Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003932

Physical Location & Seq

Genomic Coordinates Reverse (-)

32864952 .. 32867238

Gene Structure 2287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00410430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGACCGAGAGTGGGGCTCCAAGCCCGGCAGCGGCGGCGCCGCCTCCGCCCAGAACGAAGCCATCGACCGCCGCGAGCGACTCCGACGACTCGCCCTCGAGACCATCGATCTCGCCAAAGATCCCTACTTCATGCGCAACCACCTCGGAAGCTATGAGTGTAAACTTTGCTTGACCTTGCACAACAATGAGGGTAACTACTTGGCCCATACACAGGGAAAGCGCCACCAGACCAATCTCGCCAAGCGGGCGGCGCTGAAAATTGGTAGGCCGGGGTATAGAGTAACGAAGCAGTTTGATGGGGAGACAAAGCAGAGGTCTCTTCTCTTCCAGATTGAGTATCCTGAGATAGAAGATAATGCAAAGCCAAGGCATCGTTTTATGTCGTCTTATGAGCAGAGGGTCCAACCCTTCGAGAAAAGATACCAGTATCTTCTGTTTGCAGCTGAACCATACGAGATAATTGCTTTTAAGGTTCCAAGTACAGAGATTGACAAATCAACTCCGAAGTTCTTTTCACATTGGGATCCAGACTCTAAAATGTTCACGTTGCAGCTATATTTCAAAGTTAAGCCACCAGAGACGAACAAACCTCAACCTCCCCCAACAGCCAATGGCACAGGTGCTCCTGGAGTTCCTTCAAGGCCTCTACCCCCACCACCCCAAGGTCCACCTCCTCCTCCTCCACAAGGAATGGCGCCTGGTGCGCCTATGGGAAACCCTCCTAGAGCTCCACCACCTATTCCTGGATCCTTACTGCCACCTCCTCCTATGGTAAATGGCCCTAGGCCTATGCCTCCTGGTGGGGCTCCACCTGCCCCACCTCCACCTCCTGTCGGTAATAACACAATGGTGAATTTCACTCCTGGTACCCAGATGGGTAGACCACCGACTATGCCACCTCCACCCCAAGGCTTCCAAGGACAACAGATGCAGGGCCAGGGTCTTCGGCCTCCTCCTCCACCTCCTAGCATGGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010720 GO:0010975 GO:0010976 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022008 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030532 GO:0031344 GO:0031346 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046483 GO:0048518 GO:0048522 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051960 GO:0051962 GO:0060284 GO:0065003 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120035 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3A2 zf-met

Protein Analysis

326

Amino Acids

35.87

Weight (kDa)

9.78

Isoelectric Point (pI)

