RchiOBHm_Chr4g0400381

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
17943250 .. 17943555
306 bp
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UTR
Exon/CDS
Intron
PRQ37242

Sequence Viewer

Length: 306 bp
ATGGTTGCTATCATTGCCGGTGTAGTTGCCGGGTTCATTACGCTCTCTGTTCTCAAATTCTTGGTTTCGAGGCAACGATGGAAATTAAAGGACTCTGGGTCTGGCTCCAGGCAAACAATGACAAAGCCAACAATGAACCCGGAACAATTTATGCCTACTAATTTGTGTCGTCACTTTCCGCTGGAAGAGATCACAACCGCCACCAAAAACATCAATGATACATTCATTATTGGAGCTGGAGGATTTGGCAACGTATCAAAGGATGCACTGATGGTGGAGCCACCCCAGTTGCCATCAAACGACTGA

Protein Analysis

101

Amino Acids

11.02

Weight (kDa)

8.98

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 179, 198
AcsI RAATTY 1 cut(s) 56
AhdI GACNNNNNGTC 1 cut(s) 97
AjnI CCWGG 1 cut(s) 107
AluBI AGCT 1 cut(s) 236
AluI AGCT 1 cut(s) 236
ApoI RAATTY 1 cut(s) 56
AsuC2I CCSGG 2 cut(s) 31, 140
BccI CCATC 3 cut(s) 72, 265, 301
BciT130I CCWGG 1 cut(s) 109
BcnI CCSGG 2 cut(s) 31, 140
Bme1390I CCNGG 3 cut(s) 31, 109, 140
BmeRI GACNNNNNGTC 1 cut(s) 97
BmiI GGNNCC 2 cut(s) 106, 279
BmrFI CCNGG 3 cut(s) 31, 109, 140
BmrI ACTGGG 1 cut(s) 280
BmsI GCATC 1 cut(s) 253
BmuI ACTGGG 1 cut(s) 280
BpmI CTGGAG 2 cut(s) 91, 258
BpuMI CCSGG 2 cut(s) 31, 140
Bse118I RCCGGY 1 cut(s) 17
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 12
BseBI CCWGG 1 cut(s) 109
BseGI GGATG 1 cut(s) 268
BseMI GCAATG 1 cut(s) 12
BseNI ACTGG 1 cut(s) 286
BsiSI CCGG 3 cut(s) 18, 30, 140
Bsp143I GATC 1 cut(s) 189
BspACI CCGC 2 cut(s) 179, 198
BspLI GGNNCC 2 cut(s) 106, 279
BsrDI GCAATG 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 17
BsrI ACTGG 1 cut(s) 286
BssAI RCCGGY 1 cut(s) 17
BssMI GATC 1 cut(s) 189
Bst2UI CCWGG 1 cut(s) 109
Bst6I CTCTTC 1 cut(s) 180
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 1 cut(s) 192
BstMBI GATC 1 cut(s) 189
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 1 cut(s) 109
BstSCI CCNGG 3 cut(s) 29, 107, 138
BtsCI GGATG 1 cut(s) 268
BtsIMutI CAGTG 1 cut(s) 266
Cfr10I RCCGGY 1 cut(s) 17
CspCI CAANNNNNGTGG 2 cut(s) 270, 305
CviJI RGCY 4 cut(s) 105, 127, 236, 280
CviKI_1 RGCY 4 cut(s) 105, 127, 236, 280
DpnI GATC 1 cut(s) 191
DpnII GATC 1 cut(s) 189
DriI GACNNNNNGTC 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 180
Eam1105I GACNNNNNGTC 1 cut(s) 97
EarI CTCTTC 1 cut(s) 180
EcoRII CCWGG 1 cut(s) 107
FaiI YATR 1 cut(s) 152
FokI GGATG 1 cut(s) 275
GsuI CTGGAG 2 cut(s) 91, 258
HapII CCGG 3 cut(s) 18, 30, 140
HinfI GANTC 1 cut(s) 92
HpaII CCGG 3 cut(s) 18, 30, 140
HpyCH4IV ACGT 1 cut(s) 252
HpyCH4V TGCA 1 cut(s) 266
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpySE526I ACGT 1 cut(s) 252
Kzo9I GATC 1 cut(s) 189
LmnI GCTCC 3 cut(s) 110, 233, 277
LweI GCATC 1 cut(s) 253
MaeII ACGT 1 cut(s) 252
MaeIII GTNAC 1 cut(s) 170
MalI GATC 1 cut(s) 191
MboI GATC 1 cut(s) 189
MboII GAAGA 1 cut(s) 197
MluCI AATT 4 cut(s) 56, 83, 146, 160
MlyI GAGTC 1 cut(s) 86
MnlI CCTC 2 cut(s) 63, 233
MseI TTAA 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 181
MspI CCGG 3 cut(s) 18, 30, 140
MspR9I CCNGG 3 cut(s) 31, 109, 140
MvaI CCWGG 1 cut(s) 109
MwoI GCNNNNNNNGC 1 cut(s) 14
NciI CCSGG 2 cut(s) 31, 140
NdeII GATC 1 cut(s) 189
NlaIV GGNNCC 2 cut(s) 106, 279
NmuCI GTSAC 1 cut(s) 170
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 107
PspGI CCWGG 1 cut(s) 107
PspN4I GGNNCC 2 cut(s) 106, 279
SaqAI TTAA 1 cut(s) 86
Sau3AI GATC 1 cut(s) 189
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 3 cut(s) 31, 109, 140
SetI ASST 2 cut(s) 238, 255
SfaNI GCATC 1 cut(s) 253
Sse9I AATT 4 cut(s) 56, 83, 146, 160
SsiI CCGC 2 cut(s) 179, 198
StyD4I CCNGG 3 cut(s) 29, 107, 138
TaiI ACGT 1 cut(s) 255
TaqI TCGA 1 cut(s) 68
TasI AATT 4 cut(s) 56, 83, 146, 160
Tru1I TTAA 1 cut(s) 86
Tru9I TTAA 1 cut(s) 86
TscAI CASTG 1 cut(s) 273
TseFI GTSAC 1 cut(s) 170
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 3 cut(s) 25, 149, 214
TspRI CASTG 1 cut(s) 273
XapI RAATTY 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.