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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53440 AT3G53440 |
| fragaria_vesca | FvH4_1g18920 |
| malus_domestica | MD01G1045600.v1.1 MD15G1306300.v1.1 |
| prunus_persica | Prupe.6G210300_v2.0.a1 |
| pyrus_communis | pycom01g07170 pycom15g27060 pycom15g27070 |
| rosa_chinensis | RchiOBHm_Chr2g0109931 |
| rosa_laevigata | RLG00000017770 RLG00000036544 |
| rosa_multiflora | Rmu_sc0005173.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00133870 |
| rosa_rugosa | Rorug02G0163900 |
| rosa_samantha | Rh2AG215900 Rh2BG225900 Rh2CG218100 Rh2DG221400 Rh5DG403700 |
| rosa_wichuraiana | Rw2G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1251 |
| Acc36I | ACCTGC | 2 cut(s) | 1021, 1510 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 957 |
| AccI | GTMKAC | 2 cut(s) | 241, 1183 |
| AciI | CCGC | 4 cut(s) | 168, 307, 905, 1445 |
| AclWI | GGATC | 1 cut(s) | 1668 |
| AcoI | YGGCCR | 1 cut(s) | 282 |
| AcsI | RAATTY | 6 cut(s) | 206, 362, 717, 772, 1144, 1393 |
| AcyI | GRCGYC | 1 cut(s) | 1013 |
| AdeI | CACNNNGTG | 1 cut(s) | 19 |
| AfaI | GTAC | 3 cut(s) | 390, 1326, 1377 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 441, 957, 1016, 1160, 1340, 1467 |
| AgsI | TTSAA | 5 cut(s) | 322, 400, 466, 598, 839 |
| AhlI | ACTAGT | 1 cut(s) | 689 |
| AjnI | CCWGG | 3 cut(s) | 15, 1015, 1683 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 191, 223 |
| Alw21I | GWGCWC | 1 cut(s) | 1296 |
| Alw26I | GTCTC | 8 cut(s) | 36, 296, 520, 552, 745, 1349, 1481, 1787 |
| Alw44I | GTGCAC | 1 cut(s) | 1292 |
| AlwI | GGATC | 1 cut(s) | 1668 |
| AoxI | GGCC | 3 cut(s) | 51, 282, 978 |
| ApaLI | GTGCAC | 1 cut(s) | 1292 |
| ApeKI | GCWGC | 3 cut(s) | 170, 304, 1224 |
| ApoI | RAATTY | 6 cut(s) | 206, 362, 717, 772, 1144, 1393 |
| AspLEI | GCGC | 1 cut(s) | 1252 |
| AspS9I | GGNCC | 1 cut(s) | 1343 |
| AsuC2I | CCSGG | 1 cut(s) | 1050 |
| AsuHPI | GGTGA | 2 cut(s) | 95, 820 |
| AsuNHI | GCTAGC | 1 cut(s) | 1000 |
| AvaII | GGWCC | 1 cut(s) | 1343 |
| BaeGI | GKGCMC | 1 cut(s) | 1296 |
| BauI | CACGAG | 1 cut(s) | 286 |
| Bbv12I | GWGCWC | 1 cut(s) | 1296 |
| BbvCI | CCTCAGC | 1 cut(s) | 492 |
| BbvI | GCAGC | 3 cut(s) | 157, 316, 1211 |
| BccI | CCATC | 5 cut(s) | 605, 752, 1251, 1354, 1751 |
| BceAI | ACGGC | 1 cut(s) | 297 |
| BciT130I | CCWGG | 3 cut(s) | 17, 1017, 1685 |
| BciVI | GTATCC | 1 cut(s) | 1074 |
| BcnI | CCSGG | 1 cut(s) | 1050 |
| BcoDI | GTCTC | 8 cut(s) | 36, 296, 520, 552, 745, 1349, 1481, 1787 |
| BcuI | ACTAGT | 1 cut(s) | 689 |
| BfaI | CTAG | 5 cut(s) | 372, 627, 690, 1001, 1368 |
| BfmI | CTRYAG | 3 cut(s) | 171, 1225, 1727 |
| BfuAI | ACCTGC | 2 cut(s) | 1021, 1510 |
| BfuI | GTATCC | 1 cut(s) | 1074 |
| BglII | AGATCT | 4 cut(s) | 86, 329, 698, 1312 |
