Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003932

Physical Location & Seq

Genomic Coordinates Reverse (-)

8830275 .. 8831795

Gene Structure 1521 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG118500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGGACCGAGAGTGGGGTTCAAAGCCCGGAGGTGGAGGCGCCGCCTCCGCCCAAAACGAAGCCATCGACCGCCGCGAGCGACTCCAACGACTTGCCCTCGAGACCATTGATCTCGCCAAAGATCCATACTTCATGCGCAATCACCTCGGAAGCTATGAGTGTAAACTTTGCTTGACCTTGCACAACAATGAGGGTAACTACTTGGCCCATACACAGGGAAAGCGCCACCAGACCTATCTCGCCAAGCGGGCCGCGCGTGAGGCCAAGGATATTCCTGCTCAGCCCCAGCCCCACAAGCGCAAAGTCTCCGTTCGCAAAACAGTGAAAATTGGTAGGCCGGGCTATAGAGTAACAAAGCAGTTTGATGGAGAGACAAAGCAAAGGTCCCTTCTCTTCCAGATTGAGTATCCGGAAATAGAAGATAATGCAAAGCCAAGGCATCGTTTTATGTCATCTTATGAGCAGAGGGTCCAACCCTATGAGAAAAGATACCAGTATCTTCTGTTTGCAGCCGAACCATACGAGATAATTGCTTTTAAGGTTCCTAGTACAGAGATTGACAAATCGACTCCAAAGTTCTTCTCACATTGGGATCCAGACTCCAAAATGTTCACGTTGCAGCTATATTTCAAAGTTAAGCCACCAGAGACGAACAAACCTCAACCTCCCCCAAATGCCAATGGCACAGATGCTCCTGGAGTTCCTTCAAGGCCTCTACCCCCACCACCCCGAGGTCCACCTCCTCCTCCTCCACAAGGAATGGAGCCTAGTGCACCTATGGGAAACCCTCCTAGAGCTCCACCAACTATTCCTGGTTCCTTACTGCCACCTCCTCCTATGGTAAATGGCCCTGGGCCTATGCCTCCTGGTGGGGCTCCACCTGCCCCACCTCCACCTCCTGTCAACAATAACACAATGGTTCCATCTTACACTTACCAGCTCCTCCTGCAGAGTCAGTTGCCACGGTATACATACCTCCTCCTCCAGGAATTAAAGTCATCATTGATAAAGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010720 GO:0010975 GO:0010976 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022008 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030532 GO:0031344 GO:0031346 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046483 GO:0048518 GO:0048522 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051960 GO:0051962 GO:0060284 GO:0065003 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120035 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3A2 zf-met

Protein Analysis

338

Amino Acids

37.93

Weight (kDa)

9.66

Isoelectric Point (pI)

