Polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11650 AT1G11650 |
| fragaria_vesca | FvH4_3g02320 |
| malus_domestica | MD10G1319600.v1.1 |
| prunus_persica | Prupe.4G022900_v2.0.a1 Prupe.4G022900_v2.0.a1 |
| pyrus_communis | pycom10g27050 |
| rosa_chinensis | RchiOBHm_Chr5g0003511 RchiOBHm_Chr5g0003531 |
| rosa_laevigata | RLG00000015982 RLG00000031149 |
| rosa_multiflora | Rmu_sc0004279.1_g000010 Rmu_sc0004279.1_g000022 Rmu_sc0009787.1_g000004 Rmu_sc0009787.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00072430 |
| rosa_rugosa | Rorug01G0486600 Rorug04G0403900 |
| rosa_samantha | Rh2AG042000 Rh2CG041400 Rh2DG041000 Rh5AG030600 Rh5AG031000 Rh5BG030100 Rh5CG033500 Rh5DG030700 |
| rosa_wichuraiana | Rw5G002850 Rw5G002890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 283 |
| Acc36I | ACCTGC | 1 cut(s) | 283 |
| AclI | AACGTT | 1 cut(s) | 90 |
| AclWI | GGATC | 1 cut(s) | 41 |
| AcuI | CTGAAG | 1 cut(s) | 225 |
| AgsI | TTSAA | 1 cut(s) | 282 |
| AluBI | AGCT | 2 cut(s) | 7, 136 |
| AluI | AGCT | 2 cut(s) | 7, 136 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| AlwI | GGATC | 1 cut(s) | 41 |
| ApeKI | GCWGC | 2 cut(s) | 4, 289 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| BbvI | GCAGC | 2 cut(s) | 16, 301 |
| BceAI | ACGGC | 1 cut(s) | 183 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BfuAI | ACCTGC | 1 cut(s) | 283 |
| BisI | GCNGC | 2 cut(s) | 5, 290 |
| BlsI | GCNGC | 2 cut(s) | 6, 291 |
| BmiI | GGNNCC | 1 cut(s) | 197 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BpmI | CTGGAG | 1 cut(s) | 8 |
| BsaI | GGTCTC | 1 cut(s) | 35 |
| Bse1I | ACTGG | 1 cut(s) | 124 |
| BseGI | GGATG | 1 cut(s) | 88 |
| BseMII | CTCAG | 1 cut(s) | 248 |
| BseNI | ACTGG | 1 cut(s) | 124 |
| BseXI | GCAGC | 2 cut(s) | 16, 301 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| Bso31I | GGTCTC | 1 cut(s) | 35 |
| Bsp143I | GATC | 2 cut(s) | 46, 100 |
| BspCNI | CTCAG | 1 cut(s) | 247 |
| BspLI | GGNNCC | 1 cut(s) | 197 |
| BspMI | ACCTGC | 1 cut(s) | 283 |
| BspPI | GGATC | 1 cut(s) | 41 |
| BspTNI | GGTCTC | 1 cut(s) | 35 |
| BsrI | ACTGG | 1 cut(s) | 124 |
| BssMI | GATC | 2 cut(s) | 46, 100 |
| Bst4CI | ACNGT | 2 cut(s) | 115, 275 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 295 |
| BstC8I | GCNNGC | 2 cut(s) | 160, 164 |
| BstDEI | CTNAG | 1 cut(s) | 234 |
| BstF5I | GGATG | 1 cut(s) | 88 |
| BstKTI | GATC | 2 cut(s) | 49, 103 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstMBI | GATC | 2 cut(s) | 46, 100 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 209, 295 |
| BstV1I | GCAGC | 2 cut(s) | 16, 301 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 88 |
| BveI | ACCTGC | 1 cut(s) | 283 |
| Cac8I | GCNNGC | 2 cut(s) | 160, 164 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 151, 186 |
| CviAII | CATG | 1 cut(s) | 143 |
| CviJI | RGCY | 5 cut(s) | 7, 123, 136, 198, 212 |
