Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003932

Physical Location & Seq

Genomic Coordinates Forward (+)

57808178 .. 57809240

Gene Structure 1063 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGACCGAGACTGGGGTTCAAAACCCGGTGGTGGAGGCGCCGCCTCCTCCCAGAACGAAGACATCAACCGCCGCGAGCGACTCCGACGACTTGCCCTCGAGACCATCGATCTCGCCAAAGATCCATACTTCATGCGCAATCACCTCGGAAGCTATGAGTGTAAACTATGCTTGACCTTGCACAACAATGAGGGTAACTACTTGGCCCATACACAGGGAAAGCGCCACCAGACCTATCTCGCCAAGCGGGCCGCGCGTGAGGCCAAGGATATTCCTGCTCAGCCCCAGCTCCACAAGCGCAAAGTCTCCTTTCGCAAAACAGTGAAAATTGGTAGGCCGGGCTATAGAGTAACAAAGCAGTTTGATGGAGAGACAAAGCAAAGGTCTCTTCTCTTCCAGATTGAGTATCCGGAAATAGAAGATAATGCAAAGCCAAGGCATCGTTTTATGTCATCTTATGAGCAGAGGGTCCAACCCTACGAGAAAAGATACCAGTATCTTCTGTTTGCAGCCGAACCATACGAGATAATAGCTTTTAAGGTTCCTAGTACAGAGATTGACAAATCGACTCCGAACTCCGAACTATATTTCAAAGTTAAGCCACCAGAGACGAACAAACCTCAACCTCCCCCAAATGCCAATGGCACAGGTGCTCCTGGAGTTCCTTCAAGGCCTCTACCCCCACCACCCCGAGGTCCACCTCCTCCTCCTCCACAAGGAATGGCGCCTGGTGCACCTATAGCTCCACCAACTATTCCTGGATCCTTACTGCCACCTCCTCCTATGGTAAATGGCCCTGGGCCTGTGCCTCCTGGTGGGGCTCCACCTGCCCCACCTCCACCTCCTGTCAGCAATAACACAATGGTGAATTTCACTCCTGGTACCCAGGTGGGTAGACCACCGACTATGCCACCTCCACCACAAGGTTTCCAAGGACAACAGATGCAGGGCCAGGGTCTTCGTCCTCCTCCTCCTCGTACACCTCCTAGCATGGGTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010720 GO:0010975 GO:0010976 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022008 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030532 GO:0031344 GO:0031346 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046483 GO:0048518 GO:0048522 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051960 GO:0051962 GO:0060284 GO:0065003 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120035 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3A2 zf-met

Protein Analysis

333

Amino Acids

36.68

Weight (kDa)

9.97

Isoelectric Point (pI)

