Rorug02G0514500

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
64583029 .. 64584060
1032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0514500.1

Sequence Viewer

Length: 1032 bp
ATGAGAAACCCTAGTCTCTCCCAAGCGGCGCTCCTCTTTGCGCTCATCCTAACTCAACTTGGTTGCGACGGCGACAAAAACAGCGGCTCCGGCTGCATTGAACCACCAAGAAATCTCTCTCTAGCCCTTCCAGAGGTGGATGGCCCTCTCTACCTCAAGGATAAACCTCCTTACTTCTCCCAATCTTTTGATCGAATCGGTGTCGGTGGAGCTCTCTCTCTCGAAACCATAAGGCTGCATCACTTCGTGGACGGCTCCACTCTCGGAGACTCTTCCATTCATGGTGGGCACTTGCGGCGACGAGGCTGGCGATTTTGGTATGGTCTGGTGATGGCGTCTTGGTCTGCTGCGCGGGGAATCGAGGTCATCTCCCCATCTGGGAATGGCCACTTTGATGGCAATGAATGGGATCCAAATCGGATTGATGATTTGGTACAGCCAGGAGGTCAGACTGGCTGGGTGGCGCCGATTTGGCTGGGGCTCACTTCTTCTGTGGCGGCGCTGGGCTGTCGATTGGGCTTGGTTTCCATGCAAAGGTCACGACGCTTGGTGGTGAAGCACAGAGAGCGACACAAGCTTTCGGAAGCCGATGATTTGGAGGCGGTATTGGAGTTTGTCGGCGTCACTGCGATGGTGCTTCGGAGCAGTGACAGCAGGAATCCGATTCGGACTTGGATGCCCAAATCATTATGGGTGGCGATGCCTTGGGGTTGTAGTTGGACCCAAGTTCAATTCTGGTTCTTGATAACGTCGAGGGCAGGATTGTTCTCGGTGTGGTGGTTGTCTGATCAGCCAAATTTGATGGCGGCGGCATTGACGCGGTGGCCAACAACGAAACTCATTTCGAGCCTTAAGCTTGTTGGGCCTCTCTCTGGGCTGGGTGCCCTATTCGGTTTTGGACTTGGTTTGTTGGGGTCCAGAATCCTTAATGAGCTTCTTGGTCTGCGGGCTGAGCTTAGAGAAGACATATTTTGGGCCTGGCTTTATTGGGTTCAAAATGACGGTTGGGTTTTATACCCACTTTCTAGTTAG

Protein Analysis

343

Amino Acids

38.07

Weight (kDa)

