Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003932

Physical Location & Seq

Genomic Coordinates Reverse (-)

9952253 .. 9953308

Gene Structure 1056 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17075

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGGACCGAGAGTGGGGTTCAAAGCCCGGAGGTGGAGGCGCCGTCTCCGCCCAGAACGAAGCCATCGACCGCCGCGAGCGACTCCGACGACTTGCCCTCGAGACCATTGATCTCGCCAAAGATCCATACTTCATGCGCAATCACCTCGGAAGCTATGAGTGTAAACTTTGCTTGACCTTGCACAACAATGAGGGTAACTACTTGGCCCATACACAGGGAAAGCGCCACCAGACCTATCTCGCCAAGCGGGCCGCGCGTGAGGCCAACGATATTCCTACTCAGCCCCAGTCCCACAAGCGCAAAGTCTCCATTCGCAAAACAGTGAAAATTGGTAGGCCGGGCTATAGAGTAACAAAGCAGTTTGATGGAGAGACAAAGCAAAGGTCTCTTCTCTTCCAGATTGAGTATCCGGAAATAGAAGATAATGCAAAGCCAAGGCATCGTTTTATGTCATCTTATGAGCAGAGGGTCCAACCCTATGAGAAAAGATACCAGTATCTTCTGTTTGCAGCCGAACCATACGAGATAGTTGCTTTTAAGGTTCCTAGTACAGAGATTGACAAATCGACTCCGAAGTTCTTCTCACACCGGGATCCAGACTCCAAAATGTTCACGTTGCAGCTATATTTCAAAGTTAAGCCACCAGAGACGAACAAACCTCAACCTCCCCCAAATGCCATTGGCACAGGTGCCCCTGGAGTTCCTTCAAGGCCTCTACCCCCACCACCCCGAGGTCCACCTCCTCCTCCTCTACAAGGAATGGAGCCTAGTGCACCTATGGGAAACCCTCCTAGAGCTCTTCCAACTATTCCTGGTTCCTTACTGCCACCTCCTCTTATGGTAAATGGCCCTGGGCCTATGCCTCCTGGTGGGGCTCCACCTGCCCCACCTCCACCTCCTGTCAGCAATAACACAATGGTGAATTTCACTCTTGGTATCCAGGTGGGTAGACCACCGACTATGCCACCTCCACCACAAGGTTTCCAAGGACAACAGATGCAGGGCCAGGGTCTTCGTCCTCCTCCTCTTCCTACACCTCCTAGCATGGGTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010720 GO:0010975 GO:0010976 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022008 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030532 GO:0031344 GO:0031346 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046483 GO:0048518 GO:0048522 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051960 GO:0051962 GO:0060284 GO:0065003 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120035 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3A2 zf-met

Protein Analysis

351

Amino Acids

38.93

Weight (kDa)

9.94

Isoelectric Point (pI)

