FvH4_4g14287
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000291
Physical Location & Seq
Forward (+)
17878489 .. 17880495
2007 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14287.t1

Sequence Viewer

Length: 2007 bp
ATGACCACTAGGGCTTCTAGTGCTGTTAACAAAGAGGGTGGCGTTTCTGGTTTTGGCAGTACTAGCAGGGCAACTCGGGCAGCACCCGTGCAGCGACCTTTTAACCCTTATACAAGGCCTTTCCCAGGTACTTGTTATAGGTGTTTACAGCCTGGTCATAGATCCAACGAGTGTACTGCCCCTCCGAAGGTGGTTAAAGCAGTTCAGGCTTTAGTCGAGGCCTGCGAGGAAGACGAGGTGGAGGAAGGAGGCGATGACTATGAAGGGGCTGAATTTGCAGTGGAAGATTCTCCAGAAAAGGTGAACATTGTATTGCAGAGAATTTTGTTATCTCCCAGGAAGGAGGACGGTCAACGTAAGAACCTTTTCAGATCGCATTGTTCTGTCAACAACAAGGTGTGTAATTTGATTGTGGATAATGGGAGTTGCGAAAACTTTGTTGCTGAAAAGTTGGTAGAGTATTTGCAGTTGCCAACAGAGGCCCATGTGATGCCCTATTCTTTGGGTTGGGTGAAGAAAGGTCCTCAAGTGCGTGTAACCAGAACTTGCAAAGTGCCTGTTTCGATTGGTAAGCATTATAGGGATGAAGTAGTTTGTGATGTTCTGGACATGGATGCTTGTGATATTCTGTTTGGGCGCCCTTGGCAGTATGATGTTGATGTTACTTACAGGGGTCAGGATAATGTGATGTTGTTTATGTGGGGTGAATTTAAGATTGCTATGGCTCTTGTGGTGAACTTTGTCAAACCTGCAGAAAAGAAGAGGGAGAATTTTCTAATCTTGTCCAAGAATGAACGAGAGATAGAGGAAGACTTTAAGGAGTCAGAGTTGTGTTGTCCTGTGGTGATTAAGGGGTTGTTTAGTGCAGAAAAAGAACCTGTGGAGATCCTTGAAGAAGTACAACAGTTGCTTAAGGGATTTGAGGAGTTGATTTCTGATAAGCTACCAAATGAGTTACCACCCATGCGAGACATCCAACACCAGATTGATTTTATTCCAGGTGTCAGTTTACCGAATCTTCCCCATTACCGTATGAGTCCTAAGGAGAACGAAATCTTGAGGGAGCAGATTGAGGACTTGCTGAAGAAGGGGTTTATTCGTGAGAGCATGAGCCCTTGTGCAGTTCCAGTCCTTCTTGTTCCAAAGAAGGGCAACCAATGGTGGATGTGTGTGGACAGTAGAGCCATCAACAAAATAACTTTCAAGTATCGGTTCCCTATTCCTCATTTGGAAGATATGCTTGATGAGTTGGCAGGCTCTATGGTGTTTTCAAAATTAGATCTTCGCAGTGGCTACCATCAGATTCGAATTAAACCAGGAGATGAGTGGAAGACAGCGTTCAAGAGTAAAGATGGTCTTTTTGAGTGGATAGTGATGCCTTTCGGATTATCTAATGCACCTAGCACCTTCATGAGAACCATGACACAAGTTCTTCGTCGTTTTCTGGGTGTTTTTGTGGTGGTCTATTTTGATGACATTCTGGTGTATACTGCTGTTCCAAAACATGTGGTGGATTTAGTCAAGCTGCCACGGGGTCATGGTGTTAGTGTTGCTGCTGAAAATATGACCAAAGAAGTGCAAGAAGTTCGTGAGTCAGTTAGGGCTAAACTGGAAGCCACTAATGCAAAGAATAAGGCTGCCGCTGACAAGCATCGCCGGGTTAAGTTATTCAAGGAAGGTGATGATGTTATGGTGTTTTTGCGGAATGAGAGGTTTCCTGTTGGTACCTACAATAAGCTGCAACCCAAGAAGTATGGTCCTTTCAAGGTTCTACGGAAGATCAATGACAATGCTTATGTTGTTGCACTTCCCGATTCTATGTCCATTTCCAATACATTTAATTTGGCTGATATTTATGAATACCATGCGGATAAGGCTCTTTATCCTGTTGAGAACTCGGGGTCGAGTTCTTCGGAGGTGGAGGAGACTGATGTAGGACGGATGGCCGAAGAAATCGAGGAACAAATTGATCGTTGCAGGTTCAAACCCGGTTTGCTGCAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

669

Amino Acids

76.01

Weight (kDa)

6.07

