FvH4_1g23712

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000291
Physical Location & Seq
Reverse (-)
15569138 .. 15570613
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g23712.t1

Sequence Viewer

Length: 1185 bp
ATGGGAAGAATCAAGGAGGGACTATCCCATGACTCTCAAGCCAAGAACTTGGTGGAGCTTGTCAAGAGTGGAACGACAAGGCGATTTTGGCTTGAGGACGAGTTGCTTTACACAACGGGGAAGCGGCTTTATGTTCCAAAATGGGACAACTTGAGGAGGGAGATATTGAAGGAATGCCACGACTCAAAGTGGGCGGGACACCCCGGCACTCATCGCACGTTGGCATTGCTTAGCGACACCTACTATTGGCCACATATGCGGGACGATGTCGATACATATGTGAAGACTTGCCTTGTGTGCCAACAAGACAAGGTGGAGCAAAAGCATCCGGGAGGGTTGTTGGAACCCCTTCCCATTCCATCAAGACCGTGGGAAAGTTTAAGTATGGACTTCATCACCAATCTACCCAAGTCCGATGGTTATGGATCCATCTTCGTTGTGGTAGATCAATTCACCAAGTATGCCACATTCATCCCCGCACCCGTGGAGTGTACCGCGGAGTCGACGGGTGTAAGTCCGTTTGAGCTAGCAACCGGACAACAACCCTTAACTCCAAGCACATTGGTGACCGGCTACACGGGAAGTAGCCCCGTTGCATATAAAACAGCCAAGGAGTGGCAGCAAGCCAATGAGCTCGCTCGTTCGCAACTAGAGAAGGCTTCAAAGAAGATGAAGAAGTATGCGGACCGGCAAAGGCGACACTTGGAGTTCCAAACCGGGGACTTAGTGTTCGTGAAGGTTATTCTAACACAACACAAGGCAAACAAGGGACTTCACAAGAGTTTGCTACAGAAGTATAAAGGTCCCTTTCCGATCCTTAAGAAGGTAGGCAAAGCGGCATATCTAGTGGAACTACCTTCTAACACCAAGCTTCATCCGGTGTTTCATGTGAGTCACTTGAAGCCTTATCATGAAGATGCCGAAGCACCCGAACGAGGTAAGTCTCATCGAGCTCCCGCTTATATGATCACTTCATTTGACAAAGAAGTGGATAGCATTGAGGCCAAGCGCGAGGTGCGGAAGAAGCGGATACCAAGGTATATCGAATACTTTGTCAAATGGAAGGGGCTGCCCGCGTCCGAGGCTAGTTGGGAGAAAGAGGAGTCCTTGTGGCAATTCAAGGACAAGATTGCCGAGTTCGAGCAAGAGGAGCTCGCAAGGGCGACGAGGACGTCGCCGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_protease_2 Chromo RVP_2 RVT_1 Retrotrans_gag gag-asp_proteas rve

Protein Analysis

395

Amino Acids

45.23

Weight (kDa)

9.19

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Integrase_H2C2 PF17921 50 - 104 2.7e-23 Integrase zinc binding domain
SH3_Tf2-1 PF24626 240 - 304 3.5e-17 Tf2-1-like, SH3 domain
Chromo PF00385 329 - 382 2.2e-10 Chromo (CHRromatin Organisation MOdifier) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000291)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00860
fragaria_vesca FvH4_1g23712 FvH4_1g29809 FvH4_1g29810 FvH4_2g02661 FvH4_2g13451 FvH4_2g17921 FvH4_2g17922 FvH4_2g19251 FvH4_2g19252 FvH4_2g28221 FvH4_2g35961 FvH4_3g10372 FvH4_3g12461 FvH4_3g12461 FvH4_3g27861 FvH4_3g34591 FvH4_3g40201 FvH4_3g44612 FvH4_4g08352 FvH4_4g12251 FvH4_4g12742 FvH4_4g13904 FvH4_4g14287 FvH4_4g15243 FvH4_4g24071 FvH4_4g33448 FvH4_5g21912 FvH4_5g39371 FvH4_6g14992 FvH4_6g15221 FvH4_6g20603 FvH4_6g31093 FvH4_6g32372 FvH4_6g33012
malus_domestica MD11G1009100.v1.1 MD13G1145000.v1.1 MD16G1138700.v1.1