59.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	52 - 76	1.1e-06	Zinc-finger of C2H2 type
SF3A2	PF16835	110 - 204	5e-37	Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32600
fragaria_vesca	FvH4_6g16880 FvH4_6g16880 FvH4_6g16880 FvH4_6g16880
malus_domestica	MD04G1088800.v1.1 MD12G1106500.v1.1
prunus_persica	Prupe.4G071900_v2.0.a1 Prupe.7G125300_v2.0.a1 Prupe.7G125300_v2.0.a1
pyrus_communis	pycom04g08310 pycom12g10700
rosa_chinensis	RchiOBHm_Chr3g0470901 RchiOBHm_Chr7g0191101
rosa_laevigata	RLG00000024235 RLG00000025908
rosa_multiflora	Rmu_co8030388.1_g000001 Rmu_sc0005903.1_g000001 Rmu_sc0010267.1_g000002 Rmu_sc0030335.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264030 Rroxscaffold_6G00410430 Rroxscaffold_6G00426670
rosa_rugosa	Rorug03G0113500 Rorug06G0508500
rosa_samantha	Rh1AG146000 Rh1DG152700 Rh3AG163300 Rh3BG188700 Rh3CG178700 Rh3DG187400 Rh7BG118500 Rh7CG121000
rosa_wichuraiana	Rw3G015380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	889
Acc16I	TGCGCA	1 cut(s)	137
Acc36I	ACCTGC	1 cut(s)	889
AccB1I	GGYRCC	1 cut(s)	38
AccI	GTMKAC	1 cut(s)	968
AccII	CGCG	3 cut(s)	75, 254, 256
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	6 cut(s)	42, 48, 70, 73, 247, 252
AclWI	GGATC	3 cut(s)	116, 587, 600
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	1 cut(s)	550
AfiI	CCNNNNNNNGG	7 cut(s)	13, 32, 214, 731, 755, 869, 985
AgsI	TTSAA	3 cut(s)	21, 631, 708
AjnI	CCWGG	5 cut(s)	694, 811, 850, 865, 984
AluBI	AGCT	4 cut(s)	153, 622, 797, 940
AluI	AGCT	4 cut(s)	153, 622, 797, 940
Alw21I	GWGCWC	2 cut(s)	775, 799
Alw26I	GTCTC	4 cut(s)	95, 310, 365, 641
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	3 cut(s)	116, 587, 600
Ama87I	CYCGRG	2 cut(s)	98, 729
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	7 cut(s)	204, 249, 261, 335, 710, 847, 854
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	2 cut(s)	509, 619
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
AspLEI	GCGC	5 cut(s)	41, 138, 225, 256, 300
AspS9I	GGNCC	8 cut(s)	4, 205, 249, 384, 469, 734, 848, 854
AsuC2I	CCSGG	2 cut(s)	27, 339
AsuHPI	GGTGA	1 cut(s)	134
AvaI	CYCGRG	2 cut(s)	98, 729
AvaII	GGWCC	4 cut(s)	4, 384, 469, 734
BaeGI	GKGCMC	1 cut(s)	775
BamHI	GGATCC	1 cut(s)	592
BanI	GGYRCC	1 cut(s)	38
BanII	GRGCYC	2 cut(s)	799, 877
Bbv12I	GWGCWC	2 cut(s)	775, 799
BbvI	GCAGC	2 cut(s)	521, 631
BccI	CCATC	3 cut(s)	71, 359, 931
BcgI	CGANNNNNNTGC	4 cut(s)	127, 161, 512, 546
BciT130I	CCWGG	5 cut(s)	696, 813, 852, 867, 986
BciVI	GTATCC	1 cut(s)	417
