Rw4G033140
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000291
Physical Location & Seq
Forward (+)
60243169 .. 60245598
2430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G033140.1

Sequence Viewer

Length: 2193 bp
ATGGGTGAGGTTACGAAATCAGATATTGAAGCTCTTACGGCAGCGTTTACCGCTGCCATCAATTCCATGAACAATCAGATTGGAGAAATTCGTGGATTGTTGGGTGAGAGGAACAACAACAACAACAACAATAACAACAATAATCGGCATAGAGGTGGGGAAGGAGGCCAGCGAGTTAGGGCTCCACGTGGTGAAGTTGTTGATAATACATCAGGATCTGAGCCTGAAGAAGAAATTTTACAACATGAACAACAGGGACAAGCTGACCAGGATTACAAAGTCAAGGCCGAAATTCCTTTCTTTTCGGGCAATTTGGGTGTAGAAGATTATTTGGATTGGCAGCTTCAGGTGGACAGATTCTTTGAGATTATGGAAGTGCCTGAACACAAGCAAGTTAAGCATGTTGCCTGGAGATTGAAGAGTACTGCTGCAGTATGGTGGGATAAGTTGCAGAACACTCGAAAGAAGCAGAGGAAGCAGGGTGTTAGAACATGGCGAAGAATGAAGCAGTTGATGATGGAGAGATTCTTGCCAGATGATTATGAGCAGATTCTATACAGGCTGTATATTGAATGTGTCCAGGGAACTAGGACGGTGGCTGATTATACAGCTGAGTTCTTACGCTACTCAGAGCGTAATGAATTAGGAGAAACTGAAGGCCAGAAGGTGGCTCGCTATATCAGTGGGCTGAAGCCTTCCATTCAGGAGAGAATTGGGTTACAAACTGTTCATACTATGGCCGAAGTTACAAACCTAGCATTGAAGGCAGAGTTGTTGGAGAAGCCTTCACGAGCTTCTTCTTTCCAGAGGTATAACTACCAAAGGAGCACAGATTTGCCTGGGCATAGATCTAATGTGTGTCCTGAGAGGAGACAAACTGCTCTTATAGGTGAATATGATGAAGATGAAGAAGAAGGAAGAGGTGACGATTATGATGGGGCTGAGTTTGCGGAGGAGGAGTCTCCTGAAAAGGTTAATATTGTGTTGCAGCGGGTCTTATTATGTCCTAAAGAAGATGGGCAGCGACGCAATATTTTCAGGTCATTTTGTTCCATCAATAACAAAGTGTGTAATTTGATTGTGGATAATGGGAGTTGCGAAAACTTTGTAGCCAAGAAACTGGTGGAATACTTGCAGTTACCTACGCAGCCTCATGAAGCACCTTATTCCCTTGGTTGGGTCAAGAAAGGTCCACAACATTATAAAGACGAAGTTCTGTGTGATATTATTGATATGGATGCTTGTCATATTTTATTTGGACGACCTTGGCAATATGATGTGGATGTGATTTATAAAGGCAGAGATAATGTGATGATGTTTATGTGGAATAGTCATAAAATTGCTATGGCTCCTGTGTGTCAATTTGAGAAATCTGGTGGAAAGAAAGGGGAGAGTTTTCTGACCTTGTGTAGTAGTGAATTTGAGATGGAGGAGTCCTTTAAAGAATCTGAAGTTTTCTGCCCAGTGGTGATAAAGGGGTTGTTGGCTGTGGAAAAGGAGGATGTGGTGATCCCTAAGGAAGTGCAGGATATGTTGGGAGAGTTTGAAGAGTTGATTTCAGATGAGTTGCCCAACAAACTACCACCTATGAGGGACATTCAACATCAGATTGATTTGGTTCCTGGAGCTAGTTTGCCAAATCTGCCACATTACCGAATGAGTCCCAAGGAGAATGAGATTTTGAGGGAGCAGATTGAAGATTTGTTAAAAAAAGGGTTCATTCGTGAAAGCATGAGTCCTTGTGCAGTTCCAGTCCTCCTTGTGCCTAAGAAGGGCAATCAATGGCGGATGTGTGTTGATAGCAGGGCCATAAATAAAATAACTGTGAAGTACAGGTTTCCCATTCCTCGTTTGGAGGACATGCTTGATGAACTGGAGGGTTCCAAAGTATTTACCAAGATAGACCTTCGAAGTGGTTACCACCAGATTCGAATCAAGCCAGGAGATGAGTGGAAGACAGCTTTTAAGAGCAAGGATGGCTTGTTCGAGTGGATGGTTATGCCATTCGGGTTGTCTAATGCACCCAGCACTTTTATGAGGCTTATGAACCAGGTTCTTCGTCCTTTTATTGGTTCCTTTGTCGTGGTGTATTTTGATGATATATTGATCTATAGCAGGACCAAAGAAGAACATCTGGTACATTTGAGACAGGTTCTGGGGCTTTACAGGAAAATAAACTGTACGTTAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

