Rw7G033750
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000291
Physical Location & Seq
Reverse (-)
49834033 .. 49836303
2271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G033750.1

Sequence Viewer

Length: 2166 bp
ATGGGTGAAGTTACGAAATCTGATATTGAAGCTCTTACAGCAGCGTTTACCGCTGCCATCAATTCCATGAATAATCAGATTGGAGAAATTCGTGGATTGTTGGGTGAGAGGAACAACAACAACAACAACAACAATAATCGGCGTAGAGATGGGGAAGGAGGCCAGCGAGTTAGGGCTCCCCGTGGTGAAGTTGTTGATAACACGTCAGAATCTGAGCCTGAAGAAGAAATTTTACAACAAGAGCAACATGGACAAGCTGACCAGGATTACAAAGTGAAGGCCGAAATTCCTTTCTTTTCTGGCAATTTGGGTGTAGAAGATTATTTGGATTGGCAGCTTCAAGTGGACAGATTCTTTGAGATTATGGAAGTGCCTGAACACAAGCAAGTTAAACATGTTGCCTGGAGATTGAAGAGTACTGCTGCAGTATGGTGGGATAAGTTGCAGAACACTCGAAAGAAGCAGAGGAAGCAGGGTGTTAGAACATGGCGAAGAATGAAGCAGTTGATGATGGAGAGGTTCTTGCCAGATGATTATGAGCAGATTCTATATAGGCTGTATATTGAATGTGTCCAAGGAGCTAGGACGGTGGCTGATTATACGGCTGAATTCTTACGTTATTCAGAGCGTAATGAATTGGGAGAAACTGAAGGCCAGAAGGTGGCTCGCTATATCAGTGGGTTGAAGCCTTCCATTCAGGAGAGAATTGGGTTGCAAACTGTTCATACTATGGCCGAAGTGACAAACCTATCATTGAAAGCAGAGTTGTTGGAGAAACCTTCACGAGCTTCTTCTTTCCAGAGGTATAACTACCAAAGGAGTGCAGATTTGGTTAATGCTTCAACTGCCAAGGGTACAACTACACTGCAGAGAGCAGAAAACGCCTTTAAAGCTTCTAATCCTCCTTTTAAAGGCGCGGGCAGTTCTAACAATTCTAGTGATGTCTGTTATCGATGCAACAAGCCTGGGCATAGATCTAATGTGTGTCCTGAGAGGAGACAAACTGCCCTTATCGATGATTATGATGAGGATGAAGAAGAAGTTAGGAGAGATGACGATTATGATGGAGCTGAGTTTGCGGAGGAGGAATCCCCTGAGAAGGTTAACATTGTGTTGCAGCGGGTTCTACTATGTCCTAAAGAAGAGGGGCAGCGGCGCAATATTTTCAGGTCACTTTGTTCCATTAATAACAAAGTGTGTAATTTAATTGTGGATAATGGGAGCTGCGAAAATTTTGTAGCCAAGAAACTGGTGGAGTATTTGCAGTTACAGGCGCAGCCTCATGAGGCACCTTATTCCCTCGGGTGGGTCAAGAAAGGTCCACAACATTATAAAGATGAAGTTTTGTGCGACATTATTGATATGGATGCTTGTCATATTTTGTTTGGCCGACCTTGGCAATATGATGTGGATATTACTTATAAAGGCAGGGACAATGTGATGTTGTTTATGTGGAATAACCATAAAATTGCTATGGCTCCTGTGTGTCAATTTGAGAAATCTGATGTGAAGAAAGGGGAGAGTTTCCTGACCTTATCTAGCAGTGAACTTGAGATGGAGAGGGCCTTTAAAGAATCTGAGGTTTTCTGTCCAGTGGTGATAAAGGGGTTGTTGTCTGCAGAAAAGGAAGAAGTGGTGATTCCCAAAGAAGTGCAGGACATGTTGGGAGATTTTGAAGAGTTGATCTCGGATGAGTTACCCAACGAGCTGCCACCTATGAGAGACATTCAACATCAGATTGATTTGGTGCCTGGAGCTAGCTTGCCCAATCTGCCACATTACCGAATGAGTCCCAAGGAGAATGAGATTTTGAGAGAGCAGATTGAAGACTTGTTGAAAAAAGGGTTCATTCGAGAGAGTATGAGTCCTTGTGCAGTTCCAGTCCTCCTTGTTCCTAAGAAGGGCAATCAATGGCGGATGTGTGTTGATAGCAGGGCCATTAACAAGATAACTGTGAAGTACAGGTTTCCTATTCCTCGTTTGGAAGACATGCTTGATGAGCTAGAAGGTTCCAAAGTGTTTACCAAGATAGACCTTCGAAGTGGATATCACCAGATTCGAATCAAGCCAGGGATGAATGGAAGACAGCTTTTAAGAGCAAGGATGGCTTGTACGAGTGGATGGTTATGCCATTCGGGTTGTCTAATGCACCCAGCACTTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