62.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	52 - 76	1.1e-06	Zinc-finger of C2H2 type
SF3A2	PF16835	88 - 182	8e-37	Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32600
fragaria_vesca	FvH4_6g16880 FvH4_6g16880 FvH4_6g16880 FvH4_6g16880
malus_domestica	MD04G1088800.v1.1 MD12G1106500.v1.1
prunus_persica	Prupe.4G071900_v2.0.a1 Prupe.7G125300_v2.0.a1 Prupe.7G125300_v2.0.a1
pyrus_communis	pycom04g08310 pycom12g10700
rosa_chinensis	RchiOBHm_Chr3g0470901 RchiOBHm_Chr7g0191101
rosa_laevigata	RLG00000024235 RLG00000025908
rosa_multiflora	Rmu_co8030388.1_g000001 Rmu_sc0005903.1_g000001 Rmu_sc0010267.1_g000002 Rmu_sc0030335.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264030 Rroxscaffold_6G00410430 Rroxscaffold_6G00426670
rosa_rugosa	Rorug03G0113500 Rorug06G0508500
rosa_samantha	Rh1AG146000 Rh1DG152700 Rh3AG163300 Rh3BG188700 Rh3CG178700 Rh3DG187400 Rh7BG118500 Rh7CG121000
rosa_wichuraiana	Rw3G015380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	823
Acc16I	TGCGCA	1 cut(s)	137
Acc36I	ACCTGC	1 cut(s)	823
Acc65I	GGTACC	1 cut(s)	869
AccB1I	GGYRCC	3 cut(s)	38, 697, 869
AccI	GTMKAC	1 cut(s)	883
AccII	CGCG	1 cut(s)	75
AciI	CCGC	8 cut(s)	33, 36, 42, 48, 70, 73, 247, 251
AclWI	GGATC	5 cut(s)	116, 521, 534, 744, 757
AcsI	RAATTY	1 cut(s)	856
AcyI	GRCGYC	2 cut(s)	39, 698
AfaI	GTAC	2 cut(s)	484, 871
AgsI	TTSAA	2 cut(s)	565, 642
AjnI	CCWGG	6 cut(s)	628, 700, 745, 799, 865, 939
AleI	CACNNNNGTG	1 cut(s)	851
AluBI	AGCT	4 cut(s)	153, 446, 556, 731
AluI	AGCT	4 cut(s)	153, 446, 556, 731
Alw21I	GWGCWC	2 cut(s)	628, 733
Alw26I	GTCTC	4 cut(s)	95, 299, 324, 575
AlwI	GGATC	5 cut(s)	116, 521, 534, 744, 757
Ama87I	CYCGRG	1 cut(s)	98
AoxI	GGCC	7 cut(s)	204, 269, 644, 781, 788, 937, 950
ApeKI	GCWGC	3 cut(s)	30, 443, 553
ApoI	RAATTY	1 cut(s)	856
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
Asp718I	GGTACC	1 cut(s)	869
AspA2I	CCTAGG	1 cut(s)	785
AspLEI	GCGC	6 cut(s)	41, 138, 225, 256, 700, 709
AspS9I	GGNCC	6 cut(s)	4, 205, 403, 668, 782, 937
AsuC2I	CCSGG	2 cut(s)	27, 273
AsuHPI	GGTGA	1 cut(s)	865
AvaI	CYCGRG	1 cut(s)	98
AvaII	GGWCC	3 cut(s)	4, 403, 668
AvrII	CCTAGG	1 cut(s)	785
BamHI	GGATCC	2 cut(s)	526, 749
BanI	GGYRCC	3 cut(s)	38, 697, 869
BanII	GRGCYC	3 cut(s)	20, 733, 811
BbsI	GAAGAC	1 cut(s)	938
Bbv12I	GWGCWC	2 cut(s)	628, 733
BbvI	GCAGC	3 cut(s)	42, 455, 565
BccI	CCATC	4 cut(s)	71, 113, 293, 871