62.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	52 - 76	1.1e-06	Zinc-finger of C2H2 type
SF3A2	PF16835	110 - 193	6.4e-32	Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32600
fragaria_vesca	FvH4_6g16880 FvH4_6g16880 FvH4_6g16880 FvH4_6g16880
malus_domestica	MD04G1088800.v1.1 MD12G1106500.v1.1
prunus_persica	Prupe.4G071900_v2.0.a1 Prupe.7G125300_v2.0.a1 Prupe.7G125300_v2.0.a1
pyrus_communis	pycom04g08310 pycom12g10700
rosa_chinensis	RchiOBHm_Chr3g0470901 RchiOBHm_Chr7g0191101
rosa_laevigata	RLG00000024235 RLG00000025908
rosa_multiflora	Rmu_co8030388.1_g000001 Rmu_sc0005903.1_g000001 Rmu_sc0010267.1_g000002 Rmu_sc0030335.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264030 Rroxscaffold_6G00410430 Rroxscaffold_6G00426670
rosa_rugosa	Rorug03G0113500 Rorug06G0508500
rosa_samantha	Rh1AG146000 Rh1DG152700 Rh3AG163300 Rh3BG188700 Rh3CG178700 Rh3DG187400 Rh7BG118500 Rh7CG121000
rosa_wichuraiana	Rw3G015380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	835
Acc16I	TGCGCA	1 cut(s)	137
Acc36I	ACCTGC	1 cut(s)	835
Acc65I	GGTACC	1 cut(s)	881
AccB1I	GGYRCC	3 cut(s)	38, 724, 881
AccI	GTMKAC	1 cut(s)	895
AccII	CGCG	3 cut(s)	75, 254, 256
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	5 cut(s)	42, 70, 73, 247, 252
AclWI	GGATC	3 cut(s)	116, 756, 769
AcsI	RAATTY	1 cut(s)	868
AcyI	GRCGYC	2 cut(s)	39, 725
AfaI	GTAC	3 cut(s)	550, 883, 979
AfiI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 692, 716, 815, 923, 992
AgsI	TTSAA	3 cut(s)	21, 592, 669
AjnI	CCWGG	8 cut(s)	655, 727, 757, 796, 811, 877, 885, 951
AleI	CACNNNNGTG	1 cut(s)	863
AluBI	AGCT	4 cut(s)	153, 289, 533, 743
AluI	AGCT	4 cut(s)	153, 289, 533, 743
Alw21I	GWGCWC	2 cut(s)	655, 736
Alw26I	GTCTC	6 cut(s)	3, 95, 310, 365, 390, 602
Alw44I	GTGCAC	1 cut(s)	732
AlwI	GGATC	3 cut(s)	116, 756, 769
Ama87I	CYCGRG	2 cut(s)	98, 690
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	8 cut(s)	204, 249, 261, 335, 671, 793, 800, 949
ApaLI	GTGCAC	1 cut(s)	732
ApeKI	GCWGC	1 cut(s)	509
ApoI	RAATTY	1 cut(s)	868
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
Asp718I	GGTACC	1 cut(s)	881
AspLEI	GCGC	6 cut(s)	41, 138, 225, 256, 300, 727
AspS9I	GGNCC	8 cut(s)	4, 205, 249, 469, 695, 794, 800, 949
AsuC2I	CCSGG	2 cut(s)	27, 339
AsuHPI	GGTGA	2 cut(s)	134, 877
AvaI	CYCGRG	2 cut(s)	98, 690
AvaII	GGWCC	3 cut(s)	4, 469, 695
BaeGI	GKGCMC	1 cut(s)	736
BaeI	ACNNNNGTAYC	2 cut(s)	873, 906
