Rorug02G0252200

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
26254666 .. 26259439
4774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0252200.1

Sequence Viewer

Length: 678 bp
ATGGGAAGAAAAAGAGGTAAGAAAACTGTACAGAAAGTCGCTGAGGAAATTGAGCCCCAGAATGAGAGGCAGGAAGATCAGTTTACGGACCCAGATGTTGAGCGACGAATTTCTGCCGTTAAGGCTATTAGTGACGTGGAGATTGAACACGTGCTGACCAAATTGCGTTTGCTTCGCTCGTATTGCACCAAGGAGCAGCGGCAAACACCTGTTTTGCAATTTTTTAAAGAAAATTTTCCGAATTTGAAATTTGTAAAAAATGAAGAAAATGGACATCTAGAACTTGAGTGGATTGGTGACGATGGCAAAGTATCCATGAATGATGGAACAGATTTACATTTATCTCTTCTTAACCAGTTCTCTATGGCTCATTCTGGTTGCCAAACTTTGGGTGGCTTTGAGTTTTCTAGTAAAGCAGAGAGATCAAGGTTTTTGGGTGCTGATAATCTGCAGATCAGAGATTTTGTTTTAGAGGAGCCATTTGACACTCAGATGCTAGGGCAGCATGATTCTCTCCAAACTCCCGGGGTTAGTAGCCAGAGGCTATCTATTGGGGTCACACCCAAAACGCGAAGGCTCCCAAAGCCTGGGGAGACCCTTTTATCTGTCCATGGATCCCCCCTTGGTGTTTACAAGGAAGATGATATGGAAGCCATAAATGAGTCAGAAGAGGGATGA

Protein Analysis

225

Amino Acids

25.5

Weight (kDa)

