zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 70, 159, 441 |
| AcsI | RAATTY | 2 cut(s) | 282, 317 |
| AcuI | CTGAAG | 1 cut(s) | 428 |
| AflIII | ACRYGT | 1 cut(s) | 187 |
| AgsI | TTSAA | 2 cut(s) | 37, 314 |
| AluBI | AGCT | 1 cut(s) | 14 |
| AluI | AGCT | 1 cut(s) | 14 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AlwI | GGATC | 3 cut(s) | 70, 159, 441 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 236 |
| Ama87I | CYCGRG | 1 cut(s) | 24 |
| ApeKI | GCWGC | 1 cut(s) | 419 |
| ApoI | RAATTY | 2 cut(s) | 282, 317 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 335, 367 |
| AseI | ATTAAT | 1 cut(s) | 252 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 251 |
| AvaI | CYCGRG | 1 cut(s) | 24 |
| BbvI | GCAGC | 1 cut(s) | 406 |
| BccI | CCATC | 3 cut(s) | 61, 355, 385 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BisI | GCNGC | 1 cut(s) | 420 |
| BlsI | GCNGC | 1 cut(s) | 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 118 |
| BseMII | CTCAG | 3 cut(s) | 56, 77, 309 |
| BseXI | GCAGC | 1 cut(s) | 406 |
| BsgI | GTGCAG | 1 cut(s) | 389 |
| BsiHKCI | CYCGRG | 1 cut(s) | 24 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmBI | CGTCTC | 1 cut(s) | 59 |
| BsoBI | CYCGRG | 1 cut(s) | 24 |
| Bsp143I | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| BspCNI | CTCAG | 3 cut(s) | 55, 76, 308 |
| BspPI | GGATC | 3 cut(s) | 70, 159, 441 |
| BssMI | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| Bst4CI | ACNGT | 2 cut(s) | 87, 146 |
| Bst6I | CTCTTC | 2 cut(s) | 216, 404 |
| BstDEI | CTNAG | 3 cut(s) | 42, 63, 295 |
| BstKTI | GATC | 5 cut(s) | 78, 154, 247, 358, 436 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstMBI | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| BstV1I | GCAGC | 1 cut(s) | 406 |
| BstX2I | RGATCY | 1 cut(s) | 75 |
| BstYI | RGATCY | 1 cut(s) | 75 |
| CaiI | CAGNNNCTG | 1 cut(s) | 236 |
| CviJI | RGCY | 5 cut(s) | 14, 96, 278, 331, 406 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 96, 278, 331, 406 |
| DdeI | CTNAG | 3 cut(s) | 42, 63, 295 |
| DpnI | GATC | 5 cut(s) | 77, 153, 246, 357, 435 |
| DpnII | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| Eam1104I | CTCTTC | 2 cut(s) | 216, 404 |
| EarI | CTCTTC | 2 cut(s) | 216, 404 |
| Eco57I | CTGAAG | 1 cut(s) | 428 |
| Eco88I | CYCGRG | 1 cut(s) | 24 |
| EcoRI | GAATTC | 1 cut(s) | 317 |
| Esp3I | CGTCTC | 1 cut(s) | 59 |
| FaiI | YATR | 1 cut(s) | 427 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 306, 338 |
| Fnu4HI | GCNGC | 1 cut(s) | 420 |
| Fsp4HI | GCNGC | 1 cut(s) | 420 |
| GluI | GCNGC | 1 cut(s) | 420 |
| HincII | GTYRAC | 1 cut(s) | 343 |
