Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002307

Physical Location & Seq

Genomic Coordinates Reverse (-)

22857559 .. 22859001

Gene Structure 1443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ23897

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGAAGTATGTGAAGTTGGCTTCCCATTTCTTGACAGCCAACCTCTTGAAACTCTTGTTAATTCCTATAATAGCAGTCATTGTAATTGAAGCCTCTCCAATGAATCTAGATCACATCCATCAGCTCCGACTCCAACTCCATTACAATATGGTTAGTGTCATCACTAGCTTTGCTATTCTTGTTTTGACTTCCACCATTTACATTATGACTCAACCCAGATCCGTTTACCTCGTAGACTACTCGTGCCATAAGCCCCCTAACAATTTGAAAGTGAAATACCAGAAGTTTATTAATCACTCCAGATTGACTGGGGCCTTTGATGAGTCCTCGCTCGAGTTTCAGCACAAGATTCTTGAGCAGTCTGGCCTTGGAGAGGAGACCTATCTCCCTGAAGCAATGCATTCCATTCTGTCGAGGTTGTCAATGGCGGCGGCGCGTGAGGAGGCGGAGCAGGTGATTTTTGGAGCGTTGGATAATCTATTTGCAAATACTAATGTCAATCCTAAGGACATTGGGATTCTTGTTATGAATTGTAGTCTGTTTAATCCAACTCCTTCATTATCTTCTATGATTGTTAATAAGTACAAATTGAGGGGAAGTATTAAGAGTTATAATTTGGGAGGTATGGGATGTAGTGCTGGAGTTATAGCTGTAGATCTTGCTAAGGACCTGTTGCAAGTTCAAAAGAACACATATGCAGTTGTTGTCAGCACTGAGAATATTACTCAAAATTGGTACCTTGGGAACAAGAAATCCATGTTGGTACAAAATTGTTTGTTTCGTGTGGGTGGGTCTGCGGTTTTGCTCTCGAACAAGTTATCTGATAGGTGTAGGGCTAAGTACAAGCTTGTGCATATCGTGAGGACTCATATAGGCTCTAATGATAAGGCATATAGGTGTGCTTATCAAGAGGAGGACGATGCCAGTAAACCTGGGGTTTCGTTGTCGAAGGAGCTCATGTCGATTACTAGTGTAGCACTCAAGACTAATATCACAGCTTTGCTCGGTCCTCTTATCCTACCTATAAGCGACCAACTTCTCTTCTTTGCTACTTTGCTTGCAGACAAGTTGTTCAATACGAAATTCAAGGCTTACATCCCGAATTTCAAACTCGTTTTCGATCATTTCTGCATCCATTCTGGTCGAAGGACTGTGATTAATGAGCTTGAGAAGAATTTGCAGCTTCTACCAGTTCATGTTGAGGCGTCACGAATGACACTCCATAGGTTTGGTAACACCTCCTCCAGCTCGATTTGGTATGAGTTGGCTTACACCGAGGCAAAAGGGAGGATACAAAAGGGGAACCGTGTGTGGCAGATTGCGCTCGGAAGCGGATTCAAGTGTAACAGCGTAGTCTGGGTGTCTCTCCAGAAAGTGAAACCTTCTCCTAGTAGCCCTTGGGAAGATTGCATTCATTCGTATCCAGTGCAGACAGTTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009611 GO:0009628 GO:0009698 GO:0009699 GO:0009922 GO:0009987 GO:0010345 GO:0012505 GO:0016740 GO:0016746 GO:0016747 GO:0019438 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

480

Amino Acids

53.75

Weight (kDa)

9.28

Isoelectric Point (pI)

