FvH4_4g12742
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000291
Physical Location & Seq
Reverse (-)
16382899 .. 16384878
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12742.t1

Sequence Viewer

Length: 1980 bp
ATGGGAGACGATTCAGTGGACGAAATCACCATCACCAACTTCGCCGACGCTGGTCGTGCGATTAAAGACATTCAGAAGGATTTACGGGATCATTCGAAACTTGTAGCTGACCAATTCGAAATCTTCCGACAGCAGACACAAGATTTTGTGAGAGAATCAGTGCAAGATGCAACAGAGGAAATTCGACAATTAATTTTGCAGATGAACGTAAATCCAATAGGAGATGCTCATCTCACCAACGGATTTGCCGGAGGTCGTGGACATCGCCGAGAACGCCACATGGGAATTGATGATCAACGCGCTATGGGATTCGCCCGTAGACGTGGCCATCAACAAGGAGGTCAACGTATCGGAGGGTTTGAACGTGACCAAGACTTTGAAGAAACCGCACAACGAGAACTCATTGAATTTGCCAACTTCAATGAAAGGGAACCTACTTATCAACGACGTCAAGGAGGCGAAGACTTTAAGATTAAGGCTGATATCCCTAACTTCACTGGAAATTTAAATGCTGACGAGTTCTTGGATTGGCTAATGGAAGTTGAGAGGTTCTTTGAGCTTATGGGAATCGCTGCAAACAAGCGTGTGAAGTATACAGCTTATAAACTAAAAGGTATTGCAGGGCATTGGTGGCAGCAAATACAAGAAGAGCGATTCGAGTCAGGCTTGGCTCCAATTGTAACCTGGGACGTTATGAAGATGCTCTTGGAAGAAAGATTTTTGCCAGATGATTATGAGCAAACATTATTTGAGCAATACCAAGAGGTTTCTCAAGAGAACAGATCAGTCCAGGACTTCACAACCGATTTCTATCGGCTTGCAGAACGAAACAAATTGAAAGAGACTAAAGCTCAACAAGTTGCAAGATATATACGGGGATTAAATCCTCAAATTCAGGACAAAATTGGGTTGCTTACATTCAAGGATGTTGGAGAAGCTCACAAGATGGCCTTGAAAGTTGAAAAGCTTGCAAAAAGCACCATTGCAACAACAAATAACCGACGGAGCTGGAATGACACAGCAACTTTCAGCAGAACCAAAGAAAGCATTGCAACCAAGCCTCTTAGTATTTCCAACAAACCCATAGAGGGTGGCAGCAAGGTCAGCAGTCAGACCAAAAGGTCTTCTCAAAGCAGTACAAGTAACTCAGACCCGTACGTTAGGCCTCGTTTGAATACATGCTTTAAATGCAGCAAACCAGGGCACATCTCCAGTCAATGTCCTCTACGGCAAACTGAAAAGGTTGAAAGGACTAAAAAGCGTCTTGTTAACTTCATAGAAGGAGATGATGAACAACACGAAGAAGAAGAAGAAGACGAGGTGGTGGAGGAAGCAGAAGAATATTCTGGTGATGACAGGGAGTACAATTTAGTTACTCAACGGCTGTTGTGTTCAACAAAACAAGAAAACCAGCGACATAGTATCTTTCGGAGTACATGCACTATCAAAGAAAAGCCTATGTCATTGATAATAGACAGTGGAAGTTGTGAGAACTTCGTCTCAAAGAAAGTGGTGGAACACTTCAACCTTCTTATTATGAAACATAGAGCTCCATATGCCATTGGATGGATCAAGAAAGGCCCAGAAGTTCGCATCACCGAAACATGTAAAGTGCCAATTTCAATTGGGAAATTCTATCAAGATGAAGTTGAATGTGACGTGGTAGACATGGACGCCAGCCACGTACTTCTAGGCAGACCATTGCAGCATGATGTCAACACTATCCACAATGGAAGAGAAAACACAGTATCGTTCATATGGGAAAAACACCATATTACTTTGAAGCCTAAGACCAAGCCTACAAATCTGGTTTCACCAAAAGAATCTAACTTTCTTATTGTTGCTGAACCTGGTGAAAAGGTGGAAGAACTTGTGAAGGATGCAGAAGCTATTTATCCTTTGGTGGTTAGGGAAGTAATGGTGGCTGAGGACAACAAAGAGGAGAAGAAAATTCCAAAAGAAGTCCAGCAGTTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag zf-CCHC

Protein Analysis

660

Amino Acids

76.01

Weight (kDa)

5.79

Isoelectric Point (pI)