| BisI | GCNGC | 4 cut(s) | 171, 305, 308, 1225 |
| BlsI | GCNGC | 4 cut(s) | 172, 306, 309, 1226 |
| BmcAI | AGTACT | 1 cut(s) | 1326 |
| Bme1390I | CCNGG | 4 cut(s) | 17, 1017, 1050, 1685 |
| Bme18I | GGWCC | 1 cut(s) | 1343 |
| BmgT120I | GGNCC | 1 cut(s) | 1343 |
| BmiI | GGNNCC | 1 cut(s) | 1047 |
| BmrFI | CCNGG | 4 cut(s) | 17, 1017, 1050, 1685 |
| BmsI | GCATC | 2 cut(s) | 1684, 1693 |
| BmtI | GCTAGC | 1 cut(s) | 1004 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 29, 61, 485, 517, 500, 532, 725, 757 |
| BpmI | CTGGAG | 1 cut(s) | 102 |
| Bpu10I | CCTNAGC | 1 cut(s) | 492 |
| BpuEI | CTTGAG | 4 cut(s) | 269, 858, 1349, 1450 |
| BpuMI | CCSGG | 1 cut(s) | 1050 |
| Bsa29I | ATCGAT | 1 cut(s) | 1626 |
| BsaHI | GRCGYC | 1 cut(s) | 1013 |
| BsaI | GGTCTC | 2 cut(s) | 552, 745 |
| BsaJI | CCNNGG | 4 cut(s) | 1118, 1156, 1683, 1740 |
| BsaWI | WCCGGW | 2 cut(s) | 271, 1507 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 753, 783, 924, 954 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 441, 957, 1016, 1160, 1340, 1467 |
| Bse1I | ACTGG | 2 cut(s) | 1047, 1621 |
| BseBI | CCWGG | 3 cut(s) | 17, 1017, 1685 |
| BseCI | ATCGAT | 1 cut(s) | 1626 |
| BseDI | CCNNGG | 4 cut(s) | 1118, 1156, 1683, 1740 |
| BseGI | GGATG | 4 cut(s) | 490, 1148, 1756, 1777 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 441, 957, 1016, 1160, 1340, 1467 |
| BseMII | CTCAG | 9 cut(s) | 27, 60, 170, 483, 756, 1344, 1376, 1476, 1655 |
| BseNI | ACTGG | 2 cut(s) | 1047, 1621 |
| BseRI | GAGGAG | 1 cut(s) | 1729 |
| BseSI | GKGCMC | 1 cut(s) | 1296 |
| BseXI | GCAGC | 3 cut(s) | 157, 316, 1211 |
| BseYI | CCCAGC | 1 cut(s) | 440 |
| BsgI | GTGCAG | 1 cut(s) | 1044 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1124 |
| BshFI | GGCC | 3 cut(s) | 53, 284, 980 |
| BshVI | ATCGAT | 1 cut(s) | 1626 |
| BsiEI | CGRYCG | 1 cut(s) | 1124 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1296 |
| BsiSI | CCGG | 4 cut(s) | 148, 272, 1050, 1508 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 441, 957, 1016, 1160, 1340, 1467 |
| BsmAI | GTCTC | 8 cut(s) | 36, 296, 520, 552, 745, 1349, 1481, 1787 |
| BsmI | GAATGC | 1 cut(s) | 13 |
| BsnI | GGCC | 3 cut(s) | 53, 284, 980 |
| Bso31I | GGTCTC | 2 cut(s) | 552, 745 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1296 |
| Bsp143I | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| BspACI | CCGC | 4 cut(s) | 168, 307, 905, 1445 |
| BspANI | GGCC | 3 cut(s) | 53, 284, 980 |
| BspCNI | CTCAG | 9 cut(s) | 28, 59, 169, 484, 755, 1345, 1375, 1477, 1656 |
| BspDI | ATCGAT | 1 cut(s) | 1626 |
| BspLI | GGNNCC | 1 cut(s) | 1047 |
| BspMAI | CTGCAG | 3 cut(s) | 175, 1229, 1731 |
| BspMI | ACCTGC | 2 cut(s) | 1021, 1510 |
| BspOI | GCTAGC | 1 cut(s) | 1004 |
| BspPI | GGATC | 1 cut(s) | 1668 |
