Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002147

Physical Location & Seq

Genomic Coordinates Reverse (-)

12484215 .. 12487169

Gene Structure 2955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG144600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGTTTCCTCTCAATCCCAACCACTTGCCCAAATCAGTGTCCTCCCTCTTCTCAGCCTACGCTTCCTTCACAGCATTCAAGTTCTTGATCCAGACCGTTGTCAATGAGCTCAAAGAGTTCATTCCCCCCTGGGTTCGATCATACATATACTCAAAGCTTCGAAAATACTTCTTCAAACCTCGCCCAAACGATAAGCTCACTCTTGTCATCAACAAGAACATCGGCATGGCGCCCAACGAAGTCTACGACAAGGTGGAGGTCTACCTCGGATCCAAGATTAGTCCCTCCGATTCGCGACTCGAACTGAGCAAGACGAGCAAGCAGAAGAGTGTCAGCCTCGCCATTGAGAAAAGAGGCCAAGATGTTCAGGACACATTCGATGACATTGAGCTCCGGTGGACCTACGTGGCCAAATCATCAAAGAAGTGCAGACCCAATAAGTTCACGCCTCCTGGTGATGATGGAGAAGAGGAATCTCACTACTGGAGCTTTGAGTTAAGTTTCGATAAGAAACACAGAGCCCAAGTGATAGACTCCTACATGCCCTATGTCCTTGCTCAAGCTGAGTCCATCAAACAAGGGGAAAGGGTTCTGAAGCTTCATAGCACCGGCAGGGAACAATATGGGCCATCCAAGAGTTGCATAGATCTCGTGCACCCTGCAACTTTCGAGACGATGGCAATGGATCCAGAACTCAAGAAGATGATTATAGATGACTTGGATAGGTTCGTCAAGAGAAGGGAGTTGTATAAGAAGGTTGGCAAGGCTTGGAAGAGAGGGTATTTGTTGTATGGTCCACCCGGTACTGGAAAATCGAGCTTGATTGCAGCCATGGCAAATTATCTCAAGTTTGATATATATGATCTGGAGCTTTCTAGCATTTACGGCGACTCTGAATTGAGGAGGGTTTTACTTTCTACATCAAATCGTTCTATTGTGGTCGTGGAGGACATTGATTGCAGTGTGCAAATCAAAAATCGGGAATCAGCTCAGCCTTCTAAAATCCCACCAACTCATGCAAGCAGGGACTGCAAGTTCACCCTATCGGGTCTACTGAACTTCATAGATGGTCTGTGGTCGTGCTGCGGCGATGAACGAATAATTGTGTTCACCACCAACCACAAGGAGAGACTAGACCCTGCATTGTTGCGTCCTGGTCGAATGGACTTGCACATTCACTTGTCATATTGCACCCCAAGTGGGTTCAGAATCTTAGCCTCTAACTACCTTGGCATTCATGAAAGCAGCCCTCATCACCTCTTTGGAGAAATTGAAAGCTTAATAGAGAGCACAGAGGTCACCCCTGCAGCTGTAGCTGAGGAGCTTATGAAGAGTGATGATGCAGATGTTGTTCTAGAAGGGCTTGTCAAATTCCTCAAAGAAAAGAAGGCCGCAGATGATAAAATGAAGTCAAAAAAGGCTAAAAAAGCTGAGCAGGAAAGGATGAAGAAAGCAGAGGAGGAAGGGAGTAAAAGTGGAGAGGAGGAAGGGACTAATAAAGCAGAGGTGGAAGGGAGTAAAAAAGGAAATGAGGAAGCCACTAAGAAAGCAGAGAGTCAGGAAAGGGATGAGGATGTGAACACAAACTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

530

Amino Acids

60.1

Weight (kDa)

7.57

Isoelectric Point (pI)

48.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	41 - 136	3.4e-19	Domain associated at C-terminal with AAA
