Alkaline neutral invertase CINV2-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G15930 AT4G15930 |
| fragaria_vesca | FvH4_4g18520 FvH4_4g18520 |
| malus_domestica | MD13G1166300.v1.1 MD16G1166100.v1.1 |
| prunus_persica | Prupe.1G132800_v2.0.a1 Prupe.1G132800_v2.0.a1 |
| pyrus_communis | pycom16g14050 |
| rosa_chinensis | RchiOBHm_Chr2g0117161 RchiOBHm_Chr4g0423081 |
| rosa_laevigata | RLG00000007588 |
| rosa_multiflora | Rmu_sc0003669.1_g000002 |
| rosa_roxburghii | Rroxscaffold_176G00431590 Rroxscaffold_7G00213090 |
| rosa_rugosa | Rorug04G0183600 |
| rosa_samantha | Rh1AG192300 Rh1DG131400 Rh2AG199600 Rh2AG249600 Rh2AG493300 Rh2BG593200 Rh2CG253700 Rh2CG479500 Rh2DG136800 Rh2DG257300 Rh3BG319600 Rh4AG243300 Rh4BG248000 Rh4CG257800 Rh4DG243100 Rh5DG009100 Rh6BG298500 Rh7AG415600 |
| rosa_wichuraiana | Rw4G020990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AcyI | GRCGYC | 1 cut(s) | 95 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AoxI | GGCC | 1 cut(s) | 66 |
| BccI | CCATC | 2 cut(s) | 74, 83 |
| BsaHI | GRCGYC | 1 cut(s) | 95 |
| Bse1I | ACTGG | 2 cut(s) | 64, 98 |
| BseNI | ACTGG | 2 cut(s) | 64, 98 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BslFI | GGGAC | 1 cut(s) | 106 |
| BsmFI | GGGAC | 1 cut(s) | 106 |
| BsnI | GGCC | 1 cut(s) | 68 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BsrI | ACTGG | 2 cut(s) | 64, 98 |
| BssNI | GRCGYC | 1 cut(s) | 95 |
| BstACI | GRCGYC | 1 cut(s) | 95 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstDEI | CTNAG | 1 cut(s) | 85 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| CseI | GACGC | 1 cut(s) | 103 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviJI | RGCY | 3 cut(s) | 11, 68, 84 |
| CviKI_1 | RGCY | 3 cut(s) | 11, 68, 84 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DdeI | CTNAG | 1 cut(s) | 85 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| FaiI | YATR | 2 cut(s) | 110, 117 |
| FaqI | GGGAC | 1 cut(s) | 106 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HgaI | GACGC | 1 cut(s) | 103 |
| Hin1I | GRCGYC | 1 cut(s) | 95 |
| HinfI | GANTC | 1 cut(s) | 119 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| HpyAV | CCTTC | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 85 |
| Hsp92I | GRCGYC | 1 cut(s) | 95 |
| LpnPI | CCDG | 6 cut(s) | 11, 17, 45, 82, 90, 111 |
| MluCI | AATT | 3 cut(s) | 16, 112, 124 |
| MlyI | GAGTC | 1 cut(s) | 113 |
| MseI | TTAA | 1 cut(s) | 15 |
| PleI | GAGTC | 1 cut(s) | 113 |
| PpsI | GAGTC | 1 cut(s) | 113 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SaqAI | TTAA | 1 cut(s) | 15 |
| SchI | GAGTC | 1 cut(s) | 113 |
| SetI | ASST | 2 cut(s) | 30, 36 |
| SgeI | CNNG | 6 cut(s) | 38, 44, 72, 81, 89, 110 |
| Sse9I | AATT | 3 cut(s) | 16, 112, 124 |
| SsiI | CCGC | 1 cut(s) | 5 |
| TaqI | TCGA | 1 cut(s) | 122 |
| TasI | AATT | 3 cut(s) | 16, 112, 124 |
| Tru1I | TTAA | 1 cut(s) | 15 |
| Tru9I | TTAA | 1 cut(s) | 15 |
| TspDTI | ATGAA | 1 cut(s) | 125 |