BcgI	CGANNNNNNTGC	4 cut(s)	127, 161, 446, 480
BciT130I	CCWGG	6 cut(s)	630, 702, 747, 801, 867, 941
BciVI	GTATCC	1 cut(s)	351
BcnI	CCSGG	2 cut(s)	27, 273
BcoDI	GTCTC	4 cut(s)	95, 299, 324, 575
BfaI	CTAG	3 cut(s)	726, 786, 969
BfoI	RGCGCY	4 cut(s)	42, 226, 257, 701
BfuAI	ACCTGC	1 cut(s)	823
BfuI	GTATCC	1 cut(s)	351
BglI	GCCNNNNNGGC	1 cut(s)	248
BisI	GCNGC	8 cut(s)	31, 34, 37, 42, 73, 252, 444, 554
BlnI	CCTAGG	1 cut(s)	785
BlsI	GCNGC	8 cut(s)	32, 35, 38, 43, 74, 253, 445, 555
Bme1390I	CCNGG	8 cut(s)	27, 273, 630, 702, 747, 801, 867, 941
Bme18I	GGWCC	3 cut(s)	4, 403, 668
BmeT110I	CYCGRG	1 cut(s)	98
BmgT120I	GGNCC	6 cut(s)	4, 205, 403, 668, 782, 937
BmiI	GGNNCC	9 cut(s)	19, 40, 404, 477, 528, 699, 751, 810, 871
BmrFI	CCNGG	8 cut(s)	27, 273, 630, 702, 747, 801, 867, 941
BmsI	GCATC	2 cut(s)	382, 921
BpiI	GAAGAC	1 cut(s)	938
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	651
BpuMI	CCSGG	2 cut(s)	27, 273
Bsa29I	ATCGAT	1 cut(s)	108
BsaHI	GRCGYC	2 cut(s)	39, 698
BsaI	GGTCTC	2 cut(s)	95, 324
BsaJI	CCNNGG	8 cut(s)	145, 272, 368, 664, 785, 910, 919, 940
BsaXI	ACNNNNNCTCC	2 cut(s)	610, 640
Bse1I	ACTGG	1 cut(s)	427
BseBI	CCWGG	6 cut(s)	630, 702, 747, 801, 867, 941
BseCI	ATCGAT	1 cut(s)	108
BseDI	CCNNGG	8 cut(s)	145, 272, 368, 664, 785, 910, 919, 940
BseMII	CTCAG	1 cut(s)	336
BseNI	ACTGG	1 cut(s)	427
BseRI	GAGGAG	6 cut(s)	666, 669, 672, 756, 945, 948
BseXI	GCAGC	3 cut(s)	42, 455, 565
Bsh1236I	CGCG	1 cut(s)	75
Bsh1285I	CGRYCG	1 cut(s)	70
BshFI	GGCC	7 cut(s)	206, 271, 646, 783, 790, 939, 952
BshNI	GGYRCC	3 cut(s)	38, 697, 869
BshVI	ATCGAT	1 cut(s)	108
BsiEI	CGRYCG	1 cut(s)	70
BsiHKAI	GWGCWC	2 cut(s)	628, 733
BsiHKCI	CYCGRG	1 cut(s)	98
BsiSI	CCGG	2 cut(s)	27, 272
BsmAI	GTCTC	4 cut(s)	95, 299, 324, 575
BsmBI	CGTCTC	1 cut(s)	575
BsnI	GGCC	7 cut(s)	206, 271, 646, 783, 790, 939, 952
Bso31I	GGTCTC	2 cut(s)	95, 324
BsoBI	CYCGRG	1 cut(s)	98
Bsp1286I	GDGCHC	4 cut(s)	20, 628, 733, 811
Bsp143I	GATC	4 cut(s)	109, 121, 526, 749
BspACI	CCGC	8 cut(s)	33, 36, 42, 48, 70, 73, 247, 251
BspANI	GGCC	7 cut(s)	206, 271, 646, 783, 790, 939, 952
BspCNI	CTCAG	1 cut(s)	337
BspDI	ATCGAT	1 cut(s)	108
BspFNI	CGCG	1 cut(s)	75
BspLI	GGNNCC	9 cut(s)	19, 40, 404, 477, 528, 699, 751, 810, 871
BspMI	ACCTGC	1 cut(s)	823
BspPI	GGATC	5 cut(s)	116, 521, 534, 744, 757
BspT107I	GGYRCC	3 cut(s)	38, 697, 869
BspTNI	GGTCTC	2 cut(s)	95, 324
