Rw2G050340
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000291
Physical Location & Seq
Forward (+)
77984481 .. 77987143
2663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G050340.1

Sequence Viewer

Length: 1071 bp
ATGTTGTTTCAAAAGAAGCACGATGGAAGTTGGAGACTGTGTGTGGACTATCGGGCCCTCAACAAAGTCATGGTGCGCAACAAGTACCTGATCCCTCTGATTGCAGATCTGTTTGATCAACTCAGTGGTGCCAAGTATTTCACAAAGCTAGACCTCCGCTCGGGGTACTATCAAGAGTGGCGAAACCCCAAGAATGTGAAAGAGCTACGTTCTTTCCTTGGGTTGGCTAATTACTATCAACGCTTCATTGAGAATTACTCAAAGAAGACGACCCCCTTAACTGAACTCTTGAAGAAGGGGGTGACATGGGACTGGAGTAGTAATTGTGAGAAGGCCTTTCAAGATTTGAAGAAGGCCGTGATGGAAGATCTGGTCCTTGCCTTACCCGACCTGAATCAGCCATTTGAAGTCCAAACAGATGCTTCTGACTTCGCCTTAGGGGGAGTCCTGCTGCAACGGGGGCATCCTGTTGCGTATGAAAGTCATAAACTCTCGGAAGCTGAGAGGAGGTACGCGGCTCAGGAGAAGGAGTTGCTAGCCGTAGTTCACTGTTTGAGGACGTGGCGACACTATTTGTTGGGGGAGTTTCAAGCAGGGGACATGGTCCTTGTCAAGCTGTTCCCGGAACAACTCAGGTTCCTGCGCTCCAGAGACAAGCGACTATTCCGGAAGTATGAAGGACCACTCCCCATCCTTTCTAAAGTGGGGAAATGCTCCTACAAATTCGATAGCCCCACCTGGATGAGAGTTCACCCCGTCTTCCACGTCAGCAACCTCAAGCCACACCAGCCAGACCGTGAAGATCAAGCACGCAACAAGCCTGTTCGAGAGCACGTCGACATCAGACCACCCAAGCCAAAAGAAGTGGAGGAGATCCTAGCAGAGAGAGTGGTCCGAGTGTCAAGGCGCCCATGCCAGCAGTTCCTGGTCAAGTGGAAGGGTCTTGGAGATGAAGAAACCAGTTGGGAGAATGTTGAAGTCCTGAAGACGAAGTTCCAACAGAAGATTGAAGACTTCAAGACCACGGCTGTCGTCGAGAACGCCGACAGCTTAAGTGGGGGAGGATGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chromo RVT_1 Retrotrans_gag gag-asp_proteas

Protein Analysis

356

Amino Acids

41.62

Weight (kDa)