8.72

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 463, 881
AccII CGCG 2 cut(s) 352, 820
AclWI GGATC 2 cut(s) 404, 417
AcoI YGGCCR 2 cut(s) 385, 824
AcsI RAATTY 1 cut(s) 796
AcyI GRCGYC 3 cut(s) 335, 464, 621
AdeI CACNNNGTG 1 cut(s) 247
AfaI GTAC 1 cut(s) 435
AfiI CCNNNNNNNGG 4 cut(s) 133, 378, 534, 872
AflII CTTAAG 1 cut(s) 851
AgsI TTSAA 3 cut(s) 101, 731, 995
AjnI CCWGG 2 cut(s) 439, 977
AluBI AGCT 5 cut(s) 212, 577, 856, 934, 955
AluI AGCT 5 cut(s) 212, 577, 856, 934, 955
Alw21I GWGCWC 1 cut(s) 214
Alw26I GTCTC 2 cut(s) 20, 261
AlwI GGATC 2 cut(s) 404, 417
AoxI GGCC 5 cut(s) 142, 385, 824, 863, 975
ApeKI GCWGC 3 cut(s) 93, 235, 347
ApoI RAATTY 1 cut(s) 796
AspLEI GCGC 5 cut(s) 31, 43, 352, 466, 502
AspS9I GGNCC 5 cut(s) 143, 720, 863, 915, 975
AsuHPI GGTGA 2 cut(s) 340, 565
AvaII GGWCC 2 cut(s) 720, 915
BaeGI GKGCMC 2 cut(s) 291, 886
BalI TGGCCA 2 cut(s) 387, 826
BamHI GGATCC 1 cut(s) 409
BanI GGYRCC 2 cut(s) 463, 881
BanII GRGCYC 2 cut(s) 214, 483
BbsI GAAGAC 1 cut(s) 969
Bbv12I GWGCWC 1 cut(s) 214
BbvI GCAGC 3 cut(s) 80, 222, 334
BccI CCATC 6 cut(s) 134, 325, 382, 389, 625, 796
BceAI ACGGC 2 cut(s) 85, 268
BciT130I CCWGG 2 cut(s) 441, 979
BclI TGATCA 1 cut(s) 787
BcoDI GTCTC 2 cut(s) 20, 261
BfaI CTAG 3 cut(s) 12, 122, 1026
BfoI RGCGCY 3 cut(s) 32, 467, 503
BfrI CTTAAG 1 cut(s) 851
BglI GCCNNNNNGGC 1 cut(s) 472
BisI GCNGC 9 cut(s) 27, 85, 94, 236, 296, 348, 498, 807, 810
BlpI GCTNAGC 1 cut(s) 951
BlsI GCNGC 9 cut(s) 28, 86, 95, 237, 297, 349, 499, 808, 811
Bme1390I CCNGG 2 cut(s) 441, 979
Bme18I GGWCC 2 cut(s) 720, 915
BmgT120I GGNCC 5 cut(s) 143, 720, 863, 915, 975
BmiI GGNNCC 7 cut(s) 88, 256, 411, 465, 722, 883, 916
BmrFI CCNGG 2 cut(s) 441, 979
BmsI GCATC 3 cut(s) 247, 666, 690
BpiI GAAGAC 1 cut(s) 969
BplI GAGNNNNNCTC 2 cut(s) 353, 385
Bpu1102I GCTNAGC 1 cut(s) 951
BpuEI CTTGAG 1 cut(s) 140
BsaBI GATNNNNATC 1 cut(s) 414
BsaHI GRCGYC 3 cut(s) 335, 464, 621
BsaJI CCNNGG 1 cut(s) 704
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 378, 534, 872
Bse1I ACTGG 1 cut(s) 457
Bse3DI GCAATG 1 cut(s) 406
Bse8I GATNNNNATC 1 cut(s) 414
BseBI CCWGG 2 cut(s) 441, 979
BseDI CCNNGG 1 cut(s) 704
BseGI GGATG 3 cut(s) 45, 145, 681
BseJI GATNNNNATC 1 cut(s) 414
BseLI CCNNNNNNNGG 4 cut(s) 133, 378, 534, 872
BseMI GCAATG 1 cut(s) 406
BseMII CTCAG 1 cut(s) 942
BseNI ACTGG 1 cut(s) 457
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 2 cut(s) 291, 886
BseXI GCAGC 3 cut(s) 80, 222, 334
