3-ketoacyl-CoA synthase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16280 AT4G34510 |
| fragaria_vesca | FvH4_2g08940 FvH4_2g08940 |
| malus_domestica | MD05G1065300.v1.1 MD10G1075000.v1.1 |
| prunus_persica | Prupe.8G096100_v2.0.a1 |
| pyrus_communis | pycom05g05670 pycom10g05860 |
| rosa_chinensis | RchiOBHm_Chr2g0164781 RchiOBHm_Chr6g0264551 RchiOBHm_Chr6g0266411 RchiOBHm_Chr6g0266471 RchiOBHm_Chr6g0266501 |
| rosa_laevigata | RLG00000014100 RLG00000014245 |
| rosa_multiflora | Rmu_co8165060.1_g000001 Rmu_sc0000578.1_g000014 Rmu_sc0000946.1_g000023 Rmu_sc0002235.1_g000037 Rmu_sc0003605.1_g000018 Rmu_sc0003859.1_g000044 Rmu_sc0008317.1_g000012 |
| rosa_roxburghii | Rroxscaffold_175G00431910 Rroxscaffold_7G00201710 |
| rosa_rugosa | Rorug06G0015600 |
| rosa_samantha | Rh2BG589600 Rh2CG560200 Rh6AG133300 Rh6AG145800 Rh6AG146600 Rh6BG130800 Rh6BG146200 Rh6BG146600 Rh6CG129000 Rh6CG142700 Rh6DG116200 Rh6DG130800 Rh6DG131300 |
| rosa_wichuraiana | Rw0G009730 Rw2G048020 Rw6G012740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| AarI | CACCTGC | 1 cut(s) | 343 |
| Acc36I | ACCTGC | 1 cut(s) | 343 |
| Acc65I | GGTACC | 1 cut(s) | 636 |
| AccB1I | GGYRCC | 1 cut(s) | 636 |
| AccI | GTMKAC | 1 cut(s) | 135 |
| AccII | CGCG | 1 cut(s) | 337 |
| AciI | CCGC | 5 cut(s) | 259, 329, 347, 698, 1233 |
| AclWI | GGATC | 1 cut(s) | 114 |
| AcsI | RAATTY | 3 cut(s) | 430, 1003, 1075 |
| AcuI | CTGAAG | 1 cut(s) | 312 |
| AcyI | GRCGYC | 1 cut(s) | 1106 |
| AfaI | GTAC | 4 cut(s) | 485, 638, 666, 743 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 274, 312 |
| AflII | CTTAAG | 1 cut(s) | 254 |
| AgsI | TTSAA | 4 cut(s) | 584, 976, 1009, 1240 |
| AjnI | CCWGG | 1 cut(s) | 832 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 644, 676 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 638, 670 |
| Alw21I | GWGCWC | 1 cut(s) | 858 |
| Alw26I | GTCTC | 1 cut(s) | 272 |
| AlwI | GGATC | 1 cut(s) | 114 |
| Ama87I | CYCGRG | 1 cut(s) | 233 |
| AoxI | GGCC | 2 cut(s) | 213, 265 |
| ApeKI | GCWGC | 2 cut(s) | 332, 1081 |
| ApoI | RAATTY | 3 cut(s) | 430, 1003, 1075 |
| AseI | ATTAAT | 2 cut(s) | 192, 1059 |
| Asp718I | GGTACC | 1 cut(s) | 636 |
| AspLEI | GCGC | 2 cut(s) | 337, 1225 |
| AspS9I | GGNCC | 2 cut(s) | 213, 908 |
| AsuHPI | GGTGA | 1 cut(s) | 367 |
| AvaI | CYCGRG | 1 cut(s) | 233 |
| AvaII | GGWCC | 1 cut(s) | 908 |
| AxyI | CCTNAGG | 1 cut(s) | 405 |
| BanI | GGYRCC | 1 cut(s) | 636 |
| BanII | GRGCYC | 1 cut(s) | 858 |
| BauI | CACGAG | 1 cut(s) | 142 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 858 |
| BbvI | GCAGC | 2 cut(s) | 344, 1093 |
| BciT130I | CCWGG | 1 cut(s) | 834 |
| BciVI | GTATCC | 2 cut(s) | 1185, 1332 |
| BcoDI | GTCTC | 1 cut(s) | 272 |
| BfaI | CTAG | 4 cut(s) | 8, 66, 435, 1342 |
| BfmI | CTRYAG | 1 cut(s) | 552 |
| BfrI | CTTAAG | 1 cut(s) | 254 |
| BfuAI | ACCTGC | 1 cut(s) | 343 |