9.26

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 5 - 62 3.7e-07 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 105 - 194 1.4e-32 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 130 - 195 4.5e-22 RNase H-like domain found in reverse transcriptase
SH3_Tf2-1 PF24626 199 - 262 4e-14 Tf2-1-like, SH3 domain
Chromo PF00385 288 - 341 7.6e-12 Chromo (CHRromatin Organisation MOdifier) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 77
AccB1I GGYRCC 2 cut(s) 128, 906
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 1 cut(s) 837
AccII CGCG 1 cut(s) 515
AccIII TCCGGA 1 cut(s) 666
AciI CCGC 2 cut(s) 157, 515
AclWI GGATC 2 cut(s) 85, 868
AcsI RAATTY 1 cut(s) 722
AcuI CTGAAG 1 cut(s) 1004
AcyI GRCGYC 1 cut(s) 907
AfaI GTAC 3 cut(s) 86, 167, 512
AfiI CCNNNNNNNGG 2 cut(s) 160, 223
AflII CTTAAG 1 cut(s) 1051
AgsI TTSAA 9 cut(s) 11, 292, 341, 349, 407, 590, 977, 1010, 1018
AjiI CACGTC 3 cut(s) 561, 766, 835
AjnI CCWGG 2 cut(s) 737, 924
AluBI AGCT 5 cut(s) 148, 205, 500, 616, 1050
AluI AGCT 5 cut(s) 148, 205, 500, 616, 1050
Alw21I GWGCWC 1 cut(s) 834
Alw26I GTCTC 2 cut(s) 28, 645
AlwI GGATC 2 cut(s) 85, 868
AlwNI CAGNNNCTG 1 cut(s) 925
Ama87I CYCGRG 1 cut(s) 160
Aor13HI TCCGGA 1 cut(s) 666
AoxI GGCC 3 cut(s) 54, 333, 354
ApaI GGGCCC 1 cut(s) 58
ApeKI GCWGC 1 cut(s) 451
ApoI RAATTY 1 cut(s) 722
AspLEI GCGC 3 cut(s) 78, 645, 909
AspS9I GGNCC 6 cut(s) 54, 55, 373, 604, 680, 892
AsuC2I CCSGG 1 cut(s) 623
AsuHPI GGTGA 2 cut(s) 313, 743
AsuNHI GCTAGC 1 cut(s) 535
AvaI CYCGRG 1 cut(s) 160
AvaII GGWCC 4 cut(s) 373, 604, 680, 892
AxyI CCTNAGG 1 cut(s) 436
BaeGI GKGCMC 1 cut(s) 58
BanI GGYRCC 2 cut(s) 128, 906
BanII GRGCYC 1 cut(s) 58
BbsI GAAGAC 4 cut(s) 272, 751, 992, 1017
Bbv12I GWGCWC 1 cut(s) 834
BbvI GCAGC 1 cut(s) 438
BccI CCATC 3 cut(s) 17, 355, 698
BceAI ACGGC 3 cut(s) 341, 524, 1041
BciT130I CCWGG 2 cut(s) 739, 926
BclI TGATCA 1 cut(s) 115
BcnI CCSGG 1 cut(s) 623
BcoDI GTCTC 2 cut(s) 28, 645
BfaI CTAG 3 cut(s) 149, 536, 878
BfoI RGCGCY 1 cut(s) 910
BfrI CTTAAG 1 cut(s) 1051
BglII AGATCT 2 cut(s) 106, 367
BisI GCNGC 2 cut(s) 452, 516
BlsI GCNGC 2 cut(s) 453, 517
Bme1390I CCNGG 3 cut(s) 623, 739, 926
Bme18I GGWCC 4 cut(s) 373, 604, 680, 892
BmeT110I CYCGRG 1 cut(s) 160
BmgBI CACGTC 3 cut(s) 561, 766, 835
BmgT120I GGNCC 6 cut(s) 54, 55, 373, 604, 680, 892
BmiI GGNNCC 4 cut(s) 56, 130, 638, 908
BmrFI CCNGG 3 cut(s) 623, 739, 926
BmsI GCATC 2 cut(s) 409, 472
BmtI GCTAGC 1 cut(s) 539
BpiI GAAGAC 4 cut(s) 272, 751, 992, 1017
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 334, 631
Bpu10I CCTNAGC 1 cut(s) 519
BpuEI CTTGAG 1 cut(s) 761
BpuMI CCSGG 1 cut(s) 623
BsaHI GRCGYC 1 cut(s) 907
BsaJI CCNNGG 2 cut(s) 217, 1023
