Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0003932

Physical Location & Seq

Genomic Coordinates Reverse (-)

31838525 .. 31885768

Gene Structure 47244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG152700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGGACCGAGAGTGGGGTTCAAAGCCCGGAGGTGGAGGCTCCACCTCCGCCCAGAACGAAGCCATCGACCGCCGCGAGCGACTCCGACAACTTGCCCTCGAGACCATTGATCTCGCCAAAGATCCATACTTCATGCACAATCACCTCGGAAGCTATGAGTGTAAACTTTGCTTGACCTTGCACAACAATGAGGGTAACTACTTGGCCCATACACAGGGAAAGCGCCACCAGACCTATCTCGCCAAGCGGGCCGCGCGTGAGGCCAAGGATATTCCTGCTCAGCCCCAGCCCCACAAGCACAAAGTCTCCGTTCGCAAAACAATGAAAATTGGTAGGCCGGGCTATAGAGTAACAAAGCAGTTTGATAGAGAGACAAAGCAAAGGTCTCTTCTCTTCCAGATTGAGTATCCGGAAATAGAAGATAATGCAAAGCCAAGGCATCGTTTTATGTCATCTTATGAGCAGAGGGTCCAACCCTATGAGAAAAGATACCAGTATCTTCTGTTTGCAGCCGAACCATACGAGATAATTGCTTTTAAGGTTCCTAGTACAGAGATTGACAAATCGACTCCGAAGTTCTTCTCACACTGGGATCCAGACTCCAAAATGTTCACGTTGCAGCTATATTTCAAAGTTAAGCCACCAGAGACGAACAAACCTCAACCTCCCCCAAATGTCATTGGCACAGGTGCTCCTGGAGTTCCTTCAAGGCCTCTACCCCCACCACCCCGAGGTCCACCTCCTCCTCCTCCACAAGGAATGGAGCCTAGTGCACCTATGGGAAACCCTCCTAGAGCTCCACCAACTATTCCTGGTTCCTTACTGCCACCTCCTCCTATGGTAAATGGTCCTGGGCCTATGCCTCCTGGTGGGGCTCCACCTGCCCCACCTTCACCTCCTGTCAGCAATAACACAATGAAACTCGAGCAATACCAGATAGAAAACAAAACAGATGCATTAGAGTACTTCACCGGCGAAATTATACTACAGGCTCGCACTTGTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010720 GO:0010975 GO:0010976 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022008 GO:0022607 GO:0022613 GO:0022618 GO:0030154 GO:0030532 GO:0031344 GO:0031346 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046483 GO:0048518 GO:0048522 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051960 GO:0051962 GO:0060284 GO:0065003 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097525 GO:0120035 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1990904 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3A2 zf-met

Protein Analysis

335

Amino Acids

37.66

Weight (kDa)

9.47

Isoelectric Point (pI)

