Prupe.8G084500_v2.0.a1
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000291
Physical Location & Seq
Forward (+)
11764217 .. 11767942
3726 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G084500.1

Sequence Viewer

Length: 2952 bp
ATGGAATTATATGAACGGTTTTATAACTTAAAACAACGCGACATGTCTGTTCAAGAATATACTTCTGAGTTTGATAATCTTTCGCTTCGCGTTGGTTTGAATGAGACTAATGAACATATGACATCTCGTTACCTTTCTGGTTTGAATCAAACCATTCGAGATGAGCTGGGTGTGGTTCGCTTGTCCAACCTTGAAGATGCTCGACAATATGCCTTAATGGTCAAGCGTCAACAATTGCGACGTGGAGGAAGGAGATTTGTTTTTGGACGCACAGATAATTATTGGCAGAGAAATACAACAACTGTTCACGGGGTTCGAAGCAAACAAGGAGCCCGAACTGGTGGTAGGAACATGGTGGGCGTTGATAGGAGTGAAAAATGGAAGGAAATTGTGAAATTTGGGTCTCAGAACACTGCCGTTCCAAGCAATCTTAGGGGTGACAGTACATCACAAGTGCGTTGTTACACATGCGATGAGAAGGGGCACACCTCTTATGTACGAAGTGAGGTAACTGATTTTCCTGAACCAACCTATGATGATTTTGGTAATGAAGAGGAAGTTATTAATCTATTACCAGTTGAAGGAGAATCTTTAGTGGTCAGACGAGTGATGACAACTCCCAAAGTTGAGGAAGAAGATTGGCGGCATCATAATATATTCCGAACACGAGTCCTCTGTGGGGGAAAGGTGTGTAATGTGATCCTTGATGGAGGAAGTAGTGAGAACATCATCTCAAAGGAGGCAGTGGAAAAACTTAAGTTACCGATCGAGAAGCATCCTAATCCCTACAAGGTTGCATGGTTTCGAAAGGGGAACGAGGTATACCAGTTACTTCAAGTGTGGTGCGACGTTGTTCCTATGGATGCATGTCATATCTTATTAGGAAGACCTTGGTCGTTTGACAAAGACATGATTCACTACACTAAGGCCAACACCTATGTATTTCATCAAGATGGGAAGAAGTTGAGCTTGCAACCACTCAAAGAAGTGAAGAACACTCCTAAGGTAACCAAAGTTAGTAGGTTTTTAACATGCCATAATTTTGAACAAGAGAGCAAAGAAATGGGAATTATGTATGCACTTGTTACTAAAGAGATAGGAGCTGATCAACTGCTGAAATTTAATGAGTTTTCGAAAGAAATTCAACATATATTGATGGAATTCCAAGAGTTAGTTGGTGATGAATTACCACAAGGTTTACCAACAATGAGGAGTATTCAACATGCTATTGATTTGGTGCCTGGAGTAGCATTACCTAACCTTCTTGCATATCGAATGCCACCCACCCAACGAGCTGAAATTCAGAGGCAAGTAGAAGATTTAATTGCTAAAAGGTTAGTGCCATTGTTAACACCAAATAAAGAGCAAAAATGGAGGATGTGTGTGGACAGTCGTGTCATTAACAAGATTACGGTGAAATACCAATTCCCTATCCCTCGACTAGAAGATATGCTTGACATGCTGGCAGGATCTAAGGTGTTCTCCAAAATTGATTTGAGAAGTAGGTACCATCAAATTCGCTTGAGGAGTGGTGACGAATGGAAAATAGCTTTCAAAACTCCTAATGGCCTTTACAAGTATCAAACTTTTAAAGAGCACTTAATCCATTTACAGCAAGTTCTGGAGGCCCTTCGTAAGGAACAACTTTATATAAATCTTAAAAAGTGTTCCTTCTTGAGCAACAAAGTTGTATTCCTAGGCTTTGTTGTTTCAACTAATGGCTTGCAAGCAGACCCTGAGAAAATAAGAGCTTTTATGGAGTGGCTAGTGCCACAATCTGTAGGTGATGTTCGGAGTTTTCATGGATTGGTTTATAGGAGGTTCATCCGTGCTCCAGTACTTACTTTACTAGATTTTGAGAAGTTATTCACTATTGAATGCGATGCATCCCATGTTGGAATTGGGGCTGTTTTGAGTCAAGAAGGCAGACCCGTGGAGTTATTTAGTGAGAAAATTTATGCTTTGGTTCGGGCAATTCAACATTGGGAGCACTACCTCGCTTATAAAGAATTCGTGGTTTATTCTGATCATCAAGCTTTAAGGTACTTGAACTCTCAAAAGAAGTTGAATGCTCAGCATGTCAAATGGAGTTCATATCTTCAAGAATTCAATTTTTCTTTCAACTACAAGACTGGTGAATCTAACAAAGTTGCGGATGCTTTGAGCCGAAGGAATCTATTATTAACAACAATGAGTACTCAAGTTATTGGCTTTGAGGAGTTAAAAGAACAATATGCTACGGATCCATATTTCAGCTCTATAATGTTACCATTTGGAATGCATGATGGGTATTTATTCAAAGGAAATTTGTTGTGTATTCTCGAGGGATCATTACGTGAACAAATCGTTAGGGAGCTTCATGGTAATGGATTAGGAGGACATTTCGAAAGGGATAAAACATTGGCTATGGTGACTGATCGTTATTATTGGTCTAGAATGTACAAGGATGTTGATAGACTGGTCCGTAAGTGTCAAATTTGTCAGTTTAGCAAAGGAAGTTCACAAAATACAGGACTTCCAAAAACAGCAAGAGGATATGACAGTCTTTTTGTCGTGGTAGATCGCTTCTCCAAGATGGCACATTTCATTCCATGTGCTAGAACAGCAGATGCCACACATATAGCTGATTTTTTCTTCAAAGAAGTGGTAAGACTACATGGTGTGCCAACATCTATTATTTCAGATAGGGATGTGAGGGTGAGTGATGAAGGAGAGGGTTTTGCGGATCACGTGAAAAGAGTGCATGAAGAAGTAAAGGCAGCTATAAAGGCCAATAATGAGTCATATGCAGCTGCTGCAAATCAACATCGGAGAATCAAAGATTTTGAAGAAGGTGATATGGTTTTGGTGCAATTGAGACGAGACAAATTTCCGAAAGGCACATACCATAAATTGAAGTCTAAAAAGTTTGGGCCATGCCAGGTGTTGAAGAAAATTAGTTCAAACGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

984

Amino Acids

113.72

Weight (kDa)

9.11

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 24, 2004
AasI GACNNNNNNGTC 1 cut(s) 1394
Acc65I GGTACC 1 cut(s) 1506
AccB1I GGYRCC 2 cut(s) 1237, 1506
AccI GTMKAC 1 cut(s) 822
AccII CGCG 2 cut(s) 39, 90
AciI CCGC 3 cut(s) 643, 2153, 2723
AclWI GGATC 6 cut(s) 694, 1477, 2237, 2250, 2335, 2733
AcvI CACGTG 1 cut(s) 2731
AfaI GTAC 7 cut(s) 445, 498, 1508, 1839, 2045, 2197, 2441
AfiI CCNNNNNNNGG 3 cut(s) 581, 679, 1636
AflII CTTAAG 1 cut(s) 755
AflIII ACRYGT 1 cut(s) 42
AjiI CACGTC 1 cut(s) 242
AjnI CCWGG 2 cut(s) 1240, 2919
Alw21I GWGCWC 3 cut(s) 1599, 1834, 1992
Alw26I GTCTC 4 cut(s) 98, 408, 2851, 2856
AlwI GGATC 6 cut(s) 694, 1477, 2237, 2250, 2335, 2733
AlwNI CAGNNNCTG 2 cut(s) 1736, 2795
Ama87I CYCGRG 1 cut(s) 2321
AoxI GGCC 5 cut(s) 927, 1567, 1626, 2769, 2912
ApeKI GCWGC 4 cut(s) 2759, 2789, 2792, 2795
ArsI GACNNNNNNTTYG 2 cut(s) 2531, 2563
AseI ATTAAT 1 cut(s) 564
Asp700I GAANNNNTTC 1 cut(s) 1865
Asp718I GGTACC 1 cut(s) 1506
AspA2I CCTAGG 1 cut(s) 1696
AspS9I GGNCC 3 cut(s) 1627, 2461, 2912
AsuHPI GGTGA 9 cut(s) 449, 1190, 1426, 1544, 1796, 2147, 2422, 2710, 2846
AsuII TTCGAA 4 cut(s) 316, 805, 1133, 2385
