FvH4_5g39371

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000291
Physical Location & Seq
Forward (+)
29082244 .. 29085514
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g39371.t1

Sequence Viewer

Length: 1425 bp
ATGACAGAACGATTCCTGTCGGAGGACTATGAACAGATTCTTTATAGGATGTACCTAGATTGTTTTCAAGGGGCGAAGACTGTAACAGAGTATACCGCTGAGTTTGTGCGTCTTTCTGAGCGCAATGACTTAGGCGAATCTGAAGGGCAGAAGGTTGCTCAGTACATCAGTGGGTTGAGACCTTCCATACAAGAGAAGATTGGCTTGCAAACTATGTGGTCTGTGACTGAGGCTGTAAGTTTGGCGATAAAAGCGGAGCTGATGGAGAAGTCCCCTAGGGTTTCTTTTCAGTTTCTAAGATTCACTAGTCCGAGGAGTACTGAAGTCGGGAGTTCTGTGGGAGATAAAGGGAAAACGGTGTCGCAGAATACGGGTGGAATGACCACGAGGGCATCCAGTGCTGTTAACAAAGAGGGTGGCGTTTCTGGTTTTGGCAGAGAGGATGGAATTCAGGTGGATGAGAAGATTCGTGCCATACGAGACTGGCCAGCCCCAAAGACAGTTTCTGAGGTGGAGTGTGATGCTAGTGGAGTGGGGGTTGGTGTTGTGTTGTCCCAAGAGAAGAGGCCAGTAGCTTTCTTCAGTGAAAAGCTTAGCGAAGCTCGCCAGAAGTGGAGTACTTACGACCAGGAGTTCTATGCGGTCTTCCAGGCGTTAAAACAGTGGGAACATTACCTTGTTCAGAGGGAGTTTGTCTTGTATACGGACCATCAAGCCTTGAAGTTCCTTAACAGTCAGAAAAATGTAGGCAACATGCATGCTCGGTGGGTGAGTTATCTGCAAAGGTTCCCTTTTGTGATTCAACATAAATCTGGTGCCCAAAACAGGGTGGCAGACGCTTTGAGTAGAAGAGCATCCTTGATGGTGACTTTGTCACAGGATATAGTGGGTTTCGACATGCTCAAGAATTTGTATGCAGAGGATGTTGACTTCAAGGAGATTTGGGCCAAATGCAATGGCAACCATACAGTTGCGGACTATTACATTAGTGATGGTTATTTGTTCAAGGGTAATCAGCTTTGTGTTCCAGTTTCTTCATTGAGGGAGATGTTGATCAAAGACTTGCATGGTGGGGATTTGAGTGAGCATTTGGGCCAAGATAAAACTGTTGCCAGCTTGGAGGAGCGGTATTTTTGGCCCCATTTGAGGAGAGATGCCTCGGCAATTGTCCGAAAGTGTTATGTTTGTCAGGTTTCTAAAGGTCAGTCTCAAAATACTGGTCTTTATACACCTTTACCTGTTCCTGAAGACATTTGGCAGGATCTTTCAATGGATTTTGTGCTGGGTTTGCCTCATACACAGAGGGGAGTGTCTGAATTTGTGGTTGTTGACAAGTTTTCTAAGATGACGCACTTCATTGCTTGGATTCAAAATTCCTTAGTCATTTCTGGGTCACTTTGTGGCGGATGTTTGAGACAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-CCHC zf-H2C2

Protein Analysis

475

Amino Acids

53.61

Weight (kDa)

