092500 |
| rosa_samantha | Rh2BG144600 Rh2BG144700 Rh2BG145000 Rh2BG145200 Rh2CG145600 Rh2CG145800 Rh2CG145900 Rh2CG146000 Rh2CG146100 Rh2DG145100 Rh2DG145300 Rh2DG145400 Rh2DG145500 Rh2DG145600 |
| rosa_wichuraiana | Rw2G010960 Rw2G010970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 285 |
| AciI | CCGC | 5 cut(s) | 246, 839, 1095, 1352, 1401 |
| AcoI | YGGCCR | 1 cut(s) | 840 |
| AcsI | RAATTY | 1 cut(s) | 1379 |
| AfaI | GTAC | 2 cut(s) | 668, 931 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 818, 916 |
| AflII | CTTAAG | 1 cut(s) | 707 |
| AflIII | ACRYGT | 1 cut(s) | 317 |
| AgsI | TTSAA | 6 cut(s) | 178, 326, 371, 523, 1283, 1367 |
| AjiI | CACGTC | 2 cut(s) | 320, 1177 |
| AjnI | CCWGG | 2 cut(s) | 811, 1162 |
| AleI | CACNNNNGTG | 1 cut(s) | 1269 |
| AluBI | AGCT | 9 cut(s) | 415, 616, 831, 883, 1001, 1287, 1319, 1325, 1434 |
| AluI | AGCT | 9 cut(s) | 415, 616, 831, 883, 1001, 1287, 1319, 1325, 1434 |
| Alw21I | GWGCWC | 3 cut(s) | 417, 1182, 1301 |
| Alw44I | GTGCAC | 1 cut(s) | 1178 |
| AoxI | GGCC | 5 cut(s) | 39, 379, 840, 1398, 1423 |
| ApaLI | GTGCAC | 1 cut(s) | 1178 |
| ApeKI | GCWGC | 3 cut(s) | 473, 1092, 1316 |
| ApoI | RAATTY | 1 cut(s) | 1379 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 110, 191, 606 |
| AspLEI | GCGC | 2 cut(s) | 426, 1333 |
| AspS9I | GGNCC | 2 cut(s) | 806, 1057 |
| AsuC2I | CCSGG | 1 cut(s) | 1026 |
| AsuHPI | GGTGA | 3 cut(s) | 209, 1111, 1300 |
| AvaII | GGWCC | 2 cut(s) | 806, 1057 |
| BaeGI | GKGCMC | 1 cut(s) | 1182 |
| BanII | GRGCYC | 1 cut(s) | 417 |
| Bbv12I | GWGCWC | 3 cut(s) | 417, 1182, 1301 |
| BbvCI | CCTCAGC | 1 cut(s) | 1326 |
| BbvI | GCAGC | 3 cut(s) | 460, 1079, 1328 |
| BccI | CCATC | 3 cut(s) | 362, 541, 1070 |
| BciT130I | CCWGG | 2 cut(s) | 813, 1164 |
| BclI | TGATCA | 1 cut(s) | 214 |
| BcnI | CCSGG | 1 cut(s) | 1026 |
| BfaI | CTAG | 3 cut(s) | 828, 888, 1322 |
| BfmI | CTRYAG | 1 cut(s) | 1314 |
| BfoI | RGCGCY | 2 cut(s) | 427, 1334 |
| BfrI | CTTAAG | 1 cut(s) | 707 |
| BglII | AGATCT | 1 cut(s) | 658 |
| BisI | GCNGC | 7 cut(s) | 247, 474, 840, 1093, 1096, 1317, 1401 |
| BlsI | GCNGC | 7 cut(s) | 248, 475, 841, 1094, 1097, 1318, 1402 |
| Bme1390I | CCNGG | 3 cut(s) | 813, 1026, 1164 |