AAA	PF00004	261 - 395	4.3e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	397 - 469	3e-24	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002147)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12713 FvH4_1g12717 FvH4_1g12718 FvH4_1g12719 FvH4_7g23320
rosa_chinensis	RchiOBHm_Chr2g0100731 RchiOBHm_Chr2g0100741 RchiOBHm_Chr2g0100751 RchiOBHm_Chr2g0100761 RchiOBHm_Chr2g0100771
rosa_laevigata	RLG00000017003 RLG00000017005 RLG00000017006 RLG00000017007 RLG00000017008
rosa_multiflora	Rmu_sc0001659.1_g000011 Rmu_sc0001659.1_g000013 Rmu_sc0001659.1_g000014 Rmu_sc0001659.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141880 Rroxscaffold_2G00141890 Rroxscaffold_2G00141900 Rroxscaffold_2G00141910 Rroxscaffold_2G00141920
rosa_rugosa	Rorug02G0092200 Rorug02G0092300 Rorug02G0092400 Rorug02G0092500
rosa_samantha	Rh2BG144600 Rh2BG144700 Rh2BG145000 Rh2BG145200 Rh2CG145600 Rh2CG145800 Rh2CG145900 Rh2CG146000 Rh2CG146100 Rh2DG145100 Rh2DG145300 Rh2DG145400 Rh2DG145500 Rh2DG145600
rosa_wichuraiana	Rw2G010960 Rw2G010970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	229
AccI	GTMKAC	3 cut(s)	243, 261, 1051
AccII	CGCG	1 cut(s)	295
AciI	CCGC	2 cut(s)	1086, 1392
AclWI	GGATC	5 cut(s)	82, 264, 277, 680, 693
AcoI	YGGCCR	1 cut(s)	408
AcsI	RAATTY	1 cut(s)	1370
AcuI	CTGAAG	1 cut(s)	614
AcyI	GRCGYC	1 cut(s)	230
AfaI	GTAC	1 cut(s)	805
AfiI	CCNNNNNNNGG	2 cut(s)	806, 1200
AgsI	TTSAA	3 cut(s)	79, 175, 1274
AjnI	CCWGG	3 cut(s)	128, 451, 1153
AloI	GAACNNNNNNTCC	2 cut(s)	1019, 1051
Alw21I	GWGCWC	4 cut(s)	111, 393, 657, 1292
Alw26I	GTCTC	2 cut(s)	665, 1123
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	5 cut(s)	82, 264, 277, 680, 693
AlwNI	CAGNNNCTG	1 cut(s)	1029
AoxI	GGCC	4 cut(s)	355, 408, 626, 1389
ApaLI	GTGCAC	1 cut(s)	653
ApeKI	GCWGC	4 cut(s)	827, 1083, 1245, 1307
ApoI	RAATTY	1 cut(s)	1370
Asp700I	GAANNNNTTC	1 cut(s)	588
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	3 cut(s)	399, 626, 794
AsuC2I	CCSGG	1 cut(s)	801
AsuHPI	GGTGA	5 cut(s)	467, 1030, 1102, 1247, 1291
AsuII	TTCGAA	1 cut(s)	160
AvaII	GGWCC	2 cut(s)	399, 794
BaeGI	GKGCMC	1 cut(s)	657
BalI	TGGCCA	1 cut(s)	410
BamHI	GGATCC	2 cut(s)	269, 685
BanI	GGYRCC	1 cut(s)	229
BanII	GRGCYC	3 cut(s)	111, 393, 523
BauI	CACGAG	1 cut(s)	650