6.4

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RT_RNaseH_2 PF17919 163 - 232 3.8e-18 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 170 - 263 2.1e-30 RNase H-like domain found in reverse transcriptase
Integrase_H2C2 PF17921 345 - 400 1.2e-15 Integrase zinc binding domain
zf-H2C2 PF09337 362 - 397 9.5e-07 H2C2 zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 815
AccBSI CCGCTC 1 cut(s) 1126
AccI GTMKAC 2 cut(s) 92, 701
AciI CCGC 6 cut(s) 96, 254, 641, 974, 1126, 1404
AclWI GGATC 1 cut(s) 1269
AcoI YGGCCR 1 cut(s) 485
AcsI RAATTY 4 cut(s) 447, 907, 1316, 1372
AcuI CTGAAG 4 cut(s) 162, 342, 565, 1266
AdeI CACNNNGTG 1 cut(s) 1400
AfaI GTAC 4 cut(s) 53, 164, 319, 619
AfiI CCNNNNNNNGG 4 cut(s) 22, 825, 826, 1146
AgsI TTSAA 7 cut(s) 68, 721, 803, 934, 1006, 1269, 1370
AhlI ACTAGT 1 cut(s) 305
AjnI CCWGG 2 cut(s) 627, 648
AjuI GAANNNNNNNTTGG 2 cut(s) 487, 519
AluBI AGCT 7 cut(s) 259, 575, 592, 602, 1018, 1116, 1420
AluI AGCT 7 cut(s) 259, 575, 592, 602, 1018, 1116, 1420
Alw26I GTCTC 4 cut(s) 172, 474, 1212, 1408
AlwI GGATC 1 cut(s) 1269
AlwNI CAGNNNCTG 1 cut(s) 506
AoxI GGCC 5 cut(s) 485, 566, 945, 1093, 1136
ApoI RAATTY 4 cut(s) 447, 907, 1316, 1372
ArsI GACNNNNNNTTYG 2 cut(s) 1204, 1236
Asp700I GAANNNNTTC 1 cut(s) 36
AspA2I CCTAGG 1 cut(s) 275
AspLEI GCGC 1 cut(s) 123
AspS9I GGNCC 4 cut(s) 706, 945, 1093, 1137
AsuHPI GGTGA 2 cut(s) 781, 877
AvaII GGWCC 1 cut(s) 706
AvrII CCTAGG 1 cut(s) 275
BaeGI GKGCMC 1 cut(s) 820
BalI TGGCCA 1 cut(s) 487
BanI GGYRCC 1 cut(s) 815
BauI CACGAG 1 cut(s) 385
BbsI GAAGAC 3 cut(s) 83, 637, 1254
BccI CCATC 5 cut(s) 256, 437, 717, 856, 986
BciT130I CCWGG 2 cut(s) 629, 650
BclI TGATCA 1 cut(s) 1053
BcoDI GTCTC 4 cut(s) 172, 474, 1212, 1408
BcuI ACTAGT 1 cut(s) 305
BfaI CTAG 4 cut(s) 56, 276, 306, 525
BlnI CCTAGG 1 cut(s) 275
BlpI GCTNAGC 1 cut(s) 593
BmcAI AGTACT 2 cut(s) 319, 619
Bme1390I CCNGG 2 cut(s) 629, 650
Bme18I GGWCC 1 cut(s) 706
BmgT120I GGNCC 4 cut(s) 706, 945, 1093, 1137
BmiI GGNNCC 3 cut(s) 788, 817, 1139
BmrFI CCNGG 2 cut(s) 629, 650
BmsI GCATC 4 cut(s) 401, 511, 863, 1144
BpiI GAAGAC 3 cut(s) 83, 637, 1254
Bpu1102I GCTNAGC 1 cut(s) 593
BpuEI CTTGAG 1 cut(s) 887
BsaBI GATNNNNATC 1 cut(s) 1052
BsaI GGTCTC 1 cut(s) 172
BsaJI CCNNGG 3 cut(s) 275, 311, 1158
BsaXI ACNNNNNCTCC 4 cut(s) 522, 552, 1112, 1142
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 825, 826, 1146
Bse1I ACTGG 5 cut(s) 396, 488, 569, 1028, 1222
Bse3DI GCAATG 3 cut(s) 130, 961, 1356
Bse8I GATNNNNATC 1 cut(s) 1052
BseBI CCWGG 2 cut(s) 629, 650