| CviKI_1 | RGCY | 5 cut(s) | 7, 123, 136, 198, 212 |
| DdeI | CTNAG | 1 cut(s) | 234 |
| DpnI | GATC | 2 cut(s) | 48, 102 |
| DpnII | GATC | 2 cut(s) | 46, 100 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| Eco31I | GGTCTC | 1 cut(s) | 35 |
| Eco57I | CTGAAG | 1 cut(s) | 225 |
| FaeI | CATG | 1 cut(s) | 146 |
| FaiI | YATR | 4 cut(s) | 12, 65, 129, 144 |
| FatI | CATG | 1 cut(s) | 142 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 290 |
| FokI | GGATG | 1 cut(s) | 95 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 290 |
| FspBI | CTAG | 1 cut(s) | 137 |
| GluI | GCNGC | 2 cut(s) | 5, 290 |
| GsuI | CTGGAG | 1 cut(s) | 8 |
| Hin1II | CATG | 1 cut(s) | 146 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 245 |
| Hpy188I | TCNGA | 3 cut(s) | 17, 237, 257 |
| Hpy188III | TCNNGA | 2 cut(s) | 25, 80 |
| Hpy8I | GTNNAC | 1 cut(s) | 245 |
| HpyAV | CCTTC | 1 cut(s) | 288 |
| HpyCH4III | ACNGT | 2 cut(s) | 115, 275 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 32, 217 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 209, 295 |
| HpyF3I | CTNAG | 1 cut(s) | 234 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| Hsp92II | CATG | 1 cut(s) | 146 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 46, 100 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| LpnPI | CCDG | 7 cut(s) | 38, 65, 137, 144, 168, 178, 278 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 301 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MaeIII | GTNAC | 2 cut(s) | 91, 269 |
| MalI | GATC | 2 cut(s) | 48, 102 |
| MboI | GATC | 2 cut(s) | 46, 100 |
| MboII | GAAGA | 1 cut(s) | 218 |
| MluCI | AATT | 1 cut(s) | 229 |
| MmeI | TCCRAC | 2 cut(s) | 52, 280 |
| MnlI | CCTC | 1 cut(s) | 202 |
| MseI | TTAA | 4 cut(s) | 147, 224, 306, 319 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 209, 295 |
| NdeII | GATC | 2 cut(s) | 46, 100 |
| NlaIII | CATG | 1 cut(s) | 146 |
| NlaIV | GGNNCC | 1 cut(s) | 197 |
| NmuCI | GTSAC | 1 cut(s) | 269 |
| PaqCI | CACCTGC | 1 cut(s) | 283 |
| PkrI | GCNGC | 2 cut(s) | 6, 291 |
| Psp1406I | AACGTT | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 197 |
| SaqAI | TTAA | 4 cut(s) | 147, 224, 306, 319 |
| SatI | GCNGC | 2 cut(s) | 5, 290 |
| Sau3AI | GATC | 2 cut(s) | 46, 100 |
| SetI | ASST | 4 cut(s) | 9, 93, 138, 297 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| Sse9I | AATT | 1 cut(s) | 229 |
| SspMI | CTAG | 1 cut(s) | 137 |
| TaaI | ACNGT | 2 cut(s) | 115, 275 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TaqII | GACCGA | 1 cut(s) | 59 |
| TasI | AATT | 1 cut(s) | 229 |
| Tru1I | TTAA | 4 cut(s) | 147, 224, 306, 319 |
| Tru9I | TTAA | 4 cut(s) | 147, 224, 306, 319 |
| TseFI | GTSAC | 1 cut(s) | 269 |
| TseI | GCWGC | 2 cut(s) | 4, 289 |
| Tsp45I | GTSAC | 1 cut(s) | 269 |
| TspDTI | ATGAA | 1 cut(s) | 131 |
| XspI | CTAG | 1 cut(s) | 137 |