Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Reverse (-)

10941543 .. 10943666

Gene Structure 2124 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17204

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGATGATGATGATGATAAGCTCCATCTCGCCCTTACCAGCTCCTCCTACTTCTGTCACGACACATACAAAGCCTATTGCCATCATCCCTCCACCTCCAGAAACAGCAAAAATCATCAACAAAACTGCCAAGCACGTTTCCAAGAATGGACCGAAATTTGAGACGAAGGTCATCACTGAAAAGACTAGACTAAATCCAGATCCAAAATTCGACTTTTTGAATTCCTCACATCCCTACCATGCATATTATCAGCACCGGGTGGCCGCGTTCCTTTCCCAGCCTGATCAGTCTTCTGAAGAGCCGGCTCCAGTTGTAGATGTTAAAGCTGGAACACCAAAGCCTGATTCCCTCTCCCAGCTTAGACCTGAATGCAAAGTGCCCGAACCATCAGAACCCGAAGAGTTTACTGTTCAGCTCCCTCAAGGAATTAGTGGAGAAGAACTGGATGTTATGAAGCTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGTAGAGAGAGTAAAAACCCCCAGTTCTATTTTCTCAATCATAAACATAGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATGCATATTCAAAGGTGTTGATGCCACAAGGGATGACAGAGAAACTGAAGAAGAACGCGGCGGACATGACCATCGTGCTAGAGCGGTGTGTGCATCGGCTGGGGTGGGAGCACTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTTCTCCGCTGAGCCTTGAAGAGGTTATAAGTAGGAGCAAAGTCGTTATGGAAGCAGATGATAATGTCGAGGAGTATAGGGATGTTGAAATGGATTTGGATGAAGAAGAGATGCAGCTTGTTGAAGAAGGCATGAAAGTAACGGAGGTGGAACAAGCACCAATGAGAATTGTGAAGAACTGGAAGAGACCCGAGGAGAGGATGATCCAATCCAGTGCCGAAAGAGACATGACGATTTCCCCCATTACCGGGGAGCTTGTACCTAACAATGAGATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGTCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGACATTGGAAAGCAAGAAAAGCAACAGTTCATATGGGATGGTCATGCTGGAAGCACTGGCCGCGCAGCAAATCAAGCCATGTCACAGAATGCCAATGGGGGTGATAAAACCGATGTTGTGAACAATGAGGCAAGGAACCTTCCTGGTCCGGCGAGACCTTCAGTTCTTCCTCTTCCACCACCTGGTGTTCTTGCCGTTAATCTTCCTAGTGTTCCTGCAAACACAGTTCAGTACGCAGGTACAAATAGCAGTGATTTCCCTGTCCAATTTCCATTGGTTAAGACTACTATGCCTCCGTCAGTGTTTATGTCTGCAGCTAGTATACCTGTACCTCCTCCACCTGTGTCTGAGTTTATAACCATGCAAATGGCCTACATACCTACAAACACAATGCCGATGCCTCCACCGCCTTTGCCTCATGTGCAGCCACCAACACCTCCGCATGCAGAACCTAAGCCAAAGCGACAGAAGCTTGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCATCCGGGACCGGTCGACATCAATATATCTGTTCCCATTGTTAACGAAGATAACCTCATAGGACAACTTTTGGAGATCACAGTGCAGTCTTTATCAGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGGGGAAATCCAGCTTCCGGCAAACAAACAGAAATTGAGTGGAAATACGGGCTTTCTAAAAGACAATTTAGAAAGAGATGAACGGTTTGCTGCAATTTTCAACTATGTATCATTTATGACTTCTGTTATTCCTTTTACCTTCTTTGCTATTATATTACAGATTTTGTCTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

707

Amino Acids

79.25

Weight (kDa)

5.15

Isoelectric Point (pI)