730

Amino Acids

84.38

Weight (kDa)

5.72

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 122 - 260 1.9e-07 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 134 - 232 2.8e-13 Retrotransposon gag protein
RVT_1 PF00078 588 - 728 4.3e-34 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1203, 1293
AccB7I CCANNNNNTGG 1 cut(s) 667
AciI CCGC 4 cut(s) 51, 950, 991, 1786
AclWI GGATC 2 cut(s) 223, 1504
AcoI YGGCCR 1 cut(s) 738
AcsI RAATTY 4 cut(s) 87, 234, 291, 1418
AcuI CTGAAG 5 cut(s) 246, 329, 675, 710, 1470
AcvI CACGTG 1 cut(s) 188
AdeI CACNNNGTG 1 cut(s) 191
AfaI GTAC 4 cut(s) 424, 1832, 2139, 2182
AfiI CCNNNNNNNGG 5 cut(s) 667, 1176, 1177, 1772, 2069
AgsI TTSAA 7 cut(s) 29, 418, 572, 763, 1547, 1601, 1697
AjnI CCWGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
AloI GAACNNNNNNTCC 2 cut(s) 1967, 1999
AluBI AGCT 7 cut(s) 32, 263, 343, 611, 794, 1628, 1961
AluI AGCT 7 cut(s) 32, 263, 343, 611, 794, 1628, 1961
Alw21I GWGCWC 1 cut(s) 830
Alw26I GTCTC 3 cut(s) 865, 966, 2140
AlwI GGATC 2 cut(s) 223, 1504
AlwNI CAGNNNCTG 2 cut(s) 218, 2155
AoxI GGCC 5 cut(s) 166, 285, 658, 738, 1806
ApeKI GCWGC 7 cut(s) 41, 53, 340, 428, 988, 1021, 1147
ApoI RAATTY 4 cut(s) 87, 234, 291, 1418
ArsI GACNNNNNNTTYG 2 cut(s) 344, 376
AspS9I GGNCC 3 cut(s) 1190, 1806, 2118
AsuHPI GGTGA 7 cut(s) 17, 116, 203, 902, 935, 1480, 1519
AsuII TTCGAA 2 cut(s) 1909, 1930
AvaII GGWCC 2 cut(s) 1190, 2118
AxyI CCTNAGG 1 cut(s) 1515
BanII GRGCYC 1 cut(s) 184
BarI GAAGNNNNNNTAC 2 cut(s) 222, 254
BauI CACGAG 1 cut(s) 789
BbrPI CACGTG 1 cut(s) 188
BbsI GAAGAC 1 cut(s) 1961
Bbv12I GWGCWC 1 cut(s) 830
BbvI GCAGC 7 cut(s) 40, 53, 352, 415, 1000, 1033, 1159
BccI CCATC 8 cut(s) 65, 511, 929, 1010, 1061, 1420, 1970, 1987
BceAI ACGGC 1 cut(s) 54
BcgI CGANNNNNNTGC 2 cut(s) 440, 474
BciT130I CCWGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
BcoDI GTCTC 3 cut(s) 865, 966, 2140
BfaI CTAG 3 cut(s) 588, 755, 1629
BfmI CTRYAG 2 cut(s) 429, 2110
BglII AGATCT 1 cut(s) 848
BisI GCNGC 7 cut(s) 42, 54, 341, 429, 989, 1022, 1148
BlsI GCNGC 7 cut(s) 43, 55, 342, 430, 990, 1023, 1149
BmcAI AGTACT 1 cut(s) 424
Bme1390I CCNGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
Bme18I GGWCC 2 cut(s) 1190, 2118