BseYI CCCAGC 4 cut(s) 456, 475, 502, 877
Bsh1236I CGCG 2 cut(s) 352, 820
BshFI GGCC 5 cut(s) 144, 387, 826, 865, 977
BshNI GGYRCC 2 cut(s) 463, 881
BsiHKAI GWGCWC 1 cut(s) 214
BsiSI CCGG 1 cut(s) 90
BslI CCNNNNNNNGG 4 cut(s) 133, 378, 534, 872
BsmAI GTCTC 2 cut(s) 20, 261
BsnI GGCC 5 cut(s) 144, 387, 826, 865, 977
Bsp1286I GDGCHC 4 cut(s) 214, 291, 483, 886
Bsp143I GATC 3 cut(s) 190, 409, 787
Bsp1720I GCTNAGC 1 cut(s) 951
BspANI GGCC 5 cut(s) 144, 387, 826, 865, 977
BspCNI CTCAG 1 cut(s) 943
BspFNI CGCG 2 cut(s) 352, 820
BspLI GGNNCC 7 cut(s) 88, 256, 411, 465, 722, 883, 916
BspPI GGATC 2 cut(s) 404, 417
BspT107I GGYRCC 2 cut(s) 463, 881
BspTI CTTAAG 1 cut(s) 851
BsrDI GCAATG 1 cut(s) 406
BsrI ACTGG 1 cut(s) 457
BssECI CCNNGG 1 cut(s) 704
BssMI GATC 3 cut(s) 190, 409, 787
BssNI GRCGYC 3 cut(s) 335, 464, 621
BssT1I CCWWGG 1 cut(s) 704
Bst2UI CCWGG 2 cut(s) 441, 979
Bst4CI ACNGT 1 cut(s) 1004
Bst6I CTCTTC 1 cut(s) 277
BstACI GRCGYC 3 cut(s) 335, 464, 621
BstAFI CTTAAG 1 cut(s) 851
BstC8I GCNNGC 2 cut(s) 308, 948
BstDEI CTNAG 2 cut(s) 951, 956
BstENI CCTNNNNNAGG 1 cut(s) 131
BstF5I GGATG 3 cut(s) 45, 145, 681
BstFNI CGCG 2 cut(s) 352, 820
BstH2I RGCGCY 3 cut(s) 32, 467, 503
BstHHI GCGC 5 cut(s) 31, 43, 352, 466, 502
BstKTI GATC 3 cut(s) 193, 412, 790
BstMAI GTCTC 2 cut(s) 20, 261
BstMBI GATC 3 cut(s) 190, 409, 787
BstMWI GCNNNNNNNGC 9 cut(s) 90, 93, 295, 472, 565, 574, 651, 862, 952
BstNI CCWGG 2 cut(s) 441, 979
BstSCI CCNGG 2 cut(s) 439, 977
BstSLI GKGCMC 2 cut(s) 291, 886
BstUI CGCG 2 cut(s) 352, 820
BstV1I GCAGC 3 cut(s) 80, 222, 334
BstV2I GAAGAC 1 cut(s) 969
BstX2I RGATCY 1 cut(s) 409
BstXI CCANNNNNNTGG 1 cut(s) 395
BstYI RGATCY 1 cut(s) 409
BsuRI GGCC 5 cut(s) 144, 387, 826, 865, 977
BtgZI GCGATG 2 cut(s) 644, 713
BtsCI GGATG 3 cut(s) 45, 145, 681
BtsI GCAGTG 2 cut(s) 624, 652
BtsIMutI CAGTG 2 cut(s) 624, 652
Cac8I GCNNGC 2 cut(s) 308, 948
CfoI GCGC 5 cut(s) 31, 43, 352, 466, 502
Cfr13I GGNCC 5 cut(s) 143, 720, 863, 915, 975
CseI GACGC 4 cut(s) 324, 552, 610, 826
Csp6I GTAC 1 cut(s) 434
CviAII CATG 2 cut(s) 281, 529
CviQI GTAC 1 cut(s) 434
DdeI CTNAG 2 cut(s) 951, 956
DinI GGCGCC 1 cut(s) 465
DpnI GATC 3 cut(s) 192, 411, 789
DpnII GATC 3 cut(s) 190, 409, 787
DraIII CACNNNGTG 1 cut(s) 247
EaeI YGGCCR 2 cut(s) 385, 824
Eam1104I CTCTTC 1 cut(s) 277
EarI CTCTTC 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 212
Eco130I CCWWGG 1 cut(s) 704
Eco24I GRGCYC 2 cut(s) 214, 483
Eco47I GGWCC 2 cut(s) 720, 915
Eco53kI GAGCTC 1 cut(s) 212