59.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	52 - 76	1.2e-06	Zinc-finger of C2H2 type
SF3A2	PF16835	110 - 204	2.4e-34	Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32600
fragaria_vesca	FvH4_6g16880 FvH4_6g16880 FvH4_6g16880 FvH4_6g16880
malus_domestica	MD04G1088800.v1.1 MD12G1106500.v1.1
prunus_persica	Prupe.4G071900_v2.0.a1 Prupe.7G125300_v2.0.a1 Prupe.7G125300_v2.0.a1
pyrus_communis	pycom04g08310 pycom12g10700
rosa_chinensis	RchiOBHm_Chr3g0470901 RchiOBHm_Chr7g0191101
rosa_laevigata	RLG00000024235 RLG00000025908
rosa_multiflora	Rmu_co8030388.1_g000001 Rmu_sc0005903.1_g000001 Rmu_sc0010267.1_g000002 Rmu_sc0030335.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264030 Rroxscaffold_6G00410430 Rroxscaffold_6G00426670
rosa_rugosa	Rorug03G0113500 Rorug06G0508500
rosa_samantha	Rh1AG146000 Rh1DG152700 Rh3AG163300 Rh3BG188700 Rh3CG178700 Rh3DG187400 Rh7BG118500 Rh7CG121000
rosa_wichuraiana	Rw3G015380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	889
Acc16I	TGCGCA	1 cut(s)	137
Acc36I	ACCTGC	1 cut(s)	889
AccB1I	GGYRCC	2 cut(s)	38, 689
AccI	GTMKAC	1 cut(s)	949
AccII	CGCG	3 cut(s)	75, 254, 256
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	5 cut(s)	48, 70, 73, 247, 252
AclWI	GGATC	3 cut(s)	116, 587, 600
AcsI	RAATTY	1 cut(s)	922
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	1 cut(s)	550
AfiI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 731, 755, 869, 977, 1046
AgsI	TTSAA	3 cut(s)	21, 631, 708
AjnI	CCWGG	6 cut(s)	694, 811, 850, 865, 939, 1005
AleI	CACNNNNGTG	1 cut(s)	917
AluBI	AGCT	3 cut(s)	153, 622, 797
AluI	AGCT	3 cut(s)	153, 622, 797
Alw21I	GWGCWC	2 cut(s)	775, 799
Alw26I	GTCTC	6 cut(s)	49, 95, 310, 365, 390, 641
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	3 cut(s)	116, 587, 600
Ama87I	CYCGRG	2 cut(s)	98, 729
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	8 cut(s)	204, 249, 261, 335, 710, 847, 854, 1003
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	2 cut(s)	509, 619
ApoI	RAATTY	1 cut(s)	922
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
Asp700I	GAANNNNTTC	1 cut(s)	578
AspLEI	GCGC	5 cut(s)	41, 138, 225, 256, 300
AspS9I	GGNCC	8 cut(s)	4, 205, 249, 469, 734, 848, 854, 1003
AsuC2I	CCSGG	3 cut(s)	27, 339, 590
AsuHPI	GGTGA	2 cut(s)	134, 931
AvaI	CYCGRG	2 cut(s)	98, 729
AvaII	GGWCC	3 cut(s)	4, 469, 734
BaeGI	GKGCMC	2 cut(s)	694, 775
BamHI	GGATCC	1 cut(s)	592
BanI	GGYRCC	2 cut(s)	38, 689
BanII	GRGCYC	2 cut(s)	799, 877
BbsI	GAAGAC	1 cut(s)	1004
Bbv12I	GWGCWC	2 cut(s)	775, 799