| BfuI | GTATCC | 2 cut(s) | 1185, 1332 |
| BglII | AGATCT | 1 cut(s) | 556 |
| BisI | GCNGC | 3 cut(s) | 330, 333, 1082 |
| BlpI | GCTNAGC | 1 cut(s) | 564 |
| BlsI | GCNGC | 3 cut(s) | 331, 334, 1083 |
| Bme1390I | CCNGG | 1 cut(s) | 834 |
| Bme18I | GGWCC | 1 cut(s) | 908 |
| BmeT110I | CYCGRG | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 2 cut(s) | 213, 908 |
| BmiI | GGNNCC | 3 cut(s) | 214, 638, 1205 |
| BmrFI | CCNGG | 1 cut(s) | 834 |
| BmsI | GCATC | 2 cut(s) | 811, 1041 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpmI | CTGGAG | 4 cut(s) | 184, 561, 1129, 1253 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 564 |
| BpuEI | CTTGAG | 2 cut(s) | 866, 1088 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1320 |
| BsaHI | GRCGYC | 1 cut(s) | 1106 |
| BsaI | GGTCTC | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 6 cut(s) | 268, 311, 640, 833, 1176, 1298 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 21, 51, 1127, 1157 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 274, 312 |
| Bse1I | ACTGG | 2 cut(s) | 1091, 1325 |
| Bse21I | CCTNAGG | 1 cut(s) | 405 |
| Bse3DI | GCAATG | 2 cut(s) | 303, 945 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1320 |
| BseBI | CCWGG | 1 cut(s) | 834 |
| BseDI | CCNNGG | 6 cut(s) | 268, 311, 640, 833, 1176, 1298 |
| BseGI | GGATG | 5 cut(s) | 536, 823, 996, 1032, 1119 |
| BseJI | GATNNNNATC | 1 cut(s) | 1320 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 274, 312 |
| BseMI | GCAATG | 2 cut(s) | 303, 945 |
| BseMII | CTCAG | 1 cut(s) | 606 |
| BseNI | ACTGG | 2 cut(s) | 1091, 1325 |
| BseRI | GAGGAG | 3 cut(s) | 356, 827, 1132 |
| BseXI | GCAGC | 2 cut(s) | 344, 1093 |
| Bsh1236I | CGCG | 1 cut(s) | 337 |
| BshFI | GGCC | 2 cut(s) | 215, 267 |
| BshNI | GGYRCC | 1 cut(s) | 636 |
| BsiHKAI | GWGCWC | 1 cut(s) | 858 |
| BsiHKCI | CYCGRG | 1 cut(s) | 233 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 274, 312 |
| BsmAI | GTCTC | 1 cut(s) | 272 |
| BsnI | GGCC | 2 cut(s) | 215, 267 |
| Bso31I | GGTCTC | 1 cut(s) | 272 |
| BsoBI | CYCGRG | 1 cut(s) | 233 |
| Bsp1286I | GDGCHC | 1 cut(s) | 858 |
| Bsp143I | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 564 |
| BspACI | CCGC | 5 cut(s) | 259, 329, 347, 698, 1233 |
| BspANI | GGCC | 2 cut(s) | 215, 267 |
| BspCNI | CTCAG | 1 cut(s) | 607 |
| BspFNI | CGCG | 1 cut(s) | 337 |
| BspHI | TCATGA | 1 cut(s) | 759 |
| BspLI | GGNNCC | 3 cut(s) | 214, 638, 1205 |
| BspMI | ACCTGC | 1 cut(s) | 343 |
| BspPI | GGATC | 1 cut(s) | 114 |
| BspT107I | GGYRCC | 1 cut(s) | 636 |
| BspTI | CTTAAG | 1 cut(s) | 254 |
| BspTNI | GGTCTC | 1 cut(s) | 272 |
| BsrDI | GCAATG | 2 cut(s) | 303, 945 |
| BsrI | ACTGG | 2 cut(s) | 1091, 1325 |
| BssECI | CCNNGG | 6 cut(s) | 268, 311, 640, 833, 1176, 1298 |
| BssMI | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| BssNI | GRCGYC | 1 cut(s) | 1106 |