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 380 - 506 1.1e-25 Reverse transcriptase (RNA-dependent DNA polymerase)
SH3_Tf2-1 PF24626 560 - 622 6.8e-18 Tf2-1-like, SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 757, 1968
Acc65I GGTACC 1 cut(s) 1724
AccB1I GGYRCC 2 cut(s) 636, 1724
AccI GTMKAC 1 cut(s) 1487
AciI CCGC 3 cut(s) 1641, 1702, 1868
AclWI GGATC 2 cut(s) 156, 880
AcoI YGGCCR 1 cut(s) 1944
AcsI RAATTY 4 cut(s) 272, 321, 707, 769
AcuI CTGAAG 1 cut(s) 1103
AcyI GRCGYC 1 cut(s) 637
AfaI GTAC 5 cut(s) 61, 130, 175, 900, 1726
AfiI CCNNNNNNNGG 3 cut(s) 125, 187, 1148
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 1 cut(s) 1504
AgsI TTSAA 7 cut(s) 893, 1204, 1272, 1342, 1672, 1765, 1984
AjnI CCWGG 5 cut(s) 124, 151, 335, 997, 1315
AluBI AGCT 3 cut(s) 943, 1525, 1738
AluI AGCT 3 cut(s) 943, 1525, 1738
Alw26I GTCTC 2 cut(s) 963, 1919
AlwI GGATC 2 cut(s) 156, 880
Ama87I CYCGRG 2 cut(s) 75, 1897
AoxI GGCC 4 cut(s) 116, 219, 480, 1944
ApeKI GCWGC 7 cut(s) 80, 91, 1525, 1553, 1637, 1738, 1996
ApoI RAATTY 4 cut(s) 272, 321, 707, 769
Asp700I GAANNNNTTC 1 cut(s) 365
Asp718I GGTACC 1 cut(s) 1724
AspLEI GCGC 1 cut(s) 639
AspS9I GGNCC 3 cut(s) 481, 521, 1757
AsuC2I CCSGG 2 cut(s) 1658, 1989
AsuHPI GGTGA 6 cut(s) 313, 523, 716, 745, 856, 1691
AsuII TTCGAA 1 cut(s) 1306
AvaI CYCGRG 2 cut(s) 75, 1897
AvaII GGWCC 2 cut(s) 521, 1757
AxyI CCTNAGG 1 cut(s) 1041
BanI GGYRCC 2 cut(s) 636, 1724
BanII GRGCYC 1 cut(s) 1115
BbsI GAAGAC 3 cut(s) 237, 816, 1337
BbvI GCAGC 7 cut(s) 92, 103, 1512, 1540, 1624, 1725, 1983
BccI CCATC 4 cut(s) 1193, 1305, 1346, 1936
BcgI CGANNNNNNTGC 4 cut(s) 158, 192, 1568, 1602
BciT130I CCWGG 5 cut(s) 126, 153, 337, 999, 1317
BcnI CCSGG 2 cut(s) 1658, 1989
BcoDI GTCTC 2 cut(s) 963, 1919
BfaI CTAG 4 cut(s) 9, 18, 63, 1401
BfmI CTRYAG 2 cut(s) 750, 1997
BfoI RGCGCY 1 cut(s) 640
BfrI CTTAAG 1 cut(s) 911
BfuAI ACCTGC 2 cut(s) 757, 1968
BglII AGATCT 1 cut(s) 1279
BisI GCNGC 8 cut(s) 81, 92, 1526, 1554, 1638, 1641, 1739, 1997
BlsI GCNGC 8 cut(s) 82, 93, 1527, 1555, 1639, 1642, 1740, 1998
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 7 cut(s) 126, 153, 337, 999, 1317, 1658, 1989
Bme18I GGWCC 2 cut(s) 521, 1757
BmeT110I CYCGRG 2 cut(s) 75, 1897
BmgT120I GGNCC 3 cut(s) 481, 521, 1757
BmiI GGNNCC 3 cut(s) 638, 1214, 1726
BmrFI CCNGG 7 cut(s) 126, 153, 337, 999, 1317, 1658, 1989
BmsI GCATC 4 cut(s) 480, 604, 1365, 1660
BpiI GAAGAC 3 cut(s) 237, 816, 1337