BbvI	GCAGC	2 cut(s)	521, 631
BccI	CCATC	2 cut(s)	71, 359
BceAI	ACGGC	1 cut(s)	26
BcgI	CGANNNNNNTGC	4 cut(s)	127, 161, 512, 546
BciT130I	CCWGG	6 cut(s)	696, 813, 852, 867, 941, 1007
BciVI	GTATCC	2 cut(s)	417, 947
BcnI	CCSGG	3 cut(s)	27, 339, 590
BcoDI	GTCTC	6 cut(s)	49, 95, 310, 365, 390, 641
BfaI	CTAG	4 cut(s)	546, 768, 792, 1041
BfmI	CTRYAG	1 cut(s)	343
BfoI	RGCGCY	2 cut(s)	42, 226
BfuAI	ACCTGC	1 cut(s)	889
BfuI	GTATCC	2 cut(s)	417, 947
BglI	GCCNNNNNGGC	1 cut(s)	248
BisI	GCNGC	4 cut(s)	73, 252, 510, 620
BlsI	GCNGC	4 cut(s)	74, 253, 511, 621
Bme1390I	CCNGG	9 cut(s)	27, 339, 590, 696, 813, 852, 867, 941, 1007
Bme18I	GGWCC	3 cut(s)	4, 469, 734
BmeT110I	CYCGRG	2 cut(s)	98, 729
BmgT120I	GGNCC	8 cut(s)	4, 205, 249, 469, 734, 848, 854, 1003
BmiI	GGNNCC	8 cut(s)	40, 470, 543, 594, 691, 765, 817, 876
BmrFI	CCNGG	9 cut(s)	27, 339, 590, 696, 813, 852, 867, 941, 1007
BmrI	ACTGGG	1 cut(s)	280
BmsI	GCATC	2 cut(s)	448, 987
BmuI	ACTGGG	1 cut(s)	280
BpiI	GAAGAC	1 cut(s)	1004
BpmI	CTGGAG	1 cut(s)	717
BpuMI	CCSGG	3 cut(s)	27, 339, 590
BsaHI	GRCGYC	1 cut(s)	39
BsaI	GGTCTC	2 cut(s)	95, 390
BsaJI	CCNNGG	8 cut(s)	145, 434, 694, 730, 850, 851, 985, 1006
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 731, 755, 869, 977, 1046
Bse1I	ACTGG	2 cut(s)	286, 493
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	6 cut(s)	696, 813, 852, 867, 941, 1007
BseDI	CCNNGG	8 cut(s)	145, 434, 694, 730, 850, 851, 985, 1006
BseLI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 731, 755, 869, 977, 1046
BseMII	CTCAG	1 cut(s)	293
BseNI	ACTGG	2 cut(s)	286, 493
BseRI	GAGGAG	6 cut(s)	732, 735, 738, 822, 1011, 1014
BseSI	GKGCMC	2 cut(s)	694, 775
BseXI	GCAGC	2 cut(s)	521, 631
Bsh1236I	CGCG	3 cut(s)	75, 254, 256
Bsh1285I	CGRYCG	1 cut(s)	70
BshFI	GGCC	8 cut(s)	206, 251, 263, 337, 712, 849, 856, 1005
BshNI	GGYRCC	2 cut(s)	38, 689
BsiEI	CGRYCG	1 cut(s)	70
BsiHKAI	GWGCWC	2 cut(s)	775, 799
BsiHKCI	CYCGRG	2 cut(s)	98, 729
BsiSI	CCGG	4 cut(s)	27, 338, 410, 589
BslFI	GGGAC	1 cut(s)	274
BslI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 731, 755, 869, 977, 1046
BsmAI	GTCTC	6 cut(s)	49, 95, 310, 365, 390, 641
BsmBI	CGTCTC	2 cut(s)	49, 641
BsmFI	GGGAC	1 cut(s)	274
BsnI	GGCC	8 cut(s)	206, 251, 263, 337, 712, 849, 856, 1005
Bso31I	GGTCTC	2 cut(s)	95, 390
BsoBI	CYCGRG	2 cut(s)	98, 729
Bsp1286I	GDGCHC	4 cut(s)	694, 775, 799, 877
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	3 cut(s)	109, 121, 592
BspACI	CCGC	5 cut(s)	48, 70, 73, 247, 252
BspANI	GGCC	8 cut(s)	206, 251, 263, 337, 712, 849, 856, 1005