721

Amino Acids

82.81

Weight (kDa)

5.8

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 120 - 258 1.7e-07 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 132 - 230 1.4e-12 Retrotransposon gag protein
RVT_1 PF00078 631 - 696 1.2e-10 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1332, 1422
AccB1I GGYRCC 2 cut(s) 1288, 1747
AccB7I CCANNNNNTGG 1 cut(s) 661
AccII CGCG 1 cut(s) 917
AciI CCGC 6 cut(s) 51, 917, 1079, 1120, 1153, 1915
AcoI YGGCCR 2 cut(s) 732, 1387
AcsI RAATTY 5 cut(s) 87, 228, 285, 608, 1231
AcuI CTGAAG 2 cut(s) 240, 669
AfaI GTAC 4 cut(s) 418, 856, 1961, 2113
AfiI CCNNNNNNNGG 6 cut(s) 661, 911, 1099, 1305, 1306, 1901
AflIII ACRYGT 3 cut(s) 201, 394, 1659
AjiI CACGTC 1 cut(s) 204
AjnI CCWGG 5 cut(s) 261, 401, 964, 1750, 2068
Alw26I GTCTC 2 cut(s) 991, 1716
AlwNI CAGNNNCTG 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 1301
AoxI GGCC 7 cut(s) 160, 279, 652, 732, 1387, 1563, 1935
ApeKI GCWGC 9 cut(s) 41, 53, 334, 422, 1117, 1150, 1224, 1276, 1708
ApoI RAATTY 5 cut(s) 87, 228, 285, 608, 1231
ArsI GACNNNNNNTTYG 2 cut(s) 338, 370
AseI ATTAAT 1 cut(s) 1185
AspLEI GCGC 3 cut(s) 917, 1158, 1276
AspS9I GGNCC 3 cut(s) 1319, 1563, 1935
AsuHPI GGTGA 6 cut(s) 17, 116, 197, 1609, 1648, 2042
AsuII TTCGAA 2 cut(s) 2038, 2059
AsuNHI GCTAGC 1 cut(s) 1757
AvaI CYCGRG 1 cut(s) 1301
AvaII GGWCC 1 cut(s) 1319
BanI GGYRCC 2 cut(s) 1288, 1747
BanII GRGCYC 1 cut(s) 178
BarI GAAGNNNNNNTAC 2 cut(s) 216, 248
BauI CACGAG 1 cut(s) 783
BbsI GAAGAC 3 cut(s) 1833, 1992, 2089
BbvI GCAGC 9 cut(s) 40, 53, 346, 409, 1129, 1162, 1211, 1288, 1695
BccI CCATC 7 cut(s) 65, 143, 505, 1058, 1549, 2098, 2115
BceAI ACGGC 1 cut(s) 618
BcgI CGANNNNNNTGC 2 cut(s) 434, 468
BciT130I CCWGG 5 cut(s) 263, 403, 966, 1752, 2070
BcoDI GTCTC 2 cut(s) 991, 1716
BfaI CTAG 5 cut(s) 582, 936, 1539, 1758, 2003
BfmI CTRYAG 3 cut(s) 423, 866, 1617
BglII AGATCT 1 cut(s) 974
BmcAI AGTACT 1 cut(s) 418
Bme1390I CCNGG 5 cut(s) 263, 403, 966, 1752, 2070
Bme18I GGWCC 1 cut(s) 1319
BmeT110I CYCGRG 1 cut(s) 1301
BmgBI CACGTC 1 cut(s) 204
BmgT120I GGNCC 3 cut(s) 1319, 1563, 1935
BmiI GGNNCC 5 cut(s) 177, 1290, 1479, 1749, 2011
