transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Chromo | PF00385 | 8 - 61 | 4.5e-13 | Chromo (CHRromatin Organisation MOdifier) domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 199 |
| AatII | GACGTC | 2 cut(s) | 143, 203 |
| AccI | GTMKAC | 2 cut(s) | 191, 203 |
| AcyI | GRCGYC | 2 cut(s) | 140, 200 |
| AfaI | GTAC | 1 cut(s) | 86 |
| Alw26I | GTCTC | 1 cut(s) | 131 |
| AseI | ATTAAT | 1 cut(s) | 168 |
| AspS9I | GGNCC | 1 cut(s) | 160 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 131 |
| BmcAI | AGTACT | 1 cut(s) | 86 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmgT120I | GGNCC | 1 cut(s) | 160 |
| BmsI | GCATC | 1 cut(s) | 42 |
| BsaHI | GRCGYC | 2 cut(s) | 140, 200 |
| BsmAI | GTCTC | 1 cut(s) | 131 |
| BsmBI | CGTCTC | 1 cut(s) | 131 |
| BssNI | GRCGYC | 2 cut(s) | 140, 200 |
| BstACI | GRCGYC | 2 cut(s) | 140, 200 |
| BstMAI | GTCTC | 1 cut(s) | 131 |
| BstNSI | RCATGY | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 1 cut(s) | 160 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 60, 95 |
| CviAII | CATG | 2 cut(s) | 77, 126 |
| CviJI | RGCY | 3 cut(s) | 41, 106, 209 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 106, 209 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 199 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 199 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| EcoO109I | RGGNCCY | 1 cut(s) | 160 |
| Esp3I | CGTCTC | 1 cut(s) | 131 |
| FaeI | CATG | 2 cut(s) | 80, 129 |
| FaiI | YATR | 5 cut(s) | 78, 112, 127, 148, 156 |
| FatI | CATG | 2 cut(s) | 76, 125 |
| FblI | GTMKAC | 2 cut(s) | 191, 203 |
| Hin1I | GRCGYC | 2 cut(s) | 140, 200 |
| Hin1II | CATG | 2 cut(s) | 80, 129 |
| HincII | GTYRAC | 2 cut(s) | 192, 204 |
| HindII | GTYRAC | 2 cut(s) | 192, 204 |
| HinfI | GANTC | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 2 cut(s) | 192, 204 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 1 cut(s) | 178 |
| Hpy8I | GTNNAC | 2 cut(s) | 192, 204 |
| Hpy99I | CGWCG | 3 cut(s) | 196, 205, 208 |
| HpyCH4IV | ACGT | 2 cut(s) | 140, 200 |
| HpySE526I | ACGT | 2 cut(s) | 140, 200 |
| Hsp92I | GRCGYC | 2 cut(s) | 140, 200 |
| Hsp92II | CATG | 2 cut(s) | 80, 129 |
| LpnPI | CCDG | 1 cut(s) | 176 |
| LweI | GCATC | 1 cut(s) | 42 |
| MaeII | ACGT | 2 cut(s) | 140, 200 |
| MlyI | GAGTC | 1 cut(s) | 197 |
| MnlI | CCTC | 2 cut(s) | 174, 189 |
| MseI | TTAA | 2 cut(s) | 168, 211 |
| NlaIII | CATG | 2 cut(s) | 80, 129 |
| NspI | RCATGY | 1 cut(s) | 80 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 197, 200 |
| PleI | GAGTC | 1 cut(s) | 196 |
| PpsI | GAGTC | 1 cut(s) | 196 |
| PpuMI | RGGWCCY | 1 cut(s) | 160 |
| PshBI | ATTAAT | 1 cut(s) | 168 |
| Psp5II | RGGWCCY | 1 cut(s) | 160 |
| PspPI | GGNCC | 1 cut(s) | 160 |
| PspPPI | RGGWCCY | 1 cut(s) | 160 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| SalI | GTCGAC | 2 cut(s) | 190, 202 |
| SaqAI | TTAA | 2 cut(s) | 168, 211 |
| Sau96I | GGNCC | 1 cut(s) | 160 |
| ScaI | AGTACT | 1 cut(s) | 86 |
| SchI | GAGTC | 1 cut(s) | 197 |
| SetI | ASST | 3 cut(s) | 143, 165, 203 |
| SfaNI | GCATC | 1 cut(s) | 42 |
| SgrDI | CGTCGACG | 1 cut(s) | 202 |
| SinI | GGWCC | 1 cut(s) | 160 |
| TaiI | ACGT | 2 cut(s) | 143, 203 |
| TaqI | TCGA | 4 cut(s) | 36, 177, 191, 203 |
| TatI | WGTACW | 1 cut(s) | 84 |
| Tru1I | TTAA | 2 cut(s) | 168, 211 |
| Tru9I | TTAA | 2 cut(s) | 168, 211 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| VspI | ATTAAT | 1 cut(s) | 168 |
| XceI | RCATGY | 1 cut(s) | 80 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 49 |
| XmiI | GTMKAC | 2 cut(s) | 191, 203 |
| ZraI | GACGTC | 2 cut(s) | 141, 201 |
| ZrmI | AGTACT | 1 cut(s) | 86 |