Rorug01G0341600

C-terminal binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001607
Physical Location & Seq
Forward (+)
45961020 .. 45967359
6340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0341600.1

Sequence Viewer

Length: 1410 bp
ATGGATTCGACTCGGTCCGAAATGCAAGAGCCGAGTATTGATACCGATAAGCTGAGCTACGAGATATTCTCGATTCTGGAGAGTAAGTTTTTGTTTGGATATGACGATCAGAAGCTGTGGGTGCCGAAGCAGATCTCTCCCCCGGCGACGGAGCCGAAAGCCGAGGCCCAGCCCGACCAGAATGCCGTGATCAAGAACCAGAGAGGCAAAATCTGCATACTCAGCCTCGACGGCGGAGGCATGCGCGGGATTCTCTCCGGCAAGACCCTGGCGTATCTCGAGAACGCGCTCAAGCTCAAATCGGGGAACCCCGACGCCACAATCGCCGATTACTTCGACGTCTCCGCCGGCGCCGGCGTCGGGGGCATTTTCACCGCCATGCTCTTCGCCACCAGGGACCAGAGCCGGCCGATATTCAAGGCCGACGACACGTGGCGGTTCCTCGTTGATCAGGGGAAGAGGTTTTACAACAACAACCGCTCGTCGTCCTCCTCCTCCTCCTCCTCCGGCGGGTTCCTGCGGTGGTTCATTCGCGGCCGGTCGGGTTCCGGCTCCGGCTCCGGCTCGACCACGTCGGCCACGGCCGGGCTGGAGAAGGCGATGAGAGAGGCCTTCGCCGACAACAGCCGGAGCCTGACGCTGAGGGACACATTGAAGCCGGTTCTGATACCCTGCTACGACCTCTCCAGTACGGCGCCGTTTCTGTTCTCCCGGGCCGACGCGCTCGAGACCGAGAGCTACGACTTCCGCCTCTGGGAGGTCTGCCGCGCCACGTCAGCCGAGCCGGGGCTTTTCGAGCCGGTCCAAATGCGGTCCGTGAACAGCCAGACCAGTTGCCTGGCCGTGGACGGCGGCCTGGCCATGAGCAACCCGACCGCCGCGGCCATCACGCACGTGCTGCACAACAAGCAGGAGTTCCCGTTCGTGCGAGGCGTCGAGGACCTTTTGGTCCTTTCCATCGGGAGCGGGCAGTTTCTAGAAGCGAGCCACGAGTACGAGCAGGTCAAGAGGTGGAAGGCCAAGGAGTGGGCCCGCCCCATGGCCCGCATCTCCGGCGACGGCTCCGCTGACCTCGTTGACCAGTCCGTGGCCATGGCCTTCGGTCAGTCCGGCAGCACCAACTACGTCCGCATCCAGGCGAATGCGACAAGCTTGGGGAGGTGTGGTCCAAATGTAGATACAGACCCAAGTCCTAACAATGTCAAGATGCTGGTGGGATTAGCAGAGGATATGCTGAAGCAGAAGAATGTTGAATCGGTTCTGTTTGGCGGCAAGAGGATCGGCGAGCAGAGCAATTTCGAGAAGCTAGACTGGTTCGCCGGAGAACTTGTGCTGGAACATCAGAGGAGGAGTTGCAGAATAGCTCCCACTGTTGCCTTCAAGCAAGCTGCTCCTACTAAAGCCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008360 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010482 GO:0010494 GO:0010769 GO:0012505 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030856 GO:0031128 GO:0031129 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0040007 GO:0042802 GO:0042803 GO:0042814 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048468 GO:0048530 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051302 GO:0060284 GO:0060560 GO:0061458 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071826 GO:0071840 GO:0090558 GO:0090567 GO:0090626 GO:0090696 GO:0090697 GO:0090698 GO:0098791 GO:0099402 GO:1905392 GO:1990904 GO:2000024 GO:2000026 GO:2000039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2-Hacid_dh_C