BpmI CTGGAG 1 cut(s) 276
Bpu14I TTCGAA 1 cut(s) 1306
BpuEI CTTGAG 2 cut(s) 510, 1078
BpuMI CCSGG 2 cut(s) 1658, 1989
BsaHI GRCGYC 1 cut(s) 637
BsaJI CCNNGG 4 cut(s) 124, 335, 641, 1529
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 812, 842
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 187, 1148
Bse1I ACTGG 2 cut(s) 1127, 1614
Bse21I CCTNAGG 1 cut(s) 1041
BseBI CCWGG 5 cut(s) 126, 153, 337, 999, 1317
BseDI CCNNGG 4 cut(s) 124, 335, 641, 1529
BseGI GGATG 5 cut(s) 589, 619, 972, 1170, 1947
BseLI CCNNNNNNNGG 3 cut(s) 125, 187, 1148
BseNI ACTGG 2 cut(s) 1127, 1614
BseRI GAGGAG 2 cut(s) 938, 1937
BseXI GCAGC 7 cut(s) 92, 103, 1512, 1540, 1624, 1725, 1983
BsgI GTGCAG 3 cut(s) 110, 885, 1140
BshFI GGCC 4 cut(s) 118, 221, 482, 1946
BshNI GGYRCC 2 cut(s) 636, 1724
BsiHKCI CYCGRG 2 cut(s) 75, 1897
BsiSI CCGG 2 cut(s) 1657, 1989
BslI CCNNNNNNNGG 3 cut(s) 125, 187, 1148
BsmAI GTCTC 2 cut(s) 963, 1919
BsnI GGCC 4 cut(s) 118, 221, 482, 1946
BsoBI CYCGRG 2 cut(s) 75, 1897
Bsp119I TTCGAA 1 cut(s) 1306
Bsp1286I GDGCHC 1 cut(s) 1115
Bsp143I GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
BspACI CCGC 3 cut(s) 1641, 1702, 1868
BspANI GGCC 4 cut(s) 118, 221, 482, 1946
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 3 cut(s) 638, 1214, 1726
BspMAI CTGCAG 2 cut(s) 754, 2001
BspMI ACCTGC 2 cut(s) 757, 1968
BspPI GGATC 2 cut(s) 156, 880
BspT104I TTCGAA 1 cut(s) 1306
BspT107I GGYRCC 2 cut(s) 636, 1724
BspTI CTTAAG 1 cut(s) 911
BsrI ACTGG 2 cut(s) 1127, 1614
BssECI CCNNGG 4 cut(s) 124, 335, 641, 1529
BssMI GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
BssNAI GTATAC 1 cut(s) 1488
BssNI GRCGYC 1 cut(s) 637
BssT1I CCWWGG 1 cut(s) 641
Bst1107I GTATAC 1 cut(s) 1488
Bst2UI CCWGG 5 cut(s) 126, 153, 337, 999, 1317
Bst4CI ACNGT 4 cut(s) 350, 906, 1031, 1178
Bst6I CTCTTC 1 cut(s) 755
BstACI GRCGYC 1 cut(s) 637
BstAFI CTTAAG 1 cut(s) 911
BstBI TTCGAA 1 cut(s) 1306
BstC8I GCNNGC 2 cut(s) 223, 1255
BstDEI CTNAG 1 cut(s) 1041
BstDSI CCRYGG 1 cut(s) 1529
BstENI CCTNNNNNAGG 1 cut(s) 123
BstF5I GGATG 5 cut(s) 589, 619, 972, 1170, 1947
BstH2I RGCGCY 1 cut(s) 640
BstHHI GCGC 1 cut(s) 639
BstKTI GATC 6 cut(s) 164, 374, 888, 1282, 1782, 1972
BstMAI GTCTC 2 cut(s) 963, 1919
BstMBI GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
BstMWI GCNNNNNNNGC 8 cut(s) 20, 63, 77, 206, 275, 643, 1622, 1874
BstNI CCWGG 5 cut(s) 126, 153, 337, 999, 1317