43.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 162 - 335 2.6e-08 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 198 - 296 5.7e-14 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 603
AasI GACNNNNNNGTC 1 cut(s) 1120
AatII GACGTC 1 cut(s) 451
AccB7I CCANNNNNTGG 1 cut(s) 1566
AccI GTMKAC 3 cut(s) 319, 593, 1665
AccII CGCG 1 cut(s) 300
AciI CCGC 1 cut(s) 387
AclWI GGATC 2 cut(s) 96, 1577
AcoI YGGCCR 1 cut(s) 325
AcsI RAATTY 6 cut(s) 180, 407, 502, 891, 1631, 1950
AcyI GRCGYC 2 cut(s) 448, 1674
AfaI GTAC 5 cut(s) 1138, 1157, 1364, 1435, 1686
AfiI CCNNNNNNNGG 2 cut(s) 1088, 1566
AflIII ACRYGT 1 cut(s) 1604
AjiI CACGTC 2 cut(s) 323, 1660
AjnI CCWGG 4 cut(s) 683, 789, 1198, 1849
AjuI GAANNNNNNNTTGG 2 cut(s) 689, 721
AluBI AGCT 9 cut(s) 107, 559, 599, 851, 938, 967, 1008, 1550, 1889
AluI AGCT 9 cut(s) 107, 559, 599, 851, 938, 967, 1008, 1550, 1889
Alw21I GWGCWC 1 cut(s) 1552
Alw26I GTCTC 2 cut(s) 836, 1504
AlwI GGATC 2 cut(s) 96, 1577
AlwNI CAGNNNCTG 1 cut(s) 1975
AoxI GGCC 4 cut(s) 325, 948, 1163, 1579
ApeKI GCWGC 5 cut(s) 572, 634, 1095, 1191, 1705
ApoI RAATTY 6 cut(s) 180, 407, 502, 891, 1631, 1950
ArsI GACNNNNNNTTYG 2 cut(s) 359, 391
AseI ATTAAT 1 cut(s) 191
AspLEI GCGC 1 cut(s) 302
AspS9I GGNCC 1 cut(s) 1580
AsuHPI GGTGA 7 cut(s) 19, 25, 226, 1361, 1588, 1806, 1865
AsuII TTCGAA 2 cut(s) 95, 117
BaeGI GKGCMC 1 cut(s) 1206
BalI TGGCCA 1 cut(s) 327
BanII GRGCYC 1 cut(s) 1552
BbsI GAAGAC 3 cut(s) 468, 1116, 1320
Bbv12I GWGCWC 1 cut(s) 1552
BbvCI CCTCAGC 1 cut(s) 1926
BbvI GCAGC 5 cut(s) 559, 646, 1107, 1203, 1717
BccI CCATC 4 cut(s) 38, 336, 940, 1560
BceAI ACGGC 2 cut(s) 1244, 1397
BciT130I CCWGG 4 cut(s) 685, 791, 1200, 1851
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 2 cut(s) 836, 1504
BfaI CTAG 1 cut(s) 1691
BfmI CTRYAG 1 cut(s) 1976
BisI GCNGC 5 cut(s) 573, 635, 1096, 1192, 1706
BlsI GCNGC 5 cut(s) 574, 636, 1097, 1193, 1707
Bme1390I CCNGG 4 cut(s) 685, 791, 1200, 1851
BmgBI CACGTC 2 cut(s) 323, 1660
BmgT120I GGNCC 1 cut(s) 1580
BmiI GGNNCC 2 cut(s) 432, 672
BmrFI CCNGG 4 cut(s) 685, 791, 1200, 1851
BmsI GCATC 5 cut(s) 157, 214, 690, 1602, 1870
BoxI GACNNNNGTC 1 cut(s) 51
BpiI GAAGAC 3 cut(s) 468, 1116, 1320
BpmI CTGGAG 1 cut(s) 1195
Bpu10I CCTNAGC 1 cut(s) 1926
Bpu14I TTCGAA 2 cut(s) 95, 117
BpuEI CTTGAG 1 cut(s) 756
BsaAI YACGTR 1 cut(s) 1684
BsaBI GATNNNNATC 2 cut(s) 228, 810