BmgT120I GGNCC 3 cut(s) 1190, 1806, 2118
BmiI GGNNCC 5 cut(s) 183, 1350, 1620, 1882, 2074
BmrFI CCNGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
BmrI ACTGGG 1 cut(s) 1457
BmsI GCATC 1 cut(s) 1228
BmuI ACTGGG 1 cut(s) 1457
BpiI GAAGAC 1 cut(s) 1961
BpmI CTGGAG 3 cut(s) 430, 1644, 1895
Bpu14I TTCGAA 2 cut(s) 1909, 1930
BsaAI YACGTR 1 cut(s) 188
BsaBI GATNNNNATC 1 cut(s) 1931
BsaJI CCNNGG 5 cut(s) 580, 839, 1171, 1265, 1665
BsaXI ACNNNNNCTCC 2 cut(s) 944, 974
Bsc4I CCNNNNNNNGG 5 cut(s) 667, 1176, 1177, 1772, 2069
Bse1I ACTGG 4 cut(s) 1125, 1463, 1751, 1878
Bse21I CCTNAGG 1 cut(s) 1515
Bse8I GATNNNNATC 1 cut(s) 1931
BseBI CCWGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
BseDI CCNNGG 5 cut(s) 580, 839, 1171, 1265, 1665
BseGI GGATG 6 cut(s) 1243, 1288, 1507, 1794, 1981, 1998
BseJI GATNNNNATC 1 cut(s) 1931
BseLI CCNNNNNNNGG 5 cut(s) 667, 1176, 1177, 1772, 2069
BseMII CTCAG 5 cut(s) 210, 603, 642, 855, 933
BseNI ACTGG 4 cut(s) 1125, 1463, 1751, 1878
BseRI GAGGAG 4 cut(s) 883, 968, 971, 1445
BseXI GCAGC 7 cut(s) 40, 53, 352, 415, 1000, 1033, 1159
BseYI CCCAGC 1 cut(s) 2024
BsgI GTGCAG 2 cut(s) 1544, 1764
BshFI GGCC 5 cut(s) 168, 287, 660, 740, 1808
BsiHKAI GWGCWC 1 cut(s) 830
BslFI GGGAC 3 cut(s) 270, 1607, 1647
BslI CCNNNNNNNGG 5 cut(s) 667, 1176, 1177, 1772, 2069
BsmAI GTCTC 3 cut(s) 865, 966, 2140
BsmFI GGGAC 3 cut(s) 270, 1607, 1647
BsnI GGCC 5 cut(s) 168, 287, 660, 740, 1808
Bsp119I TTCGAA 2 cut(s) 1909, 1930
Bsp1286I GDGCHC 2 cut(s) 184, 830
Bsp143I GATC 4 cut(s) 215, 848, 1509, 2106
BspACI CCGC 4 cut(s) 51, 950, 991, 1786
BspANI GGCC 5 cut(s) 168, 287, 660, 740, 1808
BspCNI CTCAG 5 cut(s) 211, 604, 641, 856, 934
BspHI TCATGA 1 cut(s) 1153
BspLI GGNNCC 5 cut(s) 183, 1350, 1620, 1882, 2074
BspMAI CTGCAG 1 cut(s) 433
BspPI GGATC 2 cut(s) 223, 1504
BspT104I TTCGAA 2 cut(s) 1909, 1930
BsrI ACTGG 4 cut(s) 1125, 1463, 1751, 1878
BssECI CCNNGG 5 cut(s) 580, 839, 1171, 1265, 1665
BssMI GATC 4 cut(s) 215, 848, 1509, 2106
BssSI CACGAG 1 cut(s) 789
BssT1I CCWWGG 3 cut(s) 1171, 1265, 1665
Bst2BI CACGAG 1 cut(s) 789
Bst2UI CCWGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
Bst4CI ACNGT 4 cut(s) 595, 727, 1825, 2180
Bst6I CTCTTC 3 cut(s) 413, 913, 1542
BstBAI YACGTR 1 cut(s) 188
BstBI TTCGAA 2 cut(s) 1909, 1930
BstC8I GCNNGC 2 cut(s) 170, 673
BstDEI CTNAG 7 cut(s) 219, 612, 628, 864, 942, 1515, 1767
