respiratory chain complex III assembly
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12713 FvH4_1g12717 FvH4_1g12718 FvH4_1g12719 FvH4_7g23320 |
| rosa_chinensis | RchiOBHm_Chr2g0100731 RchiOBHm_Chr2g0100741 RchiOBHm_Chr2g0100751 RchiOBHm_Chr2g0100761 RchiOBHm_Chr2g0100771 |
| rosa_laevigata | RLG00000017003 RLG00000017005 RLG00000017006 RLG00000017007 RLG00000017008 |
| rosa_multiflora | Rmu_sc0001659.1_g000011 Rmu_sc0001659.1_g000013 Rmu_sc0001659.1_g000014 Rmu_sc0001659.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00141880 Rroxscaffold_2G00141890 Rroxscaffold_2G00141900 Rroxscaffold_2G00141910 Rroxscaffold_2G00141920 |
| rosa_rugosa | Rorug02G0092200 Rorug02G0092300 Rorug02G0092400 Rorug02G0092500 |
| rosa_samantha | Rh2BG144600 Rh2BG144700 Rh2BG145000 Rh2BG145200 Rh2CG145600 Rh2CG145800 Rh2CG145900 Rh2CG146000 Rh2CG146100 Rh2DG145100 Rh2DG145300 Rh2DG145400 Rh2DG145500 Rh2DG145600 |
| rosa_wichuraiana | Rw2G010960 Rw2G010970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 36 |
| AciI | CCGC | 1 cut(s) | 852 |
| AclWI | GGATC | 2 cut(s) | 443, 456 |
| AcsI | RAATTY | 1 cut(s) | 1136 |
| AcuI | CTGAAG | 1 cut(s) | 762 |
| AfaI | GTAC | 2 cut(s) | 78, 568 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 569, 1030 |
| AflII | CTTAAG | 1 cut(s) | 458 |
| AgsI | TTSAA | 6 cut(s) | 122, 274, 344, 687, 1040, 1124 |
| AjiI | CACGTC | 1 cut(s) | 934 |
| AjnI | CCWGG | 2 cut(s) | 562, 919 |
| AleI | CACNNNNGTG | 1 cut(s) | 1026 |
| Alw21I | GWGCWC | 4 cut(s) | 168, 420, 939, 1058 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| Alw44I | GTGCAC | 2 cut(s) | 416, 935 |
| AlwI | GGATC | 2 cut(s) | 443, 456 |
| Ama87I | CYCGRG | 1 cut(s) | 811 |
| AoxI | GGCC | 2 cut(s) | 130, 814 |
| ApaLI | GTGCAC | 2 cut(s) | 416, 935 |
| ApeKI | GCWGC | 5 cut(s) | 227, 590, 849, 1073, 1157 |
| ApoI | RAATTY | 1 cut(s) | 1136 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 750 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 2 cut(s) | 557, 814 |
| AsuC2I | CCSGG | 1 cut(s) | 422 |
| AsuHPI | GGTGA | 3 cut(s) | 868, 1013, 1112 |
| AvaI | CYCGRG | 1 cut(s) | 811 |
| AvaII | GGWCC | 1 cut(s) | 557 |
| BaeGI | GKGCMC | 2 cut(s) | 420, 939 |
| BamHI | GGATCC | 1 cut(s) | 448 |
| BanII | GRGCYC | 1 cut(s) | 168 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1333, 1365 |
| BbsI | GAAGAC | 1 cut(s) | 1341 |
| Bbv12I | GWGCWC | 4 cut(s) | 168, 420, 939, 1058 |
| BbvI | GCAGC | 5 cut(s) | 214, 577, 836, 1085, 1144 |
| BccI | CCATC | 1 cut(s) | 827 |
| BciT130I | CCWGG | 2 cut(s) | 564, 921 |
| BcnI | CCSGG | 1 cut(s) | 422 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BfaI | CTAG | 5 cut(s) | 113, 396, 579, 899, 1286 |
| BfmI | CTRYAG | 3 cut(s) | 769, 1071, 1077 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 1 cut(s) | 458 |