| Bme18I | GGWCC | 2 cut(s) | 806, 1057 |
| BmgBI | CACGTC | 2 cut(s) | 320, 1177 |
| BmgT120I | GGNCC | 2 cut(s) | 806, 1057 |
| BmiI | GGNNCC | 3 cut(s) | 295, 699, 817 |
| BmrFI | CCNGG | 3 cut(s) | 813, 1026, 1164 |
| BmrI | ACTGGG | 1 cut(s) | 145 |
| BmsI | GCATC | 2 cut(s) | 1235, 1339 |
| BmuI | ACTGGG | 1 cut(s) | 145 |
| BpmI | CTGGAG | 2 cut(s) | 401, 764 |
| Bpu10I | CCTNAGC | 3 cut(s) | 576, 1222, 1326 |
| BpuEI | CTTGAG | 1 cut(s) | 842 |
| BpuMI | CCSGG | 1 cut(s) | 1026 |
| BsaJI | CCNNGG | 2 cut(s) | 289, 1237 |
| BsaWI | WCCGGW | 1 cut(s) | 818 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 818, 916 |
| Bse118I | RCCGGY | 1 cut(s) | 342 |
| Bse1I | ACTGG | 2 cut(s) | 151, 418 |
| Bse3DI | GCAATG | 1 cut(s) | 699 |
| BseBI | CCWGG | 2 cut(s) | 813, 1164 |
| BseDI | CCNNGG | 2 cut(s) | 289, 1237 |
| BseGI | GGATG | 1 cut(s) | 1360 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 818, 916 |
| BseMI | GCAATG | 1 cut(s) | 699 |
| BseMII | CTCAG | 5 cut(s) | 90, 320, 590, 902, 1317 |
| BseNI | ACTGG | 2 cut(s) | 151, 418 |
| BseRI | GAGGAG | 1 cut(s) | 763 |
| BseSI | GKGCMC | 1 cut(s) | 1182 |
| BseXI | GCAGC | 3 cut(s) | 460, 1079, 1328 |
| BsgI | GTGCAG | 2 cut(s) | 138, 1134 |
| BshFI | GGCC | 5 cut(s) | 41, 381, 842, 1400, 1425 |
| BsiHKAI | GWGCWC | 3 cut(s) | 417, 1182, 1301 |
| BsiSI | CCGG | 3 cut(s) | 343, 819, 1026 |
| BslFI | GGGAC | 1 cut(s) | 291 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 818, 916 |
| BsmFI | GGGAC | 1 cut(s) | 291 |
| BsmI | GAATGC | 1 cut(s) | 1242 |
| BsnI | GGCC | 5 cut(s) | 41, 381, 842, 1400, 1425 |
| Bsp1286I | GDGCHC | 3 cut(s) | 417, 1182, 1301 |
| Bsp143I | GATC | 4 cut(s) | 161, 214, 658, 981 |
| BspACI | CCGC | 5 cut(s) | 246, 839, 1095, 1352, 1401 |
| BspANI | GGCC | 5 cut(s) | 41, 381, 842, 1400, 1425 |
| BspCNI | CTCAG | 5 cut(s) | 89, 321, 589, 903, 1318 |
| BspHI | TCATGA | 1 cut(s) | 1246 |
| BspLI | GGNNCC | 3 cut(s) | 295, 699, 817 |
| BspMAI | CTGCAG | 1 cut(s) | 1318 |
| BspQI | GCTCTTC | 1 cut(s) | 1334 |
| BspTI | CTTAAG | 1 cut(s) | 707 |
| BsrDI | GCAATG | 1 cut(s) | 699 |
| BsrFI | RCCGGY | 1 cut(s) | 342 |
| BsrI | ACTGG | 2 cut(s) | 151, 418 |
| BssAI | RCCGGY | 1 cut(s) | 342 |
| BssECI | CCNNGG | 2 cut(s) | 289, 1237 |