BspCNI	CTCAG	1 cut(s)	292
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	3 cut(s)	75, 254, 256
BspLI	GGNNCC	8 cut(s)	40, 470, 543, 594, 691, 765, 817, 876
BspMI	ACCTGC	1 cut(s)	889
BspPI	GGATC	3 cut(s)	116, 587, 600
BspQI	GCTCTTC	1 cut(s)	804
BspT107I	GGYRCC	2 cut(s)	38, 689
BspTNI	GGTCTC	2 cut(s)	95, 390
BsrI	ACTGG	2 cut(s)	286, 493
BssECI	CCNNGG	8 cut(s)	145, 434, 694, 730, 850, 851, 985, 1006
BssMI	GATC	3 cut(s)	109, 121, 592
BssNI	GRCGYC	1 cut(s)	39
BssT1I	CCWWGG	2 cut(s)	434, 985
Bst2UI	CCWGG	6 cut(s)	696, 813, 852, 867, 941, 1007
Bst4CI	ACNGT	1 cut(s)	322
Bst6I	CTCTTC	4 cut(s)	393, 398, 804, 1032
BstACI	GRCGYC	1 cut(s)	39
BstC8I	GCNNGC	2 cut(s)	77, 249
BstDEI	CTNAG	1 cut(s)	279
BstENI	CCTNNNNNAGG	1 cut(s)	753
BstFNI	CGCG	3 cut(s)	75, 254, 256
BstH2I	RGCGCY	2 cut(s)	42, 226
BstHHI	GCGC	5 cut(s)	41, 138, 225, 256, 300
BstKTI	GATC	3 cut(s)	112, 124, 595
BstMAI	GTCTC	6 cut(s)	49, 95, 310, 365, 390, 641
BstMBI	GATC	3 cut(s)	109, 121, 592
BstMCI	CGRYCG	1 cut(s)	70
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 248, 253, 260, 881
BstNI	CCWGG	6 cut(s)	696, 813, 852, 867, 941, 1007
BstSCI	CCNGG	9 cut(s)	25, 337, 588, 694, 811, 850, 865, 939, 1005
BstSFI	CTRYAG	1 cut(s)	343
BstSLI	GKGCMC	2 cut(s)	694, 775
BstUI	CGCG	3 cut(s)	75, 254, 256
BstV1I	GCAGC	2 cut(s)	521, 631
BstV2I	GAAGAC	1 cut(s)	1004
BstX2I	RGATCY	2 cut(s)	121, 592
BstYI	RGATCY	2 cut(s)	121, 592
BsuI	GTATCC	2 cut(s)	417, 947
BsuRI	GGCC	8 cut(s)	206, 251, 263, 337, 712, 849, 856, 1005
BtsIMutI	CAGTG	1 cut(s)	327
BveI	ACCTGC	1 cut(s)	889
Cac8I	GCNNGC	2 cut(s)	77, 249
CfoI	GCGC	5 cut(s)	41, 138, 225, 256, 300
Cfr13I	GGNCC	8 cut(s)	4, 205, 249, 469, 734, 848, 854, 1003
Csp6I	GTAC	1 cut(s)	549
CviAII	CATG	2 cut(s)	133, 1045
CviQI	GTAC	1 cut(s)	549
DdeI	CTNAG	1 cut(s)	279
DinI	GGCGCC	1 cut(s)	40
DpnI	GATC	3 cut(s)	111, 123, 594
DpnII	GATC	3 cut(s)	109, 121, 592
Eam1104I	CTCTTC	4 cut(s)	393, 398, 804, 1032
EarI	CTCTTC	4 cut(s)	393, 398, 804, 1032
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	797
Eco130I	CCWWGG	2 cut(s)	434, 985
Eco147I	AGGCCT	1 cut(s)	712
Eco24I	GRGCYC	2 cut(s)	799, 877
Eco31I	GGTCTC	2 cut(s)	95, 390
Eco47I	GGWCC	3 cut(s)	4, 469, 734
Eco53kI	GAGCTC	1 cut(s)	797
Eco88I	CYCGRG	2 cut(s)	98, 729
EcoICRI	GAGCTC	1 cut(s)	797
EcoNI	CCTNNNNNAGG	1 cut(s)	753
EcoRII	CCWGG	6 cut(s)	694, 811, 850, 865, 939, 1005
EcoT14I	CCWWGG	2 cut(s)	434, 985
EcoT38I	GRGCYC	2 cut(s)	799, 877
EgeI	GGCGCC	1 cut(s)	40
EheI	GGCGCC	1 cut(s)	40
ErhI	CCWWGG	2 cut(s)	434, 985
Esp3I	CGTCTC	2 cut(s)	49, 641