prunus_persica Prupe.5G246300_v2.0.a1 Prupe.7G034800_v2.0.a1 Prupe.8G084500_v2.0.a1
pyrus_communis pycom01g18240 pycom04g00330 pycom05g09010 pycom06g01670 pycom06g01690 pycom06g07180 pycom06g11620 pycom10g05720 pycom1134g00040 pycom1134g00060 pycom12486g00010 pycom12555g00230 pycom13g21670 pycom13g23130 pycom13g23140 pycom14g10580
rosa_chinensis RchiOBHm_Chr1g0330691 RchiOBHm_Chr2g0106171 RchiOBHm_Chr2g0134731 RchiOBHm_Chr2g0142791 RchiOBHm_Chr2g0149861 RchiOBHm_Chr3g0452401 RchiOBHm_Chr3g0461881 RchiOBHm_Chr4g0401341 RchiOBHm_Chr5g0075641 RchiOBHm_Chr6g0265961 RchiOBHm_Chr7g0200201 RchiOBHm_Chr7g0237811
rosa_laevigata RLG00000002773
rosa_multiflora Rmu_co8037806.1_g000001 Rmu_co8445989.1_g000001 Rmu_sc0000745.1_g000039 Rmu_sc0004448.1_g000029 Rmu_sc0004488.1_g000002 Rmu_sc0004591.1_g000018 Rmu_sc0005065.1_g000030 Rmu_sc0005150.1_g000005 Rmu_sc0005654.1_g000011 Rmu_sc0006986.1_g000016
rosa_roxburghii Rroxscaffold_164G00436490 Rroxscaffold_175G00432490 Rroxscaffold_1G00059440 Rroxscaffold_1G00064410 Rroxscaffold_2G00100310 Rroxscaffold_2G00128170 Rroxscaffold_3G00239420 Rroxscaffold_3G00264970 Rroxscaffold_3G00271550 Rroxscaffold_4G00300240 Rroxscaffold_5G00385050 Rroxscaffold_6G00399720
rosa_rugosa Rorug02G0252200
rosa_samantha Rh2DG251900 Rh7CG329900
rosa_wichuraiana Rw0G004800 Rw1G000850 Rw1G022350 Rw2G027030 Rw2G027760 Rw2G028410 Rw2G029130 Rw2G029390 Rw2G032490 Rw2G039460 Rw2G047800 Rw2G050340 Rw3G026430 Rw4G018370 Rw4G030750 Rw4G033140 Rw5G011950 Rw5G012010 Rw5G029280 Rw5G040190 Rw5G044570 Rw5G048240 Rw6G000340 Rw6G010140 Rw6G026480 Rw7G033750 Rw7G037250 Rw7G042080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1171
AatII GACGTC 1 cut(s) 1175
AccB7I CCANNNNNTGG 1 cut(s) 615
AccI GTMKAC 1 cut(s) 503
AccII CGCG 3 cut(s) 497, 1011, 1076
AclWI GGATC 3 cut(s) 420, 433, 808
AcoI YGGCCR 1 cut(s) 248
AcyI GRCGYC 1 cut(s) 1172
AfaI GTAC 1 cut(s) 493
AfiI CCNNNNNNNGG 5 cut(s) 246, 615, 718, 823, 935
AflII CTTAAG 1 cut(s) 818
AgsI TTSAA 4 cut(s) 169, 663, 901, 1120
AleI CACNNNNGTG 1 cut(s) 563
AloI GAACNNNNNNTCC 2 cut(s) 713, 745
AluBI AGCT 6 cut(s) 58, 526, 634, 871, 953, 1153
AluI AGCT 6 cut(s) 58, 526, 634, 871, 953, 1153
Alw21I GWGCWC 3 cut(s) 636, 955, 1155
Alw26I GTCTC 1 cut(s) 948
AlwI GGATC 3 cut(s) 420, 433, 808
AoxI GGCC 2 cut(s) 248, 1002
ApeKI GCWGC 2 cut(s) 619, 1069
ArsI GACNNNNNNTTYG 4 cut(s) 713, 745, 1038, 1070
Asp700I GAANNNNTTC 1 cut(s) 348
AspLEI GCGC 1 cut(s) 1011
AspS9I GGNCC 2 cut(s) 685, 803