BstNSI RCATGY 1 cut(s) 1508
BstSCI CCNGG 7 cut(s) 124, 151, 335, 997, 1315, 1656, 1987
BstSFI CTRYAG 2 cut(s) 750, 1997
BstV1I GCAGC 7 cut(s) 92, 103, 1512, 1540, 1624, 1725, 1983
BstV2I GAAGAC 3 cut(s) 237, 816, 1337
BstX2I RGATCY 3 cut(s) 161, 885, 1279
BstYI RGATCY 3 cut(s) 161, 885, 1279
BstZ17I GTATAC 1 cut(s) 1488
Bsu36I CCTNAGG 1 cut(s) 1041
BsuRI GGCC 4 cut(s) 118, 221, 482, 1946
BtgI CCRYGG 1 cut(s) 1529
BtgZI GCGATG 2 cut(s) 267, 1637
BtsCI GGATG 5 cut(s) 589, 619, 972, 1170, 1947
BtsI GCAGTG 2 cut(s) 285, 1294
BtsIMutI CAGTG 2 cut(s) 285, 1294
BveI ACCTGC 2 cut(s) 757, 1968
Cac8I GCNNGC 2 cut(s) 223, 1255
CciI TCATGA 1 cut(s) 1410
CfoI GCGC 1 cut(s) 639
Cfr13I GGNCC 3 cut(s) 481, 521, 1757
Csp6I GTAC 5 cut(s) 60, 129, 174, 899, 1725
CspCI CAANNNNNGTGG 4 cut(s) 19, 54, 1488, 1523
CviAII CATG 9 cut(s) 485, 610, 964, 1108, 1411, 1420, 1505, 1538, 1865
CviQI GTAC 5 cut(s) 60, 129, 174, 899, 1725
DdeI CTNAG 1 cut(s) 1041
DinI GGCGCC 1 cut(s) 638
DpnI GATC 6 cut(s) 163, 373, 887, 1281, 1781, 1971
DpnII GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
EaeI YGGCCR 1 cut(s) 1944
Eam1104I CTCTTC 1 cut(s) 755
EarI CTCTTC 1 cut(s) 755
Eco130I CCWWGG 1 cut(s) 641
Eco147I AGGCCT 2 cut(s) 118, 221
Eco24I GRGCYC 1 cut(s) 1115
Eco47I GGWCC 2 cut(s) 521, 1757
Eco57I CTGAAG 1 cut(s) 1103
Eco81I CCTNAGG 1 cut(s) 1041
Eco88I CYCGRG 2 cut(s) 75, 1897
EcoNI CCTNNNNNAGG 1 cut(s) 123
EcoO109I RGGNCCY 1 cut(s) 521
EcoRII CCWGG 5 cut(s) 124, 151, 335, 997, 1315
EcoT14I CCWWGG 1 cut(s) 641
EcoT38I GRGCYC 1 cut(s) 1115
EgeI GGCGCC 1 cut(s) 638
EheI GGCGCC 1 cut(s) 638
ErhI CCWWGG 1 cut(s) 641
FaeI CATG 9 cut(s) 488, 613, 967, 1111, 1414, 1423, 1508, 1541, 1868
FalI AAGNNNNNCTT 4 cut(s) 1224, 1256, 1341, 1373
FatI CATG 9 cut(s) 484, 609, 963, 1107, 1410, 1419, 1504, 1537, 1864
FblI GTMKAC 1 cut(s) 1487
Fnu4HI GCNGC 8 cut(s) 81, 92, 1526, 1554, 1638, 1641, 1739, 1997
FokI GGATG 5 cut(s) 596, 626, 959, 1177, 1954
FriOI GRGCYC 1 cut(s) 1115
Fsp4HI GCNGC 8 cut(s) 81, 92, 1526, 1554, 1638, 1641, 1739, 1997
FspBI CTAG 4 cut(s) 9, 18, 63, 1401
GlaI GCGC 1 cut(s) 638
GluI GCNGC 8 cut(s) 81, 92, 1526, 1554, 1638, 1641, 1739, 1997
GsuI CTGGAG 1 cut(s) 276
HaeII RGCGCY 1 cut(s) 640
HaeIII GGCC 4 cut(s) 118, 221, 482, 1946
HapII CCGG 2 cut(s) 1657, 1989
HhaI GCGC 1 cut(s) 639
Hin1I GRCGYC 1 cut(s) 637
Hin1II CATG 9 cut(s) 488, 613, 967, 1111, 1414, 1423, 1508, 1541, 1868