Protein Analysis

469

Amino Acids

51.16

Weight (kDa)

6.5

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Patatin PF01734 74 - 296 2.9e-20 Patatin-like phospholipase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 947
AatII GACGTC 1 cut(s) 342
Acc36I ACCTGC 1 cut(s) 991
AccB1I GGYRCC 3 cut(s) 121, 350, 694
AccB7I CCANNNNNTGG 2 cut(s) 1026, 1087
AccBSI CCGCTC 2 cut(s) 480, 966
AccII CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
AclWI GGATC 1 cut(s) 1286
AcoI YGGCCR 8 cut(s) 407, 535, 576, 582, 840, 858, 882, 1089
AcuI CTGAAG 1 cut(s) 1256
AcvI CACGTG 2 cut(s) 432, 895
AcyI GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
AfaI GTAC 2 cut(s) 691, 995
AflIII ACRYGT 1 cut(s) 429
AgsI TTSAA 4 cut(s) 418, 655, 1253, 1381
AjiI CACGTC 2 cut(s) 573, 774
AjnI CCWGG 5 cut(s) 267, 392, 837, 855, 1134
AleI CACNNNNGTG 1 cut(s) 893
AloI GAACNNNNNNTCC 2 cut(s) 905, 937
AluBI AGCT 9 cut(s) 52, 57, 115, 295, 738, 1152, 1306, 1364, 1388
AluI AGCT 9 cut(s) 52, 57, 115, 295, 738, 1152, 1306, 1364, 1388
Alw26I GTCTC 2 cut(s) 346, 722
AlwI GGATC 1 cut(s) 1286
AlwNI CAGNNNCTG 1 cut(s) 115
Ama87I CYCGRG 3 cut(s) 278, 711, 725
ApaI GGGCCC 1 cut(s) 1033
ApeKI GCWGC 3 cut(s) 898, 1113, 1388
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 6 cut(s) 246, 289, 353, 697, 724, 770
AsuC2I CCSGG 5 cut(s) 143, 586, 712, 713, 786
AsuHPI GGTGA 1 cut(s) 364
AvaI CYCGRG 3 cut(s) 278, 711, 725
AvaII GGWCC 7 cut(s) 15, 397, 802, 813, 940, 949, 1166
BaeGI GKGCMC 1 cut(s) 1033
BalI TGGCCA 2 cut(s) 860, 1091
BanI GGYRCC 3 cut(s) 121, 350, 694
BanII GRGCYC 1 cut(s) 1033
BarI GAAGNNNNNNTAC 2 cut(s) 449, 481
BauI CACGAG 1 cut(s) 989
BbrPI CACGTG 2 cut(s) 432, 895
BbvCI CCTCAGC 1 cut(s) 641
BbvI GCAGC 3 cut(s) 885, 1125, 1375
BccI CCATC 2 cut(s) 893, 965
BceAI ACGGC 8 cut(s) 170, 247, 597, 682, 708, 827, 865, 1075
BcgI CGANNNNNNTGC 4 cut(s) 164, 198, 1261, 1295
BciT130I CCWGG 5 cut(s) 269, 394, 839, 857, 1136
BclI TGATCA 2 cut(s) 189, 448
BcnI CCSGG 5 cut(s) 143, 586, 712, 713, 786
BcoDI GTCTC 2 cut(s) 346, 722
BfaI CTAG 2 cut(s) 977, 1307