BamHI	GGATCC	1 cut(s)	761
BanI	GGYRCC	3 cut(s)	38, 724, 881
BanII	GRGCYC	1 cut(s)	823
BbsI	GAAGAC	2 cut(s)	66, 950
Bbv12I	GWGCWC	2 cut(s)	655, 736
BbvI	GCAGC	1 cut(s)	521
BccI	CCATC	2 cut(s)	113, 359
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciT130I	CCWGG	8 cut(s)	657, 729, 759, 798, 813, 879, 887, 953
BciVI	GTATCC	1 cut(s)	417
BcnI	CCSGG	2 cut(s)	27, 339
BcoDI	GTCTC	6 cut(s)	3, 95, 310, 365, 390, 602
BfaI	CTAG	2 cut(s)	546, 987
BfmI	CTRYAG	2 cut(s)	343, 738
BfoI	RGCGCY	3 cut(s)	42, 226, 728
BfuAI	ACCTGC	1 cut(s)	835
BfuI	GTATCC	1 cut(s)	417
BglI	GCCNNNNNGGC	1 cut(s)	248
BisI	GCNGC	4 cut(s)	42, 73, 252, 510
BlpI	GCTNAGC	1 cut(s)	279
BlsI	GCNGC	4 cut(s)	43, 74, 253, 511
Bme18I	GGWCC	3 cut(s)	4, 469, 695
BmeT110I	CYCGRG	2 cut(s)	98, 690
BmgT120I	GGNCC	8 cut(s)	4, 205, 249, 469, 695, 794, 800, 949
BmiI	GGNNCC	7 cut(s)	40, 470, 543, 726, 763, 822, 883
BmrI	ACTGGG	1 cut(s)	22
BmsI	GCATC	2 cut(s)	448, 933
BmuI	ACTGGG	1 cut(s)	22
BpiI	GAAGAC	2 cut(s)	66, 950
BpmI	CTGGAG	1 cut(s)	678
Bpu1102I	GCTNAGC	1 cut(s)	279
BpuMI	CCSGG	2 cut(s)	27, 339
Bsa29I	ATCGAT	1 cut(s)	108
BsaHI	GRCGYC	2 cut(s)	39, 725
BsaI	GGTCTC	2 cut(s)	95, 390
BsaJI	CCNNGG	9 cut(s)	145, 264, 434, 691, 796, 797, 885, 931, 952
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	2 cut(s)	637, 667
Bsc4I	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 692, 716, 815, 923, 992
Bse1I	ACTGG	2 cut(s)	17, 493
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	8 cut(s)	657, 729, 759, 798, 813, 879, 887, 953
BseCI	ATCGAT	1 cut(s)	108
BseDI	CCNNGG	9 cut(s)	145, 264, 434, 691, 796, 797, 885, 931, 952
BseLI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 692, 716, 815, 923, 992
BseMII	CTCAG	1 cut(s)	293
BseNI	ACTGG	2 cut(s)	17, 493
BseRI	GAGGAG	8 cut(s)	37, 693, 696, 699, 768, 957, 960, 963
BseSI	GKGCMC	1 cut(s)	736
BseXI	GCAGC	1 cut(s)	521
BseYI	CCCAGC	1 cut(s)	285
Bsh1236I	CGCG	3 cut(s)	75, 254, 256
BshFI	GGCC	8 cut(s)	206, 251, 263, 337, 673, 795, 802, 951
BshNI	GGYRCC	3 cut(s)	38, 724, 881
BshVI	ATCGAT	1 cut(s)	108
BsiHKAI	GWGCWC	2 cut(s)	655, 736
BsiHKCI	CYCGRG	2 cut(s)	98, 690
BsiSI	CCGG	3 cut(s)	27, 338, 410
BslI	CCNNNNNNNGG	8 cut(s)	13, 32, 214, 692, 716, 815, 923, 992
BsmAI	GTCTC	6 cut(s)	3, 95, 310, 365, 390, 602
BsmBI	CGTCTC	1 cut(s)	602
BsnI	GGCC	8 cut(s)	206, 251, 263, 337, 673, 795, 802, 951
Bso31I	GGTCTC	2 cut(s)	95, 390
BsoBI	CYCGRG	2 cut(s)	98, 690