BsaHI GRCGYC 2 cut(s) 448, 1674
BsaJI CCNNGG 2 cut(s) 684, 1199
Bsc4I CCNNNNNNNGG 2 cut(s) 1088, 1566
Bse1I ACTGG 2 cut(s) 502, 1212
Bse3DI GCAATG 3 cut(s) 981, 1047, 1700
Bse8I GATNNNNATC 2 cut(s) 228, 810
BseBI CCWGG 4 cut(s) 685, 791, 1200, 1851
BseDI CCNNGG 2 cut(s) 684, 1199
BseGI GGATG 3 cut(s) 931, 1571, 1885
BseJI GATNNNNATC 2 cut(s) 228, 810
BseLI CCNNNNNNNGG 2 cut(s) 1088, 1566
BseMI GCAATG 3 cut(s) 981, 1047, 1700
BseMII CTCAG 2 cut(s) 1161, 1917
BseNI ACTGG 2 cut(s) 502, 1212
BseRI GAGGAG 1 cut(s) 1955
BseSI GKGCMC 1 cut(s) 1206
BseXI GCAGC 5 cut(s) 559, 646, 1107, 1203, 1717
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 4 cut(s) 327, 950, 1165, 1581
BsiHKAI GWGCWC 1 cut(s) 1552
BsiSI CCGG 1 cut(s) 249
BsiWI CGTACG 1 cut(s) 1155
BslFI GGGAC 1 cut(s) 701
BslI CCNNNNNNNGG 2 cut(s) 1088, 1566
BsmAI GTCTC 2 cut(s) 836, 1504
BsmBI CGTCTC 1 cut(s) 1504
BsmFI GGGAC 1 cut(s) 701
BsnI GGCC 4 cut(s) 327, 950, 1165, 1581
Bsp119I TTCGAA 2 cut(s) 95, 117
Bsp1286I GDGCHC 2 cut(s) 1206, 1552
Bsp143I GATC 4 cut(s) 88, 292, 782, 1569
BspACI CCGC 1 cut(s) 387
BspANI GGCC 4 cut(s) 327, 950, 1165, 1581
BspCNI CTCAG 2 cut(s) 1160, 1918
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 2 cut(s) 432, 672
BspPI GGATC 2 cut(s) 96, 1577
BspQI GCTCTTC 1 cut(s) 642
BspT104I TTCGAA 2 cut(s) 95, 117
BsrDI GCAATG 3 cut(s) 981, 1047, 1700
BsrI ACTGG 2 cut(s) 502, 1212
BssECI CCNNGG 2 cut(s) 684, 1199
BssMI GATC 4 cut(s) 88, 292, 782, 1569
BssNAI GTATAC 1 cut(s) 594
BssNI GRCGYC 2 cut(s) 448, 1674
Bst1107I GTATAC 1 cut(s) 594
Bst2UI CCWGG 4 cut(s) 685, 791, 1200, 1851
Bst4CI ACNGT 3 cut(s) 1478, 1747, 1977
Bst6I CTCTTC 2 cut(s) 642, 1729
BstACI GRCGYC 2 cut(s) 448, 1674
BstBAI YACGTR 1 cut(s) 1684
BstBI TTCGAA 2 cut(s) 95, 117
BstC8I GCNNGC 3 cut(s) 819, 969, 1678
BstDEI CTNAG 4 cut(s) 1064, 1147, 1788, 1926
BstF5I GGATG 3 cut(s) 931, 1571, 1885
BstFNI CGCG 1 cut(s) 300
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 4 cut(s) 91, 295, 785, 1572
BstMAI GTCTC 2 cut(s) 836, 1504
BstMBI GATC 4 cut(s) 88, 292, 782, 1569
BstMWI GCNNNNNNNGC 6 cut(s) 56, 273, 631, 1104, 1188, 1556
BstNI CCWGG 4 cut(s) 685, 791, 1200, 1851
BstNSI RCATGY 3 cut(s) 1182, 1440, 1608
BstPAI GACNNNNGTC 1 cut(s) 51
BstSCI CCNGG 4 cut(s) 683, 789, 1198, 1849
BstSFI CTRYAG 1 cut(s) 1976
BstSLI GKGCMC 1 cut(s) 1206