54.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	37 - 90	2.9e-17	Surp module
Surp	PF01805	148 - 199	1.7e-17	Surp module
PRP21_like_P	PF12230	217 - 416	8.7e-47	Pre-mRNA splicing factor PRP21 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	863, 1661, 2122
Acc36I	ACCTGC	1 cut(s)	1532
AccB7I	CCANNNNNTGG	1 cut(s)	1487
AccBSI	CCGCTC	1 cut(s)	673
AccI	GTMKAC	2 cut(s)	1627, 1836
AccII	CGCG	3 cut(s)	266, 647, 1368
AciI	CCGC	9 cut(s)	264, 587, 647, 650, 673, 842, 1366, 1712, 1745
AclWI	GGATC	3 cut(s)	194, 1033, 1133
AcoI	YGGCCR	2 cut(s)	261, 1363
AcsI	RAATTY	5 cut(s)	155, 206, 220, 1808, 1944
AcuI	CTGAAG	4 cut(s)	315, 656, 750, 1449
AdeI	CACNNNGTG	2 cut(s)	259, 1490
AfaI	GTAC	4 cut(s)	1095, 1538, 1546, 1635
AfiI	CCNNNNNNNGG	6 cut(s)	856, 1032, 1082, 1083, 1487, 1966
AgeI	ACCGGT	1 cut(s)	1831
AgsI	TTSAA	8 cut(s)	220, 568, 600, 854, 923, 959, 1788, 2050
AhlI	ACTAGT	1 cut(s)	1190
AjnI	CCWGG	2 cut(s)	1447, 1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	328, 360
Alw21I	GWGCWC	2 cut(s)	702, 1119
Alw26I	GTCTC	5 cut(s)	155, 1015, 1053, 1181, 1453
AlwI	GGATC	3 cut(s)	194, 1033, 1133
AlwNI	CAGNNNCTG	1 cut(s)	1922
Ama87I	CYCGRG	1 cut(s)	1025
AoxI	GGCC	3 cut(s)	261, 1363, 1674
ApeKI	GCWGC	6 cut(s)	764, 949, 1370, 1619, 1729, 2039
ApoI	RAATTY	5 cut(s)	155, 206, 220, 1808, 1944
AsiGI	ACCGGT	1 cut(s)	1831
AspLEI	GCGC	1 cut(s)	1370
AspS9I	GGNCC	3 cut(s)	149, 1451, 1829
AsuC2I	CCSGG	3 cut(s)	257, 1084, 1827
AsuHPI	GGTGA	1 cut(s)	1418
AvaI	CYCGRG	1 cut(s)	1025
AvaII	GGWCC	3 cut(s)	149, 1451, 1829
BaeGI	GKGCMC	1 cut(s)	381
BbsI	GAAGAC	2 cut(s)	282, 731
Bbv12I	GWGCWC	2 cut(s)	702, 1119
BbvI	GCAGC	6 cut(s)	751, 961, 1382, 1631, 1741, 2026
BccI	CCATC	5 cut(s)	32, 89, 394, 668, 1337
BceAI	ACGGC	1 cut(s)	1484
BciT130I	CCWGG	2 cut(s)	1449, 1488
BclI	TGATCA	1 cut(s)	283
BcnI	CCSGG	3 cut(s)	257, 1084, 1827
BcoDI	GTCTC	5 cut(s)	155, 1015, 1053, 1181, 1453
BcuI	ACTAGT	1 cut(s)	1190
BfaI	CTAG	5 cut(s)	186, 668, 1191, 1512, 1623
BfmI	CTRYAG	1 cut(s)	1617
BfuAI	ACCTGC	1 cut(s)	1532
BglII	AGATCT	1 cut(s)	1218
BisI	GCNGC	9 cut(s)	264, 648, 765, 950, 1366, 1371, 1620, 1730, 2040
BlpI	GCTNAGC	1 cut(s)	845