| BglII | AGATCT | 1 cut(s) | 409 |
| BisI | GCNGC | 6 cut(s) | 228, 591, 850, 853, 1074, 1158 |
| BlsI | GCNGC | 6 cut(s) | 229, 592, 851, 854, 1075, 1159 |
| Bme1390I | CCNGG | 3 cut(s) | 422, 564, 921 |
| Bme18I | GGWCC | 1 cut(s) | 557 |
| BmeT110I | CYCGRG | 1 cut(s) | 811 |
| BmgBI | CACGTC | 1 cut(s) | 934 |
| BmgT120I | GGNCC | 2 cut(s) | 557, 814 |
| BmiI | GGNNCC | 2 cut(s) | 46, 450 |
| BmrFI | CCNGG | 3 cut(s) | 422, 564, 921 |
| BmsI | GCATC | 2 cut(s) | 1096, 1258 |
| BpiI | GAAGAC | 1 cut(s) | 1341 |
| BpmI | CTGGAG | 2 cut(s) | 152, 593 |
| Bpu10I | CCTNAGC | 2 cut(s) | 327, 979 |
| BpuEI | CTTGAG | 1 cut(s) | 682 |
| BpuMI | CCSGG | 1 cut(s) | 422 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 594, 994 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 569, 1030 |
| Bse1I | ACTGG | 3 cut(s) | 169, 574, 610 |
| Bse3DI | GCAATG | 1 cut(s) | 450 |
| BseBI | CCWGG | 2 cut(s) | 564, 921 |
| BseDI | CCNNGG | 3 cut(s) | 40, 594, 994 |
| BseGI | GGATG | 3 cut(s) | 939, 1267, 1273 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 569, 1030 |
| BseMI | GCAATG | 1 cut(s) | 450 |
| BseMII | CTCAG | 2 cut(s) | 71, 341 |
| BseNI | ACTGG | 3 cut(s) | 169, 574, 610 |
| BseRI | GAGGAG | 1 cut(s) | 514 |
| BseSI | GKGCMC | 2 cut(s) | 420, 939 |
| BseXI | GCAGC | 5 cut(s) | 214, 577, 836, 1085, 1144 |
| BseYI | CCCAGC | 1 cut(s) | 1082 |
| BsgI | GTGCAG | 1 cut(s) | 940 |
| BshFI | GGCC | 2 cut(s) | 132, 816 |
| BsiHKAI | GWGCWC | 4 cut(s) | 168, 420, 939, 1058 |
| BsiHKCI | CYCGRG | 1 cut(s) | 811 |
| BsiSI | CCGG | 1 cut(s) | 422 |
| BslFI | GGGAC | 1 cut(s) | 1246 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 569, 1030 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmBI | CGTCTC | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 1246 |
| BsmI | GAATGC | 1 cut(s) | 999 |
| BsnI | GGCC | 2 cut(s) | 132, 816 |
| BsoBI | CYCGRG | 1 cut(s) | 811 |
| Bsp1286I | GDGCHC | 4 cut(s) | 168, 420, 939, 1058 |
| Bsp143I | GATC | 3 cut(s) | 409, 448, 1360 |
| Bsp19I | CCATGG | 1 cut(s) | 594 |
| BspACI | CCGC | 1 cut(s) | 852 |
| BspANI | GGCC | 2 cut(s) | 132, 816 |
| BspCNI | CTCAG | 2 cut(s) | 72, 340 |
| BspHI | TCATGA | 1 cut(s) | 1003 |
| BspLI | GGNNCC | 2 cut(s) | 46, 450 |
| BspMAI | CTGCAG | 1 cut(s) | 1075 |
| BspPI | GGATC | 2 cut(s) | 443, 456 |
| BspTI | CTTAAG | 1 cut(s) | 458 |
| BsrDI | GCAATG | 1 cut(s) | 450 |
| BsrI | ACTGG | 3 cut(s) | 169, 574, 610 |
| BssECI | CCNNGG | 3 cut(s) | 40, 594, 994 |
| BssMI | GATC | 3 cut(s) | 409, 448, 1360 |
| BssT1I | CCWWGG | 3 cut(s) | 40, 594, 994 |
| Bst2UI | CCWGG | 2 cut(s) | 564, 921 |
| Bst4CI | ACNGT | 2 cut(s) | 106, 439 |
| Bst6I | CTCTTC | 3 cut(s) | 237, 1284, 1293 |
| BstAFI | CTTAAG | 1 cut(s) | 458 |
| BstDEI | CTNAG | 3 cut(s) | 80, 327, 979 |