BsaWI WCCGGW 1 cut(s) 666
BsaXI ACNNNNNCTCC 4 cut(s) 25, 55, 515, 545
Bsc4I CCNNNNNNNGG 2 cut(s) 160, 223
Bse1I ACTGG 2 cut(s) 317, 960
Bse21I CCTNAGG 1 cut(s) 436
BseAI TCCGGA 1 cut(s) 666
BseBI CCWGG 2 cut(s) 739, 926
BseDI CCNNGG 2 cut(s) 217, 1023
BseGI GGATG 4 cut(s) 463, 690, 747, 1070
BseLI CCNNNNNNNGG 2 cut(s) 160, 223
BseMII CTCAG 4 cut(s) 136, 492, 533, 646
BseNI ACTGG 2 cut(s) 317, 960
BseRI GAGGAG 2 cut(s) 520, 884
BseSI GKGCMC 1 cut(s) 58
BseXI GCAGC 1 cut(s) 438
Bsh1236I CGCG 1 cut(s) 515
BshFI GGCC 3 cut(s) 56, 335, 356
BshNI GGYRCC 2 cut(s) 128, 906
BsiHKAI GWGCWC 1 cut(s) 834
BsiHKCI CYCGRG 1 cut(s) 160
BsiSI CCGG 2 cut(s) 623, 667
BslFI GGGAC 2 cut(s) 323, 611
BslI CCNNNNNNNGG 2 cut(s) 160, 223
BsmAI GTCTC 2 cut(s) 28, 645
BsmFI GGGAC 2 cut(s) 323, 611
BsnI GGCC 3 cut(s) 56, 335, 356
BsoBI CYCGRG 1 cut(s) 160
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 2 cut(s) 58, 834
Bsp13I TCCGGA 1 cut(s) 666
Bsp143I GATC 6 cut(s) 90, 106, 115, 367, 802, 873
BspACI CCGC 2 cut(s) 157, 515
BspANI GGCC 3 cut(s) 56, 335, 356
BspCNI CTCAG 4 cut(s) 135, 493, 532, 645
BspEI TCCGGA 1 cut(s) 666
BspFNI CGCG 1 cut(s) 515
BspLI GGNNCC 4 cut(s) 56, 130, 638, 908
BspOI GCTAGC 1 cut(s) 539
BspPI GGATC 2 cut(s) 85, 868
BspT107I GGYRCC 2 cut(s) 128, 906
BspTI CTTAAG 1 cut(s) 1051
BsrBI CCGCTC 1 cut(s) 159
BsrI ACTGG 2 cut(s) 317, 960
BssECI CCNNGG 2 cut(s) 217, 1023
BssMI GATC 6 cut(s) 90, 106, 115, 367, 802, 873
BssNI GRCGYC 1 cut(s) 907
BssT1I CCWWGG 1 cut(s) 217
Bst2UI CCWGG 2 cut(s) 739, 926
Bst4CI ACNGT 3 cut(s) 39, 551, 797
BstACI GRCGYC 1 cut(s) 907
BstAFI CTTAAG 1 cut(s) 1051
BstC8I GCNNGC 3 cut(s) 537, 811, 917
BstDEI CTNAG 5 cut(s) 122, 436, 501, 519, 632
BstDSI CCRYGG 1 cut(s) 1023
BstF5I GGATG 4 cut(s) 463, 690, 747, 1070
BstFNI CGCG 1 cut(s) 515
BstH2I RGCGCY 1 cut(s) 910
BstHHI GCGC 3 cut(s) 78, 645, 909
BstKTI GATC 6 cut(s) 93, 109, 118, 370, 805, 876
BstMAI GTCTC 2 cut(s) 28, 645
BstMBI GATC 6 cut(s) 90, 106, 115, 367, 802, 873
BstMWI GCNNNNNNNGC 2 cut(s) 460, 787
BstNI CCWGG 2 cut(s) 739, 926
BstSCI CCNGG 3 cut(s) 621, 737, 924
BstSLI GKGCMC 1 cut(s) 58
BstUI CGCG 1 cut(s) 515
BstV1I GCAGC 1 cut(s) 438
BstV2I GAAGAC 4 cut(s) 272, 751, 992, 1017
BstX2I RGATCY 3 cut(s) 106, 367, 873
BstYI RGATCY 3 cut(s) 106, 367, 873
Bsu36I CCTNAGG 1 cut(s) 436
BsuRI GGCC 3 cut(s) 56, 335, 356
BtgI CCRYGG 1 cut(s) 1023
BtrI CACGTC 3 cut(s) 561, 766, 835
BtsCI GGATG 4 cut(s) 463, 690, 747, 1070
BtsIMutI CAGTG 2 cut(s) 130, 547
Cac8I GCNNGC 3 cut(s) 537, 811, 917
CaiI CAGNNNCTG 1 cut(s) 925
CfoI GCGC 3 cut(s) 78, 645, 909
Cfr13I GGNCC 6 cut(s) 54, 55, 373, 604, 680, 892
Csp6I GTAC 3 cut(s) 85, 166, 511
CspCI CAANNNNNGTGG 2 cut(s) 846, 881