EcoICRI GAGCTC 1 cut(s) 212
EcoNI CCTNNNNNAGG 1 cut(s) 131
EcoRII CCWGG 2 cut(s) 439, 977
EcoT14I CCWWGG 1 cut(s) 704
EcoT38I GRGCYC 2 cut(s) 214, 483
EgeI GGCGCC 1 cut(s) 465
EheI GGCGCC 1 cut(s) 465
ErhI CCWWGG 1 cut(s) 704
FaeI CATG 2 cut(s) 284, 532
FaiI YATR 7 cut(s) 230, 282, 321, 530, 691, 968, 1015
FatI CATG 2 cut(s) 280, 528
FauI CCCGC 2 cut(s) 345, 939
FbaI TGATCA 1 cut(s) 787
Fnu4HI GCNGC 9 cut(s) 27, 85, 94, 236, 296, 348, 498, 807, 810
FokI GGATG 3 cut(s) 32, 152, 688
FriOI GRGCYC 2 cut(s) 214, 483
Fsp4HI GCNGC 9 cut(s) 27, 85, 94, 236, 296, 348, 498, 807, 810
FspBI CTAG 3 cut(s) 12, 122, 1026
GlaI GCGC 5 cut(s) 30, 42, 351, 465, 501
GluI GCNGC 9 cut(s) 27, 85, 94, 236, 296, 348, 498, 807, 810
GsaI CCCAGC 4 cut(s) 460, 479, 506, 881
HaeII RGCGCY 3 cut(s) 32, 467, 503
HaeIII GGCC 5 cut(s) 144, 387, 826, 865, 977
HapII CCGG 1 cut(s) 90
HgaI GACGC 4 cut(s) 324, 552, 610, 826
HhaI GCGC 5 cut(s) 31, 43, 352, 466, 502
Hin1I GRCGYC 3 cut(s) 335, 464, 621
Hin1II CATG 2 cut(s) 284, 532
Hin6I GCGC 5 cut(s) 29, 41, 350, 464, 500
HinP1I GCGC 5 cut(s) 29, 41, 350, 464, 500
HindIII AAGCTT 2 cut(s) 575, 854
HinfI GANTC 6 cut(s) 195, 269, 357, 658, 664, 921
HpaII CCGG 1 cut(s) 90
HphI GGTGA 2 cut(s) 340, 565
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 8 cut(s) 266, 420, 450, 583, 642, 663, 669, 787
Hpy188III TCNNGA 5 cut(s) 131, 221, 540, 742, 918
Hpy8I GTNNAC 1 cut(s) 250
Hpy99I CGWCG 4 cut(s) 71, 303, 546, 754
HpyAV CCTTC 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 1004
HpyCH4IV ACGT 1 cut(s) 749
HpyCH4V TGCA 3 cut(s) 96, 238, 532
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 93, 295, 472, 565, 574, 651, 862, 952
HpyF3I CTNAG 2 cut(s) 951, 956
HpySE526I ACGT 1 cut(s) 749
Hsp92I GRCGYC 3 cut(s) 335, 464, 621
Hsp92II CATG 2 cut(s) 284, 532
HspAI GCGC 5 cut(s) 29, 41, 350, 464, 500
KasI GGCGCC 1 cut(s) 463
Ksp22I TGATCA 1 cut(s) 787
Kzo9I GATC 3 cut(s) 190, 409, 787
LmnI GCTCC 5 cut(s) 36, 92, 209, 260, 642
Lsp1109I GCAGC 3 cut(s) 80, 222, 334
LweI GCATC 3 cut(s) 247, 666, 690
MaeI CTAG 3 cut(s) 12, 122, 1026
MaeII ACGT 1 cut(s) 749
MaeIII GTNAC 3 cut(s) 537, 622, 647
MalI GATC 3 cut(s) 192, 411, 789
MboI GATC 3 cut(s) 190, 409, 787
MboII GAAGA 3 cut(s) 264, 480, 974
MflI RGATCY 1 cut(s) 409
MhlI GDGCHC 4 cut(s) 214, 291, 483, 886
MlsI TGGCCA 2 cut(s) 387, 826
MluCI AATT 2 cut(s) 731, 796
MluNI TGGCCA 2 cut(s) 387, 826
Mly113I GGCGCC 1 cut(s) 464
MlyI GAGTC 1 cut(s) 263