Bbv12I	GWGCWC	4 cut(s)	111, 393, 657, 1292
BbvCI	CCTCAGC	1 cut(s)	1317
BbvI	GCAGC	4 cut(s)	839, 1070, 1257, 1319
BccI	CCATC	5 cut(s)	455, 578, 637, 670, 1061
BceAI	ACGGC	1 cut(s)	901
BcgI	CGANNNNNNTGC	2 cut(s)	631, 665
BciT130I	CCWGG	3 cut(s)	130, 453, 1155
BcnI	CCSGG	1 cut(s)	801
BcoDI	GTCTC	2 cut(s)	665, 1123
BfaI	CTAG	4 cut(s)	876, 1133, 1355, 1591
BfmI	CTRYAG	2 cut(s)	1305, 1311
BfoI	RGCGCY	1 cut(s)	233
BglII	AGATCT	1 cut(s)	646
BisI	GCNGC	6 cut(s)	828, 1084, 1087, 1246, 1308, 1392
BlpI	GCTNAGC	2 cut(s)	990, 1431
BlsI	GCNGC	6 cut(s)	829, 1085, 1088, 1247, 1309, 1393
Bme1390I	CCNGG	4 cut(s)	130, 453, 801, 1155
Bme18I	GGWCC	2 cut(s)	399, 794
BmgT120I	GGNCC	3 cut(s)	399, 626, 794
BmiI	GGNNCC	3 cut(s)	231, 271, 687
BmrFI	CCNGG	4 cut(s)	130, 453, 801, 1155
BmsI	GCATC	1 cut(s)	1330
BoxI	GACNNNNGTC	1 cut(s)	98
BpmI	CTGGAG	2 cut(s)	505, 887
Bpu10I	CCTNAGC	1 cut(s)	1317
Bpu1102I	GCTNAGC	2 cut(s)	990, 1431
Bpu14I	TTCGAA	1 cut(s)	160
BpuEI	CTTGAG	3 cut(s)	543, 680, 830
BpuMI	CCSGG	1 cut(s)	801
BsaAI	YACGTR	1 cut(s)	406
BsaHI	GRCGYC	1 cut(s)	230
BsaJI	CCNNGG	5 cut(s)	128, 129, 265, 831, 1228
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	2 cut(s)	1459, 1489
Bsc4I	CCNNNNNNNGG	2 cut(s)	806, 1200
Bse118I	RCCGGY	1 cut(s)	608
Bse1I	ACTGG	2 cut(s)	488, 811
Bse3DI	GCAATG	1 cut(s)	687
BseBI	CCWGG	3 cut(s)	130, 453, 1155
BseDI	CCNNGG	5 cut(s)	128, 129, 265, 831, 1228
BseGI	GGATG	4 cut(s)	629, 1449, 1573, 1579
BseLI	CCNNNNNNNGG	2 cut(s)	806, 1200
BseMI	GCAATG	1 cut(s)	687
BseMII	CTCAG	6 cut(s)	66, 296, 555, 1004, 1308, 1422
BseNI	ACTGG	2 cut(s)	488, 811
BseRI	GAGGAG	4 cut(s)	916, 1334, 1472, 1496
BseSI	GKGCMC	1 cut(s)	657
BseXI	GCAGC	4 cut(s)	839, 1070, 1257, 1319
BsgI	GTGCAG	1 cut(s)	448
Bsh1236I	CGCG	1 cut(s)	295
BshFI	GGCC	4 cut(s)	357, 410, 628, 1391
BshNI	GGYRCC	1 cut(s)	229
BsiHKAI	GWGCWC	4 cut(s)	111, 393, 657, 1292
BsiSI	CCGG	3 cut(s)	394, 609, 801
BslFI	GGGAC	3 cut(s)	267, 1040, 1504
BslI	CCNNNNNNNGG	2 cut(s)	806, 1200
BsmAI	GTCTC	2 cut(s)	665, 1123
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	3 cut(s)	267, 1040, 1504
BsmI	GAATGC	2 cut(s)	74, 1233
BsnI	GGCC	4 cut(s)	357, 410, 628, 1391
Bsp119I	TTCGAA	1 cut(s)	160