BstEII GGTNACC 1 cut(s) 1916
BstF5I GGATG 6 cut(s) 1243, 1288, 1507, 1794, 1981, 1998
BstKTI GATC 4 cut(s) 218, 851, 1512, 2109
BstMAI GTCTC 3 cut(s) 865, 966, 2140
BstMBI GATC 4 cut(s) 215, 848, 1509, 2106
BstMWI GCNNNNNNNGC 8 cut(s) 38, 50, 397, 475, 764, 947, 1642, 1977
BstNI CCWGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
BstNSI RCATGY 2 cut(s) 404, 1864
BstPI GGTNACC 1 cut(s) 1916
BstSCI CCNGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
BstSFI CTRYAG 2 cut(s) 429, 2110
BstV1I GCAGC 7 cut(s) 40, 53, 352, 415, 1000, 1033, 1159
BstV2I GAAGAC 1 cut(s) 1961
BstX2I RGATCY 2 cut(s) 215, 848
BstXI CCANNNNNNTGG 1 cut(s) 1120
BstYI RGATCY 2 cut(s) 215, 848
Bsu36I CCTNAGG 1 cut(s) 1515
BsuRI GGCC 5 cut(s) 168, 287, 660, 740, 1808
BtsCI GGATG 6 cut(s) 1243, 1288, 1507, 1794, 1981, 1998
BtsIMutI CAGTG 2 cut(s) 688, 1470
Cac8I GCNNGC 2 cut(s) 170, 673
CaiI CAGNNNCTG 2 cut(s) 218, 2155
CciI TCATGA 1 cut(s) 1153
Cfr13I GGNCC 3 cut(s) 1190, 1806, 2118
CseI GACGC 1 cut(s) 1035
CsiI ACCWGGT 1 cut(s) 2049
Csp6I GTAC 4 cut(s) 423, 1831, 2138, 2181
CviAII CATG 7 cut(s) 67, 245, 401, 492, 1154, 1732, 1861
CviQI GTAC 4 cut(s) 423, 1831, 2138, 2181
DdeI CTNAG 7 cut(s) 219, 612, 628, 864, 942, 1515, 1767
DpnI GATC 4 cut(s) 217, 850, 1511, 2108
DpnII GATC 4 cut(s) 215, 848, 1509, 2106
DraI TTTAAA 1 cut(s) 1441
DraIII CACNNNGTG 1 cut(s) 191
EaeI YGGCCR 1 cut(s) 738
Eam1104I CTCTTC 3 cut(s) 413, 913, 1542
EarI CTCTTC 3 cut(s) 413, 913, 1542
EciI GGCGGA 1 cut(s) 1801
Eco130I CCWWGG 3 cut(s) 1171, 1265, 1665
Eco24I GRGCYC 1 cut(s) 184
Eco47I GGWCC 2 cut(s) 1190, 2118
Eco57I CTGAAG 5 cut(s) 246, 329, 675, 710, 1470
Eco72I CACGTG 1 cut(s) 188
Eco81I CCTNAGG 1 cut(s) 1515
Eco91I GGTNACC 1 cut(s) 1916
EcoO65I GGTNACC 1 cut(s) 1916
EcoRII CCWGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
EcoT14I CCWWGG 3 cut(s) 1171, 1265, 1665
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 3 cut(s) 1171, 1265, 1665
FaeI CATG 7 cut(s) 70, 248, 404, 495, 1157, 1735, 1864
FalI AAGNNNNNCTT 2 cut(s) 1964, 1996
FaqI GGGAC 3 cut(s) 270, 1607, 1647
FatI CATG 7 cut(s) 66, 244, 400, 491, 1153, 1731, 1860
FauI CCCGC 1 cut(s) 984
Fnu4HI GCNGC 7 cut(s) 42, 54, 341, 429, 989, 1022, 1148
FokI GGATG 6 cut(s) 1250, 1295, 1514, 1801, 1988, 2005
FriOI GRGCYC 1 cut(s) 184
Fsp4HI GCNGC 7 cut(s) 42, 54, 341, 429, 989, 1022, 1148