37.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	67 - 356	4.9e-135	FAE1/Type III polyketide synthase-like protein
Chal_sti_synt_C	PF02797	369 - 439	9.4e-07	Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C	PF08541	374 - 453	4e-10	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16280 AT4G34510
fragaria_vesca	FvH4_2g08940 FvH4_2g08940
malus_domestica	MD05G1065300.v1.1 MD10G1075000.v1.1
prunus_persica	Prupe.8G096100_v2.0.a1
pyrus_communis	pycom05g05670 pycom10g05860
rosa_chinensis	RchiOBHm_Chr2g0164781 RchiOBHm_Chr6g0264551 RchiOBHm_Chr6g0266411 RchiOBHm_Chr6g0266471 RchiOBHm_Chr6g0266501
rosa_laevigata	RLG00000014100 RLG00000014245
rosa_multiflora	Rmu_co8165060.1_g000001 Rmu_sc0000578.1_g000014 Rmu_sc0000946.1_g000023 Rmu_sc0002235.1_g000037 Rmu_sc0003605.1_g000018 Rmu_sc0003859.1_g000044 Rmu_sc0008317.1_g000012
rosa_roxburghii	Rroxscaffold_175G00431910 Rroxscaffold_7G00201710
rosa_rugosa	Rorug06G0015600
rosa_samantha	Rh2BG589600 Rh2CG560200 Rh6AG133300 Rh6AG145800 Rh6AG146600 Rh6BG130800 Rh6BG146200 Rh6BG146600 Rh6CG129000 Rh6CG142700 Rh6DG116200 Rh6DG130800 Rh6DG131300
rosa_wichuraiana	Rw0G009730 Rw2G048020 Rw6G012740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	612
AarI	CACCTGC	1 cut(s)	442
Acc36I	ACCTGC	1 cut(s)	442
Acc65I	GGTACC	1 cut(s)	735
AccB1I	GGYRCC	1 cut(s)	735
AccI	GTMKAC	1 cut(s)	234
AccII	CGCG	1 cut(s)	436
AciI	CCGC	5 cut(s)	428, 431, 446, 797, 1332
AclWI	GGATC	1 cut(s)	213
AcsI	RAATTY	3 cut(s)	1082, 1102, 1174
AcuI	CTGAAG	1 cut(s)	411
AcyI	GRCGYC	1 cut(s)	1205
AfaI	GTAC	4 cut(s)	584, 737, 765, 842
AfiI	CCNNNNNNNGG	1 cut(s)	373
AgsI	TTSAA	8 cut(s)	49, 89, 268, 683, 1075, 1087, 1108, 1339
AhlI	ACTAGT	1 cut(s)	968
AjnI	CCWGG	1 cut(s)	931
AjuI	GAANNNNNNNTTGG	2 cut(s)	743, 775
AloI	GAACNNNNNNTCC	2 cut(s)	737, 769
AluBI	AGCT	9 cut(s)	124, 168, 650, 847, 955, 998, 1165, 1183, 1248
AluI	AGCT	9 cut(s)	124, 168, 650, 847, 955, 998, 1165, 1183, 1248
Alw21I	GWGCWC	1 cut(s)	957
Alw26I	GTCTC	2 cut(s)	371, 1368
AlwI	GGATC	1 cut(s)	213
Ama87I	CYCGRG	1 cut(s)	332
AoxI	GGCC	2 cut(s)	312, 364
ApeKI	GCWGC	1 cut(s)	1180
ApoI	RAATTY	3 cut(s)	1082, 1102, 1174
AseI	ATTAAT	2 cut(s)	291, 1158
Asp718I	GGTACC	1 cut(s)	735
AspLEI	GCGC	2 cut(s)	436, 1324