FaeI	CATG	2 cut(s)	136, 1048
FaqI	GGGAC	1 cut(s)	274
FatI	CATG	2 cut(s)	132, 1044
FauI	CCCGC	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	949
Fnu4HI	GCNGC	4 cut(s)	73, 252, 510, 620
FriOI	GRGCYC	2 cut(s)	799, 877
Fsp4HI	GCNGC	4 cut(s)	73, 252, 510, 620
FspBI	CTAG	4 cut(s)	546, 768, 792, 1041
FspI	TGCGCA	1 cut(s)	137
GlaI	GCGC	5 cut(s)	40, 137, 224, 255, 299
GluI	GCNGC	4 cut(s)	73, 252, 510, 620
GsuI	CTGGAG	1 cut(s)	717
HaeII	RGCGCY	2 cut(s)	42, 226
HaeIII	GGCC	8 cut(s)	206, 251, 263, 337, 712, 849, 856, 1005
HapII	CCGG	4 cut(s)	27, 338, 410, 589
HhaI	GCGC	5 cut(s)	41, 138, 225, 256, 300
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	2 cut(s)	136, 1048
Hin6I	GCGC	5 cut(s)	39, 136, 223, 254, 298
HinP1I	GCGC	5 cut(s)	39, 136, 223, 254, 298
HinfI	GANTC	3 cut(s)	81, 568, 599
HpaII	CCGG	4 cut(s)	27, 338, 410, 589
HphI	GGTGA	2 cut(s)	134, 931
Hpy166II	GTNNAC	5 cut(s)	164, 612, 737, 773, 950
Hpy188I	TCNGA	3 cut(s)	86, 149, 573
Hpy188III	TCNNGA	4 cut(s)	100, 397, 410, 596
Hpy8I	GTNNAC	5 cut(s)	164, 612, 737, 773, 950
Hpy99I	CGWCG	1 cut(s)	90
HpyAV	CCTTC	1 cut(s)	714
HpyCH4III	ACNGT	1 cut(s)	322
HpyCH4IV	ACGT	1 cut(s)	614
HpyCH4V	TGCA	6 cut(s)	181, 428, 509, 619, 773, 1000
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 248, 253, 260, 881
HpyF3I	CTNAG	1 cut(s)	279
HpySE526I	ACGT	1 cut(s)	614
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	2 cut(s)	136, 1048
HspAI	GCGC	5 cut(s)	39, 136, 223, 254, 298
KasI	GGCGCC	1 cut(s)	38
Kpn2I	TCCGGA	1 cut(s)	409
Kzo9I	GATC	3 cut(s)	109, 121, 592
LguI	GCTCTTC	1 cut(s)	804
LmnI	GCTCC	2 cut(s)	763, 880
Lsp1109I	GCAGC	2 cut(s)	521, 631
LweI	GCATC	2 cut(s)	448, 987
MaeI	CTAG	4 cut(s)	546, 768, 792, 1041
MaeII	ACGT	1 cut(s)	614
MaeIII	GTNAC	2 cut(s)	194, 349
MalI	GATC	3 cut(s)	111, 123, 594
MboI	GATC	3 cut(s)	109, 121, 592
MboII	GAAGA	8 cut(s)	380, 385, 431, 491, 571, 791, 1004, 1019
MflI	RGATCY	2 cut(s)	121, 592
MhlI	GDGCHC	4 cut(s)	694, 775, 799, 877
MluCI	AATT	2 cut(s)	327, 922
Mly113I	GGCGCC	1 cut(s)	39
MlyI	GAGTC	3 cut(s)	75, 562, 593
MmeI	TCCRAC	3 cut(s)	109, 496, 827
MroI	TCCGGA	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	578
MseI	TTAA	3 cut(s)	537, 636, 1054
MslI	CAYNNNNRTG	2 cut(s)	186, 917
MspI	CCGG	4 cut(s)	27, 338, 410, 589
MspR9I	CCNGG	9 cut(s)	27, 339, 590, 696, 813, 852, 867, 941, 1007
MvaI	CCWGG	6 cut(s)	696, 813, 852, 867, 941, 1007
MvnI	CGCG	3 cut(s)	75, 254, 256
MwoI	GCNNNNNNNGC	5 cut(s)	47, 248, 253, 260, 881
NarI	GGCGCC	1 cut(s)	39
NciI	CCSGG	3 cut(s)	27, 339, 590