| BssMI | GATC | 4 cut(s) | 161, 214, 658, 981 |
| BssT1I | CCWWGG | 2 cut(s) | 289, 1237 |
| Bst2UI | CCWGG | 2 cut(s) | 813, 1164 |
| Bst4CI | ACNGT | 4 cut(s) | 503, 688, 806, 1155 |
| Bst6I | CTCTTC | 1 cut(s) | 1334 |
| BstAFI | CTTAAG | 1 cut(s) | 707 |
| BstC8I | GCNNGC | 1 cut(s) | 1039 |
| BstDEI | CTNAG | 6 cut(s) | 76, 329, 576, 911, 1222, 1326 |
| BstEII | GGTNACC | 1 cut(s) | 1306 |
| BstF5I | GGATG | 1 cut(s) | 1360 |
| BstH2I | RGCGCY | 2 cut(s) | 427, 1334 |
| BstHHI | GCGC | 2 cut(s) | 426, 1333 |
| BstKTI | GATC | 4 cut(s) | 164, 217, 661, 984 |
| BstMBI | GATC | 4 cut(s) | 161, 214, 658, 981 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 421, 845, 1322, 1431 |
| BstNI | CCWGG | 2 cut(s) | 813, 1164 |
| BstNSI | RCATGY | 1 cut(s) | 562 |
| BstPI | GGTNACC | 1 cut(s) | 1306 |
| BstSCI | CCNGG | 3 cut(s) | 811, 1024, 1162 |
| BstSFI | CTRYAG | 1 cut(s) | 1314 |
| BstSLI | GKGCMC | 1 cut(s) | 1182 |
| BstV1I | GCAGC | 3 cut(s) | 460, 1079, 1328 |
| BstX2I | RGATCY | 1 cut(s) | 658 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 547 |
| BstYI | RGATCY | 1 cut(s) | 658 |
| BsuRI | GGCC | 5 cut(s) | 41, 381, 842, 1400, 1425 |
| BtgZI | GCGATG | 2 cut(s) | 1113, 1359 |
| BtrI | CACGTC | 2 cut(s) | 320, 1177 |
| BtsCI | GGATG | 1 cut(s) | 1360 |
| BtsI | GCAGTG | 1 cut(s) | 979 |
| BtsIMutI | CAGTG | 6 cut(s) | 158, 425, 508, 693, 979, 1151 |
| Cac8I | GCNNGC | 1 cut(s) | 1039 |
| CciI | TCATGA | 1 cut(s) | 1246 |
| CfoI | GCGC | 2 cut(s) | 426, 1333 |
| Cfr10I | RCCGGY | 1 cut(s) | 342 |
| Cfr13I | GGNCC | 2 cut(s) | 806, 1057 |
| CseI | GACGC | 1 cut(s) | 1148 |
| Csp6I | GTAC | 2 cut(s) | 667, 930 |
| CviAII | CATG | 4 cut(s) | 559, 780, 1089, 1247 |
| CviQI | GTAC | 2 cut(s) | 667, 930 |
| DdeI | CTNAG | 6 cut(s) | 76, 329, 576, 911, 1222, 1326 |
| DpnI | GATC | 4 cut(s) | 163, 216, 660, 983 |
| DpnII | GATC | 4 cut(s) | 161, 214, 658, 981 |
| DraI | TTTAAA | 1 cut(s) | 199 |
| EaeI | YGGCCR | 1 cut(s) | 840 |
| Eam1104I | CTCTTC | 1 cut(s) | 1334 |
| EarI | CTCTTC | 1 cut(s) | 1334 |
| Ecl136II | GAGCTC | 1 cut(s) | 415 |
| Eco130I | CCWWGG | 2 cut(s) | 289, 1237 |
| Eco24I | GRGCYC | 1 cut(s) | 417 |
| Eco47I | GGWCC | 2 cut(s) | 806, 1057 |
