FvH4_3g10372
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000291
Physical Location & Seq
Reverse (-)
6072012 .. 6075217
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10372.t1

Sequence Viewer

Length: 1530 bp
ATGACAGAACGATTTTTGCCGGAGGACTATGAACAGATTCTTTACAGGATGTACCTAGATTGTGTTCAGGGGGCGAAGACTGTAACAGAGTATACCGCTGAGTTTGTGCGTCTTTCTGAGCGCAATGACTTAGGCGAATCTGAAGGGCAGAAGGTTGCTCGGTACATCAGTAGGTTGAGACCTTCCATACAAGAGAAGATTCGCTTGCAAACTATGTGGTATGTGACTGAGGCTGCAAGCTTGGCGATAAAGGCGGAGCTGATGGAGAAGTCCCCTAGGGTTTCTTTTCAATTCCCAAGATTCACTAGTCAGAGGAGTACTGAAGTCAGGAGTTCAATGGGAGATCAAGGAAAAACGGTGTCGCAGAATACAGGTGGAATGGCCACCAGGGCATTTGGTGCTGTTGGCAGTACTAGCAGAGCGACTCGGGCAGCACCTGTGCAGCGACCTTTTAACCCTTATGCAAGGCCTTTTCCAGGAACTTGTTATAAGTGTTTACAGCCTGGTCATAGATCCAACGAGTGTACTGCACCTCCGAAGGTGGTTAACGCAGTTCAGGCTTTGGTCGAGGCTTGTGAGGAAGACGAGACGGAGGAAGGAGGCGATGACTATGAAGGGGCTGAATTTGCAGTGGAAGATTCTCCAGAAAAGGTGAACATTGTATTGCAGAGAATTTTGTTGTCTCCCAAGGAGGAGGACGTGAAGCGTACACATGACCTAACACCATCAATGACAACGCCGATCTCAACAGCGGCGGCGGTGGCTACGACATCAATCCCGGCGACGTCAACCCCATTAGCGTCGATCTCAGCAGCGAGCCGCACATCGACAACTATCACGGCAGCAACAGAGGATGTTACTGCCATCGTCAATTTGGTTGCTCCTTGCGAACCATTTGAGAGACCCTTGGGACTGGATTTTATTGAGGGTGGAGGATCTTTGTCTCTGCCAAAGACCCAATCTCGAACACAGACCTTTGCTTCCATTGTTGGAGGTTCAATTGATACAATTGACCCTACCATCATTTGCCAACTACCAAACCCAGAGGTACACGGTGACATGATCTATGTCAAGATTAGTGACGATTTATATTATGAACAATTGCAGAAATTTCGCACTAATCTCATTGGTAGACTTCTACTTCGTAAAGGATCGGTTCCTATGAGAACTGATTCTCTGAAAGCTTCCATTGCGGCTCAGTGGAACACTACGAACCCATGGCAGTTGGTTCCATTGGGTAAGGGTTTCTTTGACATTCATTTCAATAGTGAAGATGACATGAGAAGAATTTGGAGAAGTGGTACATGTTCTCTCGCTAATGGAATTTTTCGGTTATTCGAATGGAAGCCAGACTTCATACCCGGTGCTAATCTGCCTCAAACACACACCCAAGTGTGGATACGAATTTCTGGATTAAGCCAAGACTATTGGCATCCTCGCCATCTCATGGAGATTGCCCATGGGGTAGGGACACCATTGCAGATAGACAAAGCGACGAGGGAGCGTCAATTTGGTTATCGGGCCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

510

Amino Acids

56.69

Weight (kDa)

6.01

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 370 - 454 2.1e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 489
AatII GACGTC 1 cut(s) 788
AccB7I CCANNNNNTGG 1 cut(s) 1447
AccI GTMKAC 2 cut(s) 92, 1132
AciI CCGC 7 cut(s) 96, 254, 752, 755, 758, 820, 1193
AclWI GGATC 3 cut(s) 507, 943, 1159
AcoI YGGCCR 1 cut(s) 381
AcsI RAATTY 6 cut(s) 623, 672, 1109, 1287, 1323, 1404