BlsI	GCNGC	9 cut(s)	265, 649, 766, 951, 1367, 1372, 1621, 1731, 2041
Bme1390I	CCNGG	5 cut(s)	257, 1084, 1449, 1488, 1827
Bme18I	GGWCC	3 cut(s)	149, 1451, 1829
BmeT110I	CYCGRG	1 cut(s)	1025
BmgT120I	GGNCC	3 cut(s)	149, 1451, 1829
BmiI	GGNNCC	4 cut(s)	306, 1270, 1442, 1830
BmrFI	CCNGG	5 cut(s)	257, 1084, 1449, 1488, 1827
BmrI	ACTGGG	2 cut(s)	460, 526
BmsI	GCATC	6 cut(s)	580, 600, 691, 936, 1692, 1831
BmuI	ACTGGG	2 cut(s)	460, 526
BoxI	GACNNNNGTC	1 cut(s)	167
BpiI	GAAGAC	2 cut(s)	282, 731
BpmI	CTGGAG	2 cut(s)	81, 291
Bpu10I	CCTNAGC	2 cut(s)	1206, 1758
Bpu1102I	GCTNAGC	1 cut(s)	845
BpuEI	CTTGAG	2 cut(s)	405, 1207
BpuMI	CCSGG	3 cut(s)	257, 1084, 1827
BsaI	GGTCTC	2 cut(s)	1015, 1453
BsaJI	CCNNGG	2 cut(s)	1026, 1083
BsaWI	WCCGGW	1 cut(s)	1831
BsaXI	ACNNNNNCTCC	2 cut(s)	1582, 1612
Bsc4I	CCNNNNNNNGG	6 cut(s)	856, 1032, 1082, 1083, 1487, 1966
Bse118I	RCCGGY	2 cut(s)	301, 1831
Bse1I	ACTGG	7 cut(s)	308, 447, 466, 532, 1019, 1047, 1366
BseBI	CCWGG	2 cut(s)	1449, 1488
BseDI	CCNNGG	2 cut(s)	1026, 1083
BseLI	CCNNNNNNNGG	6 cut(s)	856, 1032, 1082, 1083, 1487, 1966
BseMII	CTCAG	4 cut(s)	836, 1104, 1220, 1644
BseNI	ACTGG	7 cut(s)	308, 447, 466, 532, 1019, 1047, 1366
BseRI	GAGGAG	5 cut(s)	33, 920, 1043, 1292, 1629
BseSI	GKGCMC	1 cut(s)	381
BseXI	GCAGC	6 cut(s)	751, 961, 1382, 1631, 1741, 2026
BseYI	CCCAGC	3 cut(s)	276, 354, 688
BsgI	GTGCAG	2 cut(s)	1748, 1925
Bsh1236I	CGCG	3 cut(s)	266, 647, 1368
Bsh1285I	CGRYCG	1 cut(s)	1836
BshFI	GGCC	3 cut(s)	263, 1365, 1676
BshTI	ACCGGT	1 cut(s)	1831
BsiEI	CGRYCG	1 cut(s)	1836
BsiHKAI	GWGCWC	2 cut(s)	702, 1119
BsiHKCI	CYCGRG	1 cut(s)	1025
BsiSI	CCGG	7 cut(s)	256, 302, 1083, 1454, 1826, 1832, 1967
BslFI	GGGAC	1 cut(s)	1842
BslI	CCNNNNNNNGG	6 cut(s)	856, 1032, 1082, 1083, 1487, 1966
BsmAI	GTCTC	5 cut(s)	155, 1015, 1053, 1181, 1453
BsmBI	CGTCTC	1 cut(s)	155
BsmFI	GGGAC	1 cut(s)	1842
BsmI	GAATGC	2 cut(s)	374, 1399
BsnI	GGCC	3 cut(s)	263, 1365, 1676
Bso31I	GGTCTC	2 cut(s)	1015, 1453
BsoBI	CYCGRG	1 cut(s)	1025
Bsp1286I	GDGCHC	3 cut(s)	381, 702, 1119
Bsp143I	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
Bsp1720I	GCTNAGC	1 cut(s)	845