AspS9I	GGNCC	3 cut(s)	312, 667, 1007
AsuHPI	GGTGA	1 cut(s)	466
AvaI	CYCGRG	1 cut(s)	332
AvaII	GGWCC	2 cut(s)	667, 1007
AxyI	CCTNAGG	1 cut(s)	504
BanI	GGYRCC	1 cut(s)	735
BanII	GRGCYC	1 cut(s)	957
BauI	CACGAG	1 cut(s)	241
Bbv12I	GWGCWC	1 cut(s)	957
BbvI	GCAGC	1 cut(s)	1192
BccI	CCATC	1 cut(s)	126
BciT130I	CCWGG	1 cut(s)	933
BciVI	GTATCC	2 cut(s)	1284, 1431
BcoDI	GTCTC	2 cut(s)	371, 1368
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	5 cut(s)	107, 165, 969, 1389, 1441
BfmI	CTRYAG	1 cut(s)	651
BfuAI	ACCTGC	1 cut(s)	442
BfuI	GTATCC	2 cut(s)	1284, 1431
BglII	AGATCT	1 cut(s)	655
BisI	GCNGC	3 cut(s)	429, 432, 1181
BlsI	GCNGC	3 cut(s)	430, 433, 1182
Bme1390I	CCNGG	1 cut(s)	933
Bme18I	GGWCC	2 cut(s)	667, 1007
BmeT110I	CYCGRG	1 cut(s)	332
BmgT120I	GGNCC	3 cut(s)	312, 667, 1007
BmiI	GGNNCC	3 cut(s)	313, 737, 1304
BmrFI	CCNGG	1 cut(s)	933
BmrI	ACTGGG	1 cut(s)	318
BmsI	GCATC	2 cut(s)	910, 1140
BmuI	ACTGGG	1 cut(s)	318
BpmI	CTGGAG	4 cut(s)	283, 660, 1228, 1352
Bpu10I	CCTNAGC	1 cut(s)	663
BpuEI	CTTGAG	3 cut(s)	374, 965, 1187
BsaHI	GRCGYC	1 cut(s)	1205
BsaI	GGTCTC	1 cut(s)	371
BsaJI	CCNNGG	5 cut(s)	367, 739, 932, 1275, 1397
BsaXI	ACNNNNNCTCC	6 cut(s)	120, 150, 944, 974, 1226, 1256
Bsc4I	CCNNNNNNNGG	1 cut(s)	373
Bse1I	ACTGG	4 cut(s)	313, 924, 1190, 1424
Bse21I	CCTNAGG	1 cut(s)	504
Bse3DI	GCAATG	1 cut(s)	402
BseBI	CCWGG	1 cut(s)	933
BseDI	CCNNGG	5 cut(s)	367, 739, 932, 1275, 1397
BseGI	GGATG	4 cut(s)	114, 635, 1095, 1131
BseLI	CCNNNNNNNGG	1 cut(s)	373
BseMI	GCAATG	1 cut(s)	402
BseMII	CTCAG	1 cut(s)	705
BseNI	ACTGG	4 cut(s)	313, 924, 1190, 1424
BseRI	GAGGAG	4 cut(s)	389, 455, 926, 1231
BseXI	GCAGC	1 cut(s)	1192
Bsh1236I	CGCG	1 cut(s)	436
BshFI	GGCC	2 cut(s)	314, 366
BshNI	GGYRCC	1 cut(s)	735
BsiHKAI	GWGCWC	1 cut(s)	957
BsiHKCI	CYCGRG	1 cut(s)	332
BslI	CCNNNNNNNGG	1 cut(s)	373
BsmAI	GTCTC	2 cut(s)	371, 1368
BsmI	GAATGC	2 cut(s)	400, 1410
BsnI	GGCC	2 cut(s)	314, 366
Bso31I	GGTCTC	1 cut(s)	371
BsoBI	CYCGRG	1 cut(s)	332
Bsp1286I	GDGCHC	1 cut(s)	957
Bsp143I	GATC	4 cut(s)	109, 218, 655, 1120
BspACI	CCGC	5 cut(s)	428, 431, 446, 797, 1332
BspANI	GGCC	2 cut(s)	314, 366
BspCNI	CTCAG	1 cut(s)	706
BspFNI	CGCG	1 cut(s)	436
BspLI	GGNNCC	3 cut(s)	313, 737, 1304
BspMI	ACCTGC	1 cut(s)	442
