transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 818 |
| AccB1I | GGYRCC | 1 cut(s) | 115 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 180 |
| AccI | GTMKAC | 1 cut(s) | 339 |
| AciI | CCGC | 2 cut(s) | 287, 894 |
| AclWI | GGATC | 1 cut(s) | 727 |
| AfaI | GTAC | 5 cut(s) | 48, 145, 242, 578, 629 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AgsI | TTSAA | 2 cut(s) | 223, 553 |
| AjiI | CACGTC | 1 cut(s) | 292 |
| AjnI | CCWGG | 4 cut(s) | 111, 179, 361, 679 |
| AluBI | AGCT | 1 cut(s) | 442 |
| AluI | AGCT | 1 cut(s) | 442 |
| Alw21I | GWGCWC | 2 cut(s) | 490, 873 |
| Alw26I | GTCTC | 1 cut(s) | 678 |
| Alw44I | GTGCAC | 1 cut(s) | 486 |
| AlwI | GGATC | 1 cut(s) | 727 |
| Ama87I | CYCGRG | 1 cut(s) | 407 |
| AoxI | GGCC | 2 cut(s) | 245, 910 |
| ApaLI | GTGCAC | 1 cut(s) | 486 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 3 cut(s) | 378, 629, 718 |
| AvaI | CYCGRG | 1 cut(s) | 407 |
| AxyI | CCTNAGG | 2 cut(s) | 300, 524 |
| BaeGI | GKGCMC | 1 cut(s) | 490 |
| BanI | GGYRCC | 1 cut(s) | 115 |
| BbsI | GAAGAC | 2 cut(s) | 106, 701 |
| Bbv12I | GWGCWC | 2 cut(s) | 490, 873 |
| BccI | CCATC | 3 cut(s) | 572, 697, 807 |
| BceAI | ACGGC | 2 cut(s) | 254, 714 |
| BciT130I | CCWGG | 4 cut(s) | 113, 181, 363, 681 |
| BciVI | GTATCC | 1 cut(s) | 650 |
| BcoDI | GTCTC | 1 cut(s) | 678 |
| BfmI | CTRYAG | 2 cut(s) | 541, 850 |
| BfuI | GTATCC | 1 cut(s) | 650 |
| BglII | AGATCT | 1 cut(s) | 643 |
| Bme1390I | CCNGG | 4 cut(s) | 113, 181, 363, 681 |
| BmeT110I | CYCGRG | 1 cut(s) | 407 |
| BmgBI | CACGTC | 1 cut(s) | 292 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmiI | GGNNCC | 2 cut(s) | 117, 360 |
| BmrFI | CCNGG | 4 cut(s) | 113, 181, 363, 681 |
| BmsI | GCATC | 3 cut(s) | 285, 439, 543 |
| BoxI | GACNNNNGTC | 1 cut(s) | 901 |
| BpiI | GAAGAC | 2 cut(s) | 106, 701 |
| BpmI | CTGGAG | 1 cut(s) | 702 |
| BsaBI | GATNNNNATC | 1 cut(s) | 718 |
| BsaJI | CCNNGG | 2 cut(s) | 326, 679 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 224, 254 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| Bse21I | CCTNAGG | 2 cut(s) | 300, 524 |
| Bse3DI | GCAATG | 1 cut(s) | 168 |
| Bse8I | GATNNNNATC | 1 cut(s) | 718 |
| BseBI | CCWGG | 4 cut(s) | 113, 181, 363, 681 |
| BseDI | CCNNGG | 2 cut(s) | 326, 679 |
| BseGI | GGATG | 4 cut(s) | 97, 402, 459, 799 |
| BseJI | GATNNNNATC | 1 cut(s) | 718 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseMI | GCAATG | 1 cut(s) | 168 |
| BseRI | GAGGAG | 2 cut(s) | 248, 881 |
| BseSI | GKGCMC | 1 cut(s) | 490 |
| BseYI | CCCAGC | 1 cut(s) | 147 |
| BsgI | GTGCAG | 1 cut(s) | 760 |
| Bsh1285I | CGRYCG | 1 cut(s) | 653 |
| BshFI | GGCC | 2 cut(s) | 247, 912 |
| BshNI | GGYRCC | 1 cut(s) | 115 |
| BsiEI | CGRYCG | 1 cut(s) | 653 |
| BsiHKAI | GWGCWC | 2 cut(s) | 490, 873 |
| BsiHKCI | CYCGRG | 1 cut(s) | 407 |
| BslFI | GGGAC | 1 cut(s) | 460 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BsmAI | GTCTC | 1 cut(s) | 678 |
| BsmBI | CGTCTC | 1 cut(s) | 678 |
| BsmFI | GGGAC | 1 cut(s) | 460 |
| BsnI | GGCC | 2 cut(s) | 247, 912 |
| BsoBI | CYCGRG | 1 cut(s) | 407 |
| Bsp1286I | GDGCHC | 2 cut(s) | 490, 873 |
| Bsp143I | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| BspACI | CCGC | 2 cut(s) | 287, 894 |
| BspANI | GGCC | 2 cut(s) | 247, 912 |
| BspLI | GGNNCC | 2 cut(s) | 117, 360 |