AsuC2I CCSGG 3 cut(s) 204, 330, 718
AsuHPI GGTGA 3 cut(s) 388, 445, 577
AsuNHI GCTAGC 1 cut(s) 526
AvaII GGWCC 2 cut(s) 685, 803
BaeI ACNNNNGTAYC 4 cut(s) 264, 297, 1022, 1055
BalI TGGCCA 1 cut(s) 250
BamHI GGATCC 1 cut(s) 425
BanII GRGCYC 3 cut(s) 636, 955, 1155
BbsI GAAGAC 1 cut(s) 290
Bbv12I GWGCWC 3 cut(s) 636, 955, 1155
BbvI GCAGC 2 cut(s) 631, 1056
BccI CCATC 3 cut(s) 367, 410, 437
BciVI GTATCC 1 cut(s) 1023
BclI TGATCA 1 cut(s) 966
BcnI CCSGG 3 cut(s) 204, 330, 718
BcoDI GTCTC 1 cut(s) 948
BfaI CTAG 4 cut(s) 527, 650, 845, 1086
BfmI CTRYAG 1 cut(s) 788
BfrI CTTAAG 1 cut(s) 818
BfuI GTATCC 1 cut(s) 1023
BisI GCNGC 4 cut(s) 125, 620, 837, 1070
BlpI GCTNAGC 1 cut(s) 230
BlsI GCNGC 4 cut(s) 126, 621, 838, 1071
Bme1390I CCNGG 3 cut(s) 204, 330, 718
Bme18I GGWCC 2 cut(s) 685, 803
BmgT120I GGNCC 2 cut(s) 685, 803
BmiI GGNNCC 3 cut(s) 345, 427, 805
BmrFI CCNGG 3 cut(s) 204, 330, 718
BmsI GCATC 2 cut(s) 334, 907
BmtI GCTAGC 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 290
Bpu1102I GCTNAGC 1 cut(s) 230
BpuEI CTTGAG 3 cut(s) 21, 113, 172
BpuMI CCSGG 3 cut(s) 204, 330, 718
BsaHI GRCGYC 1 cut(s) 1172
BsaJI CCNNGG 8 cut(s) 202, 368, 483, 495, 609, 717, 1034, 1080
BsaWI WCCGGW 2 cut(s) 533, 877
BsaXI ACNNNNNCTCC 2 cut(s) 1094, 1124
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 615, 718, 823, 935
Bse118I RCCGGY 2 cut(s) 569, 687
Bse3DI GCAATG 1 cut(s) 224
BseDI CCNNGG 8 cut(s) 202, 368, 483, 495, 609, 717, 1034, 1080
BseGI GGATG 3 cut(s) 325, 471, 874
BseLI CCNNNNNNNGG 5 cut(s) 246, 615, 718, 823, 935
BseMI GCAATG 1 cut(s) 224
BseRI GAGGAG 3 cut(s) 169, 1115, 1163
BseXI GCAGC 2 cut(s) 631, 1056
Bsh1236I CGCG 3 cut(s) 497, 1011, 1076
BshFI GGCC 2 cut(s) 250, 1004
BsiHKAI GWGCWC 3 cut(s) 636, 955, 1155
BsiSI CCGG 7 cut(s) 204, 329, 534, 570, 688, 717, 878
BslFI GGGAC 7 cut(s) 33, 158, 210, 275, 734, 783, 789
BslI CCNNNNNNNGG 5 cut(s) 246, 615, 718, 823, 935
BsmAI GTCTC 1 cut(s) 948
BsmFI GGGAC 7 cut(s) 33, 158, 210, 275, 734, 783, 789
BsmI GAATGC 1 cut(s) 179
BsnI GGCC 2 cut(s) 250, 1004
Bsp1286I GDGCHC 3 cut(s) 636, 955, 1155
Bsp143I GATC 4 cut(s) 425, 445, 813, 966
Bsp1720I GCTNAGC 1 cut(s) 230
BspANI GGCC 2 cut(s) 250, 1004
BspFNI CGCG 3 cut(s) 497, 1011, 1076
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 3 cut(s) 345, 427, 805
BspOI GCTAGC 1 cut(s) 530
BspPI GGATC 3 cut(s) 420, 433, 808
BspTI CTTAAG 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 224
BsrFI RCCGGY 2 cut(s) 569, 687
BssAI RCCGGY 2 cut(s) 569, 687