Bsp1286I	GDGCHC	5 cut(s)	111, 393, 523, 657, 1292
Bsp143I	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
Bsp1720I	GCTNAGC	2 cut(s)	990, 1431
Bsp19I	CCATGG	1 cut(s)	831
Bsp68I	TCGCGA	1 cut(s)	295
BspACI	CCGC	2 cut(s)	1086, 1392
BspANI	GGCC	4 cut(s)	357, 410, 628, 1391
BspCNI	CTCAG	6 cut(s)	65, 297, 556, 1003, 1309, 1423
BspFNI	CGCG	1 cut(s)	295
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	3 cut(s)	231, 271, 687
BspMAI	CTGCAG	1 cut(s)	1309
BspPI	GGATC	5 cut(s)	82, 264, 277, 680, 693
BspT104I	TTCGAA	1 cut(s)	160
BspT107I	GGYRCC	1 cut(s)	229
BsrDI	GCAATG	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	608
BsrI	ACTGG	2 cut(s)	488, 811
BssAI	RCCGGY	1 cut(s)	608
BssECI	CCNNGG	5 cut(s)	128, 129, 265, 831, 1228
BssMI	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
BssNI	GRCGYC	1 cut(s)	230
BssSI	CACGAG	1 cut(s)	650
BssT1I	CCWWGG	2 cut(s)	831, 1228
Bst2BI	CACGAG	1 cut(s)	650
Bst2UI	CCWGG	3 cut(s)	130, 453, 1155
Bst4CI	ACNGT	1 cut(s)	97
Bst6I	CTCTTC	5 cut(s)	53, 320, 462, 767, 1325
BstACI	GRCGYC	1 cut(s)	230
BstAPI	GCANNNNNTGC	1 cut(s)	1029
BstBAI	YACGTR	1 cut(s)	406
BstBI	TTCGAA	1 cut(s)	160
BstC8I	GCNNGC	2 cut(s)	320, 1021
BstDEI	CTNAG	8 cut(s)	52, 305, 564, 990, 1213, 1317, 1431, 1542
BstDSI	CCRYGG	1 cut(s)	831
BstEII	GGTNACC	1 cut(s)	1297
BstF5I	GGATG	4 cut(s)	629, 1449, 1573, 1579
BstFNI	CGCG	1 cut(s)	295
BstH2I	RGCGCY	1 cut(s)	233
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	6 cut(s)	90, 140, 272, 649, 688, 865
BstMAI	GTCTC	2 cut(s)	665, 1123
BstMBI	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
BstMWI	GCNNNNNNNGC	6 cut(s)	315, 833, 885, 1029, 1313, 1427
BstNI	CCWGG	3 cut(s)	130, 453, 1155
BstNSI	RCATGY	1 cut(s)	544
BstPAI	GACNNNNGTC	1 cut(s)	98
BstPI	GGTNACC	1 cut(s)	1297
BstSCI	CCNGG	4 cut(s)	128, 451, 799, 1153
BstSFI	CTRYAG	2 cut(s)	1305, 1311
BstSLI	GKGCMC	1 cut(s)	657
BstUI	CGCG	1 cut(s)	295
BstV1I	GCAGC	4 cut(s)	839, 1070, 1257, 1319
BstX2I	RGATCY	3 cut(s)	269, 646, 685
BstYI	RGATCY	3 cut(s)	269, 646, 685
BsuRI	GGCC	4 cut(s)	357, 410, 628, 1391
BtgI	CCRYGG	1 cut(s)	831
BtgZI	GCGATG	1 cut(s)	1104
BtsCI	GGATG	4 cut(s)	629, 1449, 1573, 1579
BtsI	GCAGTG	1 cut(s)	967
BtsIMutI	CAGTG	2 cut(s)	42, 967