| BspPI | GGATC | 1 cut(s) | 727 |
| BspT107I | GGYRCC | 1 cut(s) | 115 |
| BsrDI | GCAATG | 1 cut(s) | 168 |
| BssECI | CCNNGG | 2 cut(s) | 326, 679 |
| BssMI | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| BssT1I | CCWWGG | 1 cut(s) | 326 |
| Bst2UI | CCWGG | 4 cut(s) | 113, 181, 363, 681 |
| BstC8I | GCNNGC | 2 cut(s) | 132, 454 |
| BstDEI | CTNAG | 2 cut(s) | 300, 524 |
| BstEII | GGTNACC | 2 cut(s) | 559, 706 |
| BstF5I | GGATG | 4 cut(s) | 97, 402, 459, 799 |
| BstKTI | GATC | 5 cut(s) | 594, 610, 646, 653, 722 |
| BstMAI | GTCTC | 1 cut(s) | 678 |
| BstMBI | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| BstMCI | CGRYCG | 1 cut(s) | 653 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 877 |
| BstNI | CCWGG | 4 cut(s) | 113, 181, 363, 681 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 901 |
| BstPI | GGTNACC | 2 cut(s) | 559, 706 |
| BstSCI | CCNGG | 4 cut(s) | 111, 179, 361, 679 |
| BstSFI | CTRYAG | 2 cut(s) | 541, 850 |
| BstSLI | GKGCMC | 1 cut(s) | 490 |
| BstV2I | GAAGAC | 2 cut(s) | 106, 701 |
| BstX2I | RGATCY | 1 cut(s) | 643 |
| BstYI | RGATCY | 1 cut(s) | 643 |
| Bsu36I | CCTNAGG | 2 cut(s) | 300, 524 |
| BsuI | GTATCC | 1 cut(s) | 650 |
| BsuRI | GGCC | 2 cut(s) | 247, 912 |
| BtgZI | GCGATG | 1 cut(s) | 716 |
| BtrI | CACGTC | 1 cut(s) | 292 |
| BtsCI | GGATG | 4 cut(s) | 97, 402, 459, 799 |
| Cac8I | GCNNGC | 2 cut(s) | 132, 454 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| Csp6I | GTAC | 5 cut(s) | 47, 144, 241, 577, 628 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 393, 428, 570, 605 |
| CviAII | CATG | 3 cut(s) | 37, 344, 739 |
| CviQI | GTAC | 5 cut(s) | 47, 144, 241, 577, 628 |
| DdeI | CTNAG | 2 cut(s) | 300, 524 |
| DpnI | GATC | 5 cut(s) | 593, 609, 645, 652, 721 |
| DpnII | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 818 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 818 |
| EciI | GGCGGA | 1 cut(s) | 909 |
| Eco130I | CCWWGG | 1 cut(s) | 326 |
| Eco147I | AGGCCT | 1 cut(s) | 912 |
| Eco32I | GATATC | 1 cut(s) | 841 |
| Eco81I | CCTNAGG | 2 cut(s) | 300, 524 |
| Eco88I | CYCGRG | 1 cut(s) | 407 |
| Eco91I | GGTNACC | 2 cut(s) | 559, 706 |
| EcoO65I | GGTNACC | 2 cut(s) | 559, 706 |
| EcoRII | CCWGG | 4 cut(s) | 111, 179, 361, 679 |
| EcoRV | GATATC | 1 cut(s) | 841 |
| EcoT14I | CCWWGG | 1 cut(s) | 326 |
| ErhI | CCWWGG | 1 cut(s) | 326 |
| Esp3I | CGTCTC | 1 cut(s) | 678 |
| FaeI | CATG | 3 cut(s) | 40, 347, 742 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 91, 123, 258, 290 |
| FaqI | GGGAC | 1 cut(s) | 460 |
| FatI | CATG | 3 cut(s) | 36, 343, 738 |
| FauNDI | CATATG | 1 cut(s) | 481 |
| FblI | GTMKAC | 1 cut(s) | 339 |
| FokI | GGATG | 4 cut(s) | 104, 409, 446, 786 |
| GsaI | CCCAGC | 1 cut(s) | 151 |
| GsuI | CTGGAG | 1 cut(s) | 702 |
| HaeIII | GGCC | 2 cut(s) | 247, 912 |
| Hin1II | CATG | 3 cut(s) | 40, 347, 742 |
| HincII | GTYRAC | 1 cut(s) | 340 |
| HindII | GTYRAC | 1 cut(s) | 340 |
| HinfI | GANTC | 1 cut(s) | 689 |
| HphI | GGTGA | 3 cut(s) | 378, 629, 718 |
| Hpy166II | GTNNAC | 4 cut(s) | 144, 340, 488, 829 |
| Hpy188I | TCNGA | 1 cut(s) | 753 |
| Hpy188III | TCNNGA | 4 cut(s) | 568, 654, 809, 906 |
| Hpy8I | GTNNAC | 4 cut(s) | 144, 340, 488, 829 |
| HpyAV | CCTTC | 3 cut(s) | 76, 221, 509 |
| HpyCH4IV | ACGT | 2 cut(s) | 291, 873 |