BssECI CCNNGG 8 cut(s) 202, 368, 483, 495, 609, 717, 1034, 1080
BssMI GATC 4 cut(s) 425, 445, 813, 966
BssNI GRCGYC 1 cut(s) 1172
BssT1I CCWWGG 2 cut(s) 609, 1034
Bst4CI ACNGT 1 cut(s) 369
BstACI GRCGYC 1 cut(s) 1172
BstAFI CTTAAG 1 cut(s) 818
BstC8I GCNNGC 5 cut(s) 528, 624, 636, 1074, 1155
BstDEI CTNAG 2 cut(s) 230, 724
BstDSI CCRYGG 3 cut(s) 368, 483, 495
BstEII GGTNACC 1 cut(s) 565
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 3 cut(s) 325, 471, 874
BstFNI CGCG 3 cut(s) 497, 1011, 1076
BstHHI GCGC 1 cut(s) 1011
BstKTI GATC 4 cut(s) 428, 448, 816, 969
BstMAI GTCTC 1 cut(s) 948
BstMBI GATC 4 cut(s) 425, 445, 813, 966
BstMWI GCNNNNNNNGC 8 cut(s) 88, 213, 256, 297, 1015, 1024, 1082, 1150
BstPI GGTNACC 1 cut(s) 565
BstSCI CCNGG 3 cut(s) 202, 328, 716
BstSFI CTRYAG 1 cut(s) 788
BstUI CGCG 3 cut(s) 497, 1011, 1076
BstV1I GCAGC 2 cut(s) 631, 1056
BstV2I GAAGAC 1 cut(s) 290
BstX2I RGATCY 1 cut(s) 425
BstXI CCANNNNNNTGG 1 cut(s) 49
BstYI RGATCY 1 cut(s) 425
BsuI GTATCC 1 cut(s) 1023
BsuRI GGCC 2 cut(s) 250, 1004
BtgI CCRYGG 3 cut(s) 368, 483, 495
BtgZI GCGATG 1 cut(s) 197
BtsCI GGATG 3 cut(s) 325, 471, 874
Cac8I GCNNGC 5 cut(s) 528, 624, 636, 1074, 1155
CciI TCATGA 1 cut(s) 910
CfoI GCGC 1 cut(s) 1011
Cfr10I RCCGGY 2 cut(s) 569, 687
Cfr13I GGNCC 2 cut(s) 685, 803
Cfr42I CCGCGG 1 cut(s) 498
CpoI CGGWCCG 1 cut(s) 685
CseI GACGC 1 cut(s) 1065
Csp6I GTAC 1 cut(s) 492
CspI CGGWCCG 1 cut(s) 685
CviAII CATG 3 cut(s) 29, 887, 911
CviQI GTAC 1 cut(s) 492
DdeI CTNAG 2 cut(s) 230, 724
DpnI GATC 4 cut(s) 427, 447, 815, 968
DpnII GATC 4 cut(s) 425, 445, 813, 966
DrdI GACNNNNNNGTC 1 cut(s) 1171
DseDI GACNNNNNNGTC 1 cut(s) 1171
EaeI YGGCCR 1 cut(s) 248
Ecl136II GAGCTC 3 cut(s) 634, 953, 1153
Eco130I CCWWGG 2 cut(s) 609, 1034
Eco24I GRGCYC 3 cut(s) 636, 955, 1155
Eco47I GGWCC 2 cut(s) 685, 803
Eco53kI GAGCTC 3 cut(s) 634, 953, 1153
Eco91I GGTNACC 1 cut(s) 565
EcoICRI GAGCTC 3 cut(s) 634, 953, 1153
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoO109I RGGNCCY 1 cut(s) 803
EcoO65I GGTNACC 1 cut(s) 565
EcoT14I CCWWGG 2 cut(s) 609, 1034
EcoT38I GRGCYC 3 cut(s) 636, 955, 1155
ErhI CCWWGG 2 cut(s) 609, 1034
FaeI CATG 3 cut(s) 32, 890, 914
FaqI GGGAC 7 cut(s) 33, 158, 210, 275, 734, 783, 789
FatI CATG 3 cut(s) 28, 886, 910
FauI CCCGC 5 cut(s) 187, 252, 484, 964, 1081
FauNDI CATATG 2 cut(s) 255, 277
FbaI TGATCA 1 cut(s) 966
FblI GTMKAC 1 cut(s) 503
Fnu4HI GCNGC 4 cut(s) 125, 620, 837, 1070
FokI GGATG 3 cut(s) 312, 458, 861