BsrI	ACTGG	1 cut(s)	427
BssECI	CCNNGG	8 cut(s)	145, 272, 368, 664, 785, 910, 919, 940
BssMI	GATC	4 cut(s)	109, 121, 526, 749
BssNI	GRCGYC	2 cut(s)	39, 698
BssT1I	CCWWGG	5 cut(s)	368, 664, 785, 910, 919
Bst2UI	CCWGG	6 cut(s)	630, 702, 747, 801, 867, 941
Bst6I	CTCTTC	2 cut(s)	327, 332
BstACI	GRCGYC	2 cut(s)	39, 698
BstC8I	GCNNGC	2 cut(s)	77, 249
BstDEI	CTNAG	1 cut(s)	345
BstENI	CCTNNNNNAGG	1 cut(s)	687
BstFNI	CGCG	1 cut(s)	75
BstH2I	RGCGCY	4 cut(s)	42, 226, 257, 701
BstHHI	GCGC	6 cut(s)	41, 138, 225, 256, 700, 709
BstKTI	GATC	4 cut(s)	112, 124, 529, 752
BstMAI	GTCTC	4 cut(s)	95, 299, 324, 575
BstMBI	GATC	4 cut(s)	109, 121, 526, 749
BstMCI	CGRYCG	1 cut(s)	70
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 47, 248, 253, 704, 706, 815
BstNI	CCWGG	6 cut(s)	630, 702, 747, 801, 867, 941
BstSCI	CCNGG	8 cut(s)	25, 271, 628, 700, 745, 799, 865, 939
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	3 cut(s)	42, 455, 565
BstV2I	GAAGAC	1 cut(s)	938
BstX2I	RGATCY	3 cut(s)	121, 526, 749
BstYI	RGATCY	3 cut(s)	121, 526, 749
Bsu15I	ATCGAT	1 cut(s)	108
BsuI	GTATCC	1 cut(s)	351
BsuRI	GGCC	7 cut(s)	206, 271, 646, 783, 790, 939, 952
BsuTUI	ATCGAT	1 cut(s)	108
BveI	ACCTGC	1 cut(s)	823
Cac8I	GCNNGC	2 cut(s)	77, 249
CfoI	GCGC	6 cut(s)	41, 138, 225, 256, 700, 709
Cfr13I	GGNCC	6 cut(s)	4, 205, 403, 668, 782, 937
ClaI	ATCGAT	1 cut(s)	108
Csp6I	GTAC	2 cut(s)	483, 870
CviAII	CATG	2 cut(s)	133, 973
CviQI	GTAC	2 cut(s)	483, 870
DdeI	CTNAG	1 cut(s)	345
DinI	GGCGCC	2 cut(s)	40, 699
DpnI	GATC	4 cut(s)	111, 123, 528, 751
DpnII	GATC	4 cut(s)	109, 121, 526, 749
Eam1104I	CTCTTC	2 cut(s)	327, 332
EarI	CTCTTC	2 cut(s)	327, 332
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	731
Eco130I	CCWWGG	5 cut(s)	368, 664, 785, 910, 919
Eco147I	AGGCCT	2 cut(s)	646, 790
Eco24I	GRGCYC	3 cut(s)	20, 733, 811
Eco31I	GGTCTC	2 cut(s)	95, 324
Eco47I	GGWCC	3 cut(s)	4, 403, 668
Eco53kI	GAGCTC	1 cut(s)	731
Eco88I	CYCGRG	1 cut(s)	98
EcoICRI	GAGCTC	1 cut(s)	731
EcoNI	CCTNNNNNAGG	1 cut(s)	687
EcoRII	CCWGG	6 cut(s)	628, 700, 745, 799, 865, 939
EcoT14I	CCWWGG	5 cut(s)	368, 664, 785, 910, 919
EcoT38I	GRGCYC	3 cut(s)	20, 733, 811
EgeI	GGCGCC	2 cut(s)	40, 699
EheI	GGCGCC	2 cut(s)	40, 699
ErhI	CCWWGG	5 cut(s)	368, 664, 785, 910, 919
Esp3I	CGTCTC	1 cut(s)	575
FaeI	CATG	2 cut(s)	136, 976
FatI	CATG	2 cut(s)	132, 972
FauI	CCCGC	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	883