| BspTNI | GGTCTC | 2 cut(s) | 552, 745 |
| BsrI | ACTGG | 2 cut(s) | 1047, 1621 |
| BssECI | CCNNGG | 4 cut(s) | 1118, 1156, 1683, 1740 |
| BssMI | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| BssNI | GRCGYC | 1 cut(s) | 1013 |
| BssSI | CACGAG | 1 cut(s) | 286 |
| BssT1I | CCWWGG | 1 cut(s) | 1156 |
| Bst2BI | CACGAG | 1 cut(s) | 286 |
| Bst2UI | CCWGG | 3 cut(s) | 17, 1017, 1685 |
| Bst4CI | ACNGT | 2 cut(s) | 263, 844 |
| Bst6I | CTCTTC | 2 cut(s) | 248, 911 |
| BstACI | GRCGYC | 1 cut(s) | 1013 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1679, 1703 |
| BstC8I | GCNNGC | 1 cut(s) | 1002 |
| BstF5I | GGATG | 4 cut(s) | 490, 1148, 1756, 1777 |
| BstHHI | GCGC | 1 cut(s) | 1252 |
| BstKTI | GATC | 6 cut(s) | 89, 332, 635, 701, 1315, 1663 |
| BstMAI | GTCTC | 8 cut(s) | 36, 296, 520, 552, 745, 1349, 1481, 1787 |
| BstMBI | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| BstMCI | CGRYCG | 1 cut(s) | 1124 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1006, 1256, 1265, 1679, 1703 |
| BstNI | CCWGG | 3 cut(s) | 17, 1017, 1685 |
| BstSCI | CCNGG | 4 cut(s) | 15, 1015, 1048, 1683 |
| BstSFI | CTRYAG | 3 cut(s) | 171, 1225, 1727 |
| BstSLI | GKGCMC | 1 cut(s) | 1296 |
| BstV1I | GCAGC | 3 cut(s) | 157, 316, 1211 |
| BstX2I | RGATCY | 5 cut(s) | 86, 329, 698, 1312, 1660 |
| BstYI | RGATCY | 5 cut(s) | 86, 329, 698, 1312, 1660 |
| Bsu15I | ATCGAT | 1 cut(s) | 1626 |
| BsuI | GTATCC | 1 cut(s) | 1074 |
| BsuRI | GGCC | 3 cut(s) | 53, 284, 980 |
| BsuTUI | ATCGAT | 1 cut(s) | 1626 |
| BtsCI | GGATG | 4 cut(s) | 490, 1148, 1756, 1777 |
| BtsIMutI | CAGTG | 3 cut(s) | 54, 613, 1614 |
| BveI | ACCTGC | 2 cut(s) | 1021, 1510 |
| Cac8I | GCNNGC | 1 cut(s) | 1002 |
| CfoI | GCGC | 1 cut(s) | 1252 |
| Cfr13I | GGNCC | 1 cut(s) | 1343 |
| ClaI | ATCGAT | 1 cut(s) | 1626 |
| CseI | GACGC | 1 cut(s) | 1021 |
| CsiI | ACCWGGT | 1 cut(s) | 15 |
| Csp6I | GTAC | 3 cut(s) | 389, 1325, 1376 |
| CviAII | CATG | 2 cut(s) | 1220, 1541 |
| CviQI | GTAC | 3 cut(s) | 389, 1325, 1376 |
| DpnI | GATC | 6 cut(s) | 88, 331, 634, 700, 1314, 1662 |
| DpnII | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| DraI | TTTAAA | 1 cut(s) | 367 |
| DraIII | CACNNNGTG | 1 cut(s) | 19 |
| EaeI | YGGCCR | 1 cut(s) | 282 |
| Eam1104I | CTCTTC | 2 cut(s) | 248, 911 |
| EarI | CTCTTC | 2 cut(s) | 248, 911 |
| Eco130I | CCWWGG | 1 cut(s) | 1156 |
| Eco31I | GGTCTC | 2 cut(s) | 552, 745 |
| Eco47I | GGWCC | 1 cut(s) | 1343 |
| EcoRI | GAATTC | 1 cut(s) | 772 |
| EcoRII | CCWGG | 3 cut(s) | 15, 1015, 1683 |
| EcoT14I | CCWWGG | 1 cut(s) | 1156 |
| ErhI | CCWWGG | 1 cut(s) | 1156 |
| FaeI | CATG | 2 cut(s) | 1223, 1544 |
| FatI | CATG | 2 cut(s) | 1219, 1540 |
| FauI | CCCGC | 1 cut(s) | 1438 |
| FblI | GTMKAC | 2 cut(s) | 241, 1183 |
| Fnu4HI | GCNGC | 4 cut(s) | 171, 305, 308, 1225 |