FriOI GRGCYC 3 cut(s) 636, 955, 1155
Fsp4HI GCNGC 4 cut(s) 125, 620, 837, 1070
FspBI CTAG 4 cut(s) 527, 650, 845, 1086
GlaI GCGC 1 cut(s) 1010
GluI GCNGC 4 cut(s) 125, 620, 837, 1070
HaeIII GGCC 2 cut(s) 250, 1004
HapII CCGG 7 cut(s) 204, 329, 534, 570, 688, 717, 878
HgaI GACGC 1 cut(s) 1065
HhaI GCGC 1 cut(s) 1011
Hin1I GRCGYC 1 cut(s) 1172
Hin1II CATG 3 cut(s) 32, 890, 914
Hin6I GCGC 1 cut(s) 1009
HinP1I GCGC 1 cut(s) 1009
HincII GTYRAC 1 cut(s) 504
HindII GTYRAC 1 cut(s) 504
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 6 cut(s) 9, 32, 182, 500, 892, 1103
HpaII CCGG 7 cut(s) 204, 329, 534, 570, 688, 717, 878
HphI GGTGA 3 cut(s) 388, 445, 577
Hpy166II GTNNAC 2 cut(s) 492, 504
Hpy188I TCNGA 3 cut(s) 415, 813, 1081
Hpy188III TCNNGA 4 cut(s) 64, 363, 733, 911
Hpy8I GTNNAC 2 cut(s) 492, 504
Hpy99I CGWCG 3 cut(s) 508, 1168, 1177
HpyAV CCTTC 7 cut(s) 163, 359, 649, 730, 817, 867, 1057
HpyCH4III ACNGT 1 cut(s) 369
HpyCH4IV ACGT 2 cut(s) 218, 1172
HpyCH4V TGCA 1 cut(s) 596
HpyF10VI GCNNNNNNNGC 8 cut(s) 88, 213, 256, 297, 1015, 1024, 1082, 1150
HpyF3I CTNAG 2 cut(s) 230, 724
HpySE526I ACGT 2 cut(s) 218, 1172
Hsp92I GRCGYC 1 cut(s) 1172
Hsp92II CATG 3 cut(s) 32, 890, 914
HspAI GCGC 1 cut(s) 1009
Ksp22I TGATCA 1 cut(s) 966
KspI CCGCGG 1 cut(s) 498
Kzo9I GATC 4 cut(s) 425, 445, 813, 966
LmnI GCTCC 4 cut(s) 55, 316, 958, 1150
LpnPI CCDG 7 cut(s) 217, 342, 547, 583, 701, 730, 891
Lsp1109I GCAGC 2 cut(s) 631, 1056
LweI GCATC 2 cut(s) 334, 907
MaeI CTAG 4 cut(s) 527, 650, 845, 1086
MaeII ACGT 2 cut(s) 218, 1172
MaeIII GTNAC 2 cut(s) 565, 893
MalI GATC 4 cut(s) 427, 447, 815, 968
MboI GATC 4 cut(s) 425, 445, 813, 966
MboII GAAGA 7 cut(s) 18, 295, 424, 679, 685, 926, 1033
MflI RGATCY 1 cut(s) 425
MhlI GDGCHC 3 cut(s) 636, 955, 1155
MlsI TGGCCA 1 cut(s) 250
MluCI AATT 2 cut(s) 449, 1115
MluNI TGGCCA 1 cut(s) 250
MlyI GAGTC 5 cut(s) 26, 176, 509, 901, 1112
MmeI TCCRAC 1 cut(s) 321
Mox20I TGGCCA 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 348
MscI TGGCCA 1 cut(s) 250
MseI TTAA 3 cut(s) 380, 548, 819
MslI CAYNNNNRTG 2 cut(s) 563, 915
Msp20I TGGCCA 1 cut(s) 250
MspA1I CMGCKG 1 cut(s) 497
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 7 cut(s) 204, 329, 534, 570, 688, 717, 878
MspR9I CCNGG 3 cut(s) 204, 330, 718
Mva1269I GAATGC 1 cut(s) 179
MvnI CGCG 3 cut(s) 497, 1011, 1076
MwoI GCNNNNNNNGC 8 cut(s) 88, 213, 256, 297, 1015, 1024, 1082, 1150
NciI CCSGG 3 cut(s) 204, 330, 718
NdeI CATATG 2 cut(s) 255, 277
NdeII GATC 4 cut(s) 425, 445, 813, 966