| BssSI | CACGAG | 1 cut(s) | 142 |
| BssT1I | CCWWGG | 3 cut(s) | 268, 640, 1298 |
| Bst2BI | CACGAG | 1 cut(s) | 142 |
| Bst2UI | CCWGG | 1 cut(s) | 834 |
| Bst4CI | ACNGT | 2 cut(s) | 1208, 1336 |
| Bst6I | CTCTTC | 1 cut(s) | 947 |
| BstACI | GRCGYC | 1 cut(s) | 1106 |
| BstAFI | CTTAAG | 1 cut(s) | 254 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 574 |
| BstDEI | CTNAG | 4 cut(s) | 405, 564, 615, 738 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 272 |
| BstF5I | GGATG | 5 cut(s) | 536, 823, 996, 1032, 1119 |
| BstFNI | CGCG | 1 cut(s) | 337 |
| BstHHI | GCGC | 2 cut(s) | 337, 1225 |
| BstKTI | GATC | 4 cut(s) | 122, 210, 559, 1024 |
| BstMAI | GTCTC | 1 cut(s) | 272 |
| BstMBI | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 574, 875, 1222 |
| BstNI | CCWGG | 1 cut(s) | 834 |
| BstSCI | CCNGG | 1 cut(s) | 832 |
| BstSFI | CTRYAG | 1 cut(s) | 552 |
| BstUI | CGCG | 1 cut(s) | 337 |
| BstV1I | GCAGC | 2 cut(s) | 344, 1093 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| BstX2I | RGATCY | 2 cut(s) | 119, 556 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1043, 1130 |
| BstYI | RGATCY | 2 cut(s) | 119, 556 |
| Bsu36I | CCTNAGG | 1 cut(s) | 405 |
| BsuI | GTATCC | 2 cut(s) | 1185, 1332 |
| BsuRI | GGCC | 2 cut(s) | 215, 267 |
| BtsCI | GGATG | 5 cut(s) | 536, 823, 996, 1032, 1119 |
| BtsIMutI | CAGTG | 2 cut(s) | 612, 1332 |
| BveI | ACCTGC | 1 cut(s) | 343 |
| CciI | TCATGA | 1 cut(s) | 759 |
| CfoI | GCGC | 2 cut(s) | 337, 1225 |
| Cfr13I | GGNCC | 2 cut(s) | 213, 908 |
| CseI | GACGC | 1 cut(s) | 1095 |
| Csp6I | GTAC | 4 cut(s) | 484, 637, 665, 742 |
| CviAII | CATG | 6 cut(s) | 247, 658, 760, 859, 1037, 1097 |
| CviQI | GTAC | 4 cut(s) | 484, 637, 665, 742 |
| DdeI | CTNAG | 4 cut(s) | 405, 564, 615, 738 |
| DpnI | GATC | 4 cut(s) | 121, 209, 558, 1023 |
| DpnII | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| Eam1104I | CTCTTC | 1 cut(s) | 947 |
| EarI | CTCTTC | 1 cut(s) | 947 |
| EciI | GGCGGA | 1 cut(s) | 362 |
| Ecl136II | GAGCTC | 1 cut(s) | 856 |
| Eco130I | CCWWGG | 3 cut(s) | 268, 640, 1298 |
| Eco24I | GRGCYC | 1 cut(s) | 858 |
| Eco31I | GGTCTC | 1 cut(s) | 272 |
| Eco47I | GGWCC | 1 cut(s) | 908 |
| Eco53kI | GAGCTC | 1 cut(s) | 856 |
| Eco57I | CTGAAG | 1 cut(s) | 312 |
| Eco81I | CCTNAGG | 1 cut(s) | 405 |
| Eco88I | CYCGRG | 1 cut(s) | 233 |
| EcoICRI | GAGCTC | 1 cut(s) | 856 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 272 |
| EcoO109I | RGGNCCY | 1 cut(s) | 213 |
| EcoRI | GAATTC | 1 cut(s) | 430 |
| EcoRII | CCWGG | 1 cut(s) | 832 |
| EcoT14I | CCWWGG | 3 cut(s) | 268, 640, 1298 |
| EcoT38I | GRGCYC | 1 cut(s) | 858 |
| ErhI | CCWWGG | 3 cut(s) | 268, 640, 1298 |
| FaeI | CATG | 6 cut(s) | 250, 661, 763, 862, 1040, 1100 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 285, 317 |
| FatI | CATG | 6 cut(s) | 246, 657, 759, 858, 1036, 1096 |