FspBI CTAG 3 cut(s) 588, 755, 1629
GluI GCNGC 7 cut(s) 42, 54, 341, 429, 989, 1022, 1148
GsaI CCCAGC 1 cut(s) 2028
GsuI CTGGAG 3 cut(s) 430, 1644, 1895
HaeIII GGCC 5 cut(s) 168, 287, 660, 740, 1808
HgaI GACGC 1 cut(s) 1035
Hin1II CATG 7 cut(s) 70, 248, 404, 495, 1157, 1735, 1864
HincII GTYRAC 1 cut(s) 2187
HindII GTYRAC 1 cut(s) 2187
HpaI GTTAAC 1 cut(s) 2187
HphI GGTGA 7 cut(s) 17, 116, 203, 902, 935, 1480, 1519
Hpy166II GTNNAC 4 cut(s) 48, 352, 1193, 2187
Hpy188I TCNGA 8 cut(s) 22, 78, 220, 631, 1401, 1450, 1561, 1608
Hpy188III TCNNGA 9 cut(s) 213, 704, 789, 805, 863, 965, 1154, 1183, 1724
Hpy8I GTNNAC 4 cut(s) 48, 352, 1193, 2187
Hpy99I CGWCG 1 cut(s) 1029
HpyAV CCTTC 9 cut(s) 155, 650, 658, 705, 757, 795, 908, 1765, 1916
HpyCH4III ACNGT 4 cut(s) 595, 727, 1825, 2180
HpyCH4IV ACGT 2 cut(s) 187, 2183
HpyCH4V TGCA 7 cut(s) 431, 451, 988, 1135, 1525, 1745, 2021
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 50, 397, 475, 764, 947, 1642, 1977
HpyF3I CTNAG 7 cut(s) 219, 612, 628, 864, 942, 1515, 1767
HpySE526I ACGT 2 cut(s) 187, 2183
Hsp92II CATG 7 cut(s) 70, 248, 404, 495, 1157, 1735, 1864
KspAI GTTAAC 1 cut(s) 2187
Kzo9I GATC 4 cut(s) 215, 848, 1509, 2106
LmnI GCTCC 5 cut(s) 187, 825, 1354, 1625, 1687
Lsp1109I GCAGC 7 cut(s) 40, 53, 352, 415, 1000, 1033, 1159
LweI GCATC 1 cut(s) 1228
MabI ACCWGGT 1 cut(s) 2049
MaeI CTAG 3 cut(s) 588, 755, 1629
MaeII ACGT 2 cut(s) 187, 2183
MaeIII GTNAC 6 cut(s) 10, 717, 745, 923, 1137, 1916
MalI GATC 4 cut(s) 217, 850, 1511, 2108
MboI GATC 4 cut(s) 215, 848, 1509, 2106
MflI RGATCY 2 cut(s) 215, 848
MhlI GDGCHC 2 cut(s) 184, 830
MlyI GAGTC 4 cut(s) 968, 1442, 1669, 1744
MmeI TCCRAC 1 cut(s) 756
MseI TTAA 6 cut(s) 396, 975, 1440, 1706, 1965, 2186
MslI CAYNNNNRTG 2 cut(s) 153, 2033
MspA1I CMGCKG 3 cut(s) 53, 611, 991
MspR9I CCNGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
MvaI CCWGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
MwoI GCNNNNNNNGC 8 cut(s) 38, 50, 397, 475, 764, 947, 1642, 1977
NdeII GATC 4 cut(s) 215, 848, 1509, 2106
NlaIII CATG 7 cut(s) 70, 248, 404, 495, 1157, 1735, 1864
NlaIV GGNNCC 5 cut(s) 183, 1350, 1620, 1882, 2074
NmuCI GTSAC 1 cut(s) 923
NspI RCATGY 2 cut(s) 404, 1864
NspV TTCGAA 2 cut(s) 1909, 1930
PagI TCATGA 1 cut(s) 1153
PfeI GAWTC 6 cut(s) 357, 525, 550, 1445, 1927, 1932
PflMI CCANNNNNTGG 1 cut(s) 667