| BstDSI | CCRYGG | 1 cut(s) | 594 |
| BstEII | GGTNACC | 1 cut(s) | 1063 |
| BstF5I | GGATG | 3 cut(s) | 939, 1267, 1273 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 3 cut(s) | 412, 451, 1363 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 3 cut(s) | 409, 448, 1360 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 172, 227, 596, 1079, 1193 |
| BstNI | CCWGG | 2 cut(s) | 564, 921 |
| BstNSI | RCATGY | 1 cut(s) | 313 |
| BstPI | GGTNACC | 1 cut(s) | 1063 |
| BstSCI | CCNGG | 3 cut(s) | 420, 562, 919 |
| BstSFI | CTRYAG | 3 cut(s) | 769, 1071, 1077 |
| BstSLI | GKGCMC | 2 cut(s) | 420, 939 |
| BstV1I | GCAGC | 5 cut(s) | 214, 577, 836, 1085, 1144 |
| BstV2I | GAAGAC | 1 cut(s) | 1341 |
| BstX2I | RGATCY | 2 cut(s) | 409, 448 |
| BstYI | RGATCY | 2 cut(s) | 409, 448 |
| BsuRI | GGCC | 2 cut(s) | 132, 816 |
| BtgI | CCRYGG | 1 cut(s) | 594 |
| BtgZI | GCGATG | 1 cut(s) | 870 |
| BtrI | CACGTC | 1 cut(s) | 934 |
| BtsCI | GGATG | 3 cut(s) | 939, 1267, 1273 |
| BtsI | GCAGTG | 1 cut(s) | 730 |
| BtsIMutI | CAGTG | 3 cut(s) | 176, 444, 730 |
| CciI | TCATGA | 1 cut(s) | 1003 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 2 cut(s) | 557, 814 |
| CseI | GACGC | 2 cut(s) | 59, 905 |
| CsiI | ACCWGGT | 1 cut(s) | 562 |
| Csp6I | GTAC | 2 cut(s) | 77, 567 |
| CviAII | CATG | 5 cut(s) | 310, 531, 595, 846, 1004 |
| CviQI | GTAC | 2 cut(s) | 77, 567 |
| DdeI | CTNAG | 3 cut(s) | 80, 327, 979 |
| DpnI | GATC | 3 cut(s) | 411, 450, 1362 |
| DpnII | GATC | 3 cut(s) | 409, 448, 1360 |
| Eam1104I | CTCTTC | 3 cut(s) | 237, 1284, 1293 |
| EarI | CTCTTC | 3 cut(s) | 237, 1284, 1293 |
| Ecl136II | GAGCTC | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 3 cut(s) | 40, 594, 994 |
| Eco24I | GRGCYC | 1 cut(s) | 168 |
| Eco47I | GGWCC | 1 cut(s) | 557 |
| Eco53kI | GAGCTC | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 1 cut(s) | 762 |
| Eco88I | CYCGRG | 1 cut(s) | 811 |
| Eco91I | GGTNACC | 1 cut(s) | 1063 |
| EcoICRI | GAGCTC | 1 cut(s) | 166 |
| EcoO65I | GGTNACC | 1 cut(s) | 1063 |
| EcoRII | CCWGG | 2 cut(s) | 562, 919 |
| EcoT14I | CCWWGG | 3 cut(s) | 40, 594, 994 |
| EcoT38I | GRGCYC | 1 cut(s) | 168 |
| ErhI | CCWWGG | 3 cut(s) | 40, 594, 994 |
| Esp3I | CGTCTC | 1 cut(s) | 77 |
| FaeI | CATG | 5 cut(s) | 313, 534, 598, 849, 1007 |
| FaqI | GGGAC | 1 cut(s) | 1246 |
| FatI | CATG | 5 cut(s) | 309, 530, 594, 845, 1003 |
| FauNDI | CATATG | 1 cut(s) | 316 |
| FblI | GTMKAC | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 6 cut(s) | 228, 591, 850, 853, 1074, 1158 |
| FokI | GGATG | 3 cut(s) | 926, 1274, 1280 |
| FriOI | GRGCYC | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 6 cut(s) | 228, 591, 850, 853, 1074, 1158 |