| HindII | GTYRAC | 1 cut(s) | 343 |
| HinfI | GANTC | 4 cut(s) | 206, 212, 348, 374 |
| HphI | GGTGA | 2 cut(s) | 17, 251 |
| Hpy166II | GTNNAC | 1 cut(s) | 343 |
| Hpy188I | TCNGA | 9 cut(s) | 45, 66, 80, 211, 217, 249, 262, 306, 360 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 297 |
| Hpy8I | GTNNAC | 1 cut(s) | 343 |
| Hpy99I | CGWCG | 1 cut(s) | 150 |
| HpyAV | CCTTC | 3 cut(s) | 153, 268, 301 |
| HpyCH4III | ACNGT | 2 cut(s) | 87, 146 |
| HpyCH4IV | ACGT | 2 cut(s) | 52, 187 |
| HpyCH4V | TGCA | 1 cut(s) | 370 |
| HpyF3I | CTNAG | 3 cut(s) | 42, 63, 295 |
| HpySE526I | ACGT | 2 cut(s) | 52, 187 |
| Kzo9I | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 5 cut(s) | 222, 282, 317, 356, 388 |
| Lsp1109I | GCAGC | 1 cut(s) | 406 |
| MaeII | ACGT | 2 cut(s) | 52, 187 |
| MaeIII | GTNAC | 2 cut(s) | 5, 239 |
| MalI | GATC | 5 cut(s) | 77, 153, 246, 357, 435 |
| MboI | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| MboII | GAAGA | 5 cut(s) | 233, 326, 343, 400, 421 |
| MfeI | CAATTG | 1 cut(s) | 437 |
| MflI | RGATCY | 1 cut(s) | 75 |
| MluCI | AATT | 4 cut(s) | 282, 309, 317, 437 |
| MlyI | GAGTC | 1 cut(s) | 383 |
| MmeI | TCCRAC | 2 cut(s) | 103, 311 |
| MnlI | CCTC | 2 cut(s) | 149, 211 |
| MseI | TTAA | 1 cut(s) | 252 |
| MslI | CAYNNNNRTG | 1 cut(s) | 172 |
| MunI | CAATTG | 1 cut(s) | 437 |
| NdeII | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| NmuCI | GTSAC | 2 cut(s) | 5, 239 |
| PfeI | GAWTC | 3 cut(s) | 206, 212, 348 |
| PkrI | GCNGC | 1 cut(s) | 421 |
| PleI | GAGTC | 1 cut(s) | 382 |
| PpsI | GAGTC | 1 cut(s) | 382 |
| PshBI | ATTAAT | 1 cut(s) | 252 |
| PstNI | CAGNNNCTG | 1 cut(s) | 236 |
| PsuI | RGATCY | 1 cut(s) | 75 |
| RseI | CAYNNNNRTG | 1 cut(s) | 172 |
| SaqAI | TTAA | 1 cut(s) | 252 |
| SatI | GCNGC | 1 cut(s) | 420 |
| Sau3AI | GATC | 5 cut(s) | 75, 151, 244, 355, 433 |
| SchI | GAGTC | 1 cut(s) | 383 |
| SetI | ASST | 5 cut(s) | 16, 55, 141, 190, 293 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 172 |
| SmlI | CTYRAG | 1 cut(s) | 97 |
| SmoI | CTYRAG | 1 cut(s) | 97 |
| Sse9I | AATT | 4 cut(s) | 282, 309, 317, 437 |
| TaaI | ACNGT | 2 cut(s) | 87, 146 |
| TaiI | ACGT | 2 cut(s) | 55, 190 |
| TaqI | TCGA | 1 cut(s) | 354 |
| TasI | AATT | 4 cut(s) | 282, 309, 317, 437 |
| TfiI | GAWTC | 3 cut(s) | 206, 212, 348 |
| Tru1I | TTAA | 1 cut(s) | 252 |
| Tru9I | TTAA | 1 cut(s) | 252 |
| TseFI | GTSAC | 2 cut(s) | 5, 239 |
| TseI | GCWGC | 1 cut(s) | 419 |
| Tsp45I | GTSAC | 2 cut(s) | 5, 239 |
| TspDTI | ATGAA | 3 cut(s) | 63, 219, 287 |
| VspI | ATTAAT | 1 cut(s) | 252 |
| XapI | RAATTY | 2 cut(s) | 282, 317 |