BtuMI	TCGCGA	1 cut(s)	295
Cac8I	GCNNGC	2 cut(s)	320, 1021
CaiI	CAGNNNCTG	1 cut(s)	1029
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	1 cut(s)	608
Cfr13I	GGNCC	3 cut(s)	399, 626, 794
CseI	GACGC	1 cut(s)	1139
Csp6I	GTAC	1 cut(s)	804
CviAII	CATG	5 cut(s)	226, 541, 832, 1016, 1238
CviQI	GTAC	1 cut(s)	804
DdeI	CTNAG	8 cut(s)	52, 305, 564, 990, 1213, 1317, 1431, 1542
DinI	GGCGCC	1 cut(s)	231
DpnI	GATC	6 cut(s)	89, 139, 271, 648, 687, 864
DpnII	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
EaeI	YGGCCR	1 cut(s)	408
Eam1104I	CTCTTC	5 cut(s)	53, 320, 462, 767, 1325
EarI	CTCTTC	5 cut(s)	53, 320, 462, 767, 1325
Ecl136II	GAGCTC	2 cut(s)	109, 391
Eco130I	CCWWGG	2 cut(s)	831, 1228
Eco24I	GRGCYC	3 cut(s)	111, 393, 523
Eco47I	GGWCC	2 cut(s)	399, 794
Eco53kI	GAGCTC	2 cut(s)	109, 391
Eco57I	CTGAAG	1 cut(s)	614
Eco91I	GGTNACC	1 cut(s)	1297
EcoICRI	GAGCTC	2 cut(s)	109, 391
EcoO65I	GGTNACC	1 cut(s)	1297
EcoRII	CCWGG	3 cut(s)	128, 451, 1153
EcoT14I	CCWWGG	2 cut(s)	831, 1228
EcoT38I	GRGCYC	3 cut(s)	111, 393, 523
EgeI	GGCGCC	1 cut(s)	231
EheI	GGCGCC	1 cut(s)	231
ErhI	CCWWGG	2 cut(s)	831, 1228
Esp3I	CGTCTC	1 cut(s)	665
FaeI	CATG	5 cut(s)	229, 544, 835, 1019, 1241
FaqI	GGGAC	3 cut(s)	267, 1040, 1504
FatI	CATG	5 cut(s)	225, 540, 831, 1015, 1237
FblI	GTMKAC	3 cut(s)	243, 261, 1051
Fnu4HI	GCNGC	6 cut(s)	828, 1084, 1087, 1246, 1308, 1392
FokI	GGATG	4 cut(s)	616, 1456, 1580, 1586
FriOI	GRGCYC	3 cut(s)	111, 393, 523
Fsp4HI	GCNGC	6 cut(s)	828, 1084, 1087, 1246, 1308, 1392
FspBI	CTAG	4 cut(s)	876, 1133, 1355, 1591
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	6 cut(s)	828, 1084, 1087, 1246, 1308, 1392
GsuI	CTGGAG	2 cut(s)	505, 887
HaeII	RGCGCY	1 cut(s)	233
HaeIII	GGCC	4 cut(s)	357, 410, 628, 1391
HapII	CCGG	3 cut(s)	394, 609, 801
HgaI	GACGC	1 cut(s)	1139
HhaI	GCGC	1 cut(s)	232
Hin1I	GRCGYC	1 cut(s)	230
Hin1II	CATG	5 cut(s)	229, 544, 835, 1019, 1241
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HindIII	AAGCTT	3 cut(s)	155, 596, 1276
HinfI	GANTC	9 cut(s)	290, 297, 473, 533, 566, 890, 983, 1209, 1555
HpaII	CCGG	3 cut(s)	394, 609, 801
HphI	GGTGA	5 cut(s)	467, 1030, 1102, 1247, 1291
Hpy188I	TCNGA	5 cut(s)	269, 289, 594, 895, 1208