61.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-met	PF12874	52 - 76	1.1e-06	Zinc-finger of C2H2 type
SF3A2	PF16835	110 - 204	3.3e-37	Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32600
fragaria_vesca	FvH4_6g16880 FvH4_6g16880 FvH4_6g16880 FvH4_6g16880
malus_domestica	MD04G1088800.v1.1 MD12G1106500.v1.1
prunus_persica	Prupe.4G071900_v2.0.a1 Prupe.7G125300_v2.0.a1 Prupe.7G125300_v2.0.a1
pyrus_communis	pycom04g08310 pycom12g10700
rosa_chinensis	RchiOBHm_Chr3g0470901 RchiOBHm_Chr7g0191101
rosa_laevigata	RLG00000024235 RLG00000025908
rosa_multiflora	Rmu_co8030388.1_g000001 Rmu_sc0005903.1_g000001 Rmu_sc0010267.1_g000002 Rmu_sc0030335.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264030 Rroxscaffold_6G00410430 Rroxscaffold_6G00426670
rosa_rugosa	Rorug03G0113500 Rorug06G0508500
rosa_samantha	Rh1AG146000 Rh1DG152700 Rh3AG163300 Rh3BG188700 Rh3CG178700 Rh3DG187400 Rh7BG118500 Rh7CG121000
rosa_wichuraiana	Rw3G015380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	889
Acc36I	ACCTGC	1 cut(s)	889
AccII	CGCG	3 cut(s)	75, 254, 256
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	5 cut(s)	48, 70, 73, 247, 252
AclWI	GGATC	3 cut(s)	116, 587, 600
AfaI	GTAC	2 cut(s)	550, 965
AfiI	CCNNNNNNNGG	6 cut(s)	13, 32, 214, 731, 755, 869
AgsI	TTSAA	3 cut(s)	21, 631, 708
AjnI	CCWGG	4 cut(s)	694, 811, 850, 865
AluBI	AGCT	3 cut(s)	153, 622, 797
AluI	AGCT	3 cut(s)	153, 622, 797
Alw21I	GWGCWC	3 cut(s)	694, 775, 799
Alw26I	GTCTC	5 cut(s)	95, 310, 365, 390, 641
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	3 cut(s)	116, 587, 600
Ama87I	CYCGRG	3 cut(s)	98, 729, 923
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	6 cut(s)	204, 249, 261, 335, 710, 854
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	2 cut(s)	509, 619
ArsI	GACNNNNNNTTYG	2 cut(s)	368, 400
Asp700I	GAANNNNTTC	1 cut(s)	578
AspLEI	GCGC	2 cut(s)	225, 256
AspS9I	GGNCC	7 cut(s)	4, 205, 249, 469, 734, 848, 854
AsuC2I	CCSGG	2 cut(s)	27, 339
AsuHPI	GGTGA	3 cut(s)	134, 885, 961
AvaI	CYCGRG	3 cut(s)	98, 729, 923
AvaII	GGWCC	4 cut(s)	4, 469, 734, 848
BaeGI	GKGCMC	1 cut(s)	775
BamHI	GGATCC	1 cut(s)	592
BanII	GRGCYC	2 cut(s)	799, 877
Bbv12I	GWGCWC	3 cut(s)	694, 775, 799
BbvI	GCAGC	2 cut(s)	521, 631
BccI	CCATC	1 cut(s)	71
BcgI	CGANNNNNNTGC	2 cut(s)	512, 546
BciT130I	CCWGG	4 cut(s)	696, 813, 852, 867
BciVI	GTATCC	1 cut(s)	417
BcnI	CCSGG	2 cut(s)	27, 339
BcoDI	GTCTC	5 cut(s)	95, 310, 365, 390, 641
BfaI	CTAG	3 cut(s)	546, 768, 792
BfmI	CTRYAG	2 cut(s)	343, 986
BfoI	RGCGCY	1 cut(s)	226
BfuAI	ACCTGC	1 cut(s)	889
BfuI	GTATCC	1 cut(s)	417
BglI	GCCNNNNNGGC	1 cut(s)	248
BisI	GCNGC	4 cut(s)	73, 252, 510, 620
BlpI	GCTNAGC	1 cut(s)	279
BlsI	GCNGC	4 cut(s)	74, 253, 511, 621
BmcAI	AGTACT	1 cut(s)	965
Bme1390I	CCNGG	6 cut(s)	27, 339, 696, 813, 852, 867
Bme18I	GGWCC	4 cut(s)	4, 469, 734, 848