AcuI CTGAAG 2 cut(s) 162, 342
AcyI GRCGYC 1 cut(s) 785
AfaI GTAC 8 cut(s) 53, 164, 319, 412, 526, 709, 1050, 1303
AfiI CCNNNNNNNGG 3 cut(s) 476, 1395, 1447
AflIII ACRYGT 1 cut(s) 1304
AgsI TTSAA 4 cut(s) 290, 336, 999, 1264
AhlI ACTAGT 1 cut(s) 305
AjiI CACGTC 1 cut(s) 700
AjnI CCWGG 3 cut(s) 386, 475, 502
AleI CACNNNNGTG 1 cut(s) 1391
AluBI AGCT 3 cut(s) 240, 259, 1184
AluI AGCT 3 cut(s) 240, 259, 1184
Alw26I GTCTC 5 cut(s) 172, 581, 687, 895, 948
AlwI GGATC 3 cut(s) 507, 943, 1159
AlwNI CAGNNNCTG 1 cut(s) 437
Ama87I CYCGRG 1 cut(s) 426
AoxI GGCC 3 cut(s) 381, 467, 1521
ApeKI GCWGC 5 cut(s) 233, 431, 442, 812, 842
ApoI RAATTY 6 cut(s) 623, 672, 1109, 1287, 1323, 1404
ArsI GACNNNNNNTTYG 2 cut(s) 1125, 1157
Asp700I GAANNNNTTC 2 cut(s) 36, 1171
AspA2I CCTAGG 1 cut(s) 275
AspLEI GCGC 1 cut(s) 123
AspS9I GGNCC 1 cut(s) 1521
AsuC2I CCSGG 2 cut(s) 779, 1362
AsuHPI GGTGA 2 cut(s) 664, 1067
AsuII TTCGAA 1 cut(s) 1338
AvaI CYCGRG 1 cut(s) 426
AvrII CCTAGG 1 cut(s) 275
BaeI ACNNNNGTAYC 2 cut(s) 154, 187
BalI TGGCCA 1 cut(s) 383
BbsI GAAGAC 2 cut(s) 83, 588
BbvI GCAGC 5 cut(s) 220, 443, 454, 824, 854
BccI CCATC 5 cut(s) 256, 733, 872, 1028, 1449
BceAI ACGGC 1 cut(s) 855
BcgI CGANNNNNNTGC 4 cut(s) 509, 543, 1094, 1128
BciT130I CCWGG 3 cut(s) 388, 477, 504
BciVI GTATCC 1 cut(s) 1392
BcnI CCSGG 2 cut(s) 779, 1362
BcoDI GTCTC 5 cut(s) 172, 581, 687, 895, 948
BcuI ACTAGT 1 cut(s) 305
BfaI CTAG 4 cut(s) 56, 276, 306, 414
BfuI GTATCC 1 cut(s) 1392
BglI GCCNNNNNGGC 1 cut(s) 389
BisI GCNGC 9 cut(s) 234, 432, 443, 753, 756, 813, 820, 843, 1194
BlnI CCTAGG 1 cut(s) 275
BlsI GCNGC 9 cut(s) 235, 433, 444, 754, 757, 814, 821, 844, 1195
BmcAI AGTACT 2 cut(s) 319, 412
Bme1390I CCNGG 5 cut(s) 388, 477, 504, 779, 1362
BmeT110I CYCGRG 1 cut(s) 426
BmgBI CACGTC 1 cut(s) 700
BmgT120I GGNCC 1 cut(s) 1521
BmiI GGNNCC 2 cut(s) 1158, 1230
BmrFI CCNGG 5 cut(s) 388, 477, 504, 779, 1362
BmsI GCATC 1 cut(s) 1441
BpiI GAAGAC 2 cut(s) 83, 588
BpmI CTGGAG 1 cut(s) 627
Bpu14I TTCGAA 1 cut(s) 1338
BpuMI CCSGG 2 cut(s) 779, 1362
BsaHI GRCGYC 1 cut(s) 785
BsaI GGTCTC 2 cut(s) 172, 895
BsaJI CCNNGG 6 cut(s) 275, 387, 687, 906, 1217, 1459
BsaXI ACNNNNNCTCC 4 cut(s) 517, 547, 1285, 1315
Bsc4I CCNNNNNNNGG 3 cut(s) 476, 1395, 1447