| HpyCH4V | TGCA | 6 cut(s) | 166, 209, 488, 534, 767, 777 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 877 |
| HpyF3I | CTNAG | 2 cut(s) | 300, 524 |
| HpySE526I | ACGT | 2 cut(s) | 291, 873 |
| Hsp92II | CATG | 3 cut(s) | 40, 347, 742 |
| Kzo9I | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| LmnI | GCTCC | 2 cut(s) | 358, 868 |
| LweI | GCATC | 3 cut(s) | 285, 439, 543 |
| MaeII | ACGT | 2 cut(s) | 291, 873 |
| MaeIII | GTNAC | 3 cut(s) | 196, 559, 706 |
| MalI | GATC | 5 cut(s) | 593, 609, 645, 652, 721 |
| MboI | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| MboII | GAAGA | 4 cut(s) | 111, 196, 638, 706 |
| MflI | RGATCY | 1 cut(s) | 643 |
| MhlI | GDGCHC | 2 cut(s) | 490, 873 |
| MluCI | AATT | 2 cut(s) | 167, 419 |
| MmeI | TCCRAC | 4 cut(s) | 336, 393, 487, 526 |
| MseI | TTAA | 2 cut(s) | 369, 876 |
| MslI | CAYNNNNRTG | 1 cut(s) | 782 |
| MspR9I | CCNGG | 4 cut(s) | 113, 181, 363, 681 |
| MvaI | CCWGG | 4 cut(s) | 113, 181, 363, 681 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 877 |
| NdeI | CATATG | 1 cut(s) | 481 |
| NdeII | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| NlaIII | CATG | 3 cut(s) | 40, 347, 742 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 360 |
| NmuCI | GTSAC | 2 cut(s) | 196, 706 |
| PceI | AGGCCT | 1 cut(s) | 912 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 12, 698 |
| PfeI | GAWTC | 1 cut(s) | 689 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 180 |
| PfoI | TCCNGGA | 1 cut(s) | 179 |
| Ple19I | CGATCG | 1 cut(s) | 653 |
| PshAI | GACNNNNGTC | 1 cut(s) | 901 |
| Psp6I | CCWGG | 4 cut(s) | 111, 179, 361, 679 |
| PspEI | GGTNACC | 2 cut(s) | 559, 706 |
| PspFI | CCCAGC | 1 cut(s) | 147 |
| PspGI | CCWGG | 4 cut(s) | 111, 179, 361, 679 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 360 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| PsuI | RGATCY | 1 cut(s) | 643 |
| PvuI | CGATCG | 1 cut(s) | 653 |
| RsaI | GTAC | 5 cut(s) | 48, 145, 242, 578, 629 |
| RsaNI | GTAC | 5 cut(s) | 47, 144, 241, 577, 628 |
| RseI | CAYNNNNRTG | 1 cut(s) | 782 |
| SalI | GTCGAC | 1 cut(s) | 338 |
| SaqAI | TTAA | 2 cut(s) | 369, 876 |
| Sau3AI | GATC | 5 cut(s) | 591, 607, 643, 650, 719 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| ScrFI | CCNGG | 4 cut(s) | 113, 181, 363, 681 |
| SduI | GDGCHC | 2 cut(s) | 490, 873 |
| SfaNI | GCATC | 3 cut(s) | 285, 439, 543 |
| SfcI | CTRYAG | 2 cut(s) | 541, 850 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 782 |
| Sse9I | AATT | 2 cut(s) | 167, 419 |
| SseBI | AGGCCT | 1 cut(s) | 912 |
| SsiI | CCGC | 2 cut(s) | 287, 894 |
| SspI | AATATT | 1 cut(s) | 76 |
| StuI | AGGCCT | 1 cut(s) | 912 |
| StyD4I | CCNGG | 4 cut(s) | 111, 179, 361, 679 |
| StyI | CCWWGG | 1 cut(s) | 326 |
| TaiI | ACGT | 2 cut(s) | 294, 876 |
| TaqI | TCGA | 6 cut(s) | 339, 537, 606, 649, 692, 726 |
| TasI | AATT | 2 cut(s) | 167, 419 |
| TfiI | GAWTC | 1 cut(s) | 689 |
| Tru1I | TTAA | 2 cut(s) | 369, 876 |
| Tru9I | TTAA | 2 cut(s) | 369, 876 |
| TseFI | GTSAC | 2 cut(s) | 196, 706 |
| Tsp45I | GTSAC | 2 cut(s) | 196, 706 |
| TspDTI | ATGAA | 3 cut(s) | 25, 240, 800 |
| TspGWI | ACGGA | 2 cut(s) | 111, 576 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 180 |
| VneI | GTGCAC | 1 cut(s) | 486 |
| XmiI | GTMKAC | 1 cut(s) | 339 |