| Eco53kI | GAGCTC | 1 cut(s) | 415 |
| Eco91I | GGTNACC | 1 cut(s) | 1306 |
| EcoICRI | GAGCTC | 1 cut(s) | 415 |
| EcoO65I | GGTNACC | 1 cut(s) | 1306 |
| EcoRII | CCWGG | 2 cut(s) | 811, 1162 |
| EcoT14I | CCWWGG | 2 cut(s) | 289, 1237 |
| EcoT38I | GRGCYC | 1 cut(s) | 417 |
| ErhI | CCWWGG | 2 cut(s) | 289, 1237 |
| FaeI | CATG | 4 cut(s) | 562, 783, 1092, 1250 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 383, 415, 815, 847 |
| FaqI | GGGAC | 1 cut(s) | 291 |
| FatI | CATG | 4 cut(s) | 558, 779, 1088, 1246 |
| FauNDI | CATATG | 1 cut(s) | 24 |
| FbaI | TGATCA | 1 cut(s) | 214 |
| FblI | GTMKAC | 1 cut(s) | 285 |
| Fnu4HI | GCNGC | 7 cut(s) | 247, 474, 840, 1093, 1096, 1317, 1401 |
| FokI | GGATG | 1 cut(s) | 1367 |
| FriOI | GRGCYC | 1 cut(s) | 417 |
| Fsp4HI | GCNGC | 7 cut(s) | 247, 474, 840, 1093, 1096, 1317, 1401 |
| FspBI | CTAG | 3 cut(s) | 828, 888, 1322 |
| GlaI | GCGC | 2 cut(s) | 425, 1332 |
| GluI | GCNGC | 7 cut(s) | 247, 474, 840, 1093, 1096, 1317, 1401 |
| GsuI | CTGGAG | 2 cut(s) | 401, 764 |
| HaeII | RGCGCY | 2 cut(s) | 427, 1334 |
| HaeIII | GGCC | 5 cut(s) | 41, 381, 842, 1400, 1425 |
| HapII | CCGG | 3 cut(s) | 343, 819, 1026 |
| HgaI | GACGC | 1 cut(s) | 1148 |
| HhaI | GCGC | 2 cut(s) | 426, 1333 |
| Hin1II | CATG | 4 cut(s) | 562, 783, 1092, 1250 |
| Hin6I | GCGC | 2 cut(s) | 424, 1331 |
| HinP1I | GCGC | 2 cut(s) | 424, 1331 |
| HincII | GTYRAC | 1 cut(s) | 516 |
| HindII | GTYRAC | 1 cut(s) | 516 |
| HindIII | AAGCTT | 2 cut(s) | 614, 1285 |
| HinfI | GANTC | 2 cut(s) | 551, 1212 |
| HpaI | GTTAAC | 1 cut(s) | 516 |
| HpaII | CCGG | 3 cut(s) | 343, 819, 1026 |
| HphI | GGTGA | 3 cut(s) | 209, 1111, 1300 |
| Hpy166II | GTNNAC | 7 cut(s) | 286, 516, 667, 809, 930, 1047, 1180 |
| Hpy188I | TCNGA | 5 cut(s) | 55, 186, 313, 907, 1217 |
| Hpy188III | TCNNGA | 6 cut(s) | 323, 645, 743, 992, 1247, 1364 |
| Hpy8I | GTNNAC | 7 cut(s) | 286, 516, 667, 809, 930, 1047, 1180 |
| HpyAV | CCTTC | 6 cut(s) | 268, 760, 769, 909, 1361, 1390 |
| HpyCH4III | ACNGT | 4 cut(s) | 503, 688, 806, 1155 |
| HpyCH4IV | ACGT | 2 cut(s) | 319, 1176 |
| HpyCH4V | TGCA | 7 cut(s) | 119, 972, 1037, 1151, 1180, 1200, 1316 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 421, 845, 1322, 1431 |