Hin6I GCGC 1 cut(s) 637
HinP1I GCGC 1 cut(s) 637
HincII GTYRAC 3 cut(s) 28, 353, 388
HindII GTYRAC 3 cut(s) 28, 353, 388
HinfI GANTC 7 cut(s) 287, 821, 1015, 1036, 1303, 1592, 1814
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 2 cut(s) 1657, 1989
HphI GGTGA 6 cut(s) 313, 523, 716, 745, 856, 1691
Hpy188I TCNGA 7 cut(s) 186, 371, 826, 937, 1302, 1385, 1915
Hpy188III TCNNGA 9 cut(s) 293, 605, 677, 1057, 1100, 1342, 1411, 1589, 1811
Hpy99I CGWCG 1 cut(s) 1440
HpyAV CCTTC 9 cut(s) 181, 239, 257, 334, 1081, 1141, 1142, 1417, 1670
HpyCH4III ACNGT 4 cut(s) 350, 906, 1031, 1178
HpyCH4IV ACGT 1 cut(s) 355
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 63, 77, 206, 275, 643, 1622, 1874
HpyF3I CTNAG 1 cut(s) 1041
HpySE526I ACGT 1 cut(s) 355
Hsp92I GRCGYC 1 cut(s) 637
Hsp92II CATG 9 cut(s) 488, 613, 967, 1111, 1414, 1423, 1508, 1541, 1868
HspAI GCGC 1 cut(s) 637
KasI GGCGCC 1 cut(s) 636
KpnI GGTACC 1 cut(s) 1728
KspAI GTTAAC 1 cut(s) 28
Kzo9I GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
LmnI GCTCC 1 cut(s) 1063
Lsp1109I GCAGC 7 cut(s) 92, 103, 1512, 1540, 1624, 1725, 1983
LweI GCATC 4 cut(s) 480, 604, 1365, 1660
MaeI CTAG 4 cut(s) 9, 18, 63, 1401
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 3 cut(s) 535, 661, 954
MalI GATC 6 cut(s) 163, 373, 887, 1281, 1781, 1971
MboI GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
MflI RGATCY 3 cut(s) 161, 885, 1279
MhlI GDGCHC 1 cut(s) 1115
MluCI AATT 9 cut(s) 272, 321, 403, 707, 769, 1274, 1308, 1840, 1965
Mly113I GGCGCC 1 cut(s) 637
MlyI GAGTC 3 cut(s) 830, 1045, 1601
MmeI TCCRAC 2 cut(s) 189, 1000
MroXI GAANNNNTTC 1 cut(s) 365
MslI CAYNNNNRTG 2 cut(s) 1409, 1481
MspA1I CMGCKG 1 cut(s) 1643
MspCI CTTAAG 1 cut(s) 911
MspI CCGG 2 cut(s) 1657, 1989
MspR9I CCNGG 7 cut(s) 126, 153, 337, 999, 1317, 1658, 1989
MvaI CCWGG 5 cut(s) 126, 153, 337, 999, 1317
MwoI GCNNNNNNNGC 8 cut(s) 20, 63, 77, 206, 275, 643, 1622, 1874
NarI GGCGCC 1 cut(s) 637
NciI CCSGG 2 cut(s) 1658, 1989
NdeII GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
NlaIII CATG 9 cut(s) 488, 613, 967, 1111, 1414, 1423, 1508, 1541, 1868
NlaIV GGNNCC 3 cut(s) 638, 1214, 1726
NspI RCATGY 1 cut(s) 1508
NspV TTCGAA 1 cut(s) 1306
PagI TCATGA 1 cut(s) 1410
PceI AGGCCT 2 cut(s) 118, 221
PciI ACATGT 1 cut(s) 1504
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdmI GAANNNNTTC 1 cut(s) 365