MmeI TCCRAC 1 cut(s) 698
Mox20I TGGCCA 2 cut(s) 387, 826
MscI TGGCCA 2 cut(s) 387, 826
MseI TTAA 2 cut(s) 852, 927
MslI CAYNNNNRTG 2 cut(s) 393, 629
Msp20I TGGCCA 2 cut(s) 387, 826
MspA1I CMGCKG 1 cut(s) 84
MspCI CTTAAG 1 cut(s) 851
MspI CCGG 1 cut(s) 90
MspR9I CCNGG 2 cut(s) 441, 979
MvaI CCWGG 2 cut(s) 441, 979
MvnI CGCG 2 cut(s) 352, 820
MwoI GCNNNNNNNGC 9 cut(s) 90, 93, 295, 472, 565, 574, 651, 862, 952
NarI GGCGCC 1 cut(s) 464
NdeII GATC 3 cut(s) 190, 409, 787
NlaIII CATG 2 cut(s) 284, 532
NlaIV GGNNCC 7 cut(s) 88, 256, 411, 465, 722, 883, 916
NmuCI GTSAC 3 cut(s) 537, 622, 647
PcsI WCGNNNNNNNCGW 1 cut(s) 307
PfeI GAWTC 5 cut(s) 195, 357, 658, 664, 921
PkrI GCNGC 9 cut(s) 28, 86, 95, 237, 297, 349, 499, 808, 811
PleI GAGTC 1 cut(s) 263
PluTI GGCGCC 1 cut(s) 467
PpsI GAGTC 1 cut(s) 263
Psp124BI GAGCTC 1 cut(s) 214
Psp6I CCWGG 2 cut(s) 439, 977
PspFI CCCAGC 4 cut(s) 456, 475, 502, 877
PspGI CCWGG 2 cut(s) 439, 977
PspN4I GGNNCC 7 cut(s) 88, 256, 411, 465, 722, 883, 916
PspPI GGNCC 5 cut(s) 143, 720, 863, 915, 975
PsuI RGATCY 1 cut(s) 409
RsaI GTAC 1 cut(s) 435
RsaNI GTAC 1 cut(s) 434
RseI CAYNNNNRTG 2 cut(s) 393, 629
SacI GAGCTC 1 cut(s) 214
SaqAI TTAA 2 cut(s) 852, 927
SatI GCNGC 9 cut(s) 27, 85, 94, 236, 296, 348, 498, 807, 810
Sau3AI GATC 3 cut(s) 190, 409, 787
Sau96I GGNCC 5 cut(s) 143, 720, 863, 915, 975
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 2 cut(s) 441, 979
SduI GDGCHC 4 cut(s) 214, 291, 483, 886
SfaNI GCATC 3 cut(s) 247, 666, 690
SfoI GGCGCC 1 cut(s) 465
SinI GGWCC 2 cut(s) 720, 915
SmiMI CAYNNNNRTG 2 cut(s) 393, 629
SmlI CTYRAG 2 cut(s) 155, 851
SmoI CTYRAG 2 cut(s) 155, 851
Sse9I AATT 2 cut(s) 731, 796
SspDI GGCGCC 1 cut(s) 463
SspMI CTAG 3 cut(s) 12, 122, 1026
SstI GAGCTC 1 cut(s) 214
StyD4I CCNGG 2 cut(s) 439, 977
StyI CCWWGG 1 cut(s) 704
TaaI ACNGT 1 cut(s) 1004
TaiI ACGT 1 cut(s) 752
TaqI TCGA 6 cut(s) 193, 222, 360, 511, 752, 845
TasI AATT 2 cut(s) 731, 796
TauI GCSGC 6 cut(s) 29, 87, 298, 500, 809, 812
TfiI GAWTC 5 cut(s) 195, 357, 658, 664, 921
Tru1I TTAA 2 cut(s) 852, 927
Tru9I TTAA 2 cut(s) 852, 927
TscAI CASTG 2 cut(s) 631, 652
TseFI GTSAC 3 cut(s) 537, 622, 647
TseI GCWGC 3 cut(s) 93, 235, 347
Tsp45I GTSAC 3 cut(s) 537, 622, 647
TspDTI ATGAA 2 cut(s) 269, 417
TspRI CASTG 2 cut(s) 631, 652
Vha464I CTTAAG 1 cut(s) 851
VpaK11BI GGWCC 2 cut(s) 720, 915
XagI CCTNNNNNAGG 1 cut(s) 131
XapI RAATTY 1 cut(s) 796
XspI CTAG 3 cut(s) 12, 122, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.