| HpyF3I | CTNAG | 6 cut(s) | 76, 329, 576, 911, 1222, 1326 |
| HpySE526I | ACGT | 2 cut(s) | 319, 1176 |
| Hsp92II | CATG | 4 cut(s) | 562, 783, 1092, 1250 |
| HspAI | GCGC | 2 cut(s) | 424, 1331 |
| Ksp22I | TGATCA | 1 cut(s) | 214 |
| KspAI | GTTAAC | 1 cut(s) | 516 |
| Kzo9I | GATC | 4 cut(s) | 161, 214, 658, 981 |
| LguI | GCTCTTC | 1 cut(s) | 1334 |
| LmnI | GCTCC | 3 cut(s) | 293, 420, 880 |
| Lsp1109I | GCAGC | 3 cut(s) | 460, 1079, 1328 |
| LweI | GCATC | 2 cut(s) | 1235, 1339 |
| MaeI | CTAG | 3 cut(s) | 828, 888, 1322 |
| MaeII | ACGT | 2 cut(s) | 319, 1176 |
| MaeIII | GTNAC | 1 cut(s) | 1306 |
| MalI | GATC | 4 cut(s) | 163, 216, 660, 983 |
| MboI | GATC | 4 cut(s) | 161, 214, 658, 981 |
| MboII | GAAGA | 4 cut(s) | 497, 991, 1108, 1351 |
| MflI | RGATCY | 1 cut(s) | 658 |
| MhlI | GDGCHC | 3 cut(s) | 417, 1182, 1301 |
| MlyI | GAGTC | 1 cut(s) | 545 |
| MroXI | GAANNNNTTC | 3 cut(s) | 110, 191, 606 |
| MseI | TTAA | 8 cut(s) | 135, 198, 258, 515, 708, 833, 1289, 1415 |
| MslI | CAYNNNNRTG | 2 cut(s) | 501, 1269 |
| MspA1I | CMGCKG | 1 cut(s) | 246 |
| MspCI | CTTAAG | 1 cut(s) | 707 |
| MspI | CCGG | 3 cut(s) | 343, 819, 1026 |
| MspR9I | CCNGG | 3 cut(s) | 813, 1026, 1164 |
| Mva1269I | GAATGC | 1 cut(s) | 1242 |
| MvaI | CCWGG | 2 cut(s) | 813, 1164 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 421, 845, 1322, 1431 |
| NciI | CCSGG | 1 cut(s) | 1026 |
| NdeI | CATATG | 1 cut(s) | 24 |
| NdeII | GATC | 4 cut(s) | 161, 214, 658, 981 |
| NlaIII | CATG | 4 cut(s) | 562, 783, 1092, 1250 |
| NlaIV | GGNNCC | 3 cut(s) | 295, 699, 817 |
| NmuCI | GTSAC | 1 cut(s) | 1306 |
| NspI | RCATGY | 1 cut(s) | 562 |
| OliI | CACNNNNGTG | 1 cut(s) | 1269 |
| PagI | TCATGA | 1 cut(s) | 1246 |
| PciSI | GCTCTTC | 1 cut(s) | 1334 |
| PctI | GAATGC | 1 cut(s) | 1242 |
| PdmI | GAANNNNTTC | 3 cut(s) | 110, 191, 606 |
| PfeI | GAWTC | 1 cut(s) | 1212 |
| PkrI | GCNGC | 7 cut(s) | 248, 475, 841, 1094, 1097, 1318, 1402 |
| PleI | GAGTC | 1 cut(s) | 545 |
| PpsI | GAGTC | 1 cut(s) | 545 |
| Psp124BI | GAGCTC | 1 cut(s) | 417 |
| Psp6I | CCWGG | 2 cut(s) | 811, 1162 |
| PspEI | GGTNACC | 1 cut(s) | 1306 |
| PspGI | CCWGG | 2 cut(s) | 811, 1162 |
| PspN4I | GGNNCC | 3 cut(s) | 295, 699, 817 |