Bse1I ACTGG 1 cut(s) 918
Bse3DI GCAATG 3 cut(s) 130, 1188, 1475
BseBI CCWGG 3 cut(s) 388, 477, 504
BseDI CCNNGG 6 cut(s) 275, 387, 687, 906, 1217, 1459
BseGI GGATG 3 cut(s) 54, 859, 1432
BseLI CCNNNNNNNGG 3 cut(s) 476, 1395, 1447
BseMI GCAATG 3 cut(s) 130, 1188, 1475
BseMII CTCAG 5 cut(s) 90, 108, 219, 822, 1211
BseNI ACTGG 1 cut(s) 918
BseRI GAGGAG 2 cut(s) 328, 707
BseXI GCAGC 5 cut(s) 220, 443, 454, 824, 854
BsgI GTGCAG 2 cut(s) 461, 513
BshFI GGCC 3 cut(s) 383, 469, 1523
BsiHKCI CYCGRG 1 cut(s) 426
BsiSI CCGG 3 cut(s) 20, 779, 1362
BslFI GGGAC 3 cut(s) 256, 924, 1483
BslI CCNNNNNNNGG 3 cut(s) 476, 1395, 1447
BsmAI GTCTC 5 cut(s) 172, 581, 687, 895, 948
BsmBI CGTCTC 1 cut(s) 581
BsmFI GGGAC 3 cut(s) 256, 924, 1483
BsnI GGCC 3 cut(s) 383, 469, 1523
Bso31I GGTCTC 2 cut(s) 172, 895
BsoBI CYCGRG 1 cut(s) 426
Bsp119I TTCGAA 1 cut(s) 1338
Bsp143I GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
Bsp19I CCATGG 2 cut(s) 1217, 1459
BspACI CCGC 7 cut(s) 96, 254, 752, 755, 758, 820, 1193
BspANI GGCC 3 cut(s) 383, 469, 1523
BspCNI CTCAG 5 cut(s) 91, 109, 220, 821, 1210
BspLI GGNNCC 2 cut(s) 1158, 1230
BspPI GGATC 3 cut(s) 507, 943, 1159
BspT104I TTCGAA 1 cut(s) 1338
BspTNI GGTCTC 2 cut(s) 172, 895
BsrDI GCAATG 3 cut(s) 130, 1188, 1475
BsrI ACTGG 1 cut(s) 918
BssECI CCNNGG 6 cut(s) 275, 387, 687, 906, 1217, 1459
BssMI GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
BssNAI GTATAC 1 cut(s) 93
BssNI GRCGYC 1 cut(s) 785
BssT1I CCWWGG 5 cut(s) 275, 687, 906, 1217, 1459
Bst1107I GTATAC 1 cut(s) 93
Bst2UI CCWGG 3 cut(s) 388, 477, 504
Bst4CI ACNGT 3 cut(s) 82, 358, 1055
BstACI GRCGYC 1 cut(s) 785
BstAPI GCANNNNNTGC 1 cut(s) 398
BstBI TTCGAA 1 cut(s) 1338
BstC8I GCNNGC 3 cut(s) 206, 238, 817
BstDEI CTNAG 6 cut(s) 99, 117, 130, 228, 808, 1197
BstDSI CCRYGG 2 cut(s) 1217, 1459
BstENI CCTNNNNNAGG 1 cut(s) 474
BstF5I GGATG 3 cut(s) 54, 859, 1432
BstHHI GCGC 1 cut(s) 123
BstKTI GATC 7 cut(s) 346, 515, 744, 807, 938, 1065, 1154
BstMAI GTCTC 5 cut(s) 172, 581, 687, 895, 948
BstMBI GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
BstNI CCWGG 3 cut(s) 388, 477, 504
BstNSI RCATGY 1 cut(s) 1308
BstSCI CCNGG 5 cut(s) 386, 475, 502, 777, 1360
BstV1I GCAGC 5 cut(s) 220, 443, 454, 824, 854