| FspBI | CTAG | 5 cut(s) | 113, 396, 579, 899, 1286 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 6 cut(s) | 228, 591, 850, 853, 1074, 1158 |
| GsaI | CCCAGC | 1 cut(s) | 1086 |
| GsuI | CTGGAG | 2 cut(s) | 152, 593 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 2 cut(s) | 132, 816 |
| HapII | CCGG | 1 cut(s) | 422 |
| HgaI | GACGC | 2 cut(s) | 59, 905 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 5 cut(s) | 313, 534, 598, 849, 1007 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HincII | GTYRAC | 1 cut(s) | 267 |
| HindII | GTYRAC | 1 cut(s) | 267 |
| HindIII | AAGCTT | 2 cut(s) | 365, 1042 |
| HinfI | GANTC | 4 cut(s) | 214, 302, 335, 746 |
| HpaI | GTTAAC | 1 cut(s) | 267 |
| HpaII | CCGG | 1 cut(s) | 422 |
| HphI | GGTGA | 3 cut(s) | 868, 1013, 1112 |
| Hpy166II | GTNNAC | 8 cut(s) | 37, 267, 418, 560, 681, 804, 876, 937 |
| Hpy188I | TCNGA | 4 cut(s) | 64, 658, 963, 974 |
| Hpy188III | TCNNGA | 4 cut(s) | 452, 743, 1004, 1121 |
| Hpy8I | GTNNAC | 8 cut(s) | 37, 267, 418, 560, 681, 804, 876, 937 |
| HpyCH4III | ACNGT | 2 cut(s) | 106, 439 |
| HpyCH4IV | ACGT | 1 cut(s) | 933 |
| HpyCH4V | TGCA | 9 cut(s) | 418, 723, 794, 908, 937, 957, 1073, 1109, 1271 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 172, 227, 596, 1079, 1193 |
| HpyF3I | CTNAG | 3 cut(s) | 80, 327, 979 |
| HpySE526I | ACGT | 1 cut(s) | 933 |
| Hsp92II | CATG | 5 cut(s) | 313, 534, 598, 849, 1007 |
| HspAI | GCGC | 1 cut(s) | 5 |
| KspAI | GTTAAC | 1 cut(s) | 267 |
| Kzo9I | GATC | 3 cut(s) | 409, 448, 1360 |
| LmnI | GCTCC | 4 cut(s) | 44, 171, 631, 1087 |
| Lsp1109I | GCAGC | 5 cut(s) | 214, 577, 836, 1085, 1144 |
| LweI | GCATC | 2 cut(s) | 1096, 1258 |
| MabI | ACCWGGT | 1 cut(s) | 562 |
| MaeI | CTAG | 5 cut(s) | 113, 396, 579, 899, 1286 |
| MaeII | ACGT | 1 cut(s) | 933 |
| MaeIII | GTNAC | 2 cut(s) | 176, 1063 |
| MalI | GATC | 3 cut(s) | 411, 450, 1362 |
| MboI | GATC | 3 cut(s) | 409, 448, 1360 |
| MboII | GAAGA | 5 cut(s) | 251, 254, 1301, 1310, 1341 |
| MflI | RGATCY | 2 cut(s) | 409, 448 |
| MhlI | GDGCHC | 4 cut(s) | 168, 420, 939, 1058 |
| MluCI | AATT | 8 cut(s) | 506, 601, 867, 988, 1035, 1136, 1175, 1312 |
| MlyI | GAGTC | 2 cut(s) | 223, 296 |
| MmeI | TCCRAC | 1 cut(s) | 1275 |
| MroXI | GAANNNNTTC | 1 cut(s) | 750 |
| MseI | TTAA | 3 cut(s) | 266, 459, 1046 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1026 |
| MspA1I | CMGCKG | 1 cut(s) | 1076 |
| MspCI | CTTAAG | 1 cut(s) | 458 |
| MspI | CCGG | 1 cut(s) | 422 |
| MspR9I | CCNGG | 3 cut(s) | 422, 564, 921 |
| Mva1269I | GAATGC | 1 cut(s) | 999 |
| MvaI | CCWGG | 2 cut(s) | 564, 921 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 172, 227, 596, 1079, 1193 |
| NciI | CCSGG | 1 cut(s) | 422 |
| NcoI | CCATGG | 1 cut(s) | 594 |
| NdeI | CATATG | 1 cut(s) | 316 |
| NdeII | GATC | 3 cut(s) | 409, 448, 1360 |