| PspPI | GGNCC | 2 cut(s) | 806, 1057 |
| PstI | CTGCAG | 1 cut(s) | 1318 |
| PsuI | RGATCY | 1 cut(s) | 658 |
| RsaI | GTAC | 2 cut(s) | 668, 931 |
| RsaNI | GTAC | 2 cut(s) | 667, 930 |
| RseI | CAYNNNNRTG | 2 cut(s) | 501, 1269 |
| SacI | GAGCTC | 1 cut(s) | 417 |
| SapI | GCTCTTC | 1 cut(s) | 1334 |
| SaqAI | TTAA | 8 cut(s) | 135, 198, 258, 515, 708, 833, 1289, 1415 |
| SatI | GCNGC | 7 cut(s) | 247, 474, 840, 1093, 1096, 1317, 1401 |
| Sau3AI | GATC | 4 cut(s) | 161, 214, 658, 981 |
| Sau96I | GGNCC | 2 cut(s) | 806, 1057 |
| SchI | GAGTC | 1 cut(s) | 545 |
| ScrFI | CCNGG | 3 cut(s) | 813, 1026, 1164 |
| SduI | GDGCHC | 3 cut(s) | 417, 1182, 1301 |
| SfaNI | GCATC | 2 cut(s) | 1235, 1339 |
| SfcI | CTRYAG | 1 cut(s) | 1314 |
| SinI | GGWCC | 2 cut(s) | 806, 1057 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 501, 1269 |
| SmlI | CTYRAG | 2 cut(s) | 707, 857 |
| SmoI | CTYRAG | 2 cut(s) | 707, 857 |
| SsiI | CCGC | 5 cut(s) | 246, 839, 1095, 1352, 1401 |
| SspMI | CTAG | 3 cut(s) | 828, 888, 1322 |
| SstI | GAGCTC | 1 cut(s) | 417 |
| StyD4I | CCNGG | 3 cut(s) | 811, 1024, 1162 |
| StyI | CCWWGG | 2 cut(s) | 289, 1237 |
| TaaI | ACNGT | 4 cut(s) | 503, 688, 806, 1155 |
| TaiI | ACGT | 2 cut(s) | 322, 1179 |
| TaqI | TCGA | 1 cut(s) | 1168 |
| TaqII | GACCGA | 1 cut(s) | 1045 |
| TatI | WGTACW | 1 cut(s) | 929 |
| TauI | GCSGC | 4 cut(s) | 249, 842, 1098, 1403 |
| TfiI | GAWTC | 1 cut(s) | 1212 |
| Tru1I | TTAA | 8 cut(s) | 135, 198, 258, 515, 708, 833, 1289, 1415 |
| Tru9I | TTAA | 8 cut(s) | 135, 198, 258, 515, 708, 833, 1289, 1415 |
| TscAI | CASTG | 6 cut(s) | 158, 425, 508, 693, 979, 1158 |
| TseFI | GTSAC | 1 cut(s) | 1306 |
| TseI | GCWGC | 3 cut(s) | 473, 1092, 1316 |
| Tsp45I | GTSAC | 1 cut(s) | 1306 |
| TspDTI | ATGAA | 6 cut(s) | 498, 630, 1060, 1235, 1263, 1352 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| TspRI | CASTG | 6 cut(s) | 158, 425, 508, 693, 979, 1158 |
| Vha464I | CTTAAG | 1 cut(s) | 707 |
| VneI | GTGCAC | 1 cut(s) | 1178 |
| VpaK11BI | GGWCC | 2 cut(s) | 806, 1057 |
| XapI | RAATTY | 1 cut(s) | 1379 |
| XceI | RCATGY | 1 cut(s) | 562 |
| XmiI | GTMKAC | 1 cut(s) | 285 |
| XmnI | GAANNNNTTC | 3 cut(s) | 110, 191, 606 |
| XspI | CTAG | 3 cut(s) | 828, 888, 1322 |