BseDI CCNNGG 3 cut(s) 275, 311, 1158
BseGI GGATG 7 cut(s) 54, 392, 448, 463, 854, 928, 1412
BseJI GATNNNNATC 1 cut(s) 1052
BseLI CCNNNNNNNGG 4 cut(s) 22, 825, 826, 1146
BseMI GCAATG 3 cut(s) 130, 961, 1356
BseMII CTCAG 5 cut(s) 90, 108, 173, 219, 498
BseNI ACTGG 5 cut(s) 396, 488, 569, 1028, 1222
BseRI GAGGAG 3 cut(s) 328, 1136, 1162
BseSI GKGCMC 1 cut(s) 820
BseYI CCCAGC 1 cut(s) 1282
BshFI GGCC 5 cut(s) 487, 568, 947, 1095, 1138
BshNI GGYRCC 1 cut(s) 815
BslFI GGGAC 2 cut(s) 256, 538
BslI CCNNNNNNNGG 4 cut(s) 22, 825, 826, 1146
BsmAI GTCTC 4 cut(s) 172, 474, 1212, 1408
BsmFI GGGAC 2 cut(s) 256, 538
BsnI GGCC 5 cut(s) 487, 568, 947, 1095, 1138
Bso31I GGTCTC 1 cut(s) 172
Bsp1286I GDGCHC 1 cut(s) 820
Bsp143I GATC 2 cut(s) 1053, 1261
Bsp1720I GCTNAGC 1 cut(s) 593
BspACI CCGC 6 cut(s) 96, 254, 641, 974, 1126, 1404
BspANI GGCC 5 cut(s) 487, 568, 947, 1095, 1138
BspCNI CTCAG 5 cut(s) 91, 109, 172, 220, 499
BspLI GGNNCC 3 cut(s) 788, 817, 1139
BspPI GGATC 1 cut(s) 1269
BspQI GCTCTTC 1 cut(s) 844
BspT107I GGYRCC 1 cut(s) 815
BspTNI GGTCTC 1 cut(s) 172
BsrBI CCGCTC 1 cut(s) 1126
BsrDI GCAATG 3 cut(s) 130, 961, 1356
BsrI ACTGG 5 cut(s) 396, 488, 569, 1028, 1222
BssECI CCNNGG 3 cut(s) 275, 311, 1158
BssMI GATC 2 cut(s) 1053, 1261
BssNAI GTATAC 2 cut(s) 93, 702
BssSI CACGAG 1 cut(s) 385
BssT1I CCWWGG 1 cut(s) 275
Bst1107I GTATAC 2 cut(s) 93, 702
Bst2BI CACGAG 1 cut(s) 385
Bst2UI CCWGG 2 cut(s) 629, 650
Bst4CI ACNGT 7 cut(s) 82, 358, 502, 663, 734, 970, 1108
Bst6I CTCTTC 2 cut(s) 557, 844
BstAPI GCANNNNNTGC 1 cut(s) 398
BstC8I GCNNGC 5 cut(s) 206, 489, 604, 759, 1114
BstENI CCTNNNNNAGG 1 cut(s) 20
BstF5I GGATG 7 cut(s) 54, 392, 448, 463, 854, 928, 1412
BstHHI GCGC 1 cut(s) 123
BstKTI GATC 2 cut(s) 1056, 1264
BstMAI GTCTC 4 cut(s) 172, 474, 1212, 1408
BstMBI GATC 2 cut(s) 1053, 1261
BstMWI GCNNNNNNNGC 4 cut(s) 251, 398, 603, 1288
BstNI CCWGG 2 cut(s) 629, 650
BstNSI RCATGY 3 cut(s) 757, 761, 901
BstSCI CCNGG 2 cut(s) 627, 648
BstSLI GKGCMC 1 cut(s) 820
BstV2I GAAGAC 3 cut(s) 83, 637, 1254
BstX2I RGATCY 1 cut(s) 1261
BstYI RGATCY 1 cut(s) 1261
BstZ17I GTATAC 2 cut(s) 93, 702
BsuRI GGCC 5 cut(s) 487, 568, 947, 1095, 1138
BtsCI GGATG 7 cut(s) 54, 392, 448, 463, 854, 928, 1412
BtsIMutI CAGTG 4 cut(s) 175, 403, 589, 668
Cac8I GCNNGC 5 cut(s) 206, 489, 604, 759, 1114
CaiI CAGNNNCTG 1 cut(s) 506
CfoI GCGC 1 cut(s) 123
Cfr13I GGNCC 4 cut(s) 706, 945, 1093, 1137
CseI GACGC 3 cut(s) 98, 845, 1357
Csp6I GTAC 4 cut(s) 52, 163, 318, 618
CspCI CAANNNNNGTGG 4 cut(s) 197, 232, 397, 432