5.27

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 388, 587
AccII CGCG 1 cut(s) 571
AciI CCGC 1 cut(s) 199
AclWI GGATC 2 cut(s) 609, 622
AcsI RAATTY 4 cut(s) 108, 232, 241, 248
AcvI CACGTG 1 cut(s) 151
AfaI GTAC 1 cut(s) 30
AfiI CCNNNNNNNGG 2 cut(s) 388, 587
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 2 cut(s) 146, 247
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 1 cut(s) 586
Alw26I GTCTC 1 cut(s) 587
AlwI GGATC 2 cut(s) 609, 622
Ama87I CYCGRG 1 cut(s) 524
ApeKI GCWGC 2 cut(s) 196, 502
ApoI RAATTY 4 cut(s) 108, 232, 241, 248
Asp700I GAANNNNTTC 1 cut(s) 234
AspS9I GGNCC 1 cut(s) 88
AsuC2I CCSGG 2 cut(s) 525, 526
AsuHPI GGTGA 1 cut(s) 308
AvaI CYCGRG 1 cut(s) 524
AvaII GGWCC 1 cut(s) 88
BamHI GGATCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 57
BbrPI CACGTG 1 cut(s) 151
BbvCI CCTCAGC 1 cut(s) 42
BbvI GCAGC 2 cut(s) 208, 514
BccI CCATC 2 cut(s) 296, 317
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 588
BciVI GTATCC 1 cut(s) 322
BcnI CCSGG 2 cut(s) 525, 526
BcoDI GTCTC 1 cut(s) 587
BfaI CTAG 3 cut(s) 278, 408, 497
BfmI CTRYAG 1 cut(s) 449
BfuI GTATCC 1 cut(s) 322
BglI GCCNNNNNGGC 1 cut(s) 122
BisI GCNGC 3 cut(s) 197, 200, 503
BlsI GCNGC 3 cut(s) 198, 201, 504
Bme1390I CCNGG 3 cut(s) 525, 526, 588
Bme18I GGWCC 1 cut(s) 88
BmeT110I CYCGRG 1 cut(s) 524
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 88
BmiI GGNNCC 4 cut(s) 90, 477, 578, 616
BmrFI CCNGG 3 cut(s) 525, 526, 588
BmsI GCATC 1 cut(s) 483
Bpu10I CCTNAGC 1 cut(s) 42
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 2 cut(s) 525, 526
BsaAI YACGTR 1 cut(s) 151
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 6 cut(s) 189, 524, 525, 587, 610, 622
Bsc4I CCNNNNNNNGG 2 cut(s) 388, 587
Bse1I ACTGG 1 cut(s) 355
BseBI CCWGG 1 cut(s) 588
BseDI CCNNGG 6 cut(s) 189, 524, 525, 587, 610, 622
BseLI CCNNNNNNNGG 2 cut(s) 388, 587
BseMII CTCAG 2 cut(s) 33, 503
BseNI ACTGG 1 cut(s) 355
BseRI GAGGAG 1 cut(s) 488
BseXI GCAGC 2 cut(s) 208, 514
Bsh1236I CGCG 1 cut(s) 571
BsiHKCI CYCGRG 1 cut(s) 524
BsiSI CCGG 1 cut(s) 525
BslI CCNNNNNNNGG 2 cut(s) 388, 587
BsmAI GTCTC 1 cut(s) 587
Bso31I GGTCTC 1 cut(s) 587
BsoBI CYCGRG 1 cut(s) 524
Bsp1286I GDGCHC 1 cut(s) 57
Bsp1407I TGTACA 1 cut(s) 28
Bsp143I GATC 4 cut(s) 76, 422, 453, 614
Bsp19I CCATGG 1 cut(s) 610
BspACI CCGC 1 cut(s) 199
BspCNI CTCAG 2 cut(s) 34, 502
BspFNI CGCG 1 cut(s) 571
BspLI GGNNCC 4 cut(s) 90, 477, 578, 616
BspMAI CTGCAG 1 cut(s) 453
BspPI GGATC 2 cut(s) 609, 622
BspTNI GGTCTC 1 cut(s) 587
BsrGI TGTACA 1 cut(s) 28
BsrI ACTGG 1 cut(s) 355
BssECI CCNNGG 6 cut(s) 189, 524, 525, 587, 610, 622
BssMI GATC 4 cut(s) 76, 422, 453, 614
BssT1I CCWWGG 3 cut(s) 189, 610, 622
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 1 cut(s) 28
Bst6I CTCTTC 2 cut(s) 351, 663
BstAUI TGTACA 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 151
BstDEI CTNAG 2 cut(s) 42, 489
BstDSI CCRYGG 1 cut(s) 610
BstFNI CGCG 1 cut(s) 571
BstKTI GATC 4 cut(s) 79, 425, 456, 617
BstMAI GTCTC 1 cut(s) 587
BstMBI GATC 4 cut(s) 76, 422, 453, 614
BstMWI GCNNNNNNNGC 4 cut(s) 122, 183, 502, 583
BstNI CCWGG 1 cut(s) 588
BstSCI CCNGG 3 cut(s) 523, 524, 586
BstSFI CTRYAG 1 cut(s) 449
BstUI CGCG 1 cut(s) 571
BstV1I GCAGC 2 cut(s) 208, 514
BstX2I RGATCY 1 cut(s) 614
BstYI RGATCY 1 cut(s) 614
BsuI GTATCC 1 cut(s) 322
BtgI CCRYGG 1 cut(s) 610
BtrI CACGTC 1 cut(s) 136
Cfr13I GGNCC 1 cut(s) 88
Cfr9I CCCGGG 1 cut(s) 524
Csp6I GTAC 1 cut(s) 29
CviAII CATG 3 cut(s) 316, 506, 611
CviQI GTAC 1 cut(s) 29
DdeI CTNAG 2 cut(s) 42, 489
DpnI GATC 4 cut(s) 78, 424, 455, 616
DpnII GATC 4 cut(s) 76, 422, 453, 614
DraI TTTAAA 1 cut(s) 226
Eam1104I CTCTTC 2 cut(s) 351, 663
EarI CTCTTC 2 cut(s) 351, 663
Eco130I CCWWGG 3 cut(s) 189, 610, 622
Eco24I GRGCYC 1 cut(s) 57
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 1 cut(s) 88
Eco72I CACGTG 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 524