BspPI	GGATC	1 cut(s)	213
BspT107I	GGYRCC	1 cut(s)	735
BspTNI	GGTCTC	1 cut(s)	371
BsrDI	GCAATG	1 cut(s)	402
BsrI	ACTGG	4 cut(s)	313, 924, 1190, 1424
BssECI	CCNNGG	5 cut(s)	367, 739, 932, 1275, 1397
BssMI	GATC	4 cut(s)	109, 218, 655, 1120
BssNI	GRCGYC	1 cut(s)	1205
BssSI	CACGAG	1 cut(s)	241
BssT1I	CCWWGG	3 cut(s)	367, 739, 1397
Bst2BI	CACGAG	1 cut(s)	241
Bst2UI	CCWGG	1 cut(s)	933
Bst4CI	ACNGT	3 cut(s)	1153, 1307, 1435
Bst6I	CTCTTC	1 cut(s)	1046
BstACI	GRCGYC	1 cut(s)	1205
BstC8I	GCNNGC	1 cut(s)	1059
BstDEI	CTNAG	4 cut(s)	504, 663, 714, 837
BstENI	CCTNNNNNAGG	1 cut(s)	371
BstF5I	GGATG	4 cut(s)	114, 635, 1095, 1131
BstFNI	CGCG	1 cut(s)	436
BstHHI	GCGC	2 cut(s)	436, 1324
BstKTI	GATC	4 cut(s)	112, 221, 658, 1123
BstMAI	GTCTC	2 cut(s)	371, 1368
BstMBI	GATC	4 cut(s)	109, 218, 655, 1120
BstMWI	GCNNNNNNNGC	1 cut(s)	1321
BstNI	CCWGG	1 cut(s)	933
BstSCI	CCNGG	1 cut(s)	931
BstSFI	CTRYAG	1 cut(s)	651
BstUI	CGCG	1 cut(s)	436
BstV1I	GCAGC	1 cut(s)	1192
BstX2I	RGATCY	2 cut(s)	218, 655
BstXI	CCANNNNNNTGG	1 cut(s)	1229
BstYI	RGATCY	2 cut(s)	218, 655
Bsu36I	CCTNAGG	1 cut(s)	504
BsuI	GTATCC	2 cut(s)	1284, 1431
BsuRI	GGCC	2 cut(s)	314, 366
BtsCI	GGATG	4 cut(s)	114, 635, 1095, 1131
BtsIMutI	CAGTG	2 cut(s)	711, 1431
BveI	ACCTGC	1 cut(s)	442
Cac8I	GCNNGC	1 cut(s)	1059
CfoI	GCGC	2 cut(s)	436, 1324
Cfr13I	GGNCC	3 cut(s)	312, 667, 1007
CseI	GACGC	1 cut(s)	1194
Csp6I	GTAC	4 cut(s)	583, 736, 764, 841
CviAII	CATG	3 cut(s)	757, 958, 1196
CviQI	GTAC	4 cut(s)	583, 736, 764, 841
DdeI	CTNAG	4 cut(s)	504, 663, 714, 837
DpnI	GATC	4 cut(s)	111, 220, 657, 1122
DpnII	GATC	4 cut(s)	109, 218, 655, 1120
Eam1104I	CTCTTC	1 cut(s)	1046
EarI	CTCTTC	1 cut(s)	1046
EciI	GGCGGA	1 cut(s)	461
Ecl136II	GAGCTC	1 cut(s)	955
Eco130I	CCWWGG	3 cut(s)	367, 739, 1397
Eco24I	GRGCYC	1 cut(s)	957
Eco31I	GGTCTC	1 cut(s)	371
Eco47I	GGWCC	2 cut(s)	667, 1007
Eco53kI	GAGCTC	1 cut(s)	955
Eco57I	CTGAAG	1 cut(s)	411
Eco81I	CCTNAGG	1 cut(s)	504
Eco88I	CYCGRG	1 cut(s)	332
EcoICRI	GAGCTC	1 cut(s)	955
EcoNI	CCTNNNNNAGG	1 cut(s)	371
EcoO109I	RGGNCCY	2 cut(s)	312, 667
EcoRII	CCWGG	1 cut(s)	931
EcoT14I	CCWWGG	3 cut(s)	367, 739, 1397
EcoT22I	ATGCAT	1 cut(s)	402
EcoT38I	GRGCYC	1 cut(s)	957
ErhI	CCWWGG	3 cut(s)	367, 739, 1397