NheI GCTAGC 1 cut(s) 526
NlaIII CATG 3 cut(s) 32, 890, 914
NlaIV GGNNCC 3 cut(s) 345, 427, 805
NmeAIII GCCGAG 1 cut(s) 1159
NmuCI GTSAC 2 cut(s) 565, 893
OliI CACNNNNGTG 1 cut(s) 563
PagI TCATGA 1 cut(s) 910
PctI GAATGC 1 cut(s) 179
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 1 cut(s) 9
PflFI GACNNNGTC 1 cut(s) 266
PflMI CCANNNNNTGG 1 cut(s) 615
PfoI TCCNGGA 1 cut(s) 328
PkrI GCNGC 4 cut(s) 126, 621, 838, 1071
PleI GAGTC 5 cut(s) 26, 176, 508, 900, 1111
PpsI GAGTC 5 cut(s) 26, 176, 508, 900, 1111
PpuMI RGGWCCY 1 cut(s) 803
Psp124BI GAGCTC 3 cut(s) 636, 955, 1155
Psp5II RGGWCCY 1 cut(s) 803
PspEI GGTNACC 1 cut(s) 565
PspN4I GGNNCC 3 cut(s) 345, 427, 805
PspPI GGNCC 2 cut(s) 685, 803
PspPPI RGGWCCY 1 cut(s) 803
PsuI RGATCY 1 cut(s) 425
PsyI GACNNNGTC 1 cut(s) 266
RsaI GTAC 1 cut(s) 493
RsaNI GTAC 1 cut(s) 492
RseI CAYNNNNRTG 2 cut(s) 563, 915
Rsr2I CGGWCCG 1 cut(s) 685
RsrII CGGWCCG 1 cut(s) 685
SacI GAGCTC 3 cut(s) 636, 955, 1155
SacII CCGCGG 1 cut(s) 498
SalI GTCGAC 1 cut(s) 502
SaqAI TTAA 3 cut(s) 380, 548, 819
SatI GCNGC 4 cut(s) 125, 620, 837, 1070
Sau3AI GATC 4 cut(s) 425, 445, 813, 966
Sau96I GGNCC 2 cut(s) 685, 803
SchI GAGTC 5 cut(s) 26, 176, 509, 901, 1112
ScrFI CCNGG 3 cut(s) 204, 330, 718
SduI GDGCHC 3 cut(s) 636, 955, 1155
SfaNI GCATC 2 cut(s) 334, 907
SfcI CTRYAG 1 cut(s) 788
Sfr303I CCGCGG 1 cut(s) 498
SgrBI CCGCGG 1 cut(s) 498
SinI GGWCC 2 cut(s) 685, 803
SmiMI CAYNNNNRTG 2 cut(s) 563, 915
SmlI CTYRAG 4 cut(s) 36, 92, 151, 818
SmoI CTYRAG 4 cut(s) 36, 92, 151, 818
Sse9I AATT 2 cut(s) 449, 1115
SspMI CTAG 4 cut(s) 527, 650, 845, 1086
SstI GAGCTC 3 cut(s) 636, 955, 1155
StyD4I CCNGG 3 cut(s) 202, 328, 716
StyI CCWWGG 2 cut(s) 609, 1034
TaaI ACNGT 1 cut(s) 369
TaiI ACGT 2 cut(s) 221, 1175
TaqI TCGA 5 cut(s) 270, 503, 949, 1044, 1140
TasI AATT 2 cut(s) 449, 1115
TauI GCSGC 2 cut(s) 127, 839
TfiI GAWTC 1 cut(s) 9
Tru1I TTAA 3 cut(s) 380, 548, 819
Tru9I TTAA 3 cut(s) 380, 548, 819
TseFI GTSAC 2 cut(s) 565, 893
TseI GCWGC 2 cut(s) 619, 1069
Tsp45I GTSAC 2 cut(s) 565, 893
TspDTI ATGAA 7 cut(s) 382, 460, 686, 863, 875, 927, 963
TspGWI ACGGA 1 cut(s) 507
Tth111I GACNNNGTC 1 cut(s) 266
Van91I CCANNNNNTGG 1 cut(s) 615
Vha464I CTTAAG 1 cut(s) 818
VpaK11BI GGWCC 2 cut(s) 685, 803
XagI CCTNNNNNAGG 1 cut(s) 821
XcmI CCANNNNNNNNNTGG 3 cut(s) 49, 366, 436
XmiI GTMKAC 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 4 cut(s) 527, 650, 845, 1086
ZraI GACGTC 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.