NdeII	GATC	3 cut(s)	109, 121, 592
NlaIII	CATG	2 cut(s)	136, 1048
NlaIV	GGNNCC	8 cut(s)	40, 470, 543, 594, 691, 765, 817, 876
NsbI	TGCGCA	1 cut(s)	137
OliI	CACNNNNGTG	1 cut(s)	917
PaeR7I	CTCGAG	1 cut(s)	98
PaqCI	CACCTGC	1 cut(s)	889
PasI	CCCWGGG	1 cut(s)	851
PceI	AGGCCT	1 cut(s)	712
PciSI	GCTCTTC	1 cut(s)	804
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 72
PdmI	GAANNNNTTC	1 cut(s)	578
PkrI	GCNGC	4 cut(s)	74, 253, 511, 621
PleI	GAGTC	3 cut(s)	75, 562, 593
PluTI	GGCGCC	1 cut(s)	42
PpsI	GAGTC	3 cut(s)	75, 562, 593
Psp124BI	GAGCTC	1 cut(s)	799
Psp6I	CCWGG	6 cut(s)	694, 811, 850, 865, 939, 1005
PspGI	CCWGG	6 cut(s)	694, 811, 850, 865, 939, 1005
PspN4I	GGNNCC	8 cut(s)	40, 470, 543, 594, 691, 765, 817, 876
PspPI	GGNCC	8 cut(s)	4, 205, 249, 469, 734, 848, 854, 1003
PsuI	RGATCY	2 cut(s)	121, 592
RsaI	GTAC	1 cut(s)	550
RsaNI	GTAC	1 cut(s)	549
RseI	CAYNNNNRTG	2 cut(s)	186, 917
SacI	GAGCTC	1 cut(s)	799
SapI	GCTCTTC	1 cut(s)	804
SaqAI	TTAA	3 cut(s)	537, 636, 1054
SatI	GCNGC	4 cut(s)	73, 252, 510, 620
Sau3AI	GATC	3 cut(s)	109, 121, 592
Sau96I	GGNCC	8 cut(s)	4, 205, 249, 469, 734, 848, 854, 1003
SchI	GAGTC	3 cut(s)	75, 562, 593
ScrFI	CCNGG	9 cut(s)	27, 339, 590, 696, 813, 852, 867, 941, 1007
SduI	GDGCHC	4 cut(s)	694, 775, 799, 877
SfaNI	GCATC	2 cut(s)	448, 987
SfcI	CTRYAG	1 cut(s)	343
SfoI	GGCGCC	1 cut(s)	40
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	3 cut(s)	4, 469, 734
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	2 cut(s)	186, 917
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	2 cut(s)	327, 922
SseBI	AGGCCT	1 cut(s)	712
SsiI	CCGC	5 cut(s)	48, 70, 73, 247, 252
SspDI	GGCGCC	1 cut(s)	38
SspMI	CTAG	4 cut(s)	546, 768, 792, 1041
SstI	GAGCTC	1 cut(s)	799
StuI	AGGCCT	1 cut(s)	712
StyD4I	CCNGG	9 cut(s)	25, 337, 588, 694, 811, 850, 865, 939, 1005
StyI	CCWWGG	2 cut(s)	434, 985
TaaI	ACNGT	1 cut(s)	322
TaiI	ACGT	1 cut(s)	617
TaqI	TCGA	3 cut(s)	66, 99, 566
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	2 cut(s)	327, 922
TatI	WGTACW	1 cut(s)	548
TauI	GCSGC	2 cut(s)	75, 254
Tru1I	TTAA	3 cut(s)	537, 636, 1054
Tru9I	TTAA	3 cut(s)	537, 636, 1054
TscAI	CASTG	1 cut(s)	327
TseI	GCWGC	2 cut(s)	509, 619
TspDTI	ATGAA	1 cut(s)	121
TspRI	CASTG	1 cut(s)	327
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	3 cut(s)	4, 469, 734
XagI	CCTNNNNNAGG	1 cut(s)	753
XapI	RAATTY	1 cut(s)	922
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	1 cut(s)	949
XmnI	GAANNNNTTC	1 cut(s)	578
XspI	CTAG	4 cut(s)	546, 768, 792, 1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.