FaeI	CATG	3 cut(s)	760, 961, 1199
FatI	CATG	3 cut(s)	756, 957, 1195
FauNDI	CATATG	1 cut(s)	694
FblI	GTMKAC	1 cut(s)	234
Fnu4HI	GCNGC	3 cut(s)	429, 432, 1181
FokI	GGATG	4 cut(s)	101, 642, 1082, 1118
FriOI	GRGCYC	1 cut(s)	957
Fsp4HI	GCNGC	3 cut(s)	429, 432, 1181
FspBI	CTAG	5 cut(s)	107, 165, 969, 1389, 1441
GlaI	GCGC	2 cut(s)	435, 1323
GluI	GCNGC	3 cut(s)	429, 432, 1181
GsuI	CTGGAG	4 cut(s)	283, 660, 1228, 1352
HaeIII	GGCC	2 cut(s)	314, 366
HgaI	GACGC	1 cut(s)	1194
HhaI	GCGC	2 cut(s)	436, 1324
Hin1I	GRCGYC	1 cut(s)	1205
Hin1II	CATG	3 cut(s)	760, 961, 1199
Hin6I	GCGC	2 cut(s)	434, 1322
HinP1I	GCGC	2 cut(s)	434, 1322
HindIII	AAGCTT	1 cut(s)	845
HinfI	GANTC	8 cut(s)	103, 129, 208, 323, 349, 517, 865, 1335
HphI	GGTGA	1 cut(s)	466
Hpy166II	GTNNAC	3 cut(s)	226, 235, 929
Hpy188I	TCNGA	3 cut(s)	128, 823, 1328
Hpy8I	GTNNAC	3 cut(s)	226, 235, 929
HpyAV	CCTTC	4 cut(s)	564, 943, 1140, 1392
HpyCH4III	ACNGT	3 cut(s)	1153, 1307, 1435
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1321
HpyF3I	CTNAG	4 cut(s)	504, 663, 714, 837
Hsp92I	GRCGYC	1 cut(s)	1205
Hsp92II	CATG	3 cut(s)	760, 961, 1199
HspAI	GCGC	2 cut(s)	434, 1322
KpnI	GGTACC	1 cut(s)	739
Kzo9I	GATC	4 cut(s)	109, 218, 655, 1120
LmnI	GCTCC	4 cut(s)	129, 448, 464, 952
Lsp1109I	GCAGC	1 cut(s)	1192
LweI	GCATC	2 cut(s)	910, 1140
MaeI	CTAG	5 cut(s)	107, 165, 969, 1389, 1441
MaeIII	GTNAC	3 cut(s)	1206, 1232, 1343
MalI	GATC	4 cut(s)	111, 220, 657, 1122
MboI	GATC	4 cut(s)	109, 218, 655, 1120
MboII	GAAGA	4 cut(s)	555, 1033, 1183, 1415
MflI	RGATCY	2 cut(s)	218, 655
MhlI	GDGCHC	1 cut(s)	957
MlyI	GAGTC	4 cut(s)	123, 202, 332, 859
MmeI	TCCRAC	4 cut(s)	151, 157, 450, 572
Mph1103I	ATGCAT	1 cut(s)	402
MseI	TTAA	6 cut(s)	59, 291, 543, 576, 603, 1158
MslI	CAYNNNNRTG	1 cut(s)	895
MspR9I	CCNGG	1 cut(s)	933
Mva1269I	GAATGC	2 cut(s)	400, 1410
MvaI	CCWGG	1 cut(s)	933
MvnI	CGCG	1 cut(s)	436
MwoI	GCNNNNNNNGC	1 cut(s)	1321
NdeI	CATATG	1 cut(s)	694
NdeII	GATC	4 cut(s)	109, 218, 655, 1120
NlaIII	CATG	3 cut(s)	760, 961, 1199
NlaIV	GGNNCC	3 cut(s)	313, 737, 1304
NmuCI	GTSAC	1 cut(s)	1206
NsiI	ATGCAT	1 cut(s)	402
PaeR7I	CTCGAG	1 cut(s)	332
PaqCI	CACCTGC	1 cut(s)	442
PctI	GAATGC	2 cut(s)	400, 1410
PfeI	GAWTC	4 cut(s)	103, 349, 517, 1335
PkrI	GCNGC	3 cut(s)	430, 433, 1182