AvaI CYCGRG 1 cut(s) 2321
AvaII GGWCC 1 cut(s) 2461
AvrII CCTAGG 1 cut(s) 1696
AxyI CCTNAGG 1 cut(s) 1002
BaeGI GKGCMC 1 cut(s) 486
BamHI GGATCC 1 cut(s) 2242
BanI GGYRCC 2 cut(s) 1237, 1506
BanII GRGCYC 1 cut(s) 334
BauI CACGAG 1 cut(s) 666
BbrPI CACGTG 1 cut(s) 2731
BbsI GAAGAC 1 cut(s) 892
Bbv12I GWGCWC 3 cut(s) 1599, 1834, 1992
BbvI GCAGC 4 cut(s) 2771, 2779, 2782, 2801
BccI CCATC 6 cut(s) 701, 947, 1150, 1518, 2279, 2569
BceAI ACGGC 1 cut(s) 401
BciT130I CCWGG 2 cut(s) 1242, 2921
BclI TGATCA 2 cut(s) 1105, 2026
BcoDI GTCTC 4 cut(s) 98, 408, 2851, 2856
BfaI CTAG 6 cut(s) 1442, 1697, 1766, 1850, 2433, 2598
BfmI CTRYAG 1 cut(s) 1779
BfrI CTTAAG 1 cut(s) 755
BisI GCNGC 5 cut(s) 644, 2760, 2790, 2793, 2796
BlnI CCTAGG 1 cut(s) 1696
BlpI GCTNAGC 1 cut(s) 2073
BlsI GCNGC 5 cut(s) 645, 2761, 2791, 2794, 2797
BmcAI AGTACT 2 cut(s) 1839, 2197
Bme1390I CCNGG 2 cut(s) 1242, 2921
Bme18I GGWCC 1 cut(s) 2461
BmeT110I CYCGRG 1 cut(s) 2321
BmgBI CACGTC 1 cut(s) 242
BmgT120I GGNCC 3 cut(s) 1627, 2461, 2912
BmiI GGNNCC 4 cut(s) 331, 1239, 1508, 2244
BmrFI CCNGG 2 cut(s) 1242, 2921
BmsI GCATC 8 cut(s) 187, 655, 784, 853, 1873, 1895, 2146, 2599
BoxI GACNNNNGTC 1 cut(s) 892
BpiI GAAGAC 1 cut(s) 892
BpmI CTGGAG 3 cut(s) 1263, 1643, 1818
Bpu1102I GCTNAGC 1 cut(s) 2073
Bpu14I TTCGAA 4 cut(s) 316, 805, 1133, 2385
BpuEI CTTGAG 3 cut(s) 1543, 1696, 2184
BsaAI YACGTR 2 cut(s) 2336, 2731
BsaI GGTCTC 1 cut(s) 408
BsaJI CCNNGG 3 cut(s) 890, 1696, 1932
BsaXI ACNNNNNCTCC 2 cut(s) 1366, 1396
Bsc4I CCNNNNNNNGG 3 cut(s) 581, 679, 1636
Bse1I ACTGG 6 cut(s) 343, 575, 826, 1835, 2137, 2463
Bse21I CCTNAGG 1 cut(s) 1002
BseBI CCWGG 2 cut(s) 1242, 2921
BseDI CCNNGG 3 cut(s) 890, 1696, 1932
BseGI GGATG 8 cut(s) 775, 868, 1383, 1824, 1886, 2161, 2452, 2695
BseLI CCNNNNNNNGG 3 cut(s) 581, 679, 1636
BseMII CTCAG 4 cut(s) 57, 419, 1728, 2087
BseNI ACTGG 6 cut(s) 343, 575, 826, 1835, 2137, 2463
BseRI GAGGAG 3 cut(s) 1225, 1540, 2231
BseSI GKGCMC 1 cut(s) 486
BseXI GCAGC 4 cut(s) 2771, 2779, 2782, 2801
BseYI CCCAGC 1 cut(s) 166
Bsh1236I CGCG 2 cut(s) 39, 90
Bsh1285I CGRYCG 1 cut(s) 768
BshFI GGCC 5 cut(s) 929, 1569, 1628, 2771, 2914
BshNI GGYRCC 2 cut(s) 1237, 1506
BsiEI CGRYCG 1 cut(s) 768