BmeT110I	CYCGRG	3 cut(s)	98, 729, 923
BmgT120I	GGNCC	7 cut(s)	4, 205, 249, 469, 734, 848, 854
BmiI	GGNNCC	7 cut(s)	40, 470, 543, 594, 765, 817, 876
BmrFI	CCNGG	6 cut(s)	27, 339, 696, 813, 852, 867
BmrI	ACTGGG	1 cut(s)	598
BmsI	GCATC	2 cut(s)	448, 943
BmuI	ACTGGG	1 cut(s)	598
BpmI	CTGGAG	1 cut(s)	717
Bpu1102I	GCTNAGC	1 cut(s)	279
BpuMI	CCSGG	2 cut(s)	27, 339
BsaI	GGTCTC	2 cut(s)	95, 390
BsaJI	CCNNGG	5 cut(s)	145, 264, 434, 730, 851
BsaWI	WCCGGW	1 cut(s)	409
BsaXI	ACNNNNNCTCC	4 cut(s)	290, 320, 676, 706
Bsc4I	CCNNNNNNNGG	6 cut(s)	13, 32, 214, 731, 755, 869
Bse118I	RCCGGY	1 cut(s)	971
Bse1I	ACTGG	2 cut(s)	493, 593
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	4 cut(s)	696, 813, 852, 867
BseDI	CCNNGG	5 cut(s)	145, 264, 434, 730, 851
BseLI	CCNNNNNNNGG	6 cut(s)	13, 32, 214, 731, 755, 869
BseMII	CTCAG	1 cut(s)	293
BseNI	ACTGG	2 cut(s)	493, 593
BseRI	GAGGAG	4 cut(s)	732, 735, 738, 822
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	2 cut(s)	521, 631
BseYI	CCCAGC	1 cut(s)	285
Bsh1236I	CGCG	3 cut(s)	75, 254, 256
Bsh1285I	CGRYCG	1 cut(s)	70
BshFI	GGCC	6 cut(s)	206, 251, 263, 337, 712, 856
BsiEI	CGRYCG	1 cut(s)	70
BsiHKAI	GWGCWC	3 cut(s)	694, 775, 799
BsiHKCI	CYCGRG	3 cut(s)	98, 729, 923
BsiSI	CCGG	4 cut(s)	27, 338, 410, 972
BslI	CCNNNNNNNGG	6 cut(s)	13, 32, 214, 731, 755, 869
BsmAI	GTCTC	5 cut(s)	95, 310, 365, 390, 641
BsmBI	CGTCTC	1 cut(s)	641
BsnI	GGCC	6 cut(s)	206, 251, 263, 337, 712, 856
Bso31I	GGTCTC	2 cut(s)	95, 390
BsoBI	CYCGRG	3 cut(s)	98, 729, 923
Bsp1286I	GDGCHC	4 cut(s)	694, 775, 799, 877
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	3 cut(s)	109, 121, 592
Bsp1720I	GCTNAGC	1 cut(s)	279
BspACI	CCGC	5 cut(s)	48, 70, 73, 247, 252
BspANI	GGCC	6 cut(s)	206, 251, 263, 337, 712, 856
BspCNI	CTCAG	1 cut(s)	292
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	3 cut(s)	75, 254, 256
BspLI	GGNNCC	7 cut(s)	40, 470, 543, 594, 765, 817, 876
BspMI	ACCTGC	1 cut(s)	889
BspPI	GGATC	3 cut(s)	116, 587, 600
BspTNI	GGTCTC	2 cut(s)	95, 390
BsrFI	RCCGGY	1 cut(s)	971
BsrI	ACTGG	2 cut(s)	493, 593
BssAI	RCCGGY	1 cut(s)	971
BssECI	CCNNGG	5 cut(s)	145, 264, 434, 730, 851
BssMI	GATC	3 cut(s)	109, 121, 592
BssT1I	CCWWGG	2 cut(s)	264, 434
Bst2UI	CCWGG	4 cut(s)	696, 813, 852, 867
Bst6I	CTCTTC	2 cut(s)	393, 398
BstC8I	GCNNGC	3 cut(s)	77, 249, 994
BstDEI	CTNAG	1 cut(s)	279
BstENI	CCTNNNNNAGG	1 cut(s)	753
BstFNI	CGCG	3 cut(s)	75, 254, 256
BstH2I	RGCGCY	1 cut(s)	226
BstHHI	GCGC	2 cut(s)	225, 256
BstKTI	GATC	3 cut(s)	112, 124, 595
BstMAI	GTCTC	5 cut(s)	95, 310, 365, 390, 641
BstMBI	GATC	3 cut(s)	109, 121, 592
BstMCI	CGRYCG	1 cut(s)	70
BstMWI	GCNNNNNNNGC	5 cut(s)	248, 253, 260, 295, 881
BstNI	CCWGG	4 cut(s)	696, 813, 852, 867
BstSCI	CCNGG	6 cut(s)	25, 337, 694, 811, 850, 865
BstSFI	CTRYAG	2 cut(s)	343, 986
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	3 cut(s)	75, 254, 256