PfoI TCCNGGA 1 cut(s) 1621
PkrI GCNGC 7 cut(s) 43, 55, 342, 430, 990, 1023, 1149
PleI GAGTC 4 cut(s) 967, 1441, 1668, 1743
PmaCI CACGTG 1 cut(s) 188
PmlI CACGTG 1 cut(s) 188
PpsI GAGTC 4 cut(s) 967, 1441, 1668, 1743
Ppu21I YACGTR 1 cut(s) 188
PsiI TTATAA 2 cut(s) 1203, 1293
Psp6I CCWGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
PspCI CACGTG 1 cut(s) 188
PspEI GGTNACC 1 cut(s) 1916
PspFI CCCAGC 1 cut(s) 2024
PspGI CCWGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
PspN4I GGNNCC 5 cut(s) 183, 1350, 1620, 1882, 2074
PspPI GGNCC 3 cut(s) 1190, 1806, 2118
PsrI GAACNNNNNNTAC 2 cut(s) 2121, 2153
PstI CTGCAG 1 cut(s) 433
PstNI CAGNNNCTG 2 cut(s) 218, 2155
PsuI RGATCY 2 cut(s) 215, 848
PvuII CAGCTG 1 cut(s) 611
RsaI GTAC 4 cut(s) 424, 1832, 2139, 2182
RsaNI GTAC 4 cut(s) 423, 1831, 2138, 2181
RseI CAYNNNNRTG 2 cut(s) 153, 2033
SaqAI TTAA 6 cut(s) 396, 975, 1440, 1706, 1965, 2186
SatI GCNGC 7 cut(s) 42, 54, 341, 429, 989, 1022, 1148
Sau3AI GATC 4 cut(s) 215, 848, 1509, 2106
Sau96I GGNCC 3 cut(s) 1190, 1806, 2118
ScaI AGTACT 1 cut(s) 424
SchI GAGTC 4 cut(s) 968, 1442, 1669, 1744
ScrFI CCNGG 7 cut(s) 269, 409, 581, 840, 1623, 1941, 2051
SduI GDGCHC 2 cut(s) 184, 830
SexAI ACCWGGT 1 cut(s) 2049
SfaNI GCATC 1 cut(s) 1228
SfcI CTRYAG 2 cut(s) 429, 2110
SfuI TTCGAA 2 cut(s) 1909, 1930
SinI GGWCC 2 cut(s) 1190, 2118
SmiMI CAYNNNNRTG 2 cut(s) 153, 2033
SsiI CCGC 4 cut(s) 51, 950, 991, 1786
SspI AATATT 2 cut(s) 979, 1033
SspMI CTAG 3 cut(s) 588, 755, 1629
StyD4I CCNGG 7 cut(s) 267, 407, 579, 838, 1621, 1939, 2049
StyI CCWWGG 3 cut(s) 1171, 1265, 1665
TaaI ACNGT 4 cut(s) 595, 727, 1825, 2180
TaiI ACGT 2 cut(s) 190, 2186
TaqI TCGA 4 cut(s) 460, 1909, 1930, 1986
TatI WGTACW 2 cut(s) 422, 1830
TfiI GAWTC 6 cut(s) 357, 525, 550, 1445, 1927, 1932
Tru1I TTAA 6 cut(s) 396, 975, 1440, 1706, 1965, 2186
Tru9I TTAA 6 cut(s) 396, 975, 1440, 1706, 1965, 2186
TscAI CASTG 2 cut(s) 688, 1470
TseFI GTSAC 1 cut(s) 923
TseI GCWGC 7 cut(s) 41, 53, 340, 428, 988, 1021, 1147
Tsp45I GTSAC 1 cut(s) 923
TspRI CASTG 2 cut(s) 688, 1470
Van91I CCANNNNNTGG 1 cut(s) 667
VpaK11BI GGWCC 2 cut(s) 1190, 2118
XapI RAATTY 4 cut(s) 87, 234, 291, 1418
XceI RCATGY 2 cut(s) 404, 1864
XcmI CCANNNNNNNNNTGG 3 cut(s) 1120, 1849, 1947
XspI CTAG 3 cut(s) 588, 755, 1629
ZrmI AGTACT 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.