BsiHKAI GWGCWC 3 cut(s) 1599, 1834, 1992
BsiHKCI CYCGRG 1 cut(s) 2321
BslI CCNNNNNNNGG 3 cut(s) 581, 679, 1636
BsmAI GTCTC 4 cut(s) 98, 408, 2851, 2856
BsmBI CGTCTC 1 cut(s) 2851
BsmI GAATGC 4 cut(s) 1281, 1883, 2074, 2283
BsnI GGCC 5 cut(s) 929, 1569, 1628, 2771, 2914
Bso31I GGTCTC 1 cut(s) 408
BsoBI CYCGRG 1 cut(s) 2321
Bsp119I TTCGAA 4 cut(s) 316, 805, 1133, 2385
Bsp1286I GDGCHC 5 cut(s) 334, 486, 1599, 1834, 1992
Bsp1407I TGTACA 1 cut(s) 2439
Bsp1720I GCTNAGC 1 cut(s) 2073
BspACI CCGC 3 cut(s) 643, 2153, 2723
BspANI GGCC 5 cut(s) 929, 1569, 1628, 2771, 2914
BspCNI CTCAG 4 cut(s) 58, 418, 1729, 2086
BspFNI CGCG 2 cut(s) 39, 90
BspLI GGNNCC 4 cut(s) 331, 1239, 1508, 2244
BspPI GGATC 6 cut(s) 694, 1477, 2237, 2250, 2335, 2733
BspT104I TTCGAA 4 cut(s) 316, 805, 1133, 2385
BspT107I GGYRCC 2 cut(s) 1237, 1506
BspTI CTTAAG 1 cut(s) 755
BspTNI GGTCTC 1 cut(s) 408
BsrGI TGTACA 1 cut(s) 2439
BsrI ACTGG 6 cut(s) 343, 575, 826, 1835, 2137, 2463
BssECI CCNNGG 3 cut(s) 890, 1696, 1932
BssNAI GTATAC 1 cut(s) 823
BssSI CACGAG 1 cut(s) 666
BssT1I CCWWGG 2 cut(s) 890, 1696
Bst1107I GTATAC 1 cut(s) 823
Bst2BI CACGAG 1 cut(s) 666
Bst2UI CCWGG 2 cut(s) 1242, 2921
Bst4CI ACNGT 6 cut(s) 18, 304, 443, 1391, 1414, 2543
Bst6I CTCTTC 1 cut(s) 546
BstAFI CTTAAG 1 cut(s) 755
BstAPI GCANNNNNTGC 1 cut(s) 2795
BstAUI TGTACA 1 cut(s) 2439
BstBAI YACGTR 2 cut(s) 2336, 2731
BstBI TTCGAA 4 cut(s) 316, 805, 1133, 2385
BstC8I GCNNGC 4 cut(s) 971, 1464, 1724, 1728
BstDEI CTNAG 8 cut(s) 66, 405, 431, 924, 1002, 1473, 1737, 2073
BstDSI CCRYGG 1 cut(s) 1932
BstEII GGTNACC 1 cut(s) 1006
BstENI CCTNNNNNAGG 1 cut(s) 1634
BstF5I GGATG 8 cut(s) 775, 868, 1383, 1824, 1886, 2161, 2452, 2695
BstFNI CGCG 2 cut(s) 39, 90
BstMAI GTCTC 4 cut(s) 98, 408, 2851, 2856
BstMCI CGRYCG 1 cut(s) 768
BstMWI GCNNNNNNNGC 4 cut(s) 1459, 2603, 2768, 2795
BstNI CCWGG 2 cut(s) 1242, 2921
BstNSI RCATGY 7 cut(s) 46, 471, 870, 1035, 1226, 1462, 2081
BstPAI GACNNNNGTC 1 cut(s) 892
BstPI GGTNACC 1 cut(s) 1006
BstSCI CCNGG 2 cut(s) 1240, 2919
BstSFI CTRYAG 1 cut(s) 1779
BstSLI GKGCMC 1 cut(s) 486
BstUI CGCG 2 cut(s) 39, 90
BstV1I GCAGC 4 cut(s) 2771, 2779, 2782, 2801
BstV2I GAAGAC 1 cut(s) 892
BstX2I RGATCY 2 cut(s) 1469, 2242