PfeI GAWTC 4 cut(s) 287, 1015, 1303, 1814
PkrI GCNGC 8 cut(s) 82, 93, 1527, 1555, 1639, 1642, 1740, 1998
PleI GAGTC 3 cut(s) 829, 1044, 1600
PluTI GGCGCC 1 cut(s) 640
PpsI GAGTC 3 cut(s) 829, 1044, 1600
PpuMI RGGWCCY 1 cut(s) 521
PscI ACATGT 1 cut(s) 1504
Psp5II RGGWCCY 1 cut(s) 521
Psp6I CCWGG 5 cut(s) 124, 151, 335, 997, 1315
PspGI CCWGG 5 cut(s) 124, 151, 335, 997, 1315
PspN4I GGNNCC 3 cut(s) 638, 1214, 1726
PspPI GGNCC 3 cut(s) 481, 521, 1757
PspPPI RGGWCCY 1 cut(s) 521
PstI CTGCAG 2 cut(s) 754, 2001
PsuI RGATCY 3 cut(s) 161, 885, 1279
RsaI GTAC 5 cut(s) 61, 130, 175, 900, 1726
RsaNI GTAC 5 cut(s) 60, 129, 174, 899, 1725
RseI CAYNNNNRTG 2 cut(s) 1409, 1481
SatI GCNGC 8 cut(s) 81, 92, 1526, 1554, 1638, 1641, 1739, 1997
Sau3AI GATC 6 cut(s) 161, 371, 885, 1279, 1779, 1969
Sau96I GGNCC 3 cut(s) 481, 521, 1757
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 3 cut(s) 830, 1045, 1601
ScrFI CCNGG 7 cut(s) 126, 153, 337, 999, 1317, 1658, 1989
SduI GDGCHC 1 cut(s) 1115
SfaNI GCATC 4 cut(s) 480, 604, 1365, 1660
SfcI CTRYAG 2 cut(s) 750, 1997
SfoI GGCGCC 1 cut(s) 638
SfuI TTCGAA 1 cut(s) 1306
SinI GGWCC 2 cut(s) 521, 1757
SmiMI CAYNNNNRTG 2 cut(s) 1409, 1481
SmlI CTYRAG 3 cut(s) 525, 911, 1057
SmoI CTYRAG 3 cut(s) 525, 911, 1057
Sse9I AATT 9 cut(s) 272, 321, 403, 707, 769, 1274, 1308, 1840, 1965
SseBI AGGCCT 2 cut(s) 118, 221
SsiI CCGC 3 cut(s) 1641, 1702, 1868
SspDI GGCGCC 1 cut(s) 636
SspMI CTAG 4 cut(s) 9, 18, 63, 1401
StuI AGGCCT 2 cut(s) 118, 221
StyD4I CCNGG 7 cut(s) 124, 151, 335, 997, 1315, 1656, 1987
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 4 cut(s) 350, 906, 1031, 1178
TaiI ACGT 1 cut(s) 358
TaqI TCGA 5 cut(s) 216, 563, 1306, 1904, 1956
TasI AATT 9 cut(s) 272, 321, 403, 707, 769, 1274, 1308, 1840, 1965
TatI WGTACW 3 cut(s) 59, 173, 898
TauI GCSGC 1 cut(s) 1643
TfiI GAWTC 4 cut(s) 287, 1015, 1303, 1814
TscAI CASTG 2 cut(s) 285, 1294
TseI GCWGC 7 cut(s) 80, 91, 1525, 1553, 1637, 1738, 1996
TspDTI ATGAA 5 cut(s) 276, 600, 807, 1399, 1872
TspGWI ACGGA 2 cut(s) 1789, 1954
TspRI CASTG 2 cut(s) 285, 1294
Vha464I CTTAAG 1 cut(s) 911
VpaK11BI GGWCC 2 cut(s) 521, 1757
XagI CCTNNNNNAGG 1 cut(s) 123
XapI RAATTY 4 cut(s) 272, 321, 707, 769
XceI RCATGY 1 cut(s) 1508
XcmI CCANNNNNNNNNTGG 1 cut(s) 1323
XmiI GTMKAC 1 cut(s) 1487
XmnI GAANNNNTTC 1 cut(s) 365
XspI CTAG 4 cut(s) 9, 18, 63, 1401
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.