| FblI | GTMKAC | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 3 cut(s) | 330, 333, 1082 |
| FokI | GGATG | 5 cut(s) | 543, 830, 983, 1019, 1126 |
| FriOI | GRGCYC | 1 cut(s) | 858 |
| Fsp4HI | GCNGC | 3 cut(s) | 330, 333, 1082 |
| FspBI | CTAG | 4 cut(s) | 8, 66, 435, 1342 |
| GlaI | GCGC | 2 cut(s) | 336, 1224 |
| GluI | GCNGC | 3 cut(s) | 330, 333, 1082 |
| GsuI | CTGGAG | 4 cut(s) | 184, 561, 1129, 1253 |
| HaeIII | GGCC | 2 cut(s) | 215, 267 |
| HgaI | GACGC | 1 cut(s) | 1095 |
| HhaI | GCGC | 2 cut(s) | 337, 1225 |
| Hin1I | GRCGYC | 1 cut(s) | 1106 |
| Hin1II | CATG | 6 cut(s) | 250, 661, 763, 862, 1040, 1100 |
| Hin6I | GCGC | 2 cut(s) | 335, 1223 |
| HinP1I | GCGC | 2 cut(s) | 335, 1223 |
| HindIII | AAGCTT | 1 cut(s) | 746 |
| HinfI | GANTC | 8 cut(s) | 4, 30, 109, 224, 250, 418, 766, 1236 |
| HphI | GGTGA | 1 cut(s) | 367 |
| Hpy166II | GTNNAC | 3 cut(s) | 13, 127, 136 |
| Hpy188I | TCNGA | 4 cut(s) | 29, 315, 724, 1229 |
| Hpy188III | TCNNGA | 7 cut(s) | 201, 709, 760, 809, 883, 1000, 1270 |
| Hpy8I | GTNNAC | 3 cut(s) | 13, 127, 136 |
| HpyAV | CCTTC | 4 cut(s) | 465, 844, 1041, 1293 |
| HpyCH4III | ACNGT | 2 cut(s) | 1208, 1336 |
| HpyCH4V | TGCA | 8 cut(s) | 386, 577, 599, 754, 1032, 1081, 1311, 1330 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 574, 875, 1222 |
| HpyF3I | CTNAG | 4 cut(s) | 405, 564, 615, 738 |
| Hsp92I | GRCGYC | 1 cut(s) | 1106 |
| Hsp92II | CATG | 6 cut(s) | 250, 661, 763, 862, 1040, 1100 |
| HspAI | GCGC | 2 cut(s) | 335, 1223 |
| KpnI | GGTACC | 1 cut(s) | 640 |
| Kzo9I | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| LmnI | GCTCC | 4 cut(s) | 30, 349, 365, 853 |
| Lsp1109I | GCAGC | 2 cut(s) | 344, 1093 |
| LweI | GCATC | 2 cut(s) | 811, 1041 |
| MaeI | CTAG | 4 cut(s) | 8, 66, 435, 1342 |
| MaeIII | GTNAC | 3 cut(s) | 622, 1107, 1133 |
| MalI | GATC | 4 cut(s) | 121, 209, 558, 1023 |
| MboI | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| MboII | GAAGA | 4 cut(s) | 456, 934, 1084, 1316 |
| MfeI | CAATTG | 1 cut(s) | 163 |
| MflI | RGATCY | 2 cut(s) | 119, 556 |
| MhlI | GDGCHC | 1 cut(s) | 858 |
| MluCI | AATT | 8 cut(s) | 163, 430, 488, 514, 631, 670, 1003, 1075 |
| MlyI | GAGTC | 4 cut(s) | 24, 103, 233, 760 |
| MmeI | TCCRAC | 4 cut(s) | 52, 58, 351, 473 |
| MseI | TTAA | 6 cut(s) | 192, 255, 444, 477, 504, 1059 |
| MslI | CAYNNNNRTG | 2 cut(s) | 796, 1041 |
| MspCI | CTTAAG | 1 cut(s) | 254 |
| MspR9I | CCNGG | 1 cut(s) | 834 |
| MunI | CAATTG | 1 cut(s) | 163 |
| MvaI | CCWGG | 1 cut(s) | 834 |
| MvnI | CGCG | 1 cut(s) | 337 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 574, 875, 1222 |
| NdeII | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| NlaIII | CATG | 6 cut(s) | 250, 661, 763, 862, 1040, 1100 |
| NlaIV | GGNNCC | 3 cut(s) | 214, 638, 1205 |
| NmuCI | GTSAC | 1 cut(s) | 1107 |