BmrFI CCNGG 5 cut(s) 263, 403, 966, 1752, 2070
BmsI GCATC 2 cut(s) 944, 1357
BmtI GCTAGC 1 cut(s) 1761
BpiI GAAGAC 3 cut(s) 1833, 1992, 2089
BplI GAGNNNNNCTC 2 cut(s) 1670, 1702
BpmI CTGGAG 2 cut(s) 424, 1773
Bpu14I TTCGAA 2 cut(s) 2038, 2059
BpuEI CTTGAG 1 cut(s) 1571
Bsa29I ATCGAT 2 cut(s) 952, 1014
BsaBI GATNNNNATC 1 cut(s) 2060
BsaJI CCNNGG 8 cut(s) 181, 574, 849, 965, 1300, 1394, 1794, 2069
Bsc4I CCNNNNNNNGG 6 cut(s) 661, 911, 1099, 1305, 1306, 1901
Bse1I ACTGG 3 cut(s) 1254, 1592, 1880
Bse8I GATNNNNATC 1 cut(s) 2060
BseBI CCWGG 5 cut(s) 263, 403, 966, 1752, 2070
BseCI ATCGAT 2 cut(s) 952, 1014
BseDI CCNNGG 8 cut(s) 181, 574, 849, 965, 1300, 1394, 1794, 2069
BseGI GGATG 7 cut(s) 1036, 1372, 1696, 1923, 2079, 2109, 2126
BseJI GATNNNNATC 1 cut(s) 2060
BseLI CCNNNNNNNGG 6 cut(s) 661, 911, 1099, 1305, 1306, 1901
BseMII CTCAG 5 cut(s) 204, 981, 1062, 1086, 1569
BseNI ACTGG 3 cut(s) 1254, 1592, 1880
BseRI GAGGAG 2 cut(s) 1009, 1097
BseXI GCAGC 9 cut(s) 40, 53, 346, 409, 1129, 1162, 1211, 1288, 1695
BseYI CCCAGC 1 cut(s) 2152
BsgI GTGCAG 3 cut(s) 843, 1673, 1893
Bsh1236I CGCG 1 cut(s) 917
BshFI GGCC 7 cut(s) 162, 281, 654, 734, 1389, 1565, 1937
BshNI GGYRCC 2 cut(s) 1288, 1747
BshVI ATCGAT 2 cut(s) 952, 1014
BsiHKCI CYCGRG 1 cut(s) 1301
BslFI GGGAC 2 cut(s) 1445, 1776
BslI CCNNNNNNNGG 6 cut(s) 661, 911, 1099, 1305, 1306, 1901
BsmAI GTCTC 2 cut(s) 991, 1716
BsmFI GGGAC 2 cut(s) 1445, 1776
BsnI GGCC 7 cut(s) 162, 281, 654, 734, 1389, 1565, 1937
BsoBI CYCGRG 1 cut(s) 1301
Bsp119I TTCGAA 2 cut(s) 2038, 2059
Bsp1286I GDGCHC 1 cut(s) 178
Bsp143I GATC 2 cut(s) 974, 1683
BspACI CCGC 6 cut(s) 51, 917, 1079, 1120, 1153, 1915
BspANI GGCC 7 cut(s) 162, 281, 654, 734, 1389, 1565, 1937
BspCNI CTCAG 5 cut(s) 205, 982, 1063, 1087, 1570
BspDI ATCGAT 2 cut(s) 952, 1014
BspFNI CGCG 1 cut(s) 917
BspHI TCATGA 1 cut(s) 1282
BspLI GGNNCC 5 cut(s) 177, 1290, 1479, 1749, 2011
BspMAI CTGCAG 3 cut(s) 427, 870, 1621
BspOI GCTAGC 1 cut(s) 1761
BspT104I TTCGAA 2 cut(s) 2038, 2059
BspT107I GGYRCC 2 cut(s) 1288, 1747
BsrI ACTGG 3 cut(s) 1254, 1592, 1880
BssECI CCNNGG 8 cut(s) 181, 574, 849, 965, 1300, 1394, 1794, 2069
BssMI GATC 2 cut(s) 974, 1683
BssSI CACGAG 1 cut(s) 783
BssT1I CCWWGG 4 cut(s) 574, 849, 1394, 1794
Bst2BI CACGAG 1 cut(s) 783