BfoI RGCGCY 2 cut(s) 354, 698
BfuAI ACCTGC 1 cut(s) 991
BglI GCCNNNNNGGC 1 cut(s) 231
BglII AGATCT 1 cut(s) 132
BisI GCNGC 9 cut(s) 535, 766, 853, 879, 882, 899, 1114, 1270, 1389
BlpI GCTNAGC 1 cut(s) 53
BlsI GCNGC 9 cut(s) 536, 767, 854, 880, 883, 900, 1115, 1271, 1390
Bme18I GGWCC 7 cut(s) 15, 397, 802, 813, 940, 949, 1166
BmeT110I CYCGRG 3 cut(s) 278, 711, 725
BmgBI CACGTC 2 cut(s) 573, 774
BmsI GCATC 3 cut(s) 1056, 1140, 1197
BoxI GACNNNNGTC 1 cut(s) 1188
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 3 cut(s) 98, 611, 670
Bpu10I CCTNAGC 1 cut(s) 641
Bpu1102I GCTNAGC 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 275
BpuMI CCSGG 5 cut(s) 143, 586, 712, 713, 786
BsaAI YACGTR 2 cut(s) 432, 895
BsaHI GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
BsaI GGTCTC 1 cut(s) 722
Bse118I RCCGGY 6 cut(s) 347, 353, 405, 537, 658, 799
Bse1I ACTGG 4 cut(s) 687, 831, 1081, 1316
BseBI CCWGG 5 cut(s) 269, 394, 839, 857, 1136
BseGI GGATG 1 cut(s) 1131
BseMII CTCAG 3 cut(s) 44, 235, 632
BseNI ACTGG 4 cut(s) 687, 831, 1081, 1316
BseRI GAGGAG 7 cut(s) 481, 484, 487, 490, 493, 1360, 1363
BseSI GKGCMC 1 cut(s) 1033
BseX3I CGGCCG 3 cut(s) 407, 535, 582
BseXI GCAGC 3 cut(s) 885, 1125, 1375
BseYI CCCAGC 1 cut(s) 168
BsgI GTGCAG 1 cut(s) 884
Bsh1236I CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
Bsh1285I CGRYCG 5 cut(s) 410, 538, 542, 585, 876
BshNI GGYRCC 3 cut(s) 121, 350, 694
BsiEI CGRYCG 5 cut(s) 410, 538, 542, 585, 876
BsiHKCI CYCGRG 3 cut(s) 278, 711, 725
BslFI GGGAC 2 cut(s) 410, 659
BsmAI GTCTC 2 cut(s) 346, 722
BsmBI CGTCTC 1 cut(s) 346
BsmFI GGGAC 2 cut(s) 410, 659
BsmI GAATGC 2 cut(s) 187, 1147
Bso31I GGTCTC 1 cut(s) 722
BsoBI CYCGRG 3 cut(s) 278, 711, 725
Bsp120I GGGCCC 1 cut(s) 1029
Bsp1286I GDGCHC 1 cut(s) 1033
Bsp143I GATC 5 cut(s) 106, 132, 189, 448, 1278
Bsp1720I GCTNAGC 1 cut(s) 53
Bsp19I CCATGG 2 cut(s) 1038, 1092
BspCNI CTCAG 3 cut(s) 45, 234, 633
BspFNI CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
BspMI ACCTGC 1 cut(s) 991
BspPI GGATC 1 cut(s) 1286
BspQI GCTCTTC 1 cut(s) 389
BspT107I GGYRCC 3 cut(s) 121, 350, 694
BspTNI GGTCTC 1 cut(s) 722
BsrBI CCGCTC 2 cut(s) 480, 966
BsrFI RCCGGY 6 cut(s) 347, 353, 405, 537, 658, 799
BsrI ACTGG 4 cut(s) 687, 831, 1081, 1316
