RchiOBHm_Chr2g0159141

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
75268524 .. 75269743
1220 bp
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UTR
Exon/CDS
Intron
PRQ52778

Sequence Viewer

Length: 156 bp
ATGAGGCATTATACTCGCAACTTCATCATGAGATGTTTAAGGGACTCAGAGGTCTTCTTCAACCACCGCTCAATGGAGTTGAGAAACATGGTCTTCCTGTTGTGCTCTAAGTATCTATCGCGCAGGCATAGCTTTAGATATTACAGGTTTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

6.67

Weight (kDa)

11.15

Isoelectric Point (pI)

63.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 50
AccBSI CCGCTC 1 cut(s) 69
AccII CGCG 1 cut(s) 121
AciI CCGC 1 cut(s) 67
AfiI CCNNNNNNNGG 1 cut(s) 73
AgsI TTSAA 1 cut(s) 61
AluBI AGCT 1 cut(s) 132
AluI AGCT 1 cut(s) 132
Alw21I GWGCWC 1 cut(s) 107
AspLEI GCGC 1 cut(s) 123
BbsI GAAGAC 2 cut(s) 46, 85
Bbv12I GWGCWC 1 cut(s) 107
BcgI CGANNNNNNTGC 1 cut(s) 30
BpiI GAAGAC 2 cut(s) 46, 85
Bsc4I CCNNNNNNNGG 1 cut(s) 73
BseLI CCNNNNNNNGG 1 cut(s) 73
BseMII CTCAG 1 cut(s) 60
Bsh1236I CGCG 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 107
BslFI GGGAC 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 73
BsmFI GGGAC 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 107
BspACI CCGC 1 cut(s) 67
BspCNI CTCAG 1 cut(s) 59
BspFNI CGCG 1 cut(s) 121
BspHI TCATGA 1 cut(s) 27
BsrBI CCGCTC 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 125
BstDEI CTNAG 2 cut(s) 46, 108
BstFNI CGCG 1 cut(s) 121
BstHHI GCGC 1 cut(s) 123
BstMWI GCNNNNNNNGC 1 cut(s) 129
BstUI CGCG 1 cut(s) 121
BstV2I GAAGAC 2 cut(s) 46, 85
Cac8I GCNNGC 1 cut(s) 125
CciI TCATGA 1 cut(s) 27
CfoI GCGC 1 cut(s) 123
CviAII CATG 2 cut(s) 28, 88
CviJI RGCY 1 cut(s) 132
CviKI_1 RGCY 1 cut(s) 132
DdeI CTNAG 2 cut(s) 46, 108
DrdI GACNNNNNNGTC 1 cut(s) 50
DseDI GACNNNNNNGTC 1 cut(s) 50
FaeI CATG 2 cut(s) 31, 91
FaiI YATR 4 cut(s) 12, 29, 89, 129
FaqI GGGAC 1 cut(s) 56
FatI CATG 2 cut(s) 27, 87
GlaI GCGC 1 cut(s) 122
HhaI GCGC 1 cut(s) 123
Hin1II CATG 2 cut(s) 31, 91
Hin6I GCGC 1 cut(s) 121
HinP1I GCGC 1 cut(s) 121
HinfI GANTC 1 cut(s) 44
Hpy188I TCNGA 1 cut(s) 49
Hpy188III TCNNGA 1 cut(s) 28
HpyF10VI GCNNNNNNNGC 1 cut(s) 129
HpyF3I CTNAG 2 cut(s) 46, 108
Hsp92II CATG 2 cut(s) 31, 91
HspAI GCGC 1 cut(s) 121
LpnPI CCDG 3 cut(s) 109, 110, 130
MbiI CCGCTC 1 cut(s) 69
MboII GAAGA 3 cut(s) 46, 49, 85
MhlI GDGCHC 1 cut(s) 107
MlyI GAGTC 1 cut(s) 38
MnlI CCTC 1 cut(s) 43
MseI TTAA 1 cut(s) 38
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 1 cut(s) 129
NlaIII CATG 2 cut(s) 31, 91
PagI TCATGA 1 cut(s) 27
PleI GAGTC 1 cut(s) 38
PpsI GAGTC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 38
SchI GAGTC 1 cut(s) 38
SduI GDGCHC 1 cut(s) 107
SetI ASST 3 cut(s) 54, 134, 149
SgeI CNNG 6 cut(s) 27, 40, 100, 109, 132, 136
SsiI CCGC 1 cut(s) 67
Tru1I TTAA 1 cut(s) 38
Tru9I TTAA 1 cut(s) 38
TspDTI ATGAA 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.