BcnI	CCSGG	2 cut(s)	27, 339
BcoDI	GTCTC	4 cut(s)	95, 310, 365, 641
BfaI	CTAG	3 cut(s)	546, 768, 792
BfmI	CTRYAG	2 cut(s)	343, 947
BfoI	RGCGCY	2 cut(s)	42, 226
BfuAI	ACCTGC	1 cut(s)	889
BfuI	GTATCC	1 cut(s)	417
BglI	GCCNNNNNGGC	1 cut(s)	248
BisI	GCNGC	5 cut(s)	42, 73, 252, 510, 620
BlpI	GCTNAGC	1 cut(s)	279
BlsI	GCNGC	5 cut(s)	43, 74, 253, 511, 621
Bme1390I	CCNGG	7 cut(s)	27, 339, 696, 813, 852, 867, 986
Bme18I	GGWCC	4 cut(s)	4, 384, 469, 734
BmeT110I	CYCGRG	2 cut(s)	98, 729
BmgT120I	GGNCC	8 cut(s)	4, 205, 249, 384, 469, 734, 848, 854
BmiI	GGNNCC	9 cut(s)	40, 386, 470, 543, 594, 765, 817, 876, 921
BmrFI	CCNGG	7 cut(s)	27, 339, 696, 813, 852, 867, 986
BmsI	GCATC	2 cut(s)	448, 679
BpmI	CTGGAG	2 cut(s)	717, 968
Bpu1102I	GCTNAGC	1 cut(s)	279
BpuMI	CCSGG	2 cut(s)	27, 339
BsaHI	GRCGYC	1 cut(s)	39
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	7 cut(s)	145, 264, 434, 730, 850, 851, 962
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	2 cut(s)	676, 706
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 32, 214, 731, 755, 869, 985
Bse1I	ACTGG	1 cut(s)	493
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	5 cut(s)	696, 813, 852, 867, 986
BseDI	CCNNGG	7 cut(s)	145, 264, 434, 730, 850, 851, 962
BseLI	CCNNNNNNNGG	7 cut(s)	13, 32, 214, 731, 755, 869, 985
BseMII	CTCAG	1 cut(s)	293
BseNI	ACTGG	1 cut(s)	493
BseRI	GAGGAG	7 cut(s)	732, 735, 738, 822, 932, 968, 971
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	2 cut(s)	521, 631
BseYI	CCCAGC	1 cut(s)	285
Bsh1236I	CGCG	3 cut(s)	75, 254, 256
Bsh1285I	CGRYCG	1 cut(s)	70
BshFI	GGCC	7 cut(s)	206, 251, 263, 337, 712, 849, 856
BshNI	GGYRCC	1 cut(s)	38
BsiEI	CGRYCG	1 cut(s)	70
BsiHKAI	GWGCWC	2 cut(s)	775, 799
BsiHKCI	CYCGRG	2 cut(s)	98, 729
BsiSI	CCGG	3 cut(s)	27, 338, 410
BslFI	GGGAC	1 cut(s)	370
BslI	CCNNNNNNNGG	7 cut(s)	13, 32, 214, 731, 755, 869, 985
BsmAI	GTCTC	4 cut(s)	95, 310, 365, 641
BsmBI	CGTCTC	1 cut(s)	641
BsmFI	GGGAC	1 cut(s)	370
BsnI	GGCC	7 cut(s)	206, 251, 263, 337, 712, 849, 856
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	2 cut(s)	98, 729
Bsp1286I	GDGCHC	3 cut(s)	775, 799, 877
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	3 cut(s)	109, 121, 592
Bsp1720I	GCTNAGC	1 cut(s)	279
BspACI	CCGC	6 cut(s)	42, 48, 70, 73, 247, 252
BspANI	GGCC	7 cut(s)	206, 251, 263, 337, 712, 849, 856
BspCNI	CTCAG	1 cut(s)	292
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	3 cut(s)	75, 254, 256
BspHI	TCATGA	1 cut(s)	1013
BspLI	GGNNCC	9 cut(s)	40, 386, 470, 543, 594, 765, 817, 876, 921