BstYI RGATCY 2 cut(s) 1469, 2242
BstZ17I GTATAC 1 cut(s) 823
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 5 cut(s) 929, 1569, 1628, 2771, 2914
BtgI CCRYGG 1 cut(s) 1932
BtgZI GCGATG 2 cut(s) 486, 1896
BtrI CACGTC 1 cut(s) 242
BtsCI GGATG 8 cut(s) 775, 868, 1383, 1824, 1886, 2161, 2452, 2695
BtsI GCAGTG 2 cut(s) 411, 750
BtsIMutI CAGTG 2 cut(s) 411, 750
Cac8I GCNNGC 4 cut(s) 971, 1464, 1724, 1728
CaiI CAGNNNCTG 2 cut(s) 1736, 2795
Cfr13I GGNCC 3 cut(s) 1627, 2461, 2912
CseI GACGC 2 cut(s) 215, 276
Csp6I GTAC 7 cut(s) 444, 497, 1507, 1838, 2044, 2196, 2440
CviQI GTAC 7 cut(s) 444, 497, 1507, 1838, 2044, 2196, 2440
DdeI CTNAG 8 cut(s) 66, 405, 431, 924, 1002, 1473, 1737, 2073
DraI TTTAAA 1 cut(s) 1591
DrdI GACNNNNNNGTC 1 cut(s) 1394
DseDI GACNNNNNNGTC 1 cut(s) 1394
Eam1104I CTCTTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 546
Eco130I CCWWGG 2 cut(s) 890, 1696
Eco24I GRGCYC 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 408
Eco47I GGWCC 1 cut(s) 2461
Eco72I CACGTG 1 cut(s) 2731
Eco81I CCTNAGG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 2321
Eco91I GGTNACC 1 cut(s) 1006
EcoNI CCTNNNNNAGG 1 cut(s) 1634
EcoO109I RGGNCCY 1 cut(s) 1627
EcoO65I GGTNACC 1 cut(s) 1006
EcoRI GAATTC 3 cut(s) 1160, 2009, 2105
EcoRII CCWGG 2 cut(s) 1240, 2919
EcoT14I CCWWGG 2 cut(s) 890, 1696
EcoT22I ATGCAT 3 cut(s) 868, 1888, 2283
EcoT38I GRGCYC 1 cut(s) 334
ErhI CCWWGG 2 cut(s) 890, 1696
Esp3I CGTCTC 1 cut(s) 2851
FalI AAGNNNNNCTT 6 cut(s) 953, 985, 1437, 1469, 1655, 1687
FauNDI CATATG 2 cut(s) 117, 2785
FbaI TGATCA 2 cut(s) 1105, 2026
FblI GTMKAC 1 cut(s) 822
Fnu4HI GCNGC 5 cut(s) 644, 2760, 2790, 2793, 2796
FokI GGATG 8 cut(s) 762, 875, 1390, 1811, 1873, 2168, 2459, 2702
FriOI GRGCYC 1 cut(s) 334
Fsp4HI GCNGC 5 cut(s) 644, 2760, 2790, 2793, 2796
FspBI CTAG 6 cut(s) 1442, 1697, 1766, 1850, 2433, 2598
GluI GCNGC 5 cut(s) 644, 2760, 2790, 2793, 2796
GsaI CCCAGC 1 cut(s) 170
GsuI CTGGAG 3 cut(s) 1263, 1643, 1818
HaeIII GGCC 5 cut(s) 929, 1569, 1628, 2771, 2914
HgaI GACGC 2 cut(s) 215, 276
HincII GTYRAC 2 cut(s) 230, 1350
HindII GTYRAC 2 cut(s) 230, 1350
HindIII AAGCTT 1 cut(s) 2034
HinfI GANTC 9 cut(s) 145, 587, 669, 913, 1915, 2138, 2173, 2780, 2814
HpaI GTTAAC 1 cut(s) 1350