| NlaIII | CATG | 5 cut(s) | 313, 534, 598, 849, 1007 |
| NlaIV | GGNNCC | 2 cut(s) | 46, 450 |
| NspI | RCATGY | 1 cut(s) | 313 |
| OliI | CACNNNNGTG | 1 cut(s) | 1026 |
| PagI | TCATGA | 1 cut(s) | 1003 |
| PctI | GAATGC | 1 cut(s) | 999 |
| PdmI | GAANNNNTTC | 1 cut(s) | 750 |
| PfeI | GAWTC | 2 cut(s) | 335, 746 |
| PkrI | GCNGC | 6 cut(s) | 229, 592, 851, 854, 1075, 1159 |
| PleI | GAGTC | 2 cut(s) | 222, 296 |
| PpsI | GAGTC | 2 cut(s) | 222, 296 |
| Psp124BI | GAGCTC | 1 cut(s) | 168 |
| Psp6I | CCWGG | 2 cut(s) | 562, 919 |
| PspEI | GGTNACC | 1 cut(s) | 1063 |
| PspFI | CCCAGC | 1 cut(s) | 1082 |
| PspGI | CCWGG | 2 cut(s) | 562, 919 |
| PspN4I | GGNNCC | 2 cut(s) | 46, 450 |
| PspPI | GGNCC | 2 cut(s) | 557, 814 |
| PstI | CTGCAG | 1 cut(s) | 1075 |
| PsuI | RGATCY | 2 cut(s) | 409, 448 |
| PvuII | CAGCTG | 1 cut(s) | 1076 |
| RsaI | GTAC | 2 cut(s) | 78, 568 |
| RsaNI | GTAC | 2 cut(s) | 77, 567 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1026 |
| SacI | GAGCTC | 1 cut(s) | 168 |
| SaqAI | TTAA | 3 cut(s) | 266, 459, 1046 |
| SatI | GCNGC | 6 cut(s) | 228, 591, 850, 853, 1074, 1158 |
| Sau3AI | GATC | 3 cut(s) | 409, 448, 1360 |
| Sau96I | GGNCC | 2 cut(s) | 557, 814 |
| SchI | GAGTC | 2 cut(s) | 223, 296 |
| ScrFI | CCNGG | 3 cut(s) | 422, 564, 921 |
| SduI | GDGCHC | 4 cut(s) | 168, 420, 939, 1058 |
| SexAI | ACCWGGT | 1 cut(s) | 562 |
| SfaNI | GCATC | 2 cut(s) | 1096, 1258 |
| SfcI | CTRYAG | 3 cut(s) | 769, 1071, 1077 |
| SinI | GGWCC | 1 cut(s) | 557 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1026 |
| SmlI | CTYRAG | 2 cut(s) | 458, 661 |
| SmoI | CTYRAG | 2 cut(s) | 458, 661 |
| Sse9I | AATT | 8 cut(s) | 506, 601, 867, 988, 1035, 1136, 1175, 1312 |
| SsiI | CCGC | 1 cut(s) | 852 |
| SspMI | CTAG | 5 cut(s) | 113, 396, 579, 899, 1286 |
| SstI | GAGCTC | 1 cut(s) | 168 |
| StyD4I | CCNGG | 3 cut(s) | 420, 562, 919 |
| StyI | CCWWGG | 3 cut(s) | 40, 594, 994 |
| TaaI | ACNGT | 2 cut(s) | 106, 439 |
| TaiI | ACGT | 1 cut(s) | 936 |
| TaqI | TCGA | 2 cut(s) | 925, 1359 |
| TasI | AATT | 8 cut(s) | 506, 601, 867, 988, 1035, 1136, 1175, 1312 |
| TauI | GCSGC | 1 cut(s) | 855 |
| TfiI | GAWTC | 2 cut(s) | 335, 746 |
| Tru1I | TTAA | 3 cut(s) | 266, 459, 1046 |
| Tru9I | TTAA | 3 cut(s) | 266, 459, 1046 |
| TscAI | CASTG | 3 cut(s) | 176, 444, 730 |
| TseI | GCWGC | 5 cut(s) | 227, 590, 849, 1073, 1157 |
| TspDTI | ATGAA | 6 cut(s) | 252, 481, 817, 992, 1020, 1109 |
| TspRI | CASTG | 3 cut(s) | 176, 444, 730 |
| Vha464I | CTTAAG | 1 cut(s) | 458 |
| VneI | GTGCAC | 2 cut(s) | 416, 935 |
| VpaK11BI | GGWCC | 1 cut(s) | 557 |
| XapI | RAATTY | 1 cut(s) | 1136 |
| XceI | RCATGY | 1 cut(s) | 313 |
| XmiI | GTMKAC | 1 cut(s) | 36 |
| XmnI | GAANNNNTTC | 1 cut(s) | 750 |
| XspI | CTAG | 5 cut(s) | 113, 396, 579, 899, 1286 |