BspMAI	CTGCAG	1 cut(s)	951
BspMI	ACCTGC	1 cut(s)	889
BspPI	GGATC	3 cut(s)	116, 587, 600
BspT107I	GGYRCC	1 cut(s)	38
BspTNI	GGTCTC	1 cut(s)	95
BsrI	ACTGG	1 cut(s)	493
BssECI	CCNNGG	7 cut(s)	145, 264, 434, 730, 850, 851, 962
BssMI	GATC	3 cut(s)	109, 121, 592
BssNAI	GTATAC	1 cut(s)	969
BssNI	GRCGYC	1 cut(s)	39
BssT1I	CCWWGG	2 cut(s)	264, 434
Bst1107I	GTATAC	1 cut(s)	969
Bst2UI	CCWGG	5 cut(s)	696, 813, 852, 867, 986
Bst4CI	ACNGT	2 cut(s)	322, 966
Bst6I	CTCTTC	1 cut(s)	398
BstACI	GRCGYC	1 cut(s)	39
BstC8I	GCNNGC	2 cut(s)	77, 249
BstDEI	CTNAG	1 cut(s)	279
BstDSI	CCRYGG	1 cut(s)	962
BstENI	CCTNNNNNAGG	2 cut(s)	753, 983
BstFNI	CGCG	3 cut(s)	75, 254, 256
BstH2I	RGCGCY	2 cut(s)	42, 226
BstHHI	GCGC	5 cut(s)	41, 138, 225, 256, 300
BstKTI	GATC	3 cut(s)	112, 124, 595
BstMAI	GTCTC	4 cut(s)	95, 310, 365, 641
BstMBI	GATC	3 cut(s)	109, 121, 592
BstMCI	CGRYCG	1 cut(s)	70
BstMWI	GCNNNNNNNGC	7 cut(s)	47, 248, 253, 260, 295, 881, 946
BstNI	CCWGG	5 cut(s)	696, 813, 852, 867, 986
BstSCI	CCNGG	7 cut(s)	25, 337, 694, 811, 850, 865, 984
BstSFI	CTRYAG	2 cut(s)	343, 947
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	3 cut(s)	75, 254, 256
BstV1I	GCAGC	2 cut(s)	521, 631
BstX2I	RGATCY	2 cut(s)	121, 592
BstYI	RGATCY	2 cut(s)	121, 592
BstZ17I	GTATAC	1 cut(s)	969
BsuI	GTATCC	1 cut(s)	417
BsuRI	GGCC	7 cut(s)	206, 251, 263, 337, 712, 849, 856
BtgI	CCRYGG	1 cut(s)	962
BtsIMutI	CAGTG	1 cut(s)	327
BveI	ACCTGC	1 cut(s)	889
Cac8I	GCNNGC	2 cut(s)	77, 249
CciI	TCATGA	1 cut(s)	1013
CfoI	GCGC	5 cut(s)	41, 138, 225, 256, 300
Cfr13I	GGNCC	8 cut(s)	4, 205, 249, 384, 469, 734, 848, 854
Csp6I	GTAC	1 cut(s)	549
CviAII	CATG	2 cut(s)	133, 1014
CviQI	GTAC	1 cut(s)	549
DdeI	CTNAG	1 cut(s)	279
DinI	GGCGCC	1 cut(s)	40
DpnI	GATC	3 cut(s)	111, 123, 594
DpnII	GATC	3 cut(s)	109, 121, 592
Eam1104I	CTCTTC	1 cut(s)	398
EarI	CTCTTC	1 cut(s)	398
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	797
Eco130I	CCWWGG	2 cut(s)	264, 434
Eco147I	AGGCCT	1 cut(s)	712
Eco24I	GRGCYC	2 cut(s)	799, 877
Eco31I	GGTCTC	1 cut(s)	95
Eco47I	GGWCC	4 cut(s)	4, 384, 469, 734
Eco53kI	GAGCTC	1 cut(s)	797
Eco88I	CYCGRG	2 cut(s)	98, 729
EcoICRI	GAGCTC	1 cut(s)	797
EcoNI	CCTNNNNNAGG	2 cut(s)	753, 983
EcoO109I	RGGNCCY	1 cut(s)	384
EcoRII	CCWGG	5 cut(s)	694, 811, 850, 865, 984
EcoT14I	CCWWGG	2 cut(s)	264, 434
EcoT38I	GRGCYC	2 cut(s)	799, 877
EgeI	GGCGCC	1 cut(s)	40
EheI	GGCGCC	1 cut(s)	40
ErhI	CCWWGG	2 cut(s)	264, 434
Esp3I	CGTCTC	1 cut(s)	641
FaeI	CATG	2 cut(s)	136, 1017
FaqI	GGGAC	1 cut(s)	370
FatI	CATG	2 cut(s)	132, 1013