BstV2I GAAGAC 2 cut(s) 83, 588
BstX2I RGATCY 2 cut(s) 512, 935
BstYI RGATCY 2 cut(s) 512, 935
BstZ17I GTATAC 1 cut(s) 93
BsuI GTATCC 1 cut(s) 1392
BsuRI GGCC 3 cut(s) 383, 469, 1523
BtgI CCRYGG 2 cut(s) 1217, 1459
BtgZI GCGATG 1 cut(s) 618
BtrI CACGTC 1 cut(s) 700
BtsCI GGATG 3 cut(s) 54, 859, 1432
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 2 cut(s) 636, 1205
Cac8I GCNNGC 3 cut(s) 206, 238, 817
CaiI CAGNNNCTG 1 cut(s) 437
CfoI GCGC 1 cut(s) 123
Cfr13I GGNCC 1 cut(s) 1521
CseI GACGC 3 cut(s) 98, 789, 1493
Csp6I GTAC 8 cut(s) 52, 163, 318, 411, 525, 708, 1049, 1302
CspCI CAANNNNNGTGG 2 cut(s) 197, 232
CviAII CATG 7 cut(s) 713, 1060, 1218, 1279, 1305, 1447, 1460
CviQI GTAC 8 cut(s) 52, 163, 318, 411, 525, 708, 1049, 1302
DdeI CTNAG 6 cut(s) 99, 117, 130, 228, 808, 1197
DpnI GATC 7 cut(s) 345, 514, 743, 806, 937, 1064, 1153
DpnII GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
EaeI YGGCCR 1 cut(s) 381
EciI GGCGGA 1 cut(s) 269
Eco130I CCWWGG 5 cut(s) 275, 687, 906, 1217, 1459
Eco147I AGGCCT 1 cut(s) 469
Eco31I GGTCTC 2 cut(s) 172, 895
Eco57I CTGAAG 2 cut(s) 162, 342
Eco88I CYCGRG 1 cut(s) 426
EcoNI CCTNNNNNAGG 1 cut(s) 474
EcoRII CCWGG 3 cut(s) 386, 475, 502
EcoT14I CCWWGG 5 cut(s) 275, 687, 906, 1217, 1459
ErhI CCWWGG 5 cut(s) 275, 687, 906, 1217, 1459
Esp3I CGTCTC 1 cut(s) 581
FaeI CATG 7 cut(s) 716, 1063, 1221, 1282, 1308, 1450, 1463
FalI AAGNNNNNCTT 6 cut(s) 188, 220, 1232, 1264, 1337, 1369
FaqI GGGAC 3 cut(s) 256, 924, 1483
FatI CATG 7 cut(s) 712, 1059, 1217, 1278, 1304, 1446, 1459
FblI GTMKAC 2 cut(s) 92, 1132
Fnu4HI GCNGC 9 cut(s) 234, 432, 443, 753, 756, 813, 820, 843, 1194
FokI GGATG 3 cut(s) 61, 866, 1419
Fsp4HI GCNGC 9 cut(s) 234, 432, 443, 753, 756, 813, 820, 843, 1194
FspBI CTAG 4 cut(s) 56, 276, 306, 414
GlaI GCGC 1 cut(s) 122
GluI GCNGC 9 cut(s) 234, 432, 443, 753, 756, 813, 820, 843, 1194
GsuI CTGGAG 1 cut(s) 627
HaeIII GGCC 3 cut(s) 383, 469, 1523
HapII CCGG 3 cut(s) 20, 779, 1362
HgaI GACGC 3 cut(s) 98, 789, 1493
HhaI GCGC 1 cut(s) 123
Hin1I GRCGYC 1 cut(s) 785
Hin1II CATG 7 cut(s) 716, 1063, 1221, 1282, 1308, 1450, 1463
Hin6I GCGC 1 cut(s) 121
HinP1I GCGC 1 cut(s) 121
HincII GTYRAC 2 cut(s) 547, 789
HindII GTYRAC 2 cut(s) 547, 789
HindIII AAGCTT 2 cut(s) 238, 1182