BstV1I	GCAGC	2 cut(s)	521, 631
BstX2I	RGATCY	2 cut(s)	121, 592
BstYI	RGATCY	2 cut(s)	121, 592
BsuI	GTATCC	1 cut(s)	417
BsuRI	GGCC	6 cut(s)	206, 251, 263, 337, 712, 856
BtsIMutI	CAGTG	1 cut(s)	586
BveI	ACCTGC	1 cut(s)	889
Cac8I	GCNNGC	3 cut(s)	77, 249, 994
CfoI	GCGC	2 cut(s)	225, 256
Cfr10I	RCCGGY	1 cut(s)	971
Cfr13I	GGNCC	7 cut(s)	4, 205, 249, 469, 734, 848, 854
Csp6I	GTAC	2 cut(s)	549, 964
CviAII	CATG	1 cut(s)	133
CviQI	GTAC	2 cut(s)	549, 964
DdeI	CTNAG	1 cut(s)	279
DpnI	GATC	3 cut(s)	111, 123, 594
DpnII	GATC	3 cut(s)	109, 121, 592
Eam1104I	CTCTTC	2 cut(s)	393, 398
EarI	CTCTTC	2 cut(s)	393, 398
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	797
Eco130I	CCWWGG	2 cut(s)	264, 434
Eco147I	AGGCCT	1 cut(s)	712
Eco24I	GRGCYC	2 cut(s)	799, 877
Eco31I	GGTCTC	2 cut(s)	95, 390
Eco47I	GGWCC	4 cut(s)	4, 469, 734, 848
Eco53kI	GAGCTC	1 cut(s)	797
Eco88I	CYCGRG	3 cut(s)	98, 729, 923
EcoICRI	GAGCTC	1 cut(s)	797
EcoNI	CCTNNNNNAGG	1 cut(s)	753
EcoRII	CCWGG	4 cut(s)	694, 811, 850, 865
EcoT14I	CCWWGG	2 cut(s)	264, 434
EcoT22I	ATGCAT	1 cut(s)	958
EcoT38I	GRGCYC	2 cut(s)	799, 877
ErhI	CCWWGG	2 cut(s)	264, 434
Esp3I	CGTCTC	1 cut(s)	641
FaeI	CATG	1 cut(s)	136
FatI	CATG	1 cut(s)	132
FauI	CCCGC	1 cut(s)	240
Fnu4HI	GCNGC	4 cut(s)	73, 252, 510, 620
FriOI	GRGCYC	2 cut(s)	799, 877
Fsp4HI	GCNGC	4 cut(s)	73, 252, 510, 620
FspBI	CTAG	3 cut(s)	546, 768, 792
GlaI	GCGC	2 cut(s)	224, 255
GluI	GCNGC	4 cut(s)	73, 252, 510, 620
GsaI	CCCAGC	1 cut(s)	289
GsuI	CTGGAG	1 cut(s)	717
HaeII	RGCGCY	1 cut(s)	226
HaeIII	GGCC	6 cut(s)	206, 251, 263, 337, 712, 856
HapII	CCGG	4 cut(s)	27, 338, 410, 972
HhaI	GCGC	2 cut(s)	225, 256
Hin1II	CATG	1 cut(s)	136
Hin6I	GCGC	2 cut(s)	223, 254
HinP1I	GCGC	2 cut(s)	223, 254
HinfI	GANTC	3 cut(s)	81, 568, 599
HpaII	CCGG	4 cut(s)	27, 338, 410, 972
HphI	GGTGA	3 cut(s)	134, 885, 961
Hpy166II	GTNNAC	4 cut(s)	164, 612, 737, 773
Hpy188I	TCNGA	3 cut(s)	86, 149, 573
Hpy188III	TCNNGA	4 cut(s)	100, 397, 410, 596
Hpy8I	GTNNAC	4 cut(s)	164, 612, 737, 773
HpyAV	CCTTC	2 cut(s)	714, 900
HpyCH4IV	ACGT	1 cut(s)	614
HpyCH4V	TGCA	7 cut(s)	136, 181, 428, 509, 619, 773, 956
HpyF10VI	GCNNNNNNNGC	5 cut(s)	248, 253, 260, 295, 881
HpyF3I	CTNAG	1 cut(s)	279
HpySE526I	ACGT	1 cut(s)	614
Hsp92II	CATG	1 cut(s)	136
HspAI	GCGC	2 cut(s)	223, 254
Kpn2I	TCCGGA	1 cut(s)	409
Kzo9I	GATC	3 cut(s)	109, 121, 592
LmnI	GCTCC	5 cut(s)	44, 697, 763, 802, 880
Lsp1109I	GCAGC	2 cut(s)	521, 631
LweI	GCATC	2 cut(s)	448, 943
MaeI	CTAG	3 cut(s)	546, 768, 792
MaeII	ACGT	1 cut(s)	614
MaeIII	GTNAC	2 cut(s)	194, 349
MalI	GATC	3 cut(s)	111, 123, 594
MboI	GATC	3 cut(s)	109, 121, 592
MboII	GAAGA	5 cut(s)	380, 385, 431, 491, 571
MflI	RGATCY	2 cut(s)	121, 592
MhlI	GDGCHC	4 cut(s)	694, 775, 799, 877
MluCI	AATT	3 cut(s)	327, 528, 978
MlyI	GAGTC	3 cut(s)	75, 562, 593
MmeI	TCCRAC	2 cut(s)	109, 496