PleI	GAGTC	4 cut(s)	123, 202, 331, 859
PpsI	GAGTC	4 cut(s)	123, 202, 331, 859
PpuMI	RGGWCCY	1 cut(s)	667
PshBI	ATTAAT	2 cut(s)	291, 1158
PsiI	TTATAA	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	957
Psp5II	RGGWCCY	1 cut(s)	667
Psp6I	CCWGG	1 cut(s)	931
PspGI	CCWGG	1 cut(s)	931
PspN4I	GGNNCC	3 cut(s)	313, 737, 1304
PspPI	GGNCC	3 cut(s)	312, 667, 1007
PspPPI	RGGWCCY	1 cut(s)	667
PspXI	VCTCGAGB	1 cut(s)	332
PsuI	RGATCY	2 cut(s)	218, 655
RsaI	GTAC	4 cut(s)	584, 737, 765, 842
RsaNI	GTAC	4 cut(s)	583, 736, 764, 841
RseI	CAYNNNNRTG	1 cut(s)	895
SacI	GAGCTC	1 cut(s)	957
SaqAI	TTAA	6 cut(s)	59, 291, 543, 576, 603, 1158
SatI	GCNGC	3 cut(s)	429, 432, 1181
Sau3AI	GATC	4 cut(s)	109, 218, 655, 1120
Sau96I	GGNCC	3 cut(s)	312, 667, 1007
SchI	GAGTC	4 cut(s)	123, 202, 332, 859
ScrFI	CCNGG	1 cut(s)	933
SduI	GDGCHC	1 cut(s)	957
SfaNI	GCATC	2 cut(s)	910, 1140
SfcI	CTRYAG	1 cut(s)	651
Sfr274I	CTCGAG	1 cut(s)	332
SinI	GGWCC	2 cut(s)	667, 1007
SlaI	CTCGAG	1 cut(s)	332
SmiMI	CAYNNNNRTG	1 cut(s)	895
SmlI	CTYRAG	4 cut(s)	332, 353, 980, 1166
SmoI	CTYRAG	4 cut(s)	332, 353, 980, 1166
SpeI	ACTAGT	1 cut(s)	968
SsiI	CCGC	5 cut(s)	428, 431, 446, 797, 1332
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	5 cut(s)	107, 165, 969, 1389, 1441
SstI	GAGCTC	1 cut(s)	957
StyD4I	CCNGG	1 cut(s)	931
StyI	CCWWGG	3 cut(s)	367, 739, 1397
TaaI	ACNGT	3 cut(s)	1153, 1307, 1435
TaqI	TCGA	8 cut(s)	333, 413, 809, 947, 962, 1119, 1144, 1250
TaqII	GACCGA	1 cut(s)	995
TatI	WGTACW	2 cut(s)	582, 840
TauI	GCSGC	2 cut(s)	431, 434
TfiI	GAWTC	4 cut(s)	103, 349, 517, 1335
Tru1I	TTAA	6 cut(s)	59, 291, 543, 576, 603, 1158
Tru9I	TTAA	6 cut(s)	59, 291, 543, 576, 603, 1158
TscAI	CASTG	2 cut(s)	718, 1431
TseFI	GTSAC	1 cut(s)	1206
TseI	GCWGC	1 cut(s)	1180
Tsp45I	GTSAC	1 cut(s)	1206
TspDTI	ATGAA	6 cut(s)	17, 116, 542, 546, 1184, 1403
TspGWI	ACGGA	1 cut(s)	211
TspRI	CASTG	2 cut(s)	718, 1431
VpaK11BI	GGWCC	2 cut(s)	667, 1007
VspI	ATTAAT	2 cut(s)	291, 1158
XagI	CCTNNNNNAGG	1 cut(s)	371
XapI	RAATTY	3 cut(s)	1082, 1102, 1174
XbaI	TCTAGA	1 cut(s)	106
XhoI	CTCGAG	1 cut(s)	332
XmiI	GTMKAC	1 cut(s)	234
XspI	CTAG	5 cut(s)	107, 165, 969, 1389, 1441
Zsp2I	ATGCAT	1 cut(s)	402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.