Fnu4HI	GCNGC	8 cut(s)	31, 34, 37, 42, 73, 252, 444, 554
FriOI	GRGCYC	3 cut(s)	20, 733, 811
Fsp4HI	GCNGC	8 cut(s)	31, 34, 37, 42, 73, 252, 444, 554
FspBI	CTAG	3 cut(s)	726, 786, 969
FspI	TGCGCA	1 cut(s)	137
GlaI	GCGC	6 cut(s)	40, 137, 224, 255, 699, 708
GluI	GCNGC	8 cut(s)	31, 34, 37, 42, 73, 252, 444, 554
GsuI	CTGGAG	1 cut(s)	651
HaeII	RGCGCY	4 cut(s)	42, 226, 257, 701
HaeIII	GGCC	7 cut(s)	206, 271, 646, 783, 790, 939, 952
HapII	CCGG	2 cut(s)	27, 272
HhaI	GCGC	6 cut(s)	41, 138, 225, 256, 700, 709
Hin1I	GRCGYC	2 cut(s)	39, 698
Hin1II	CATG	2 cut(s)	136, 976
Hin6I	GCGC	6 cut(s)	39, 136, 223, 254, 698, 707
HinP1I	GCGC	6 cut(s)	39, 136, 223, 254, 698, 707
HinfI	GANTC	3 cut(s)	81, 90, 533
HpaII	CCGG	2 cut(s)	27, 272
HphI	GGTGA	1 cut(s)	865
Hpy166II	GTNNAC	4 cut(s)	164, 546, 671, 884
Hpy188I	TCNGA	3 cut(s)	86, 149, 507
Hpy188III	TCNNGA	5 cut(s)	100, 331, 344, 415, 530
Hpy8I	GTNNAC	4 cut(s)	164, 546, 671, 884
Hpy99I	CGWCG	1 cut(s)	90
HpyAV	CCTTC	2 cut(s)	421, 648
HpyCH4IV	ACGT	1 cut(s)	548
HpyCH4V	TGCA	5 cut(s)	181, 362, 443, 553, 934
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 47, 248, 253, 704, 706, 815
HpyF3I	CTNAG	1 cut(s)	345
HpySE526I	ACGT	1 cut(s)	548
Hsp92I	GRCGYC	2 cut(s)	39, 698
Hsp92II	CATG	2 cut(s)	136, 976
HspAI	GCGC	6 cut(s)	39, 136, 223, 254, 698, 707
KasI	GGCGCC	2 cut(s)	38, 697
KpnI	GGTACC	1 cut(s)	873
Kzo9I	GATC	4 cut(s)	109, 121, 526, 749
LmnI	GCTCC	4 cut(s)	23, 631, 736, 814
Lsp1109I	GCAGC	3 cut(s)	42, 455, 565
LweI	GCATC	2 cut(s)	382, 921
MaeI	CTAG	3 cut(s)	726, 786, 969
MaeII	ACGT	1 cut(s)	548
MaeIII	GTNAC	2 cut(s)	194, 283
MalI	GATC	4 cut(s)	111, 123, 528, 751
MboI	GATC	4 cut(s)	109, 121, 526, 749
MboII	GAAGA	5 cut(s)	314, 319, 365, 425, 938
MflI	RGATCY	3 cut(s)	121, 526, 749
MhlI	GDGCHC	4 cut(s)	20, 628, 733, 811
MluCI	AATT	3 cut(s)	261, 462, 856
Mly113I	GGCGCC	2 cut(s)	39, 698
MlyI	GAGTC	3 cut(s)	75, 84, 527
MmeI	TCCRAC	2 cut(s)	109, 430
MseI	TTAA	2 cut(s)	471, 570
MslI	CAYNNNNRTG	2 cut(s)	186, 851
MspA1I	CMGCKG	2 cut(s)	33, 446
MspI	CCGG	2 cut(s)	27, 272
MspR9I	CCNGG	8 cut(s)	27, 273, 630, 702, 747, 801, 867, 941
MvaI	CCWGG	6 cut(s)	630, 702, 747, 801, 867, 941
MvnI	CGCG	1 cut(s)	75
MwoI	GCNNNNNNNGC	7 cut(s)	36, 47, 248, 253, 704, 706, 815
NarI	GGCGCC	2 cut(s)	39, 698
NciI	CCSGG	2 cut(s)	27, 273
NdeII	GATC	4 cut(s)	109, 121, 526, 749