HpyAV	CCTTC	9 cut(s)	76, 732, 748, 1005, 1352, 1381, 1457, 1481, 1505
HpyCH4III	ACNGT	1 cut(s)	97
HpyCH4IV	ACGT	1 cut(s)	405
HpyF10VI	GCNNNNNNNGC	6 cut(s)	315, 833, 885, 1029, 1313, 1427
HpyF3I	CTNAG	8 cut(s)	52, 305, 564, 990, 1213, 1317, 1431, 1542
HpySE526I	ACGT	1 cut(s)	405
Hsp92I	GRCGYC	1 cut(s)	230
Hsp92II	CATG	5 cut(s)	229, 544, 835, 1019, 1241
HspAI	GCGC	1 cut(s)	230
KasI	GGCGCC	1 cut(s)	229
Kzo9I	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
LmnI	GCTCC	4 cut(s)	396, 486, 868, 1321
Lsp1109I	GCAGC	4 cut(s)	839, 1070, 1257, 1319
LweI	GCATC	1 cut(s)	1330
MaeI	CTAG	4 cut(s)	876, 1133, 1355, 1591
MaeII	ACGT	1 cut(s)	405
MaeIII	GTNAC	1 cut(s)	1297
MalI	GATC	6 cut(s)	89, 139, 271, 648, 687, 864
MboI	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
MboII	GAAGA	8 cut(s)	40, 163, 337, 479, 712, 784, 1342, 1459
MflI	RGATCY	3 cut(s)	269, 646, 685
MhlI	GDGCHC	5 cut(s)	111, 393, 523, 657, 1292
MlsI	TGGCCA	1 cut(s)	410
MluCI	AATT	5 cut(s)	838, 896, 1101, 1269, 1370
MluNI	TGGCCA	1 cut(s)	410
Mly113I	GGCGCC	1 cut(s)	230
MlyI	GAGTC	5 cut(s)	291, 527, 575, 884, 1564
Mox20I	TGGCCA	1 cut(s)	410
MroXI	GAANNNNTTC	1 cut(s)	588
MscI	TGGCCA	1 cut(s)	410
MseI	TTAA	2 cut(s)	497, 1280
MslI	CAYNNNNRTG	1 cut(s)	224
Msp20I	TGGCCA	1 cut(s)	410
MspA1I	CMGCKG	1 cut(s)	1310
MspI	CCGG	3 cut(s)	394, 609, 801
MspR9I	CCNGG	4 cut(s)	130, 453, 801, 1155
Mva1269I	GAATGC	2 cut(s)	74, 1233
MvaI	CCWGG	3 cut(s)	130, 453, 1155
MvnI	CGCG	1 cut(s)	295
MwoI	GCNNNNNNNGC	6 cut(s)	315, 833, 885, 1029, 1313, 1427
NarI	GGCGCC	1 cut(s)	230
NciI	CCSGG	1 cut(s)	801
NcoI	CCATGG	1 cut(s)	831
NdeII	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
NlaIII	CATG	5 cut(s)	229, 544, 835, 1019, 1241
NlaIV	GGNNCC	3 cut(s)	231, 271, 687
NmuCI	GTSAC	1 cut(s)	1297
NruI	TCGCGA	1 cut(s)	295
NspI	RCATGY	1 cut(s)	544
NspV	TTCGAA	1 cut(s)	160
PagI	TCATGA	1 cut(s)	1237
PasI	CCCWGGG	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	1 cut(s)	243
PctI	GAATGC	2 cut(s)	74, 1233
PdmI	GAANNNNTTC	1 cut(s)	588
PfeI	GAWTC	4 cut(s)	290, 473, 983, 1209
PkrI	GCNGC	6 cut(s)	829, 1085, 1088, 1247, 1309, 1393
PleI	GAGTC	5 cut(s)	291, 527, 574, 884, 1563
PluTI	GGCGCC	1 cut(s)	233
