DNA RNA polymerases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g20082 FvH4_1g29103 FvH4_1g29431 FvH4_1g29732 FvH4_1g29761 FvH4_2g03391 FvH4_2g05501 FvH4_2g12792 FvH4_2g19253 FvH4_3g31261 FvH4_4g12741 FvH4_4g33447 FvH4_5g39021 FvH4_6g15231 FvH4_6g15232 FvH4_7g32351 |
| malus_domestica | MD07G1221100.v1.1 |
| prunus_persica | Prupe.8G084500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0097291 RchiOBHm_Chr3g0497281 RchiOBHm_Chr5g0015161 RchiOBHm_Chr7g0243211 RchiOBHm_Chr7g0243231 |
| rosa_roxburghii | Rroxscaffold_7G00175870 |
| rosa_wichuraiana | Rw4G015470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 190 |
| AclWI | GGATC | 2 cut(s) | 56, 113 |
| AcsI | RAATTY | 1 cut(s) | 25 |
| AfaI | GTAC | 2 cut(s) | 5, 233 |
| AgsI | TTSAA | 3 cut(s) | 31, 41, 103 |
| AluBI | AGCT | 1 cut(s) | 34 |
| AluI | AGCT | 1 cut(s) | 34 |
| AlwI | GGATC | 2 cut(s) | 56, 113 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| AseI | ATTAAT | 1 cut(s) | 15 |
| BbsI | GAAGAC | 2 cut(s) | 74, 78 |
| BccI | CCATC | 2 cut(s) | 52, 94 |
| BfmI | CTRYAG | 1 cut(s) | 252 |
| BoxI | GACNNNNGTC | 1 cut(s) | 78 |
| BpiI | GAAGAC | 2 cut(s) | 74, 78 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaBI | GATNNNNATC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 1 cut(s) | 243 |
| Bse8I | GATNNNNATC | 1 cut(s) | 60 |
| BseDI | CCNNGG | 1 cut(s) | 243 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseJI | GATNNNNATC | 1 cut(s) | 60 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BseYI | CCCAGC | 1 cut(s) | 215 |
| Bsp143I | GATC | 2 cut(s) | 61, 118 |
| BspACI | CCGC | 1 cut(s) | 190 |
| BspPI | GGATC | 2 cut(s) | 56, 113 |
| BssECI | CCNNGG | 1 cut(s) | 243 |
| BssMI | GATC | 2 cut(s) | 61, 118 |
| BssT1I | CCWWGG | 1 cut(s) | 243 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| BstDEI | CTNAG | 1 cut(s) | 225 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 2 cut(s) | 64, 121 |
| BstMBI | GATC | 2 cut(s) | 61, 118 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 78 |
| BstSFI | CTRYAG | 1 cut(s) | 252 |
| BstV2I | GAAGAC | 2 cut(s) | 74, 78 |
| BstX2I | RGATCY | 1 cut(s) | 118 |
| BstYI | RGATCY | 1 cut(s) | 118 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| Csp6I | GTAC | 2 cut(s) | 4, 232 |
| CviAII | CATG | 1 cut(s) | 170 |
| CviJI | RGCY | 2 cut(s) | 34, 242 |
| CviKI_1 | RGCY | 2 cut(s) | 34, 242 |
| CviQI | GTAC | 2 cut(s) | 4, 232 |
| DdeI | CTNAG | 1 cut(s) | 225 |
| DpnI | GATC | 2 cut(s) | 63, 120 |
| DpnII | GATC | 2 cut(s) | 61, 118 |
| Eco130I | CCWWGG | 1 cut(s) | 243 |
| EcoT14I | CCWWGG | 1 cut(s) | 243 |
| ErhI | CCWWGG | 1 cut(s) | 243 |
| FaeI | CATG | 1 cut(s) | 173 |
| FaiI | YATR | 5 cut(s) | 140, 171, 180, 194, 254 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 195, 227 |
| FatI | CATG | 1 cut(s) | 169 |
| FokI | GGATG | 1 cut(s) | 68 |
| GsaI | CCCAGC | 1 cut(s) | 219 |
| Hin1II | CATG | 1 cut(s) | 173 |
| HincII | GTYRAC | 1 cut(s) | 209 |
| HindII | GTYRAC | 1 cut(s) | 209 |
| Hpy166II | GTNNAC | 1 cut(s) | 209 |
| Hpy188III | TCNNGA | 3 cut(s) | 22, 65, 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 209 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyF3I | CTNAG | 1 cut(s) | 225 |
| Hsp92II | CATG | 1 cut(s) | 173 |
| Kzo9I | GATC | 2 cut(s) | 61, 118 |
| LmnI | GCTCC | 2 cut(s) | 109, 145 |
| LpnPI | CCDG | 2 cut(s) | 78, 229 |
| MalI | GATC | 2 cut(s) | 63, 120 |
| MboI | GATC | 2 cut(s) | 61, 118 |
| MboII | GAAGA | 3 cut(s) | 74, 83, 128 |
| MflI | RGATCY | 1 cut(s) | 118 |
| MluCI | AATT | 1 cut(s) | 25 |
| MnlI | CCTC | 3 cut(s) | 121, 124, 273 |
| MseI | TTAA | 1 cut(s) | 15 |
| NdeII | GATC | 2 cut(s) | 61, 118 |
| NlaIII | CATG | 1 cut(s) | 173 |
| PshAI | GACNNNNGTC | 1 cut(s) | 78 |
| PshBI | ATTAAT | 1 cut(s) | 15 |
| PspFI | CCCAGC | 1 cut(s) | 215 |
| PsuI | RGATCY | 1 cut(s) | 118 |
| RsaI | GTAC | 2 cut(s) | 5, 233 |
| RsaNI | GTAC | 2 cut(s) | 4, 232 |
| SaqAI | TTAA | 1 cut(s) | 15 |
| Sau3AI | GATC | 2 cut(s) | 61, 118 |
| SetI | ASST | 4 cut(s) | 36, 156, 208, 280 |
| SfcI | CTRYAG | 1 cut(s) | 252 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| Sse9I | AATT | 1 cut(s) | 25 |
| SsiI | CCGC | 1 cut(s) | 190 |
| StyI | CCWWGG | 1 cut(s) | 243 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaqI | TCGA | 3 cut(s) | 21, 93, 238 |
| TasI | AATT | 1 cut(s) | 25 |
| TatI | WGTACW | 1 cut(s) | 3 |
| Tru1I | TTAA | 1 cut(s) | 15 |
| Tru9I | TTAA | 1 cut(s) | 15 |
| VspI | ATTAAT | 1 cut(s) | 15 |
| XapI | RAATTY | 1 cut(s) | 25 |