CviAII CATG 4 cut(s) 754, 758, 898, 1067
CviQI GTAC 4 cut(s) 52, 163, 318, 618
DpnI GATC 2 cut(s) 1055, 1263
DpnII GATC 2 cut(s) 1053, 1261
DraIII CACNNNGTG 1 cut(s) 1400
EaeI YGGCCR 1 cut(s) 485
Eam1104I CTCTTC 2 cut(s) 557, 844
EarI CTCTTC 2 cut(s) 557, 844
EciI GGCGGA 1 cut(s) 1419
Eco130I CCWWGG 1 cut(s) 275
Eco31I GGTCTC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 706
Eco57I CTGAAG 4 cut(s) 162, 342, 565, 1266
EcoNI CCTNNNNNAGG 1 cut(s) 20
EcoRI GAATTC 1 cut(s) 447
EcoRII CCWGG 2 cut(s) 627, 648
EcoT14I CCWWGG 1 cut(s) 275
EcoT22I ATGCAT 1 cut(s) 759
ErhI CCWWGG 1 cut(s) 275
FaeI CATG 4 cut(s) 757, 761, 901, 1070
FalI AAGNNNNNCTT 4 cut(s) 188, 220, 775, 807
FaqI GGGAC 2 cut(s) 256, 538
FatI CATG 4 cut(s) 753, 757, 897, 1066
FbaI TGATCA 1 cut(s) 1053
FblI GTMKAC 2 cut(s) 92, 701
FokI GGATG 7 cut(s) 61, 379, 455, 470, 841, 935, 1419
FspBI CTAG 4 cut(s) 56, 276, 306, 525
GlaI GCGC 1 cut(s) 122
GsaI CCCAGC 1 cut(s) 1286
HaeIII GGCC 5 cut(s) 487, 568, 947, 1095, 1138
HgaI GACGC 3 cut(s) 98, 845, 1357
HhaI GCGC 1 cut(s) 123
Hin1II CATG 4 cut(s) 757, 761, 901, 1070
Hin6I GCGC 1 cut(s) 121
HinP1I GCGC 1 cut(s) 121
HincII GTYRAC 3 cut(s) 406, 928, 1330
HindII GTYRAC 3 cut(s) 406, 928, 1330
HindIII AAGCTT 1 cut(s) 590
HinfI GANTC 7 cut(s) 12, 37, 137, 300, 466, 799, 1366
HpaI GTTAAC 1 cut(s) 406
HphI GGTGA 2 cut(s) 781, 877
Hpy166II GTNNAC 5 cut(s) 93, 406, 702, 928, 1330
Hpy188I TCNGA 9 cut(s) 22, 118, 142, 312, 508, 684, 738, 1172, 1315
Hpy188III TCNNGA 3 cut(s) 328, 904, 1244
Hpy8I GTNNAC 5 cut(s) 93, 406, 702, 928, 1330
HpyAV CCTTC 3 cut(s) 137, 145, 192
HpyCH4III ACNGT 7 cut(s) 82, 358, 502, 663, 734, 970, 1108
HpyCH4V TGCA 6 cut(s) 208, 757, 781, 917, 954, 1066
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 398, 603, 1288
Hsp92II CATG 4 cut(s) 757, 761, 901, 1070
HspAI GCGC 1 cut(s) 121
Ksp22I TGATCA 1 cut(s) 1053
KspAI GTTAAC 1 cut(s) 406
Kzo9I GATC 2 cut(s) 1053, 1261
LguI GCTCTTC 1 cut(s) 844
LmnI GCTCC 2 cut(s) 256, 1123
LweI GCATC 4 cut(s) 401, 511, 863, 1144
MaeI CTAG 4 cut(s) 56, 276, 306, 525
MaeIII GTNAC 5 cut(s) 82, 223, 865, 873, 1392
MalI GATC 2 cut(s) 1055, 1263
MbiI CCGCTC 1 cut(s) 1126
MboI GATC 2 cut(s) 1053, 1261
MboII GAAGA 9 cut(s) 88, 208, 475, 571, 574, 637, 861, 1026, 1259
MfeI CAATTG 1 cut(s) 1164
MflI RGATCY 1 cut(s) 1261
MhlI GDGCHC 1 cut(s) 820
MlsI TGGCCA 1 cut(s) 487
MluCI AATT 5 cut(s) 447, 907, 1164, 1316, 1372
MluNI TGGCCA 1 cut(s) 487
Mox20I TGGCCA 1 cut(s) 487
Mph1103I ATGCAT 1 cut(s) 759
MroXI GAANNNNTTC 1 cut(s) 36