HphI GGTGA 9 cut(s) 449, 1190, 1426, 1544, 1796, 2147, 2422, 2710, 2846
Hpy166II GTNNAC 8 cut(s) 230, 307, 823, 1199, 1350, 1387, 2339, 2501
Hpy8I GTNNAC 8 cut(s) 230, 307, 823, 1199, 1350, 1387, 2339, 2501
Hpy99I CGWCG 2 cut(s) 243, 851
HpyCH4III ACNGT 6 cut(s) 18, 304, 443, 1391, 1414, 2543
HpyCH4IV ACGT 4 cut(s) 241, 849, 2335, 2730
HpyF10VI GCNNNNNNNGC 4 cut(s) 1459, 2603, 2768, 2795
HpyF3I CTNAG 8 cut(s) 66, 405, 431, 924, 1002, 1473, 1737, 2073
HpySE526I ACGT 4 cut(s) 241, 849, 2335, 2730
KpnI GGTACC 1 cut(s) 1510
Ksp22I TGATCA 2 cut(s) 1105, 2026
KspAI GTTAAC 1 cut(s) 1350
LmnI GCTCC 5 cut(s) 329, 1100, 1837, 1987, 2353
Lsp1109I GCAGC 4 cut(s) 2771, 2779, 2782, 2801
LweI GCATC 8 cut(s) 187, 655, 784, 853, 1873, 1895, 2146, 2599
MaeI CTAG 6 cut(s) 1442, 1697, 1766, 1850, 2433, 2598
MaeII ACGT 4 cut(s) 241, 849, 2335, 2730
MfeI CAATTG 2 cut(s) 233, 2852
MflI RGATCY 2 cut(s) 1469, 2242
MhlI GDGCHC 5 cut(s) 334, 486, 1599, 1834, 1992
MlyI GAGTC 3 cut(s) 678, 1924, 2789
MmeI TCCRAC 2 cut(s) 210, 1876
Mph1103I ATGCAT 3 cut(s) 868, 1888, 2283
MroXI GAANNNNTTC 1 cut(s) 1865
MslI CAYNNNNRTG 2 cut(s) 951, 2364
MspA1I CMGCKG 1 cut(s) 2792
MspCI CTTAAG 1 cut(s) 755
MspR9I CCNGG 2 cut(s) 1242, 2921
MunI CAATTG 2 cut(s) 233, 2852
Mva1269I GAATGC 4 cut(s) 1281, 1883, 2074, 2283
MvaI CCWGG 2 cut(s) 1242, 2921
MvnI CGCG 2 cut(s) 39, 90
MwoI GCNNNNNNNGC 4 cut(s) 1459, 2603, 2768, 2795
NdeI CATATG 2 cut(s) 117, 2785
NlaIV GGNNCC 4 cut(s) 331, 1239, 1508, 2244
NmuCI GTSAC 3 cut(s) 437, 1532, 2410
NsiI ATGCAT 3 cut(s) 868, 1888, 2283
NspI RCATGY 7 cut(s) 46, 471, 870, 1035, 1226, 1462, 2081
NspV TTCGAA 4 cut(s) 316, 805, 1133, 2385
PaeR7I CTCGAG 1 cut(s) 2321
PciI ACATGT 1 cut(s) 42
PctI GAATGC 4 cut(s) 1281, 1883, 2074, 2283
PdmI GAANNNNTTC 1 cut(s) 1865
PfeI GAWTC 6 cut(s) 145, 587, 913, 2138, 2173, 2814
PkrI GCNGC 5 cut(s) 645, 2761, 2791, 2794, 2797
Ple19I CGATCG 1 cut(s) 768
PleI GAGTC 3 cut(s) 677, 1923, 2788
PmaCI CACGTG 1 cut(s) 2731
PmlI CACGTG 1 cut(s) 2731
PpsI GAGTC 3 cut(s) 677, 1923, 2788
Ppu21I YACGTR 2 cut(s) 2336, 2731
PscI ACATGT 1 cut(s) 42
PshAI GACNNNNGTC 1 cut(s) 892
PshBI ATTAAT 1 cut(s) 564
PsiI TTATAA 2 cut(s) 24, 2004
Psp6I CCWGG 2 cut(s) 1240, 2919