BssAI RCCGGY 6 cut(s) 347, 353, 405, 537, 658, 799
BssMI GATC 5 cut(s) 106, 132, 189, 448, 1278
BssNI GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
BssSI CACGAG 1 cut(s) 989
BssT1I CCWWGG 3 cut(s) 1020, 1038, 1092
Bst2BI CACGAG 1 cut(s) 989
Bst2UI CCWGG 5 cut(s) 269, 394, 839, 857, 1136
Bst4CI ACNGT 1 cut(s) 1372
Bst6I CTCTTC 2 cut(s) 389, 452
BstACI GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
BstAPI GCANNNNNTGC 2 cut(s) 213, 898
BstBAI YACGTR 2 cut(s) 432, 895
BstDEI CTNAG 3 cut(s) 53, 221, 641
BstDSI CCRYGG 6 cut(s) 579, 843, 879, 1038, 1086, 1092
BstENI CCTNNNNNAGG 1 cut(s) 755
BstF5I GGATG 1 cut(s) 1131
BstFNI CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
BstH2I RGCGCY 2 cut(s) 354, 698
BstHHI GCGC 6 cut(s) 246, 289, 353, 697, 724, 770
BstKTI GATC 5 cut(s) 109, 135, 192, 451, 1281
BstMAI GTCTC 2 cut(s) 346, 722
BstMBI GATC 5 cut(s) 106, 132, 189, 448, 1278
BstMCI CGRYCG 5 cut(s) 410, 538, 542, 585, 876
BstNI CCWGG 5 cut(s) 269, 394, 839, 857, 1136
BstNSI RCATGY 1 cut(s) 244
BstPAI GACNNNNGTC 1 cut(s) 1188
BstSLI GKGCMC 1 cut(s) 1033
BstUI CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
BstV1I GCAGC 3 cut(s) 885, 1125, 1375
BstX2I RGATCY 1 cut(s) 132
BstXI CCANNNNNNTGG 1 cut(s) 838
BstYI RGATCY 1 cut(s) 132
BstZI CGGCCG 3 cut(s) 407, 535, 582
BtgI CCRYGG 6 cut(s) 579, 843, 879, 1038, 1086, 1092
BtgZI GCGATG 1 cut(s) 614
BtrI CACGTC 2 cut(s) 573, 774
BtsCI GGATG 1 cut(s) 1131
BtsIMutI CAGTG 1 cut(s) 1368
BveI ACCTGC 1 cut(s) 991
CaiI CAGNNNCTG 1 cut(s) 115
CfoI GCGC 6 cut(s) 246, 289, 353, 697, 724, 770
Cfr10I RCCGGY 6 cut(s) 347, 353, 405, 537, 658, 799
Cfr42I CCGCGG 1 cut(s) 882
Cfr9I CCCGGG 1 cut(s) 711
CpoI CGGWCCG 2 cut(s) 15, 813
CseI GACGC 5 cut(s) 323, 346, 646, 728, 922
Csp6I GTAC 2 cut(s) 690, 994
CspI CGGWCCG 2 cut(s) 15, 813
CviAII CATG 5 cut(s) 241, 379, 862, 1039, 1093
CviQI GTAC 2 cut(s) 690, 994
DdeI CTNAG 3 cut(s) 53, 221, 641
DinI GGCGCC 2 cut(s) 352, 696
DpnI GATC 5 cut(s) 108, 134, 191, 450, 1280
DpnII GATC 5 cut(s) 106, 132, 189, 448, 1278
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 8 cut(s) 407, 535, 576, 582, 840, 858, 882, 1089
EagI CGGCCG 3 cut(s) 407, 535, 582
Eam1104I CTCTTC 2 cut(s) 389, 452
EarI CTCTTC 2 cut(s) 389, 452
EciI GGCGGA 3 cut(s) 249, 334, 737