CviAII CATG 4 cut(s) 70, 306, 601, 912
CviQI GTAC 3 cut(s) 85, 166, 511
DdeI CTNAG 5 cut(s) 122, 436, 501, 519, 632
DinI GGCGCC 1 cut(s) 908
DpnI GATC 6 cut(s) 92, 108, 117, 369, 804, 875
DpnII GATC 6 cut(s) 90, 106, 115, 367, 802, 873
Eco130I CCWWGG 1 cut(s) 217
Eco147I AGGCCT 1 cut(s) 335
Eco24I GRGCYC 1 cut(s) 58
Eco47I GGWCC 4 cut(s) 373, 604, 680, 892
Eco57I CTGAAG 1 cut(s) 1004
Eco81I CCTNAGG 1 cut(s) 436
Eco88I CYCGRG 1 cut(s) 160
EcoO109I RGGNCCY 1 cut(s) 55
EcoRII CCWGG 2 cut(s) 737, 924
EcoT14I CCWWGG 1 cut(s) 217
EcoT38I GRGCYC 1 cut(s) 58
EgeI GGCGCC 1 cut(s) 908
EheI GGCGCC 1 cut(s) 908
ErhI CCWWGG 1 cut(s) 217
FaeI CATG 4 cut(s) 73, 309, 604, 915
FaiI YATR 7 cut(s) 71, 307, 477, 486, 602, 675, 913
FaqI GGGAC 2 cut(s) 323, 611
FatI CATG 4 cut(s) 69, 305, 600, 911
FbaI TGATCA 1 cut(s) 115
FblI GTMKAC 1 cut(s) 837
Fnu4HI GCNGC 2 cut(s) 452, 516
FokI GGATG 3 cut(s) 450, 677, 754
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 2 cut(s) 452, 516
FspBI CTAG 3 cut(s) 149, 536, 878
FspI TGCGCA 1 cut(s) 77
GlaI GCGC 3 cut(s) 77, 644, 908
GluI GCNGC 2 cut(s) 452, 516
GsuI CTGGAG 2 cut(s) 334, 631
HaeII RGCGCY 1 cut(s) 910
HaeIII GGCC 3 cut(s) 56, 335, 356
HapII CCGG 2 cut(s) 623, 667
HhaI GCGC 3 cut(s) 78, 645, 909
Hin1I GRCGYC 1 cut(s) 907
Hin1II CATG 4 cut(s) 73, 309, 604, 915
Hin6I GCGC 3 cut(s) 76, 643, 907
HinP1I GCGC 3 cut(s) 76, 643, 907
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HinfI GANTC 2 cut(s) 394, 444
HpaII CCGG 2 cut(s) 623, 667
HphI GGTGA 2 cut(s) 313, 743
Hpy166II GTNNAC 4 cut(s) 46, 547, 751, 838
Hpy188I TCNGA 5 cut(s) 99, 427, 496, 845, 896
Hpy8I GTNNAC 4 cut(s) 46, 547, 751, 838
Hpy99I CGWCG 2 cut(s) 839, 1037
HpyAV CCTTC 6 cut(s) 289, 325, 346, 520, 671, 931
HpyCH4III ACNGT 3 cut(s) 39, 551, 797
HpyCH4IV ACGT 4 cut(s) 208, 560, 765, 834
HpyCH4V TGCA 2 cut(s) 104, 454
HpyF10VI GCNNNNNNNGC 2 cut(s) 460, 787
HpyF3I CTNAG 5 cut(s) 122, 436, 501, 519, 632
HpySE526I ACGT 4 cut(s) 208, 560, 765, 834
Hsp92I GRCGYC 1 cut(s) 907
Hsp92II CATG 4 cut(s) 73, 309, 604, 915
HspAI GCGC 3 cut(s) 76, 643, 907
KasI GGCGCC 1 cut(s) 906
Kpn2I TCCGGA 1 cut(s) 666
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 6 cut(s) 90, 106, 115, 367, 802, 873
LmnI GCTCC 2 cut(s) 650, 719
Lsp1109I GCAGC 1 cut(s) 438
LweI GCATC 2 cut(s) 409, 472
MaeI CTAG 3 cut(s) 149, 536, 878
MaeII ACGT 4 cut(s) 208, 560, 765, 834
MaeIII GTNAC 1 cut(s) 301
MalI GATC 6 cut(s) 92, 108, 117, 369, 804, 875
MbiI CCGCTC 1 cut(s) 159
MboI GATC 6 cut(s) 90, 106, 115, 367, 802, 873
MflI RGATCY 3 cut(s) 106, 367, 873
MhlI GDGCHC 2 cut(s) 58, 834
MluCI AATT 4 cut(s) 229, 253, 322, 722
Mly113I GGCGCC 1 cut(s) 907