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 5 cut(s) 559, 646, 1107, 1203, 1717
BstV2I GAAGAC 3 cut(s) 468, 1116, 1320
BstZ17I GTATAC 1 cut(s) 594
BsuRI GGCC 4 cut(s) 327, 950, 1165, 1581
BtgZI GCGATG 1 cut(s) 248
BtrI CACGTC 2 cut(s) 323, 1660
BtsCI GGATG 3 cut(s) 931, 1571, 1885
BtsIMutI CAGTG 4 cut(s) 21, 165, 495, 1483
Cac8I GCNNGC 3 cut(s) 819, 969, 1678
CaiI CAGNNNCTG 1 cut(s) 1975
CfoI GCGC 1 cut(s) 302
Cfr13I GGNCC 1 cut(s) 1580
CseI GACGC 3 cut(s) 56, 1250, 1682
CsiI ACCWGGT 1 cut(s) 1849
Csp6I GTAC 5 cut(s) 1137, 1156, 1363, 1434, 1685
CspCI CAANNNNNGTGG 2 cut(s) 1491, 1526
CviAII CATG 6 cut(s) 280, 1179, 1437, 1605, 1669, 1709
CviQI GTAC 5 cut(s) 1137, 1156, 1363, 1434, 1685
DdeI CTNAG 4 cut(s) 1064, 1147, 1788, 1926
DpnI GATC 4 cut(s) 90, 294, 784, 1571
DpnII GATC 4 cut(s) 88, 292, 782, 1569
DraI TTTAAA 2 cut(s) 507, 1186
DrdI GACNNNNNNGTC 1 cut(s) 1120
DseDI GACNNNNNNGTC 1 cut(s) 1120
EaeI YGGCCR 1 cut(s) 325
Eam1104I CTCTTC 2 cut(s) 642, 1729
EarI CTCTTC 2 cut(s) 642, 1729
Ecl136II GAGCTC 1 cut(s) 1550
Eco147I AGGCCT 1 cut(s) 1165
Eco24I GRGCYC 1 cut(s) 1552
Eco32I GATATC 1 cut(s) 484
Eco53kI GAGCTC 1 cut(s) 1550
EcoICRI GAGCTC 1 cut(s) 1550
EcoRII CCWGG 4 cut(s) 683, 789, 1198, 1849
EcoRV GATATC 1 cut(s) 484
EcoT38I GRGCYC 1 cut(s) 1552
Esp3I CGTCTC 1 cut(s) 1504
FaeI CATG 6 cut(s) 283, 1182, 1440, 1608, 1672, 1712
FalI AAGNNNNNCTT 4 cut(s) 689, 721, 935, 967
FaqI GGGAC 1 cut(s) 701
FatI CATG 6 cut(s) 279, 1178, 1436, 1604, 1668, 1708
FauNDI CATATG 2 cut(s) 1555, 1757
FbaI TGATCA 1 cut(s) 292
FblI GTMKAC 3 cut(s) 319, 593, 1665
Fnu4HI GCNGC 5 cut(s) 573, 635, 1096, 1192, 1706
FokI GGATG 3 cut(s) 938, 1578, 1892
FriOI GRGCYC 1 cut(s) 1552
Fsp4HI GCNGC 5 cut(s) 573, 635, 1096, 1192, 1706
FspBI CTAG 1 cut(s) 1691
GlaI GCGC 1 cut(s) 301
GluI GCNGC 5 cut(s) 573, 635, 1096, 1192, 1706
GsuI CTGGAG 1 cut(s) 1195
HaeIII GGCC 4 cut(s) 327, 950, 1165, 1581
HapII CCGG 1 cut(s) 249
HgaI GACGC 3 cut(s) 56, 1250, 1682
HhaI GCGC 1 cut(s) 302
Hin1I GRCGYC 2 cut(s) 448, 1674
Hin1II CATG 6 cut(s) 283, 1182, 1440, 1608, 1672, 1712
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HincII GTYRAC 3 cut(s) 344, 1270, 1717
HindII GTYRAC 3 cut(s) 344, 1270, 1717
HindIII AAGCTT 1 cut(s) 965
HinfI GANTC 7 cut(s) 11, 155, 309, 567, 654, 659, 1823
HpaI GTTAAC 1 cut(s) 1270
HpaII CCGG 1 cut(s) 249