Bsp1286I	GDGCHC	3 cut(s)	655, 736, 823
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	3 cut(s)	109, 121, 761
Bsp1720I	GCTNAGC	1 cut(s)	279
BspACI	CCGC	5 cut(s)	42, 70, 73, 247, 252
BspANI	GGCC	8 cut(s)	206, 251, 263, 337, 673, 795, 802, 951
BspCNI	CTCAG	1 cut(s)	292
BspDI	ATCGAT	1 cut(s)	108
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	3 cut(s)	75, 254, 256
BspLI	GGNNCC	7 cut(s)	40, 470, 543, 726, 763, 822, 883
BspMI	ACCTGC	1 cut(s)	835
BspPI	GGATC	3 cut(s)	116, 756, 769
BspT107I	GGYRCC	3 cut(s)	38, 724, 881
BspTNI	GGTCTC	2 cut(s)	95, 390
BsrI	ACTGG	2 cut(s)	17, 493
BssECI	CCNNGG	9 cut(s)	145, 264, 434, 691, 796, 797, 885, 931, 952
BssMI	GATC	3 cut(s)	109, 121, 761
BssNI	GRCGYC	2 cut(s)	39, 725
BssT1I	CCWWGG	3 cut(s)	264, 434, 931
Bst2UI	CCWGG	8 cut(s)	657, 729, 759, 798, 813, 879, 887, 953
Bst4CI	ACNGT	1 cut(s)	322
Bst6I	CTCTTC	2 cut(s)	393, 398
BstACI	GRCGYC	2 cut(s)	39, 725
BstC8I	GCNNGC	2 cut(s)	77, 249
BstDEI	CTNAG	1 cut(s)	279
BstENI	CCTNNNNNAGG	1 cut(s)	714
BstFNI	CGCG	3 cut(s)	75, 254, 256
BstH2I	RGCGCY	3 cut(s)	42, 226, 728
BstHHI	GCGC	6 cut(s)	41, 138, 225, 256, 300, 727
BstKTI	GATC	3 cut(s)	112, 124, 764
BstMAI	GTCTC	6 cut(s)	3, 95, 310, 365, 390, 602
BstMBI	GATC	3 cut(s)	109, 121, 761
BstMWI	GCNNNNNNNGC	7 cut(s)	248, 253, 260, 295, 731, 740, 827
BstNI	CCWGG	8 cut(s)	657, 729, 759, 798, 813, 879, 887, 953
BstSFI	CTRYAG	2 cut(s)	343, 738
BstSLI	GKGCMC	1 cut(s)	736
BstUI	CGCG	3 cut(s)	75, 254, 256
BstV1I	GCAGC	1 cut(s)	521
BstV2I	GAAGAC	2 cut(s)	66, 950
BstX2I	RGATCY	2 cut(s)	121, 761
BstYI	RGATCY	2 cut(s)	121, 761
Bsu15I	ATCGAT	1 cut(s)	108
BsuI	GTATCC	1 cut(s)	417
BsuRI	GGCC	8 cut(s)	206, 251, 263, 337, 673, 795, 802, 951
BsuTUI	ATCGAT	1 cut(s)	108
BtsIMutI	CAGTG	1 cut(s)	327
BveI	ACCTGC	1 cut(s)	835
Cac8I	GCNNGC	2 cut(s)	77, 249
CfoI	GCGC	6 cut(s)	41, 138, 225, 256, 300, 727
Cfr13I	GGNCC	8 cut(s)	4, 205, 249, 469, 695, 794, 800, 949
ClaI	ATCGAT	1 cut(s)	108
Csp6I	GTAC	3 cut(s)	549, 882, 978
CviAII	CATG	2 cut(s)	133, 991
CviQI	GTAC	3 cut(s)	549, 882, 978
DdeI	CTNAG	1 cut(s)	279
DinI	GGCGCC	2 cut(s)	40, 726
DpnI	GATC	3 cut(s)	111, 123, 763
DpnII	GATC	3 cut(s)	109, 121, 761
Eam1104I	CTCTTC	2 cut(s)	393, 398
EarI	CTCTTC	2 cut(s)	393, 398
Eco130I	CCWWGG	3 cut(s)	264, 434, 931
Eco147I	AGGCCT	1 cut(s)	673
Eco24I	GRGCYC	1 cut(s)	823
Eco31I	GGTCTC	2 cut(s)	95, 390
Eco47I	GGWCC	3 cut(s)	4, 469, 695