MlyI GAGTC 1 cut(s) 453
MmeI TCCRAC 2 cut(s) 11, 1021
MnlI CCTC 9 cut(s) 68, 105, 164, 498, 501, 549, 785, 862, 1055
MroI TCCGGA 1 cut(s) 666
MseI TTAA 2 cut(s) 278, 1052
MslI CAYNNNNRTG 1 cut(s) 740
MspCI CTTAAG 1 cut(s) 1051
MspI CCGG 2 cut(s) 623, 667
MspR9I CCNGG 3 cut(s) 623, 739, 926
MvaI CCWGG 2 cut(s) 739, 926
MvnI CGCG 1 cut(s) 515
MwoI GCNNNNNNNGC 2 cut(s) 460, 787
NarI GGCGCC 1 cut(s) 907
NciI CCSGG 1 cut(s) 623
NdeII GATC 6 cut(s) 90, 106, 115, 367, 802, 873
NheI GCTAGC 1 cut(s) 535
NlaIII CATG 4 cut(s) 73, 309, 604, 915
NlaIV GGNNCC 4 cut(s) 56, 130, 638, 908
NmuCI GTSAC 1 cut(s) 301
NsbI TGCGCA 1 cut(s) 77
PceI AGGCCT 1 cut(s) 335
PcsI WCGNNNNNNNCGW 1 cut(s) 1041
PfeI GAWTC 1 cut(s) 394
PflFI GACNNNGTC 1 cut(s) 602
PfoI TCCNGGA 1 cut(s) 621
PkrI GCNGC 2 cut(s) 453, 517
PleI GAGTC 1 cut(s) 452
PluTI GGCGCC 1 cut(s) 910
PpsI GAGTC 1 cut(s) 452
Psp6I CCWGG 2 cut(s) 737, 924
PspGI CCWGG 2 cut(s) 737, 924
PspN4I GGNNCC 4 cut(s) 56, 130, 638, 908
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 6 cut(s) 54, 55, 373, 604, 680, 892
PstNI CAGNNNCTG 1 cut(s) 925
PsuI RGATCY 3 cut(s) 106, 367, 873
PsyI GACNNNGTC 1 cut(s) 602
RsaI GTAC 3 cut(s) 86, 167, 512
RsaNI GTAC 3 cut(s) 85, 166, 511
RseI CAYNNNNRTG 1 cut(s) 740
SalI GTCGAC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 278, 1052
SatI GCNGC 2 cut(s) 452, 516
Sau3AI GATC 6 cut(s) 90, 106, 115, 367, 802, 873
Sau96I GGNCC 6 cut(s) 54, 55, 373, 604, 680, 892
SchI GAGTC 1 cut(s) 453
ScrFI CCNGG 3 cut(s) 623, 739, 926
SduI GDGCHC 2 cut(s) 58, 834
SfaNI GCATC 2 cut(s) 409, 472
SfoI GGCGCC 1 cut(s) 908
SinI GGWCC 4 cut(s) 373, 604, 680, 892
SmiMI CAYNNNNRTG 1 cut(s) 740
SmlI CTYRAG 2 cut(s) 776, 1051
SmoI CTYRAG 2 cut(s) 776, 1051
Sse9I AATT 4 cut(s) 229, 253, 322, 722
SseBI AGGCCT 1 cut(s) 335
SsiI CCGC 2 cut(s) 157, 515
SspDI GGCGCC 1 cut(s) 906
SspMI CTAG 3 cut(s) 149, 536, 878
StuI AGGCCT 1 cut(s) 335
StyD4I CCNGG 3 cut(s) 621, 737, 924
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 3 cut(s) 39, 551, 797
TaiI ACGT 4 cut(s) 211, 563, 768, 837
TaqI TCGA 4 cut(s) 726, 826, 837, 1035
TasI AATT 4 cut(s) 229, 253, 322, 722
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 1 cut(s) 394
Tru1I TTAA 2 cut(s) 278, 1052
Tru9I TTAA 2 cut(s) 278, 1052
TscAI CASTG 2 cut(s) 130, 554
TseFI GTSAC 1 cut(s) 301
TseI GCWGC 1 cut(s) 451
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 4 cut(s) 235, 492, 690, 966
TspRI CASTG 2 cut(s) 130, 554
Tth111I GACNNNGTC 1 cut(s) 602
Vha464I CTTAAG 1 cut(s) 1051
VpaK11BI GGWCC 4 cut(s) 373, 604, 680, 892
XapI RAATTY 1 cut(s) 722
XmiI GTMKAC 1 cut(s) 837
XspI CTAG 3 cut(s) 149, 536, 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.