PspCI CACGTG 1 cut(s) 2731
PspEI GGTNACC 1 cut(s) 1006
PspFI CCCAGC 1 cut(s) 166
PspGI CCWGG 2 cut(s) 1240, 2919
PspN4I GGNNCC 4 cut(s) 331, 1239, 1508, 2244
PspPI GGNCC 3 cut(s) 1627, 2461, 2912
PsrI GAACNNNNNNTAC 4 cut(s) 806, 838, 1773, 1805
PstNI CAGNNNCTG 2 cut(s) 1736, 2795
PsuI RGATCY 2 cut(s) 1469, 2242
PvuI CGATCG 1 cut(s) 768
PvuII CAGCTG 1 cut(s) 2792
RsaI GTAC 7 cut(s) 445, 498, 1508, 1839, 2045, 2197, 2441
RsaNI GTAC 7 cut(s) 444, 497, 1507, 1838, 2044, 2196, 2440
RseI CAYNNNNRTG 2 cut(s) 951, 2364
SatI GCNGC 5 cut(s) 644, 2760, 2790, 2793, 2796
Sau96I GGNCC 3 cut(s) 1627, 2461, 2912
ScaI AGTACT 2 cut(s) 1839, 2197
SchI GAGTC 3 cut(s) 678, 1924, 2789
ScrFI CCNGG 2 cut(s) 1242, 2921
SduI GDGCHC 5 cut(s) 334, 486, 1599, 1834, 1992
SfaNI GCATC 8 cut(s) 187, 655, 784, 853, 1873, 1895, 2146, 2599
SfcI CTRYAG 1 cut(s) 1779
Sfr274I CTCGAG 1 cut(s) 2321
SfuI TTCGAA 4 cut(s) 316, 805, 1133, 2385
SinI GGWCC 1 cut(s) 2461
SlaI CTCGAG 1 cut(s) 2321
SmiMI CAYNNNNRTG 2 cut(s) 951, 2364
SmlI CTYRAG 5 cut(s) 755, 1522, 1675, 2199, 2321
SmoI CTYRAG 5 cut(s) 755, 1522, 1675, 2199, 2321
SsiI CCGC 3 cut(s) 643, 2153, 2723
SspMI CTAG 6 cut(s) 1442, 1697, 1766, 1850, 2433, 2598
StyD4I CCNGG 2 cut(s) 1240, 2919
StyI CCWWGG 2 cut(s) 890, 1696
TaaI ACNGT 6 cut(s) 18, 304, 443, 1391, 1414, 2543
TaiI ACGT 4 cut(s) 244, 852, 2338, 2733
TatI WGTACW 4 cut(s) 443, 1837, 2195, 2439
TauI GCSGC 1 cut(s) 646
TfiI GAWTC 6 cut(s) 145, 587, 913, 2138, 2173, 2814
TscAI CASTG 2 cut(s) 418, 750
TseFI GTSAC 3 cut(s) 437, 1532, 2410
TseI GCWGC 4 cut(s) 2759, 2789, 2792, 2795
Tsp45I GTSAC 3 cut(s) 437, 1532, 2410
TspGWI ACGGA 3 cut(s) 1817, 2255, 2453
TspRI CASTG 2 cut(s) 418, 750
Vha464I CTTAAG 1 cut(s) 755
VpaK11BI GGWCC 1 cut(s) 2461
VspI ATTAAT 1 cut(s) 564
XagI CCTNNNNNAGG 1 cut(s) 1634
XbaI TCTAGA 1 cut(s) 2432
XceI RCATGY 7 cut(s) 46, 471, 870, 1035, 1226, 1462, 2081
XcmI CCANNNNNNNNNTGG 2 cut(s) 1172, 1898
XhoI CTCGAG 1 cut(s) 2321
XmaJI CCTAGG 1 cut(s) 1696
XmiI GTMKAC 1 cut(s) 822
XmnI GAANNNNTTC 1 cut(s) 1865
XspI CTAG 6 cut(s) 1442, 1697, 1766, 1850, 2433, 2598
ZrmI AGTACT 2 cut(s) 1839, 2197
Zsp2I ATGCAT 3 cut(s) 868, 1888, 2283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.