Bst2UI CCWGG 5 cut(s) 263, 403, 966, 1752, 2070
Bst4CI ACNGT 3 cut(s) 589, 721, 1954
Bst6I CTCTTC 3 cut(s) 407, 1137, 1671
BstBI TTCGAA 2 cut(s) 2038, 2059
BstC8I GCNNGC 5 cut(s) 164, 667, 919, 1759, 1763
BstDEI CTNAG 6 cut(s) 213, 990, 1071, 1095, 1578, 1896
BstDSI CCRYGG 1 cut(s) 181
BstENI CCTNNNNNAGG 1 cut(s) 909
BstF5I GGATG 7 cut(s) 1036, 1372, 1696, 1923, 2079, 2109, 2126
BstFNI CGCG 1 cut(s) 917
BstHHI GCGC 3 cut(s) 917, 1158, 1276
BstKTI GATC 2 cut(s) 977, 1686
BstMAI GTCTC 2 cut(s) 991, 1716
BstMBI GATC 2 cut(s) 974, 1683
BstNI CCWGG 5 cut(s) 263, 403, 966, 1752, 2070
BstNSI RCATGY 3 cut(s) 398, 1663, 1993
BstSCI CCNGG 5 cut(s) 261, 401, 964, 1750, 2068
BstSFI CTRYAG 3 cut(s) 423, 866, 1617
BstUI CGCG 1 cut(s) 917
BstV1I GCAGC 9 cut(s) 40, 53, 346, 409, 1129, 1162, 1211, 1288, 1695
BstV2I GAAGAC 3 cut(s) 1833, 1992, 2089
BstX2I RGATCY 1 cut(s) 974
BstXI CCANNNNNNTGG 1 cut(s) 1249
BstYI RGATCY 1 cut(s) 974
Bsu15I ATCGAT 2 cut(s) 952, 1014
BsuRI GGCC 7 cut(s) 162, 281, 654, 734, 1389, 1565, 1937
BsuTUI ATCGAT 2 cut(s) 952, 1014
BtgI CCRYGG 1 cut(s) 181
BtrI CACGTC 1 cut(s) 204
BtsCI GGATG 7 cut(s) 1036, 1372, 1696, 1923, 2079, 2109, 2126
BtsI GCAGTG 2 cut(s) 863, 1549
BtsIMutI CAGTG 4 cut(s) 682, 863, 1549, 1599
Cac8I GCNNGC 5 cut(s) 164, 667, 919, 1759, 1763
CaiI CAGNNNCTG 1 cut(s) 212
CciI TCATGA 1 cut(s) 1282
CfoI GCGC 3 cut(s) 917, 1158, 1276
Cfr13I GGNCC 3 cut(s) 1319, 1563, 1935
ClaI ATCGAT 2 cut(s) 952, 1014
Csp6I GTAC 4 cut(s) 417, 855, 1960, 2112
CviAII CATG 7 cut(s) 67, 248, 395, 486, 1283, 1660, 1990
CviQI GTAC 4 cut(s) 417, 855, 1960, 2112
DdeI CTNAG 6 cut(s) 213, 990, 1071, 1095, 1578, 1896
DpnI GATC 2 cut(s) 976, 1685
DpnII GATC 2 cut(s) 974, 1683
DraI TTTAAA 3 cut(s) 889, 910, 1570
EaeI YGGCCR 2 cut(s) 732, 1387
Eam1104I CTCTTC 3 cut(s) 407, 1137, 1671
EarI CTCTTC 3 cut(s) 407, 1137, 1671
EciI GGCGGA 1 cut(s) 1930
Eco130I CCWWGG 4 cut(s) 574, 849, 1394, 1794
Eco24I GRGCYC 1 cut(s) 178
Eco32I GATATC 1 cut(s) 2048
Eco47I GGWCC 1 cut(s) 1319
Eco57I CTGAAG 2 cut(s) 240, 669
Eco88I CYCGRG 1 cut(s) 1301
EcoNI CCTNNNNNAGG 1 cut(s) 909
EcoO109I RGGNCCY 1 cut(s) 1563
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 5 cut(s) 261, 401, 964, 1750, 2068
EcoRV GATATC 1 cut(s) 2048
EcoT14I CCWWGG 4 cut(s) 574, 849, 1394, 1794