HinfI GANTC 7 cut(s) 37, 137, 199, 300, 424, 638, 1172
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 3 cut(s) 20, 779, 1362
HphI GGTGA 2 cut(s) 664, 1067
Hpy166II GTNNAC 9 cut(s) 93, 497, 525, 547, 655, 710, 789, 1051, 1133
Hpy188I TCNGA 5 cut(s) 118, 142, 312, 537, 1179
Hpy188III TCNNGA 5 cut(s) 328, 644, 963, 1072, 1410
Hpy8I GTNNAC 9 cut(s) 93, 497, 525, 547, 655, 710, 789, 1051, 1133
Hpy99I CGWCG 3 cut(s) 787, 805, 1498
HpyAV CCTTC 6 cut(s) 137, 145, 192, 532, 590, 608
HpyCH4III ACNGT 3 cut(s) 82, 358, 1055
HpyCH4IV ACGT 2 cut(s) 699, 785
HpyCH4V TGCA 9 cut(s) 208, 236, 442, 464, 530, 629, 667, 1105, 1480
HpyF3I CTNAG 6 cut(s) 99, 117, 130, 228, 808, 1197
HpySE526I ACGT 2 cut(s) 699, 785
Hsp92I GRCGYC 1 cut(s) 785
Hsp92II CATG 7 cut(s) 716, 1063, 1221, 1282, 1308, 1450, 1463
HspAI GCGC 1 cut(s) 121
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
LmnI GCTCC 3 cut(s) 256, 886, 1501
Lsp1109I GCAGC 5 cut(s) 220, 443, 454, 824, 854
LweI GCATC 1 cut(s) 1441
MaeI CTAG 4 cut(s) 56, 276, 306, 414
MaeII ACGT 2 cut(s) 699, 785
MaeIII GTNAC 5 cut(s) 82, 223, 856, 1055, 1079
MalI GATC 7 cut(s) 345, 514, 743, 806, 937, 1064, 1153
MboI GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
MboII GAAGA 6 cut(s) 88, 208, 593, 647, 1283, 1296
MfeI CAATTG 3 cut(s) 999, 1008, 1100
MflI RGATCY 2 cut(s) 512, 935
MlsI TGGCCA 1 cut(s) 383
MluNI TGGCCA 1 cut(s) 383
MlyI GAGTC 1 cut(s) 418
MmeI TCCRAC 2 cut(s) 540, 970
Mox20I TGGCCA 1 cut(s) 383
MroXI GAANNNNTTC 2 cut(s) 36, 1171
MscI TGGCCA 1 cut(s) 383
MseI TTAA 3 cut(s) 453, 546, 1415
MslI CAYNNNNRTG 1 cut(s) 1391
Msp20I TGGCCA 1 cut(s) 383
MspA1I CMGCKG 2 cut(s) 98, 752
MspI CCGG 3 cut(s) 20, 779, 1362
MspR9I CCNGG 5 cut(s) 388, 477, 504, 779, 1362
MunI CAATTG 3 cut(s) 999, 1008, 1100
MvaI CCWGG 3 cut(s) 388, 477, 504
NciI CCSGG 2 cut(s) 779, 1362
NcoI CCATGG 2 cut(s) 1217, 1459
NdeII GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
NlaIII CATG 7 cut(s) 716, 1063, 1221, 1282, 1308, 1450, 1463
NlaIV GGNNCC 2 cut(s) 1158, 1230
NmuCI GTSAC 3 cut(s) 223, 1055, 1079
NspI RCATGY 1 cut(s) 1308
NspV TTCGAA 1 cut(s) 1338
OliI CACNNNNGTG 1 cut(s) 1391
PceI AGGCCT 1 cut(s) 469
PciI ACATGT 1 cut(s) 1304
PdmI GAANNNNTTC 2 cut(s) 36, 1171