EclXI CGGCCG 3 cut(s) 407, 535, 582
Eco130I CCWWGG 3 cut(s) 1020, 1038, 1092
Eco147I AGGCCT 1 cut(s) 611
Eco24I GRGCYC 1 cut(s) 1033
Eco31I GGTCTC 1 cut(s) 722
Eco47I GGWCC 7 cut(s) 15, 397, 802, 813, 940, 949, 1166
Eco52I CGGCCG 3 cut(s) 407, 535, 582
Eco57I CTGAAG 1 cut(s) 1256
Eco72I CACGTG 2 cut(s) 432, 895
Eco88I CYCGRG 3 cut(s) 278, 711, 725
EcoNI CCTNNNNNAGG 1 cut(s) 755
EcoO109I RGGNCCY 1 cut(s) 940
EcoRII CCWGG 5 cut(s) 267, 392, 837, 855, 1134
EcoT14I CCWWGG 3 cut(s) 1020, 1038, 1092
EcoT38I GRGCYC 1 cut(s) 1033
EgeI GGCGCC 2 cut(s) 352, 696
EheI GGCGCC 2 cut(s) 352, 696
ErhI CCWWGG 3 cut(s) 1020, 1038, 1092
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 5 cut(s) 244, 382, 865, 1042, 1096
FaiI YATR 8 cut(s) 102, 218, 242, 380, 863, 1040, 1094, 1232
FaqI GGGAC 2 cut(s) 410, 659
FatI CATG 5 cut(s) 240, 378, 861, 1038, 1092
FauI CCCGC 5 cut(s) 239, 503, 959, 1040, 1052
FbaI TGATCA 2 cut(s) 189, 448
Fnu4HI GCNGC 9 cut(s) 535, 766, 853, 879, 882, 899, 1114, 1270, 1389
FokI GGATG 1 cut(s) 1118
FriOI GRGCYC 1 cut(s) 1033
Fsp4HI GCNGC 9 cut(s) 535, 766, 853, 879, 882, 899, 1114, 1270, 1389
FspBI CTAG 2 cut(s) 977, 1307
GlaI GCGC 6 cut(s) 245, 288, 352, 696, 723, 769
GluI GCNGC 9 cut(s) 535, 766, 853, 879, 882, 899, 1114, 1270, 1389
GsaI CCCAGC 1 cut(s) 172
GsuI CTGGAG 3 cut(s) 98, 611, 670
HaeII RGCGCY 2 cut(s) 354, 698
HgaI GACGC 5 cut(s) 323, 346, 646, 728, 922
HhaI GCGC 6 cut(s) 246, 289, 353, 697, 724, 770
Hin1I GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
Hin1II CATG 5 cut(s) 244, 382, 865, 1042, 1096
Hin6I GCGC 6 cut(s) 244, 287, 351, 695, 722, 768
HinP1I GCGC 6 cut(s) 244, 287, 351, 695, 722, 768
HincII GTYRAC 1 cut(s) 1078
HindII GTYRAC 1 cut(s) 1078
HindIII AAGCTT 1 cut(s) 1150
HinfI GANTC 5 cut(s) 5, 10, 73, 250, 1253
HphI GGTGA 1 cut(s) 364
Hpy166II GTNNAC 3 cut(s) 820, 847, 1078
Hpy188I TCNGA 4 cut(s) 19, 111, 666, 1344
Hpy8I GTNNAC 3 cut(s) 820, 847, 1078
HpyAV CCTTC 5 cut(s) 589, 622, 1009, 1108, 1387
HpyCH4III ACNGT 1 cut(s) 1372
HpyCH4IV ACGT 6 cut(s) 339, 431, 572, 773, 894, 1125
HpyCH4V TGCA 4 cut(s) 25, 216, 901, 1356
HpyF3I CTNAG 3 cut(s) 53, 221, 641
HpySE526I ACGT 6 cut(s) 339, 431, 572, 773, 894, 1125
Hsp92I GRCGYC 6 cut(s) 315, 339, 351, 357, 695, 933