Mph1103I	ATGCAT	1 cut(s)	958
MroI	TCCGGA	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	578
MseI	TTAA	2 cut(s)	537, 636
MslI	CAYNNNNRTG	1 cut(s)	186
MspI	CCGG	4 cut(s)	27, 338, 410, 972
MspR9I	CCNGG	6 cut(s)	27, 339, 696, 813, 852, 867
MvaI	CCWGG	4 cut(s)	696, 813, 852, 867
MvnI	CGCG	3 cut(s)	75, 254, 256
MwoI	GCNNNNNNNGC	5 cut(s)	248, 253, 260, 295, 881
NciI	CCSGG	2 cut(s)	27, 339
NdeII	GATC	3 cut(s)	109, 121, 592
NlaIII	CATG	1 cut(s)	136
NlaIV	GGNNCC	7 cut(s)	40, 470, 543, 594, 765, 817, 876
NsiI	ATGCAT	1 cut(s)	958
PaeR7I	CTCGAG	2 cut(s)	98, 923
PaqCI	CACCTGC	1 cut(s)	889
PceI	AGGCCT	1 cut(s)	712
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 72
PdmI	GAANNNNTTC	1 cut(s)	578
PfoI	TCCNGGA	1 cut(s)	694
PkrI	GCNGC	4 cut(s)	74, 253, 511, 621
PleI	GAGTC	3 cut(s)	75, 562, 593
PpsI	GAGTC	3 cut(s)	75, 562, 593
Psp124BI	GAGCTC	1 cut(s)	799
Psp6I	CCWGG	4 cut(s)	694, 811, 850, 865
PspFI	CCCAGC	1 cut(s)	285
PspGI	CCWGG	4 cut(s)	694, 811, 850, 865
PspN4I	GGNNCC	7 cut(s)	40, 470, 543, 594, 765, 817, 876
PspPI	GGNCC	7 cut(s)	4, 205, 249, 469, 734, 848, 854
PspXI	VCTCGAGB	1 cut(s)	923
PsuI	RGATCY	2 cut(s)	121, 592
RsaI	GTAC	2 cut(s)	550, 965
RsaNI	GTAC	2 cut(s)	549, 964
RseI	CAYNNNNRTG	1 cut(s)	186
SacI	GAGCTC	1 cut(s)	799
SaqAI	TTAA	2 cut(s)	537, 636
SatI	GCNGC	4 cut(s)	73, 252, 510, 620
Sau3AI	GATC	3 cut(s)	109, 121, 592
Sau96I	GGNCC	7 cut(s)	4, 205, 249, 469, 734, 848, 854
ScaI	AGTACT	1 cut(s)	965
SchI	GAGTC	3 cut(s)	75, 562, 593
ScrFI	CCNGG	6 cut(s)	27, 339, 696, 813, 852, 867
SduI	GDGCHC	4 cut(s)	694, 775, 799, 877
SfaNI	GCATC	2 cut(s)	448, 943
SfcI	CTRYAG	2 cut(s)	343, 986
Sfr274I	CTCGAG	2 cut(s)	98, 923
SgrAI	CRCCGGYG	1 cut(s)	971
SinI	GGWCC	4 cut(s)	4, 469, 734, 848
SlaI	CTCGAG	2 cut(s)	98, 923
SmiMI	CAYNNNNRTG	1 cut(s)	186
SmlI	CTYRAG	2 cut(s)	98, 923
SmoI	CTYRAG	2 cut(s)	98, 923
Sse9I	AATT	3 cut(s)	327, 528, 978
SseBI	AGGCCT	1 cut(s)	712
SsiI	CCGC	5 cut(s)	48, 70, 73, 247, 252
SspMI	CTAG	3 cut(s)	546, 768, 792
SstI	GAGCTC	1 cut(s)	799
StuI	AGGCCT	1 cut(s)	712
StyD4I	CCNGG	6 cut(s)	25, 337, 694, 811, 850, 865
StyI	CCWWGG	2 cut(s)	264, 434
TaiI	ACGT	1 cut(s)	617
TaqI	TCGA	4 cut(s)	66, 99, 566, 924
TaqII	GACCGA	1 cut(s)	21
TasI	AATT	3 cut(s)	327, 528, 978
TatI	WGTACW	2 cut(s)	548, 963
TauI	GCSGC	2 cut(s)	75, 254
Tru1I	TTAA	2 cut(s)	537, 636
Tru9I	TTAA	2 cut(s)	537, 636
TscAI	CASTG	1 cut(s)	593
TseI	GCWGC	2 cut(s)	509, 619
TspDTI	ATGAA	3 cut(s)	121, 338, 932
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	1 cut(s)	593
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	4 cut(s)	4, 469, 734, 848
XagI	CCTNNNNNAGG	1 cut(s)	753
XhoI	CTCGAG	2 cut(s)	98, 923
XmnI	GAANNNNTTC	1 cut(s)	578
XspI	CTAG	3 cut(s)	546, 768, 792
ZrmI	AGTACT	1 cut(s)	965
Zsp2I	ATGCAT	1 cut(s)	958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.