FauI	CCCGC	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	968
Fnu4HI	GCNGC	5 cut(s)	42, 73, 252, 510, 620
FriOI	GRGCYC	2 cut(s)	799, 877
Fsp4HI	GCNGC	5 cut(s)	42, 73, 252, 510, 620
FspBI	CTAG	3 cut(s)	546, 768, 792
FspI	TGCGCA	1 cut(s)	137
GlaI	GCGC	5 cut(s)	40, 137, 224, 255, 299
GluI	GCNGC	5 cut(s)	42, 73, 252, 510, 620
GsaI	CCCAGC	1 cut(s)	289
GsuI	CTGGAG	2 cut(s)	717, 968
HaeII	RGCGCY	2 cut(s)	42, 226
HaeIII	GGCC	7 cut(s)	206, 251, 263, 337, 712, 849, 856
HapII	CCGG	3 cut(s)	27, 338, 410
HhaI	GCGC	5 cut(s)	41, 138, 225, 256, 300
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	2 cut(s)	136, 1017
Hin6I	GCGC	5 cut(s)	39, 136, 223, 254, 298
HinP1I	GCGC	5 cut(s)	39, 136, 223, 254, 298
HincII	GTYRAC	1 cut(s)	904
HindII	GTYRAC	1 cut(s)	904
HinfI	GANTC	4 cut(s)	81, 568, 599, 952
HpaII	CCGG	3 cut(s)	27, 338, 410
HphI	GGTGA	1 cut(s)	134
Hpy166II	GTNNAC	6 cut(s)	164, 612, 737, 773, 904, 969
Hpy188I	TCNGA	1 cut(s)	149
Hpy188III	TCNNGA	5 cut(s)	100, 397, 410, 596, 1014
Hpy8I	GTNNAC	6 cut(s)	164, 612, 737, 773, 904, 969
HpyAV	CCTTC	2 cut(s)	398, 714
HpyCH4III	ACNGT	2 cut(s)	322, 966
HpyCH4IV	ACGT	1 cut(s)	614
HpyCH4V	TGCA	6 cut(s)	181, 428, 509, 619, 773, 949
HpyF10VI	GCNNNNNNNGC	7 cut(s)	47, 248, 253, 260, 295, 881, 946
HpyF3I	CTNAG	1 cut(s)	279
HpySE526I	ACGT	1 cut(s)	614
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	2 cut(s)	136, 1017
HspAI	GCGC	5 cut(s)	39, 136, 223, 254, 298
KasI	GGCGCC	1 cut(s)	38
Kpn2I	TCCGGA	1 cut(s)	409
Kzo9I	GATC	3 cut(s)	109, 121, 592
LmnI	GCTCC	5 cut(s)	697, 763, 802, 880, 945
Lsp1109I	GCAGC	2 cut(s)	521, 631
LweI	GCATC	2 cut(s)	448, 679
MaeI	CTAG	3 cut(s)	546, 768, 792
MaeII	ACGT	1 cut(s)	614
MaeIII	GTNAC	2 cut(s)	194, 349
MalI	GATC	3 cut(s)	111, 123, 594
MboI	GATC	3 cut(s)	109, 121, 592
MboII	GAAGA	4 cut(s)	385, 431, 491, 571
MflI	RGATCY	2 cut(s)	121, 592
MhlI	GDGCHC	3 cut(s)	775, 799, 877
MluCI	AATT	3 cut(s)	327, 528, 989
Mly113I	GGCGCC	1 cut(s)	39
MlyI	GAGTC	4 cut(s)	75, 562, 593, 961
MmeI	TCCRAC	2 cut(s)	109, 496
MroI	TCCGGA	1 cut(s)	409
MseI	TTAA	3 cut(s)	537, 636, 992
MslI	CAYNNNNRTG	1 cut(s)	186
MspI	CCGG	3 cut(s)	27, 338, 410
MspR9I	CCNGG	7 cut(s)	27, 339, 696, 813, 852, 867, 986
MvaI	CCWGG	5 cut(s)	696, 813, 852, 867, 986
MvnI	CGCG	3 cut(s)	75, 254, 256
MwoI	GCNNNNNNNGC	7 cut(s)	47, 248, 253, 260, 295, 881, 946
NarI	GGCGCC	1 cut(s)	39
NciI	CCSGG	2 cut(s)	27, 339
NdeII	GATC	3 cut(s)	109, 121, 592
NlaIII	CATG	2 cut(s)	136, 1017
NlaIV	GGNNCC	9 cut(s)	40, 386, 470, 543, 594, 765, 817, 876, 921