Hsp92II CATG 5 cut(s) 244, 382, 865, 1042, 1096
HspAI GCGC 6 cut(s) 244, 287, 351, 695, 722, 768
KasI GGCGCC 2 cut(s) 350, 694
KroI GCCGGC 3 cut(s) 347, 353, 405
KroNI GCCGGC 3 cut(s) 349, 355, 407
Ksp22I TGATCA 2 cut(s) 189, 448
KspI CCGCGG 1 cut(s) 882
Kzo9I GATC 5 cut(s) 106, 132, 189, 448, 1278
LguI GCTCTTC 1 cut(s) 389
LmnI GCTCC 8 cut(s) 151, 557, 563, 630, 963, 1067, 1369, 1396
Lsp1109I GCAGC 3 cut(s) 885, 1125, 1375
LweI GCATC 3 cut(s) 1056, 1140, 1197
MaeI CTAG 2 cut(s) 977, 1307
MaeII ACGT 6 cut(s) 339, 431, 572, 773, 894, 1125
MalI GATC 5 cut(s) 108, 134, 191, 450, 1280
MbiI CCGCTC 2 cut(s) 480, 966
MboI GATC 5 cut(s) 106, 132, 189, 448, 1278
MboII GAAGA 3 cut(s) 376, 469, 1255
MflI RGATCY 1 cut(s) 132
MhlI GDGCHC 1 cut(s) 1033
MlsI TGGCCA 2 cut(s) 860, 1091
MluCI AATT 1 cut(s) 1294
MluNI TGGCCA 2 cut(s) 860, 1091
Mly113I GGCGCC 2 cut(s) 351, 695
MlyI GAGTC 1 cut(s) 4
Mox20I TGGCCA 2 cut(s) 860, 1091
MreI CGCCGGCG 2 cut(s) 347, 353
MroNI GCCGGC 3 cut(s) 347, 353, 405
MroXI GAANNNNTTC 1 cut(s) 1257
MscI TGGCCA 2 cut(s) 860, 1091
MseI TTAA 1 cut(s) 1408
MslI CAYNNNNRTG 2 cut(s) 377, 893
Msp20I TGGCCA 2 cut(s) 860, 1091
MspA1I CMGCKG 2 cut(s) 881, 1067
Mva1269I GAATGC 2 cut(s) 187, 1147
MvaI CCWGG 5 cut(s) 269, 394, 839, 857, 1136
MvnI CGCG 6 cut(s) 246, 287, 534, 722, 768, 881
NaeI GCCGGC 3 cut(s) 349, 355, 407
NarI GGCGCC 2 cut(s) 351, 695
NciI CCSGG 5 cut(s) 143, 586, 712, 713, 786
NcoI CCATGG 2 cut(s) 1038, 1092
NdeII GATC 5 cut(s) 106, 132, 189, 448, 1278
NgoMIV GCCGGC 3 cut(s) 347, 353, 405
NlaIII CATG 5 cut(s) 244, 382, 865, 1042, 1096
NmeAIII GCCGAG 3 cut(s) 57, 187, 805
NspI RCATGY 1 cut(s) 244
OliI CACNNNNGTG 1 cut(s) 893
PaeI GCATGC 1 cut(s) 244
PaeR7I CTCGAG 2 cut(s) 278, 725
PceI AGGCCT 1 cut(s) 611
PciSI GCTCTTC 1 cut(s) 389
PcsI WCGNNNNNNNCGW 1 cut(s) 930
PctI GAATGC 2 cut(s) 187, 1147
PdiI GCCGGC 3 cut(s) 349, 355, 407
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 4 cut(s) 5, 73, 250, 1253
PflFI GACNNNGTC 2 cut(s) 13, 571
PflMI CCANNNNNTGG 2 cut(s) 1026, 1087
PkrI GCNGC 9 cut(s) 536, 767, 854, 880, 883, 900, 1115, 1271, 1390
PleI GAGTC 1 cut(s) 4
PluTI GGCGCC 2 cut(s) 354, 698
PmaCI CACGTG 2 cut(s) 432, 895
PmlI CACGTG 2 cut(s) 432, 895
PpsI GAGTC 1 cut(s) 4
Ppu21I YACGTR 2 cut(s) 432, 895