HphI GGTGA 7 cut(s) 19, 25, 226, 1361, 1588, 1806, 1865
Hpy166II GTNNAC 8 cut(s) 19, 260, 320, 344, 594, 1270, 1666, 1717
Hpy188I TCNGA 6 cut(s) 75, 128, 353, 1113, 1150, 1431
Hpy188III TCNNGA 4 cut(s) 773, 896, 1573, 1640
Hpy8I GTNNAC 8 cut(s) 19, 260, 320, 344, 594, 1270, 1666, 1717
Hpy99I CGWCG 3 cut(s) 50, 450, 1005
HpyAV CCTTC 4 cut(s) 70, 1274, 1538, 1870
HpyCH4III ACNGT 3 cut(s) 1478, 1747, 1977
HpyCH4IV ACGT 9 cut(s) 207, 322, 346, 364, 448, 690, 1158, 1659, 1683
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 273, 631, 1104, 1188, 1556
HpyF3I CTNAG 4 cut(s) 1064, 1147, 1788, 1926
HpySE526I ACGT 9 cut(s) 207, 322, 346, 364, 448, 690, 1158, 1659, 1683
Hsp92I GRCGYC 2 cut(s) 448, 1674
Hsp92II CATG 6 cut(s) 283, 1182, 1440, 1608, 1672, 1712
HspAI GCGC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 292
KspAI GTTAAC 1 cut(s) 1270
Kzo9I GATC 4 cut(s) 88, 292, 782, 1569
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 3 cut(s) 676, 1005, 1555
Lsp1109I GCAGC 5 cut(s) 559, 646, 1107, 1203, 1717
LweI GCATC 5 cut(s) 157, 214, 690, 1602, 1870
MabI ACCWGGT 1 cut(s) 1849
MaeI CTAG 1 cut(s) 1691
MaeII ACGT 9 cut(s) 207, 322, 346, 364, 448, 690, 1158, 1659, 1683
MaeIII GTNAC 6 cut(s) 365, 679, 1142, 1372, 1655, 1971
MalI GATC 4 cut(s) 90, 294, 784, 1571
MboI GATC 4 cut(s) 88, 292, 782, 1569
MfeI CAATTG 2 cut(s) 675, 1623
MhlI GDGCHC 2 cut(s) 1206, 1552
MlsI TGGCCA 1 cut(s) 327
MluNI TGGCCA 1 cut(s) 327
MlyI GAGTC 1 cut(s) 668
MmeI TCCRAC 3 cut(s) 151, 910, 1098
Mox20I TGGCCA 1 cut(s) 327
MscI TGGCCA 1 cut(s) 327
MseI TTAA 8 cut(s) 63, 191, 468, 474, 506, 881, 1185, 1269
Msp20I TGGCCA 1 cut(s) 327
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 4 cut(s) 685, 791, 1200, 1851
MunI CAATTG 2 cut(s) 675, 1623
MvaI CCWGG 4 cut(s) 685, 791, 1200, 1851
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 6 cut(s) 56, 273, 631, 1104, 1188, 1556
NdeI CATATG 2 cut(s) 1555, 1757
NdeII GATC 4 cut(s) 88, 292, 782, 1569
NlaIII CATG 6 cut(s) 283, 1182, 1440, 1608, 1672, 1712
NlaIV GGNNCC 2 cut(s) 432, 672
NmeAIII GCCGAG 1 cut(s) 293
NmuCI GTSAC 2 cut(s) 365, 1655
NspI RCATGY 3 cut(s) 1182, 1440, 1608
NspV TTCGAA 2 cut(s) 95, 117
PceI AGGCCT 1 cut(s) 1165
PciI ACATGT 1 cut(s) 1604
PciSI GCTCTTC 1 cut(s) 642
PcsI WCGNNNNNNNCGW 1 cut(s) 1680
PfeI GAWTC 6 cut(s) 11, 155, 309, 567, 654, 1823
Pfl23II CGTACG 1 cut(s) 1155