PfeI GAWTC 6 cut(s) 37, 137, 199, 300, 638, 1172
PflMI CCANNNNNTGG 1 cut(s) 1447
PfoI TCCNGGA 1 cut(s) 475
PkrI GCNGC 9 cut(s) 235, 433, 444, 754, 757, 814, 821, 844, 1195
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PscI ACATGT 1 cut(s) 1304
PsiI TTATAA 1 cut(s) 489
Psp6I CCWGG 3 cut(s) 386, 475, 502
PspGI CCWGG 3 cut(s) 386, 475, 502
PspN4I GGNNCC 2 cut(s) 1158, 1230
PspPI GGNCC 1 cut(s) 1521
PstNI CAGNNNCTG 1 cut(s) 437
PsuI RGATCY 2 cut(s) 512, 935
RsaI GTAC 8 cut(s) 53, 164, 319, 412, 526, 709, 1050, 1303
RsaNI GTAC 8 cut(s) 52, 163, 318, 411, 525, 708, 1049, 1302
RseI CAYNNNNRTG 1 cut(s) 1391
SaqAI TTAA 3 cut(s) 453, 546, 1415
SatI GCNGC 9 cut(s) 234, 432, 443, 753, 756, 813, 820, 843, 1194
Sau3AI GATC 7 cut(s) 343, 512, 741, 804, 935, 1062, 1151
Sau96I GGNCC 1 cut(s) 1521
ScaI AGTACT 2 cut(s) 319, 412
SchI GAGTC 1 cut(s) 418
ScrFI CCNGG 5 cut(s) 388, 477, 504, 779, 1362
SfaNI GCATC 1 cut(s) 1441
SfuI TTCGAA 1 cut(s) 1338
SmiMI CAYNNNNRTG 1 cut(s) 1391
SpeI ACTAGT 1 cut(s) 305
SseBI AGGCCT 1 cut(s) 469
SsiI CCGC 7 cut(s) 96, 254, 752, 755, 758, 820, 1193
SspMI CTAG 4 cut(s) 56, 276, 306, 414
StuI AGGCCT 1 cut(s) 469
StyD4I CCNGG 5 cut(s) 386, 475, 502, 777, 1360
StyI CCWWGG 5 cut(s) 275, 687, 906, 1217, 1459
TaaI ACNGT 3 cut(s) 82, 358, 1055
TaiI ACGT 2 cut(s) 702, 788
TaqI TCGA 5 cut(s) 567, 803, 827, 964, 1338
TatI WGTACW 3 cut(s) 317, 410, 524
TauI GCSGC 4 cut(s) 755, 758, 822, 1196
TfiI GAWTC 6 cut(s) 37, 137, 199, 300, 638, 1172
Tru1I TTAA 3 cut(s) 453, 546, 1415
Tru9I TTAA 3 cut(s) 453, 546, 1415
TscAI CASTG 2 cut(s) 636, 1205
TseFI GTSAC 3 cut(s) 223, 1055, 1079
TseI GCWGC 5 cut(s) 233, 431, 442, 812, 842
Tsp45I GTSAC 3 cut(s) 223, 1055, 1079
TspDTI ATGAA 5 cut(s) 45, 627, 1110, 1247, 1345
TspGWI ACGGA 1 cut(s) 605
TspRI CASTG 2 cut(s) 636, 1205
Van91I CCANNNNNTGG 1 cut(s) 1447
XagI CCTNNNNNAGG 1 cut(s) 474
XapI RAATTY 6 cut(s) 623, 672, 1109, 1287, 1323, 1404
XceI RCATGY 1 cut(s) 1308
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XmaJI CCTAGG 1 cut(s) 275
XmiI GTMKAC 2 cut(s) 92, 1132
XmnI GAANNNNTTC 2 cut(s) 36, 1171
XspI CTAG 4 cut(s) 56, 276, 306, 414
ZraI GACGTC 1 cut(s) 786
ZrmI AGTACT 2 cut(s) 319, 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.