EcoT38I GRGCYC 1 cut(s) 178
ErhI CCWWGG 4 cut(s) 574, 849, 1394, 1794
FaeI CATG 7 cut(s) 70, 251, 398, 489, 1286, 1663, 1993
FalI AAGNNNNNCTT 4 cut(s) 1977, 2009, 2092, 2124
FaqI GGGAC 2 cut(s) 1445, 1776
FatI CATG 7 cut(s) 66, 247, 394, 485, 1282, 1659, 1989
FauI CCCGC 2 cut(s) 910, 1113
FokI GGATG 7 cut(s) 1043, 1379, 1703, 1930, 2086, 2116, 2133
FriOI GRGCYC 1 cut(s) 178
FspBI CTAG 5 cut(s) 582, 936, 1539, 1758, 2003
GlaI GCGC 3 cut(s) 916, 1157, 1275
GsaI CCCAGC 1 cut(s) 2156
GsuI CTGGAG 2 cut(s) 424, 1773
HaeIII GGCC 7 cut(s) 162, 281, 654, 734, 1389, 1565, 1937
HhaI GCGC 3 cut(s) 917, 1158, 1276
Hin1II CATG 7 cut(s) 70, 251, 398, 489, 1286, 1663, 1993
Hin6I GCGC 3 cut(s) 915, 1156, 1274
HinP1I GCGC 3 cut(s) 915, 1156, 1274
HincII GTYRAC 1 cut(s) 1105
HindII GTYRAC 1 cut(s) 1105
HindIII AAGCTT 1 cut(s) 891
HpaI GTTAAC 1 cut(s) 1105
HphI GGTGA 6 cut(s) 17, 116, 197, 1609, 1648, 2042
Hpy166II GTNNAC 6 cut(s) 48, 346, 1105, 1322, 1547, 2022
Hpy188I TCNGA 9 cut(s) 22, 78, 208, 214, 625, 1504, 1579, 1690, 1737
Hpy188III TCNNGA 8 cut(s) 698, 783, 799, 989, 1283, 1312, 1528, 1853
Hpy8I GTNNAC 6 cut(s) 48, 346, 1105, 1322, 1547, 2022
HpyCH4III ACNGT 3 cut(s) 589, 721, 1954
HpyCH4IV ACGT 2 cut(s) 203, 616
HpyF3I CTNAG 6 cut(s) 213, 990, 1071, 1095, 1578, 1896
HpySE526I ACGT 2 cut(s) 203, 616
Hsp92II CATG 7 cut(s) 70, 251, 398, 489, 1286, 1663, 1993
HspAI GCGC 3 cut(s) 915, 1156, 1274
KspAI GTTAAC 1 cut(s) 1105
Kzo9I GATC 2 cut(s) 974, 1683
LmnI GCTCC 6 cut(s) 181, 578, 1067, 1221, 1483, 1754
Lsp1109I GCAGC 9 cut(s) 40, 53, 346, 409, 1129, 1162, 1211, 1288, 1695
LweI GCATC 2 cut(s) 944, 1357
MaeI CTAG 5 cut(s) 582, 936, 1539, 1758, 2003
MaeII ACGT 2 cut(s) 203, 616
MaeIII GTNAC 5 cut(s) 10, 739, 1170, 1266, 1695
MalI GATC 2 cut(s) 976, 1685
MboI GATC 2 cut(s) 974, 1683
MflI RGATCY 1 cut(s) 974
MhlI GDGCHC 1 cut(s) 178
MlyI GAGTC 2 cut(s) 1798, 1873
MmeI TCCRAC 1 cut(s) 750
MslI CAYNNNNRTG 1 cut(s) 2161
MspA1I CMGCKG 3 cut(s) 53, 1120, 1153
MspR9I CCNGG 5 cut(s) 263, 403, 966, 1752, 2070
MvaI CCWGG 5 cut(s) 263, 403, 966, 1752, 2070
MvnI CGCG 1 cut(s) 917
NdeII GATC 2 cut(s) 974, 1683
NheI GCTAGC 1 cut(s) 1757
NlaIII CATG 7 cut(s) 70, 251, 398, 489, 1286, 1663, 1993
NlaIV GGNNCC 5 cut(s) 177, 1290, 1479, 1749, 2011
NmuCI GTSAC 2 cut(s) 739, 1170