PflMI CCANNNNNTGG 1 cut(s) 1566
PfoI TCCNGGA 1 cut(s) 789
PkrI GCNGC 5 cut(s) 574, 636, 1097, 1193, 1707
PleI GAGTC 1 cut(s) 667
PpsI GAGTC 1 cut(s) 667
Ppu21I YACGTR 1 cut(s) 1684
PscI ACATGT 1 cut(s) 1604
PshAI GACNNNNGTC 1 cut(s) 51
PshBI ATTAAT 1 cut(s) 191
PsiI TTATAA 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 1552
Psp6I CCWGG 4 cut(s) 683, 789, 1198, 1849
PspGI CCWGG 4 cut(s) 683, 789, 1198, 1849
PspLI CGTACG 1 cut(s) 1155
PspN4I GGNNCC 2 cut(s) 432, 672
PspPI GGNCC 1 cut(s) 1580
PstNI CAGNNNCTG 1 cut(s) 1975
RsaI GTAC 5 cut(s) 1138, 1157, 1364, 1435, 1686
RsaNI GTAC 5 cut(s) 1137, 1156, 1363, 1434, 1685
SacI GAGCTC 1 cut(s) 1552
SapI GCTCTTC 1 cut(s) 642
SaqAI TTAA 8 cut(s) 63, 191, 468, 474, 506, 881, 1185, 1269
SatI GCNGC 5 cut(s) 573, 635, 1096, 1192, 1706
Sau3AI GATC 4 cut(s) 88, 292, 782, 1569
Sau96I GGNCC 1 cut(s) 1580
SchI GAGTC 1 cut(s) 668
ScrFI CCNGG 4 cut(s) 685, 791, 1200, 1851
SduI GDGCHC 2 cut(s) 1206, 1552
SexAI ACCWGGT 1 cut(s) 1849
SfaNI GCATC 5 cut(s) 157, 214, 690, 1602, 1870
SfcI CTRYAG 1 cut(s) 1976
SfuI TTCGAA 2 cut(s) 95, 117
SmiI ATTTAAAT 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 771
SmoI CTYRAG 1 cut(s) 771
SseBI AGGCCT 1 cut(s) 1165
SsiI CCGC 1 cut(s) 387
SspI AATATT 1 cut(s) 1343
SspMI CTAG 1 cut(s) 1691
SstI GAGCTC 1 cut(s) 1552
StuI AGGCCT 1 cut(s) 1165
StyD4I CCNGG 4 cut(s) 683, 789, 1198, 1849
SwaI ATTTAAAT 1 cut(s) 507
TaaI ACNGT 3 cut(s) 1478, 1747, 1977
TaiI ACGT 9 cut(s) 210, 325, 349, 367, 451, 693, 1161, 1662, 1686
TaqI TCGA 4 cut(s) 95, 117, 184, 657
TatI WGTACW 3 cut(s) 1136, 1362, 1433
TfiI GAWTC 6 cut(s) 11, 155, 309, 567, 654, 1823
Tru1I TTAA 8 cut(s) 63, 191, 468, 474, 506, 881, 1185, 1269
Tru9I TTAA 8 cut(s) 63, 191, 468, 474, 506, 881, 1185, 1269
TscAI CASTG 4 cut(s) 21, 165, 502, 1483
TseFI GTSAC 2 cut(s) 365, 1655
TseI GCWGC 5 cut(s) 572, 634, 1095, 1191, 1705
Tsp45I GTSAC 2 cut(s) 365, 1655
TspDTI ATGAA 8 cut(s) 218, 438, 710, 1264, 1305, 1553, 1659, 1744
TspGWI ACGGA 2 cut(s) 255, 1018
TspRI CASTG 4 cut(s) 21, 165, 502, 1483
Van91I CCANNNNNTGG 1 cut(s) 1566
VspI ATTAAT 1 cut(s) 191
XapI RAATTY 6 cut(s) 180, 407, 502, 891, 1631, 1950
XceI RCATGY 3 cut(s) 1182, 1440, 1608
XcmI CCANNNNNNNNNTGG 1 cut(s) 681
XmiI GTMKAC 3 cut(s) 319, 593, 1665
XspI CTAG 1 cut(s) 1691
ZraI GACGTC 1 cut(s) 449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.