EcoRII CCWGG 1 cut(s) 586
EcoT14I CCWWGG 3 cut(s) 189, 610, 622
EcoT38I GRGCYC 1 cut(s) 57
ErhI CCWWGG 3 cut(s) 189, 610, 622
FaeI CATG 3 cut(s) 319, 509, 614
FaiI YATR 6 cut(s) 317, 365, 507, 612, 647, 656
FatI CATG 3 cut(s) 315, 505, 610
Fnu4HI GCNGC 3 cut(s) 197, 200, 503
FriOI GRGCYC 1 cut(s) 57
Fsp4HI GCNGC 3 cut(s) 197, 200, 503
FspBI CTAG 3 cut(s) 278, 408, 497
GluI GCNGC 3 cut(s) 197, 200, 503
HapII CCGG 1 cut(s) 525
Hin1II CATG 3 cut(s) 319, 509, 614
HinfI GANTC 2 cut(s) 509, 662
HpaII CCGG 1 cut(s) 525
HphI GGTGA 1 cut(s) 308
Hpy166II GTNNAC 2 cut(s) 84, 631
Hpy188I TCNGA 4 cut(s) 240, 458, 492, 667
Hpy188III TCNNGA 1 cut(s) 278
Hpy8I GTNNAC 2 cut(s) 84, 631
Hpy99I CGWCG 1 cut(s) 108
HpyAV CCTTC 1 cut(s) 567
HpyCH4III ACNGT 1 cut(s) 28
HpyCH4IV ACGT 2 cut(s) 135, 150
HpyCH4V TGCA 3 cut(s) 186, 217, 451
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 183, 502, 583
HpyF3I CTNAG 2 cut(s) 42, 489
HpySE526I ACGT 2 cut(s) 135, 150
Hsp92II CATG 3 cut(s) 319, 509, 614
Kzo9I GATC 4 cut(s) 76, 422, 453, 614
LmnI GCTCC 3 cut(s) 193, 475, 582
Lsp1109I GCAGC 2 cut(s) 208, 514
LweI GCATC 1 cut(s) 483
MaeI CTAG 3 cut(s) 278, 408, 497
MaeII ACGT 2 cut(s) 135, 150
MaeIII GTNAC 3 cut(s) 131, 296, 556
MalI GATC 4 cut(s) 78, 424, 455, 616
MboI GATC 4 cut(s) 76, 422, 453, 614
MboII GAAGA 5 cut(s) 18, 86, 275, 338, 650
MflI RGATCY 1 cut(s) 614
MhlI GDGCHC 1 cut(s) 57
MluCI AATT 7 cut(s) 48, 108, 161, 218, 232, 241, 248
MlyI GAGTC 1 cut(s) 671
MnlI CCTC 6 cut(s) 8, 37, 60, 466, 534, 664
MroXI GAANNNNTTC 1 cut(s) 234
MseI TTAA 3 cut(s) 120, 225, 351
MslI CAYNNNNRTG 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 1 cut(s) 525
MspR9I CCNGG 3 cut(s) 525, 526, 588
MvaI CCWGG 1 cut(s) 588
MvnI CGCG 1 cut(s) 571
MwoI GCNNNNNNNGC 4 cut(s) 122, 183, 502, 583
NciI CCSGG 2 cut(s) 525, 526
NcoI CCATGG 1 cut(s) 610
NdeII GATC 4 cut(s) 76, 422, 453, 614
NlaIII CATG 3 cut(s) 319, 509, 614
NlaIV GGNNCC 4 cut(s) 90, 477, 578, 616
NmuCI GTSAC 3 cut(s) 131, 296, 556
PdmI GAANNNNTTC 1 cut(s) 234
PfeI GAWTC 1 cut(s) 509
PflMI CCANNNNNTGG 2 cut(s) 388, 587
PkrI GCNGC 3 cut(s) 198, 201, 504
PleI GAGTC 1 cut(s) 670
PmaCI CACGTG 1 cut(s) 151
PmlI CACGTG 1 cut(s) 151
PpsI GAGTC 1 cut(s) 670
Ppu21I YACGTR 1 cut(s) 151
Psp6I CCWGG 1 cut(s) 586
PspCI CACGTG 1 cut(s) 151
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 4 cut(s) 90, 477, 578, 616
PspPI GGNCC 1 cut(s) 88
PstI CTGCAG 1 cut(s) 453
PsuI RGATCY 1 cut(s) 614
RsaI GTAC 1 cut(s) 30
RsaNI GTAC 1 cut(s) 29
RseI CAYNNNNRTG 1 cut(s) 491
SaqAI TTAA 3 cut(s) 120, 225, 351
SatI GCNGC 3 cut(s) 197, 200, 503
Sau3AI GATC 4 cut(s) 76, 422, 453, 614
Sau96I GGNCC 1 cut(s) 88
SchI GAGTC 1 cut(s) 671
ScrFI CCNGG 3 cut(s) 525, 526, 588
SduI GDGCHC 1 cut(s) 57
SetI ASST 5 cut(s) 19, 138, 153, 211, 431
SfaNI GCATC 1 cut(s) 483
SfcI CTRYAG 1 cut(s) 449
SinI GGWCC 1 cut(s) 88
SmaI CCCGGG 1 cut(s) 526
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 7 cut(s) 48, 108, 161, 218, 232, 241, 248
SsiI CCGC 1 cut(s) 199
SspMI CTAG 3 cut(s) 278, 408, 497
StyD4I CCNGG 3 cut(s) 523, 524, 586
StyI CCWWGG 3 cut(s) 189, 610, 622
TaaI ACNGT 1 cut(s) 28
TaiI ACGT 2 cut(s) 138, 153
TasI AATT 7 cut(s) 48, 108, 161, 218, 232, 241, 248
TatI WGTACW 1 cut(s) 28
TauI GCSGC 1 cut(s) 202
TfiI GAWTC 1 cut(s) 509
Tru1I TTAA 3 cut(s) 120, 225, 351
Tru9I TTAA 3 cut(s) 120, 225, 351
TseFI GTSAC 3 cut(s) 131, 296, 556
TseI GCWGC 2 cut(s) 196, 502
Tsp45I GTSAC 3 cut(s) 131, 296, 556
TspDTI ATGAA 2 cut(s) 276, 332
TspGWI ACGGA 1 cut(s) 101
TspMI CCCGGG 1 cut(s) 524
Van91I CCANNNNNTGG 2 cut(s) 388, 587
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 4 cut(s) 108, 232, 241, 248
XbaI TCTAGA 1 cut(s) 277
XcmI CCANNNNNNNNNTGG 1 cut(s) 389
XmaI CCCGGG 1 cut(s) 524
XmnI GAANNNNTTC 1 cut(s) 234
XspI CTAG 3 cut(s) 278, 408, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.