Eco88I	CYCGRG	2 cut(s)	98, 690
EcoNI	CCTNNNNNAGG	1 cut(s)	714
EcoRII	CCWGG	8 cut(s)	655, 727, 757, 796, 811, 877, 885, 951
EcoT14I	CCWWGG	3 cut(s)	264, 434, 931
EcoT38I	GRGCYC	1 cut(s)	823
EgeI	GGCGCC	2 cut(s)	40, 726
EheI	GGCGCC	2 cut(s)	40, 726
ErhI	CCWWGG	3 cut(s)	264, 434, 931
Esp3I	CGTCTC	1 cut(s)	602
FaeI	CATG	2 cut(s)	136, 994
FatI	CATG	2 cut(s)	132, 990
FauI	CCCGC	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	895
Fnu4HI	GCNGC	4 cut(s)	42, 73, 252, 510
FriOI	GRGCYC	1 cut(s)	823
Fsp4HI	GCNGC	4 cut(s)	42, 73, 252, 510
FspBI	CTAG	2 cut(s)	546, 987
FspI	TGCGCA	1 cut(s)	137
GlaI	GCGC	6 cut(s)	40, 137, 224, 255, 299, 726
GluI	GCNGC	4 cut(s)	42, 73, 252, 510
GsaI	CCCAGC	1 cut(s)	289
GsuI	CTGGAG	1 cut(s)	678
HaeII	RGCGCY	3 cut(s)	42, 226, 728
HaeIII	GGCC	8 cut(s)	206, 251, 263, 337, 673, 795, 802, 951
HapII	CCGG	3 cut(s)	27, 338, 410
HhaI	GCGC	6 cut(s)	41, 138, 225, 256, 300, 727
Hin1I	GRCGYC	2 cut(s)	39, 725
Hin1II	CATG	2 cut(s)	136, 994
Hin6I	GCGC	6 cut(s)	39, 136, 223, 254, 298, 725
HinP1I	GCGC	6 cut(s)	39, 136, 223, 254, 298, 725
HinfI	GANTC	2 cut(s)	81, 568
HpaII	CCGG	3 cut(s)	27, 338, 410
HphI	GGTGA	2 cut(s)	134, 877
Hpy166II	GTNNAC	5 cut(s)	164, 698, 734, 896, 980
Hpy188I	TCNGA	4 cut(s)	86, 149, 573, 580
Hpy188III	TCNNGA	3 cut(s)	100, 397, 410
Hpy8I	GTNNAC	5 cut(s)	164, 698, 734, 896, 980
Hpy99I	CGWCG	1 cut(s)	90
HpyAV	CCTTC	1 cut(s)	675
HpyCH4III	ACNGT	1 cut(s)	322
HpyCH4V	TGCA	5 cut(s)	181, 428, 509, 734, 946
HpyF10VI	GCNNNNNNNGC	7 cut(s)	248, 253, 260, 295, 731, 740, 827
HpyF3I	CTNAG	1 cut(s)	279
Hsp92I	GRCGYC	2 cut(s)	39, 725
Hsp92II	CATG	2 cut(s)	136, 994
HspAI	GCGC	6 cut(s)	39, 136, 223, 254, 298, 725
KasI	GGCGCC	2 cut(s)	38, 724
Kpn2I	TCCGGA	1 cut(s)	409
KpnI	GGTACC	1 cut(s)	885
Kzo9I	GATC	3 cut(s)	109, 121, 761
LmnI	GCTCC	4 cut(s)	294, 658, 748, 826
Lsp1109I	GCAGC	1 cut(s)	521
LweI	GCATC	2 cut(s)	448, 933
MaeI	CTAG	2 cut(s)	546, 987
MaeIII	GTNAC	2 cut(s)	194, 349
MalI	GATC	3 cut(s)	111, 123, 763
MboI	GATC	3 cut(s)	109, 121, 761
MboII	GAAGA	6 cut(s)	71, 380, 385, 431, 491, 950
MflI	RGATCY	2 cut(s)	121, 761
MhlI	GDGCHC	3 cut(s)	655, 736, 823
MluCI	AATT	2 cut(s)	327, 868
Mly113I	GGCGCC	2 cut(s)	39, 725
MlyI	GAGTC	2 cut(s)	75, 562
MmeI	TCCRAC	2 cut(s)	109, 496
MroI	TCCGGA	1 cut(s)	409
MseI	TTAA	3 cut(s)	537, 597, 1000
MslI	CAYNNNNRTG	2 cut(s)	186, 863
MspI	CCGG	3 cut(s)	27, 338, 410