MscI TGGCCA 1 cut(s) 487
MseI TTAA 3 cut(s) 405, 656, 729
Msp20I TGGCCA 1 cut(s) 487
MspA1I CMGCKG 1 cut(s) 98
MspR9I CCNGG 2 cut(s) 629, 650
MunI CAATTG 1 cut(s) 1164
MvaI CCWGG 2 cut(s) 629, 650
MwoI GCNNNNNNNGC 4 cut(s) 251, 398, 603, 1288
NdeII GATC 2 cut(s) 1053, 1261
NlaIII CATG 4 cut(s) 757, 761, 901, 1070
NlaIV GGNNCC 3 cut(s) 788, 817, 1139
NmeAIII GCCGAG 1 cut(s) 1139
NmuCI GTSAC 4 cut(s) 223, 865, 873, 1392
NsiI ATGCAT 1 cut(s) 759
NspI RCATGY 3 cut(s) 757, 761, 901
PaeI GCATGC 1 cut(s) 761
PciSI GCTCTTC 1 cut(s) 844
PcsI WCGNNNNNNNCGW 1 cut(s) 475
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 7 cut(s) 12, 37, 137, 300, 466, 799, 1366
PflFI GACNNNGTC 1 cut(s) 871
Psp6I CCWGG 2 cut(s) 627, 648
PspFI CCCAGC 1 cut(s) 1282
PspGI CCWGG 2 cut(s) 627, 648
PspN4I GGNNCC 3 cut(s) 788, 817, 1139
PspPI GGNCC 4 cut(s) 706, 945, 1093, 1137
PstNI CAGNNNCTG 1 cut(s) 506
PsuI RGATCY 1 cut(s) 1261
PsyI GACNNNGTC 1 cut(s) 871
RsaI GTAC 4 cut(s) 53, 164, 319, 619
RsaNI GTAC 4 cut(s) 52, 163, 318, 618
SapI GCTCTTC 1 cut(s) 844
SaqAI TTAA 3 cut(s) 405, 656, 729
Sau3AI GATC 2 cut(s) 1053, 1261
Sau96I GGNCC 4 cut(s) 706, 945, 1093, 1137
ScaI AGTACT 2 cut(s) 319, 619
ScrFI CCNGG 2 cut(s) 629, 650
SduI GDGCHC 1 cut(s) 820
SfaNI GCATC 4 cut(s) 401, 511, 863, 1144
SinI GGWCC 1 cut(s) 706
SmlI CTYRAG 1 cut(s) 902
SmoI CTYRAG 1 cut(s) 902
SpeI ACTAGT 1 cut(s) 305
SphI GCATGC 1 cut(s) 761
Sse9I AATT 5 cut(s) 447, 907, 1164, 1316, 1372
SsiI CCGC 6 cut(s) 96, 254, 641, 974, 1126, 1404
SspMI CTAG 4 cut(s) 56, 276, 306, 525
StyD4I CCNGG 2 cut(s) 627, 648
StyI CCWWGG 1 cut(s) 275
TaaI ACNGT 7 cut(s) 82, 358, 502, 663, 734, 970, 1108
TaqI TCGA 1 cut(s) 894
TasI AATT 5 cut(s) 447, 907, 1164, 1316, 1372
TatI WGTACW 3 cut(s) 162, 317, 617
TfiI GAWTC 7 cut(s) 12, 37, 137, 300, 466, 799, 1366
Tru1I TTAA 3 cut(s) 405, 656, 729
Tru9I TTAA 3 cut(s) 405, 656, 729
TscAI CASTG 4 cut(s) 175, 403, 589, 668
TseFI GTSAC 4 cut(s) 223, 865, 873, 1392
Tsp45I GTSAC 4 cut(s) 223, 865, 873, 1392
TspDTI ATGAA 3 cut(s) 45, 1026, 1345
TspGWI ACGGA 1 cut(s) 719
TspRI CASTG 4 cut(s) 175, 403, 589, 668
Tth111I GACNNNGTC 1 cut(s) 871
VpaK11BI GGWCC 1 cut(s) 706
XagI CCTNNNNNAGG 1 cut(s) 20
XapI RAATTY 4 cut(s) 447, 907, 1316, 1372
XceI RCATGY 3 cut(s) 757, 761, 901
XmaJI CCTAGG 1 cut(s) 275
XmiI GTMKAC 2 cut(s) 92, 701
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 4 cut(s) 56, 276, 306, 525
ZrmI AGTACT 2 cut(s) 319, 619
Zsp2I ATGCAT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.