NsbI	TGCGCA	1 cut(s)	137
PaeR7I	CTCGAG	1 cut(s)	98
PagI	TCATGA	1 cut(s)	1013
PaqCI	CACCTGC	1 cut(s)	889
PasI	CCCWGGG	1 cut(s)	851
PceI	AGGCCT	1 cut(s)	712
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 72
PfoI	TCCNGGA	2 cut(s)	694, 984
PkrI	GCNGC	5 cut(s)	43, 74, 253, 511, 621
PleI	GAGTC	4 cut(s)	75, 562, 593, 960
PluTI	GGCGCC	1 cut(s)	42
PpsI	GAGTC	4 cut(s)	75, 562, 593, 960
PpuMI	RGGWCCY	1 cut(s)	384
Psp124BI	GAGCTC	1 cut(s)	799
Psp5II	RGGWCCY	1 cut(s)	384
Psp6I	CCWGG	5 cut(s)	694, 811, 850, 865, 984
PspFI	CCCAGC	1 cut(s)	285
PspGI	CCWGG	5 cut(s)	694, 811, 850, 865, 984
PspN4I	GGNNCC	9 cut(s)	40, 386, 470, 543, 594, 765, 817, 876, 921
PspPI	GGNCC	8 cut(s)	4, 205, 249, 384, 469, 734, 848, 854
PspPPI	RGGWCCY	1 cut(s)	384
PstI	CTGCAG	1 cut(s)	951
PsuI	RGATCY	2 cut(s)	121, 592
RsaI	GTAC	1 cut(s)	550
RsaNI	GTAC	1 cut(s)	549
RseI	CAYNNNNRTG	1 cut(s)	186
SacI	GAGCTC	1 cut(s)	799
SaqAI	TTAA	3 cut(s)	537, 636, 992
SatI	GCNGC	5 cut(s)	42, 73, 252, 510, 620
Sau3AI	GATC	3 cut(s)	109, 121, 592
Sau96I	GGNCC	8 cut(s)	4, 205, 249, 384, 469, 734, 848, 854
SchI	GAGTC	4 cut(s)	75, 562, 593, 961
ScrFI	CCNGG	7 cut(s)	27, 339, 696, 813, 852, 867, 986
SduI	GDGCHC	3 cut(s)	775, 799, 877
SfaNI	GCATC	2 cut(s)	448, 679
SfcI	CTRYAG	2 cut(s)	343, 947
SfoI	GGCGCC	1 cut(s)	40
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	4 cut(s)	4, 384, 469, 734
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	1 cut(s)	186
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	3 cut(s)	327, 528, 989
SseBI	AGGCCT	1 cut(s)	712
SsiI	CCGC	6 cut(s)	42, 48, 70, 73, 247, 252
SspDI	GGCGCC	1 cut(s)	38
SspMI	CTAG	3 cut(s)	546, 768, 792
SstI	GAGCTC	1 cut(s)	799
StuI	AGGCCT	1 cut(s)	712
StyD4I	CCNGG	7 cut(s)	25, 337, 694, 811, 850, 865, 984
StyI	CCWWGG	2 cut(s)	264, 434
TaaI	ACNGT	2 cut(s)	322, 966
TaiI	ACGT	1 cut(s)	617
TaqI	TCGA	3 cut(s)	66, 99, 566
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	3 cut(s)	327, 528, 989
TatI	WGTACW	1 cut(s)	548
TauI	GCSGC	3 cut(s)	44, 75, 254
Tru1I	TTAA	3 cut(s)	537, 636, 992
Tru9I	TTAA	3 cut(s)	537, 636, 992
TscAI	CASTG	1 cut(s)	327
TseI	GCWGC	2 cut(s)	509, 619
TspDTI	ATGAA	1 cut(s)	121
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	1 cut(s)	327
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	4 cut(s)	4, 384, 469, 734
XagI	CCTNNNNNAGG	2 cut(s)	753, 983
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	1 cut(s)	968
XspI	CTAG	3 cut(s)	546, 768, 792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.