NspI RCATGY 3 cut(s) 398, 1663, 1993
NspV TTCGAA 2 cut(s) 2038, 2059
PagI TCATGA 1 cut(s) 1282
PciI ACATGT 2 cut(s) 394, 1659
PfeI GAWTC 8 cut(s) 209, 351, 544, 1088, 1574, 1639, 2056, 2061
PflMI CCANNNNNTGG 1 cut(s) 661
PleI GAGTC 2 cut(s) 1797, 1872
PpsI GAGTC 2 cut(s) 1797, 1872
PscI ACATGT 2 cut(s) 394, 1659
PshBI ATTAAT 1 cut(s) 1185
PsiI TTATAA 2 cut(s) 1332, 1422
Psp6I CCWGG 5 cut(s) 261, 401, 964, 1750, 2068
PspFI CCCAGC 1 cut(s) 2152
PspGI CCWGG 5 cut(s) 261, 401, 964, 1750, 2068
PspN4I GGNNCC 5 cut(s) 177, 1290, 1479, 1749, 2011
PspPI GGNCC 3 cut(s) 1319, 1563, 1935
PstI CTGCAG 3 cut(s) 427, 870, 1621
PstNI CAGNNNCTG 1 cut(s) 212
PsuI RGATCY 1 cut(s) 974
RsaI GTAC 4 cut(s) 418, 856, 1961, 2113
RsaNI GTAC 4 cut(s) 417, 855, 1960, 2112
RseI CAYNNNNRTG 1 cut(s) 2161
Sau3AI GATC 2 cut(s) 974, 1683
Sau96I GGNCC 3 cut(s) 1319, 1563, 1935
ScaI AGTACT 1 cut(s) 418
SchI GAGTC 2 cut(s) 1798, 1873
ScrFI CCNGG 5 cut(s) 263, 403, 966, 1752, 2070
SduI GDGCHC 1 cut(s) 178
SfaNI GCATC 2 cut(s) 944, 1357
SfcI CTRYAG 3 cut(s) 423, 866, 1617
SfuI TTCGAA 2 cut(s) 2038, 2059
SinI GGWCC 1 cut(s) 1319
SmiMI CAYNNNNRTG 1 cut(s) 2161
SmlI CTYRAG 1 cut(s) 1550
SmoI CTYRAG 1 cut(s) 1550
SsiI CCGC 6 cut(s) 51, 917, 1079, 1120, 1153, 1915
SspI AATATT 1 cut(s) 1162
SspMI CTAG 5 cut(s) 582, 936, 1539, 1758, 2003
StyD4I CCNGG 5 cut(s) 261, 401, 964, 1750, 2068
StyI CCWWGG 4 cut(s) 574, 849, 1394, 1794
TaaI ACNGT 3 cut(s) 589, 721, 1954
TaiI ACGT 2 cut(s) 206, 619
TaqI TCGA 6 cut(s) 454, 952, 1014, 1852, 2038, 2059
TatI WGTACW 2 cut(s) 416, 1959
TauI GCSGC 1 cut(s) 1156
TfiI GAWTC 8 cut(s) 209, 351, 544, 1088, 1574, 1639, 2056, 2061
TscAI CASTG 4 cut(s) 682, 870, 1549, 1599
TseFI GTSAC 2 cut(s) 739, 1170
TseI GCWGC 9 cut(s) 41, 53, 334, 422, 1117, 1150, 1224, 1276, 1708
Tsp45I GTSAC 2 cut(s) 739, 1170
TspDTI ATGAA 8 cut(s) 83, 512, 648, 713, 1047, 1353, 1837, 2090
TspRI CASTG 4 cut(s) 682, 870, 1549, 1599
Van91I CCANNNNNTGG 1 cut(s) 661
VpaK11BI GGWCC 1 cut(s) 1319
VspI ATTAAT 1 cut(s) 1185
XagI CCTNNNNNAGG 1 cut(s) 909
XapI RAATTY 5 cut(s) 87, 228, 285, 608, 1231
XceI RCATGY 3 cut(s) 398, 1663, 1993
XcmI CCANNNNNNNNNTGG 1 cut(s) 1249
XspI CTAG 5 cut(s) 582, 936, 1539, 1758, 2003
ZrmI AGTACT 1 cut(s) 418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.