| FokI | GGATG | 4 cut(s) | 497, 1135, 1763, 1784 |
| Fsp4HI | GCNGC | 4 cut(s) | 171, 305, 308, 1225 |
| FspBI | CTAG | 5 cut(s) | 372, 627, 690, 1001, 1368 |
| FspI | TGCGCA | 1 cut(s) | 1251 |
| GlaI | GCGC | 1 cut(s) | 1251 |
| GluI | GCNGC | 4 cut(s) | 171, 305, 308, 1225 |
| GsaI | CCCAGC | 1 cut(s) | 444 |
| GsuI | CTGGAG | 1 cut(s) | 102 |
| HaeIII | GGCC | 3 cut(s) | 53, 284, 980 |
| HapII | CCGG | 4 cut(s) | 148, 272, 1050, 1508 |
| HgaI | GACGC | 1 cut(s) | 1021 |
| HhaI | GCGC | 1 cut(s) | 1252 |
| Hin1I | GRCGYC | 1 cut(s) | 1013 |
| Hin1II | CATG | 2 cut(s) | 1223, 1544 |
| Hin6I | GCGC | 1 cut(s) | 1250 |
| HinP1I | GCGC | 1 cut(s) | 1250 |
| HincII | GTYRAC | 1 cut(s) | 667 |
| HindII | GTYRAC | 1 cut(s) | 667 |
| HindIII | AAGCTT | 1 cut(s) | 228 |
| HpaII | CCGG | 4 cut(s) | 148, 272, 1050, 1508 |
| HphI | GGTGA | 2 cut(s) | 95, 820 |
| Hpy166II | GTNNAC | 5 cut(s) | 242, 667, 1184, 1232, 1294 |
| Hpy8I | GTNNAC | 5 cut(s) | 242, 667, 1184, 1232, 1294 |
| Hpy99I | CGWCG | 1 cut(s) | 1015 |
| HpyAV | CCTTC | 5 cut(s) | 207, 730, 848, 1389, 1427 |
| HpyCH4III | ACNGT | 2 cut(s) | 263, 844 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1006, 1256, 1265, 1679, 1703 |
| Hsp92I | GRCGYC | 1 cut(s) | 1013 |
| Hsp92II | CATG | 2 cut(s) | 1223, 1544 |
| HspAI | GCGC | 1 cut(s) | 1250 |
| Kzo9I | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| LmnI | GCTCC | 3 cut(s) | 274, 592, 761 |
| Lsp1109I | GCAGC | 3 cut(s) | 157, 316, 1211 |
| LweI | GCATC | 2 cut(s) | 1684, 1693 |
| MabI | ACCWGGT | 1 cut(s) | 15 |
| MaeI | CTAG | 5 cut(s) | 372, 627, 690, 1001, 1368 |
| MaeIII | GTNAC | 2 cut(s) | 257, 1475 |
| MalI | GATC | 6 cut(s) | 88, 331, 634, 700, 1314, 1662 |
| MboI | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| MboII | GAAGA | 9 cut(s) | 92, 96, 265, 430, 627, 928, 947, 1793, 1799 |
| MfeI | CAATTG | 1 cut(s) | 1559 |
| MflI | RGATCY | 5 cut(s) | 86, 329, 698, 1312, 1660 |
| MhlI | GDGCHC | 1 cut(s) | 1296 |
| MlyI | GAGTC | 7 cut(s) | 38, 298, 522, 616, 1211, 1651, 1754 |
| MmeI | TCCRAC | 4 cut(s) | 321, 938, 1412, 1728 |
| MseI | TTAA | 3 cut(s) | 366, 1191, 1514 |
| MspA1I | CMGCKG | 2 cut(s) | 170, 307 |
| MspI | CCGG | 4 cut(s) | 148, 272, 1050, 1508 |
| MspR9I | CCNGG | 4 cut(s) | 17, 1017, 1050, 1685 |
| MunI | CAATTG | 1 cut(s) | 1559 |
| Mva1269I | GAATGC | 1 cut(s) | 13 |
| MvaI | CCWGG | 3 cut(s) | 17, 1017, 1685 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1006, 1256, 1265, 1679, 1703 |
| NciI | CCSGG | 1 cut(s) | 1050 |
| NdeII | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| NheI | GCTAGC | 1 cut(s) | 1000 |
| NlaIII | CATG | 2 cut(s) | 1223, 1544 |
| NlaIV | GGNNCC | 1 cut(s) | 1047 |
| NsbI | TGCGCA | 1 cut(s) | 1251 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 413 |