| PaeR7I | CTCGAG | 1 cut(s) | 233 |
| PagI | TCATGA | 1 cut(s) | 759 |
| PaqCI | CACCTGC | 1 cut(s) | 343 |
| PfeI | GAWTC | 4 cut(s) | 4, 250, 418, 1236 |
| PkrI | GCNGC | 3 cut(s) | 331, 334, 1083 |
| PleI | GAGTC | 4 cut(s) | 24, 103, 232, 760 |
| PpsI | GAGTC | 4 cut(s) | 24, 103, 232, 760 |
| PshBI | ATTAAT | 2 cut(s) | 192, 1059 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| Psp124BI | GAGCTC | 1 cut(s) | 858 |
| Psp6I | CCWGG | 1 cut(s) | 832 |
| PspGI | CCWGG | 1 cut(s) | 832 |
| PspN4I | GGNNCC | 3 cut(s) | 214, 638, 1205 |
| PspPI | GGNCC | 2 cut(s) | 213, 908 |
| PspXI | VCTCGAGB | 1 cut(s) | 233 |
| PsuI | RGATCY | 2 cut(s) | 119, 556 |
| RsaI | GTAC | 4 cut(s) | 485, 638, 666, 743 |
| RsaNI | GTAC | 4 cut(s) | 484, 637, 665, 742 |
| RseI | CAYNNNNRTG | 2 cut(s) | 796, 1041 |
| SacI | GAGCTC | 1 cut(s) | 858 |
| SaqAI | TTAA | 6 cut(s) | 192, 255, 444, 477, 504, 1059 |
| SatI | GCNGC | 3 cut(s) | 330, 333, 1082 |
| Sau3AI | GATC | 4 cut(s) | 119, 207, 556, 1021 |
| Sau96I | GGNCC | 2 cut(s) | 213, 908 |
| SchI | GAGTC | 4 cut(s) | 24, 103, 233, 760 |
| ScrFI | CCNGG | 1 cut(s) | 834 |
| SduI | GDGCHC | 1 cut(s) | 858 |
| SfaNI | GCATC | 2 cut(s) | 811, 1041 |
| SfcI | CTRYAG | 1 cut(s) | 552 |
| Sfr274I | CTCGAG | 1 cut(s) | 233 |
| SinI | GGWCC | 1 cut(s) | 908 |
| SlaI | CTCGAG | 1 cut(s) | 233 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 796, 1041 |
| SmlI | CTYRAG | 4 cut(s) | 233, 254, 881, 1067 |
| SmoI | CTYRAG | 4 cut(s) | 233, 254, 881, 1067 |
| Sse9I | AATT | 8 cut(s) | 163, 430, 488, 514, 631, 670, 1003, 1075 |
| SsiI | CCGC | 5 cut(s) | 259, 329, 347, 698, 1233 |
| SspMI | CTAG | 4 cut(s) | 8, 66, 435, 1342 |
| SstI | GAGCTC | 1 cut(s) | 858 |
| StyD4I | CCNGG | 1 cut(s) | 832 |
| StyI | CCWWGG | 3 cut(s) | 268, 640, 1298 |
| TaaI | ACNGT | 2 cut(s) | 1208, 1336 |
| TaqI | TCGA | 6 cut(s) | 112, 234, 710, 848, 1020, 1151 |
| TaqII | GACCGA | 1 cut(s) | 896 |
| TasI | AATT | 8 cut(s) | 163, 430, 488, 514, 631, 670, 1003, 1075 |
| TatI | WGTACW | 2 cut(s) | 483, 741 |
| TauI | GCSGC | 1 cut(s) | 332 |
| TfiI | GAWTC | 4 cut(s) | 4, 250, 418, 1236 |
| Tru1I | TTAA | 6 cut(s) | 192, 255, 444, 477, 504, 1059 |
| Tru9I | TTAA | 6 cut(s) | 192, 255, 444, 477, 504, 1059 |
| TscAI | CASTG | 2 cut(s) | 619, 1332 |
| TseFI | GTSAC | 1 cut(s) | 1107 |
| TseI | GCWGC | 2 cut(s) | 332, 1081 |
| Tsp45I | GTSAC | 1 cut(s) | 1107 |
| TspDTI | ATGAA | 6 cut(s) | 8, 17, 443, 447, 934, 1085 |
| TspGWI | ACGGA | 2 cut(s) | 112, 1126 |
| TspRI | CASTG | 2 cut(s) | 619, 1332 |
| Vha464I | CTTAAG | 1 cut(s) | 254 |
| VpaK11BI | GGWCC | 1 cut(s) | 908 |
| VspI | ATTAAT | 2 cut(s) | 192, 1059 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 272 |
| XapI | RAATTY | 3 cut(s) | 430, 1003, 1075 |
| XhoI | CTCGAG | 1 cut(s) | 233 |
| XmiI | GTMKAC | 1 cut(s) | 135 |
| XspI | CTAG | 4 cut(s) | 8, 66, 435, 1342 |