PpsI	GAGTC	5 cut(s)	291, 527, 574, 884, 1563
Ppu21I	YACGTR	1 cut(s)	406
PshAI	GACNNNNGTC	1 cut(s)	98
Psp124BI	GAGCTC	2 cut(s)	111, 393
Psp6I	CCWGG	3 cut(s)	128, 451, 1153
PspEI	GGTNACC	1 cut(s)	1297
PspGI	CCWGG	3 cut(s)	128, 451, 1153
PspN4I	GGNNCC	3 cut(s)	231, 271, 687
PspPI	GGNCC	3 cut(s)	399, 626, 794
PstI	CTGCAG	1 cut(s)	1309
PstNI	CAGNNNCTG	1 cut(s)	1029
PsuI	RGATCY	3 cut(s)	269, 646, 685
PvuII	CAGCTG	1 cut(s)	1310
RruI	TCGCGA	1 cut(s)	295
RsaI	GTAC	1 cut(s)	805
RsaNI	GTAC	1 cut(s)	804
RseI	CAYNNNNRTG	1 cut(s)	224
SacI	GAGCTC	2 cut(s)	111, 393
SaqAI	TTAA	2 cut(s)	497, 1280
SatI	GCNGC	6 cut(s)	828, 1084, 1087, 1246, 1308, 1392
Sau3AI	GATC	6 cut(s)	87, 137, 269, 646, 685, 862
Sau96I	GGNCC	3 cut(s)	399, 626, 794
SchI	GAGTC	5 cut(s)	291, 527, 575, 884, 1564
ScrFI	CCNGG	4 cut(s)	130, 453, 801, 1155
SduI	GDGCHC	5 cut(s)	111, 393, 523, 657, 1292
SfaNI	GCATC	1 cut(s)	1330
SfcI	CTRYAG	2 cut(s)	1305, 1311
SfoI	GGCGCC	1 cut(s)	231
SfuI	TTCGAA	1 cut(s)	160
SinI	GGWCC	2 cut(s)	399, 794
SmiMI	CAYNNNNRTG	1 cut(s)	224
SmlI	CTYRAG	3 cut(s)	558, 695, 845
SmoI	CTYRAG	3 cut(s)	558, 695, 845
Sse9I	AATT	5 cut(s)	838, 896, 1101, 1269, 1370
SsiI	CCGC	2 cut(s)	1086, 1392
SspDI	GGCGCC	1 cut(s)	229
SspMI	CTAG	4 cut(s)	876, 1133, 1355, 1591
SstI	GAGCTC	2 cut(s)	111, 393
StyD4I	CCNGG	4 cut(s)	128, 451, 799, 1153
StyI	CCWWGG	2 cut(s)	831, 1228
TaaI	ACNGT	1 cut(s)	97
TaiI	ACGT	1 cut(s)	408
TaqI	TCGA	8 cut(s)	136, 160, 300, 378, 504, 669, 815, 1159
TasI	AATT	5 cut(s)	838, 896, 1101, 1269, 1370
TauI	GCSGC	2 cut(s)	1089, 1394
TfiI	GAWTC	4 cut(s)	290, 473, 983, 1209
Tru1I	TTAA	2 cut(s)	497, 1280
Tru9I	TTAA	2 cut(s)	497, 1280
TscAI	CASTG	2 cut(s)	42, 967
TseFI	GTSAC	1 cut(s)	1297
TseI	GCWGC	4 cut(s)	827, 1083, 1245, 1307
Tsp45I	GTSAC	1 cut(s)	1297
TspDTI	ATGAA	9 cut(s)	109, 590, 1051, 1107, 1226, 1254, 1343, 1421, 1460
TspRI	CASTG	2 cut(s)	42, 967
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	2 cut(s)	399, 794
XapI	RAATTY	1 cut(s)	1370
XbaI	TCTAGA	1 cut(s)	1354
XceI	RCATGY	1 cut(s)	544
XmiI	GTMKAC	3 cut(s)	243, 261, 1051
XmnI	GAANNNNTTC	1 cut(s)	588
XspI	CTAG	4 cut(s)	876, 1133, 1355, 1591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.