MvaI	CCWGG	8 cut(s)	657, 729, 759, 798, 813, 879, 887, 953
MvnI	CGCG	3 cut(s)	75, 254, 256
MwoI	GCNNNNNNNGC	7 cut(s)	248, 253, 260, 295, 731, 740, 827
NarI	GGCGCC	2 cut(s)	39, 725
NciI	CCSGG	2 cut(s)	27, 339
NdeII	GATC	3 cut(s)	109, 121, 761
NlaIII	CATG	2 cut(s)	136, 994
NlaIV	GGNNCC	7 cut(s)	40, 470, 543, 726, 763, 822, 883
NsbI	TGCGCA	1 cut(s)	137
OliI	CACNNNNGTG	1 cut(s)	863
PaeR7I	CTCGAG	1 cut(s)	98
PaqCI	CACCTGC	1 cut(s)	835
PasI	CCCWGGG	1 cut(s)	797
PceI	AGGCCT	1 cut(s)	673
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PfoI	TCCNGGA	2 cut(s)	655, 757
PkrI	GCNGC	4 cut(s)	43, 74, 253, 511
PleI	GAGTC	2 cut(s)	75, 562
PluTI	GGCGCC	2 cut(s)	42, 728
PpsI	GAGTC	2 cut(s)	75, 562
Psp6I	CCWGG	8 cut(s)	655, 727, 757, 796, 811, 877, 885, 951
PspFI	CCCAGC	1 cut(s)	285
PspGI	CCWGG	8 cut(s)	655, 727, 757, 796, 811, 877, 885, 951
PspN4I	GGNNCC	7 cut(s)	40, 470, 543, 726, 763, 822, 883
PspPI	GGNCC	8 cut(s)	4, 205, 249, 469, 695, 794, 800, 949
PsuI	RGATCY	2 cut(s)	121, 761
RsaI	GTAC	3 cut(s)	550, 883, 979
RsaNI	GTAC	3 cut(s)	549, 882, 978
RseI	CAYNNNNRTG	2 cut(s)	186, 863
SaqAI	TTAA	3 cut(s)	537, 597, 1000
SatI	GCNGC	4 cut(s)	42, 73, 252, 510
Sau3AI	GATC	3 cut(s)	109, 121, 761
Sau96I	GGNCC	8 cut(s)	4, 205, 249, 469, 695, 794, 800, 949
SchI	GAGTC	2 cut(s)	75, 562
SduI	GDGCHC	3 cut(s)	655, 736, 823
SfaNI	GCATC	2 cut(s)	448, 933
SfcI	CTRYAG	2 cut(s)	343, 738
SfoI	GGCGCC	2 cut(s)	40, 726
Sfr274I	CTCGAG	1 cut(s)	98
SinI	GGWCC	3 cut(s)	4, 469, 695
SlaI	CTCGAG	1 cut(s)	98
SmiMI	CAYNNNNRTG	2 cut(s)	186, 863
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
Sse9I	AATT	2 cut(s)	327, 868
SseBI	AGGCCT	1 cut(s)	673
SsiI	CCGC	5 cut(s)	42, 70, 73, 247, 252
SspDI	GGCGCC	2 cut(s)	38, 724
SspMI	CTAG	2 cut(s)	546, 987
StuI	AGGCCT	1 cut(s)	673
StyI	CCWWGG	3 cut(s)	264, 434, 931
TaaI	ACNGT	1 cut(s)	322
TaqI	TCGA	3 cut(s)	99, 108, 566
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	2 cut(s)	327, 868
TatI	WGTACW	1 cut(s)	548
TauI	GCSGC	3 cut(s)	44, 75, 254
Tru1I	TTAA	3 cut(s)	537, 597, 1000
Tru9I	TTAA	3 cut(s)	537, 597, 1000
TscAI	CASTG	1 cut(s)	327
TseI	GCWGC	1 cut(s)	509
TspDTI	ATGAA	1 cut(s)	121
TspRI	CASTG	1 cut(s)	327
VneI	GTGCAC	1 cut(s)	732
VpaK11BI	GGWCC	3 cut(s)	4, 469, 695
XagI	CCTNNNNNAGG	1 cut(s)	714
XapI	RAATTY	1 cut(s)	868
XhoI	CTCGAG	1 cut(s)	98
XmiI	GTMKAC	1 cut(s)	895
XspI	CTAG	2 cut(s)	546, 987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.