| PctI | GAATGC | 1 cut(s) | 13 |
| PfeI | GAWTC | 8 cut(s) | 176, 400, 452, 466, 497, 533, 1413, 1623 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 957 |
| PfoI | TCCNGGA | 1 cut(s) | 1048 |
| PkrI | GCNGC | 4 cut(s) | 172, 306, 309, 1226 |
| PleI | GAGTC | 7 cut(s) | 38, 297, 521, 616, 1210, 1650, 1753 |
| PpsI | GAGTC | 7 cut(s) | 38, 297, 521, 616, 1210, 1650, 1753 |
| Psp6I | CCWGG | 3 cut(s) | 15, 1015, 1683 |
| PspFI | CCCAGC | 1 cut(s) | 440 |
| PspGI | CCWGG | 3 cut(s) | 15, 1015, 1683 |
| PspN4I | GGNNCC | 1 cut(s) | 1047 |
| PspPI | GGNCC | 1 cut(s) | 1343 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 805, 837 |
| PstI | CTGCAG | 3 cut(s) | 175, 1229, 1731 |
| PsuI | RGATCY | 5 cut(s) | 86, 329, 698, 1312, 1660 |
| RsaI | GTAC | 3 cut(s) | 390, 1326, 1377 |
| RsaNI | GTAC | 3 cut(s) | 389, 1325, 1376 |
| SaqAI | TTAA | 3 cut(s) | 366, 1191, 1514 |
| SatI | GCNGC | 4 cut(s) | 171, 305, 308, 1225 |
| Sau3AI | GATC | 6 cut(s) | 86, 329, 632, 698, 1312, 1660 |
| Sau96I | GGNCC | 1 cut(s) | 1343 |
| ScaI | AGTACT | 1 cut(s) | 1326 |
| SchI | GAGTC | 7 cut(s) | 38, 298, 522, 616, 1211, 1651, 1754 |
| ScrFI | CCNGG | 4 cut(s) | 17, 1017, 1050, 1685 |
| SduI | GDGCHC | 1 cut(s) | 1296 |
| SexAI | ACCWGGT | 1 cut(s) | 15 |
| SfaNI | GCATC | 2 cut(s) | 1684, 1693 |
| SfcI | CTRYAG | 3 cut(s) | 171, 1225, 1727 |
| SinI | GGWCC | 1 cut(s) | 1343 |
| SmiI | ATTTAAAT | 1 cut(s) | 367 |
| SmlI | CTYRAG | 4 cut(s) | 248, 873, 1328, 1465 |
| SmoI | CTYRAG | 4 cut(s) | 248, 873, 1328, 1465 |
| SpeI | ACTAGT | 1 cut(s) | 689 |
| SsiI | CCGC | 4 cut(s) | 168, 307, 905, 1445 |
| SspMI | CTAG | 5 cut(s) | 372, 627, 690, 1001, 1368 |
| StyD4I | CCNGG | 4 cut(s) | 15, 1015, 1048, 1683 |
| StyI | CCWWGG | 1 cut(s) | 1156 |
| SwaI | ATTTAAAT | 1 cut(s) | 367 |
| TaaI | ACNGT | 2 cut(s) | 263, 844 |
| TaqI | TCGA | 7 cut(s) | 407, 416, 446, 566, 638, 1124, 1626 |
| TaqII | GACCGA | 1 cut(s) | 1110 |
| TatI | WGTACW | 1 cut(s) | 1324 |
| TauI | GCSGC | 1 cut(s) | 310 |
| TfiI | GAWTC | 8 cut(s) | 176, 400, 452, 466, 497, 533, 1413, 1623 |
| Tru1I | TTAA | 3 cut(s) | 366, 1191, 1514 |
| Tru9I | TTAA | 3 cut(s) | 366, 1191, 1514 |
| TscAI | CASTG | 3 cut(s) | 54, 613, 1621 |
| TseI | GCWGC | 3 cut(s) | 170, 304, 1224 |
| TspDTI | ATGAA | 4 cut(s) | 501, 1137, 1644, 1800 |
| TspRI | CASTG | 3 cut(s) | 54, 613, 1621 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 957 |
| VneI | GTGCAC | 1 cut(s) | 1292 |
| VpaK11BI | GGWCC | 1 cut(s) | 1343 |
| XapI | RAATTY | 6 cut(s) | 206, 362, 717, 772, 1144, 1393 |
| XbaI | TCTAGA | 1 cut(s) | 371 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 721 |
| XmiI | GTMKAC | 2 cut(s) | 241, 1183 |
| XspI | CTAG | 5 cut(s) | 372, 627, 690, 1001, 1368 |
| ZrmI | AGTACT | 1 cut(s) | 1326 |