NlaIII	CATG	2 cut(s)	136, 976
NlaIV	GGNNCC	9 cut(s)	19, 40, 404, 477, 528, 699, 751, 810, 871
NsbI	TGCGCA	1 cut(s)	137
OliI	CACNNNNGTG	1 cut(s)	851
PaeR7I	CTCGAG	1 cut(s)	98
PaqCI	CACCTGC	1 cut(s)	823
PceI	AGGCCT	2 cut(s)	646, 790
PcsI	WCGNNNNNNNCGW	3 cut(s)	63, 72, 105
PfoI	TCCNGGA	2 cut(s)	628, 745
PkrI	GCNGC	8 cut(s)	32, 35, 38, 43, 74, 253, 445, 555
PleI	GAGTC	3 cut(s)	75, 84, 527
PluTI	GGCGCC	2 cut(s)	42, 701
PpsI	GAGTC	3 cut(s)	75, 84, 527
Psp124BI	GAGCTC	1 cut(s)	733
Psp6I	CCWGG	6 cut(s)	628, 700, 745, 799, 865, 939
PspGI	CCWGG	6 cut(s)	628, 700, 745, 799, 865, 939
PspN4I	GGNNCC	9 cut(s)	19, 40, 404, 477, 528, 699, 751, 810, 871
PspPI	GGNCC	6 cut(s)	4, 205, 403, 668, 782, 937
PsuI	RGATCY	3 cut(s)	121, 526, 749
PvuII	CAGCTG	1 cut(s)	446
RsaI	GTAC	2 cut(s)	484, 871
RsaNI	GTAC	2 cut(s)	483, 870
RseI	CAYNNNNRTG	2 cut(s)	186, 851
SacI	GAGCTC	1 cut(s)	733
SaqAI	TTAA	2 cut(s)	471, 570
SatI	GCNGC	8 cut(s)	31, 34, 37, 42, 73, 252, 444, 554
Sau3AI	GATC	4 cut(s)	109, 121, 526, 749
Sau96I	GGNCC	6 cut(s)	4, 205, 403, 668, 782, 937
SchI	GAGTC	3 cut(s)	75, 84, 527
ScrFI	CCNGG	8 cut(s)	27, 273, 630, 702, 747, 801, 867, 941
SduI	GDGCHC	4 cut(s)	20, 628, 733, 811
SfaNI	GCATC	2 cut(s)	382, 921
SfoI	GGCGCC	2 cut(s)	40, 699
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	3 cut(s)	4, 403, 668
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	2 cut(s)	186, 851
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	3 cut(s)	261, 462, 856
SseBI	AGGCCT	2 cut(s)	646, 790
SsiI	CCGC	8 cut(s)	33, 36, 42, 48, 70, 73, 247, 251
SspDI	GGCGCC	2 cut(s)	38, 697
SspMI	CTAG	3 cut(s)	726, 786, 969
SstI	GAGCTC	1 cut(s)	733
StuI	AGGCCT	2 cut(s)	646, 790
StyD4I	CCNGG	8 cut(s)	25, 271, 628, 700, 745, 799, 865, 939
StyI	CCWWGG	5 cut(s)	368, 664, 785, 910, 919
TaiI	ACGT	1 cut(s)	551
TaqI	TCGA	4 cut(s)	66, 99, 108, 414
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	3 cut(s)	261, 462, 856
TatI	WGTACW	1 cut(s)	482
TauI	GCSGC	5 cut(s)	36, 39, 44, 75, 254
Tru1I	TTAA	2 cut(s)	471, 570
Tru9I	TTAA	2 cut(s)	471, 570
TseI	GCWGC	3 cut(s)	30, 443, 553
TspDTI	ATGAA	1 cut(s)	121
VpaK11BI	GGWCC	3 cut(s)	4, 403, 668
XagI	CCTNNNNNAGG	1 cut(s)	687
XapI	RAATTY	1 cut(s)	856
XhoI	CTCGAG	1 cut(s)	98
XmaJI	CCTAGG	1 cut(s)	785
XmiI	GTMKAC	1 cut(s)	883
XspI	CTAG	3 cut(s)	726, 786, 969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.