PpuMI RGGWCCY 1 cut(s) 940
PshAI GACNNNNGTC 1 cut(s) 1188
Psp5II RGGWCCY 1 cut(s) 940
Psp6I CCWGG 5 cut(s) 267, 392, 837, 855, 1134
PspCI CACGTG 2 cut(s) 432, 895
PspFI CCCAGC 1 cut(s) 168
PspGI CCWGG 5 cut(s) 267, 392, 837, 855, 1134
PspOMI GGGCCC 1 cut(s) 1029
PspPPI RGGWCCY 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 132
PsyI GACNNNGTC 2 cut(s) 13, 571
RsaI GTAC 2 cut(s) 691, 995
RsaNI GTAC 2 cut(s) 690, 994
RseI CAYNNNNRTG 2 cut(s) 377, 893
Rsr2I CGGWCCG 2 cut(s) 15, 813
RsrII CGGWCCG 2 cut(s) 15, 813
SacII CCGCGG 1 cut(s) 882
SapI GCTCTTC 1 cut(s) 389
SaqAI TTAA 1 cut(s) 1408
SatI GCNGC 9 cut(s) 535, 766, 853, 879, 882, 899, 1114, 1270, 1389
Sau3AI GATC 5 cut(s) 106, 132, 189, 448, 1278
SchI GAGTC 1 cut(s) 4
SduI GDGCHC 1 cut(s) 1033
SfaNI GCATC 3 cut(s) 1056, 1140, 1197
SfoI GGCGCC 2 cut(s) 352, 696
Sfr274I CTCGAG 2 cut(s) 278, 725
Sfr303I CCGCGG 1 cut(s) 882
SgrAI CRCCGGYG 2 cut(s) 347, 353
SgrBI CCGCGG 1 cut(s) 882
SinI GGWCC 7 cut(s) 15, 397, 802, 813, 940, 949, 1166
SlaI CTCGAG 2 cut(s) 278, 725
SmaI CCCGGG 1 cut(s) 713
SmiMI CAYNNNNRTG 2 cut(s) 377, 893
SmlI CTYRAG 3 cut(s) 278, 290, 725
SmoI CTYRAG 3 cut(s) 278, 290, 725
SphI GCATGC 1 cut(s) 244
Sse9I AATT 1 cut(s) 1294
SseBI AGGCCT 1 cut(s) 611
SspDI GGCGCC 2 cut(s) 350, 694
SspMI CTAG 2 cut(s) 977, 1307
StuI AGGCCT 1 cut(s) 611
StyI CCWWGG 3 cut(s) 1020, 1038, 1092
TaaI ACNGT 1 cut(s) 1372
TaiI ACGT 6 cut(s) 342, 434, 575, 776, 897, 1128
TaqII GACCGA 2 cut(s) 746, 1091
TasI AATT 1 cut(s) 1294
TauI GCSGC 6 cut(s) 537, 768, 855, 881, 884, 1272
TfiI GAWTC 4 cut(s) 5, 73, 250, 1253
Tru1I TTAA 1 cut(s) 1408
Tru9I TTAA 1 cut(s) 1408
TscAI CASTG 1 cut(s) 1375
TseI GCWGC 3 cut(s) 898, 1113, 1388
TspDTI ATGAA 1 cut(s) 517
TspGWI ACGGA 3 cut(s) 164, 805, 1075
TspMI CCCGGG 1 cut(s) 711
TspRI CASTG 1 cut(s) 1375
Tth111I GACNNNGTC 2 cut(s) 13, 571
Van91I CCANNNNNTGG 2 cut(s) 1026, 1087
VpaK11BI GGWCC 7 cut(s) 15, 397, 802, 813, 940, 949, 1166
XagI CCTNNNNNAGG 1 cut(s) 755
XbaI TCTAGA 1 cut(s) 976
XceI RCATGY 1 cut(s) 244
XcmI CCANNNNNNNNNTGG 1 cut(s) 586
XhoI CTCGAG 2 cut(s) 278, 725
XmaI CCCGGG 1 cut(s) 711
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 2 cut(s) 977, 1307
ZraI GACGTC 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.