BspACI	CCGC	9 cut(s)	264, 587, 647, 650, 673, 842, 1366, 1712, 1745
BspANI	GGCC	3 cut(s)	263, 1365, 1676
BspCNI	CTCAG	4 cut(s)	837, 1105, 1219, 1645
BspFNI	CGCG	3 cut(s)	266, 647, 1368
BspLI	GGNNCC	4 cut(s)	306, 1270, 1442, 1830
BspMAI	CTGCAG	1 cut(s)	1621
BspMI	ACCTGC	1 cut(s)	1532
BspPI	GGATC	3 cut(s)	194, 1033, 1133
BspQI	GCTCTTC	1 cut(s)	291
BspTNI	GGTCTC	2 cut(s)	1015, 1453
BsrBI	CCGCTC	1 cut(s)	673
BsrFI	RCCGGY	2 cut(s)	301, 1831
BsrI	ACTGG	7 cut(s)	308, 447, 466, 532, 1019, 1047, 1366
BssAI	RCCGGY	2 cut(s)	301, 1831
BssECI	CCNNGG	2 cut(s)	1026, 1083
BssMI	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
BssNAI	GTATAC	1 cut(s)	1628
Bst1107I	GTATAC	1 cut(s)	1628
Bst2UI	CCWGG	2 cut(s)	1449, 1488
Bst4CI	ACNGT	6 cut(s)	409, 1332, 1531, 1903, 1924, 2034
Bst6I	CTCTTC	6 cut(s)	291, 393, 849, 936, 1013, 1482
BstC8I	GCNNGC	3 cut(s)	303, 714, 1749
BstDEI	CTNAG	7 cut(s)	359, 845, 1113, 1176, 1206, 1653, 1758
BstENI	CCTNNNNNAGG	1 cut(s)	854
BstFNI	CGCG	3 cut(s)	266, 647, 1368
BstHHI	GCGC	1 cut(s)	1370
BstKTI	GATC	6 cut(s)	202, 286, 1041, 1141, 1221, 1899
BstMAI	GTCTC	5 cut(s)	155, 1015, 1053, 1181, 1453
BstMBI	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
BstMCI	CGRYCG	1 cut(s)	1836
BstMWI	GCNNNNNNNGC	9 cut(s)	679, 718, 1301, 1324, 1365, 1379, 1711, 1726, 1774
BstNI	CCWGG	2 cut(s)	1449, 1488
BstNSI	RCATGY	1 cut(s)	1751
BstPAI	GACNNNNGTC	1 cut(s)	167
BstSCI	CCNGG	5 cut(s)	255, 1082, 1447, 1486, 1825
BstSFI	CTRYAG	1 cut(s)	1617
BstSLI	GKGCMC	1 cut(s)	381
BstUI	CGCG	3 cut(s)	266, 647, 1368
BstV1I	GCAGC	6 cut(s)	751, 961, 1382, 1631, 1741, 2026
BstV2I	GAAGAC	2 cut(s)	282, 731
BstX2I	RGATCY	2 cut(s)	199, 1218
BstXI	CCANNNNNNTGG	1 cut(s)	1672
BstYI	RGATCY	2 cut(s)	199, 1218
BstZ17I	GTATAC	1 cut(s)	1628
BsuRI	GGCC	3 cut(s)	263, 1365, 1676
BtsI	GCAGTG	1 cut(s)	1561
BtsIMutI	CAGTG	6 cut(s)	174, 1054, 1359, 1561, 1611, 1908
BveI	ACCTGC	1 cut(s)	1532
Cac8I	GCNNGC	3 cut(s)	303, 714, 1749
CaiI	CAGNNNCTG	1 cut(s)	1922
CfoI	GCGC	1 cut(s)	1370
Cfr10I	RCCGGY	2 cut(s)	301, 1831
Cfr13I	GGNCC	3 cut(s)	149, 1451, 1829
CsiI	ACCWGGT	1 cut(s)	1486
Csp6I	GTAC	4 cut(s)	1094, 1537, 1545, 1634
CspAI	ACCGGT	1 cut(s)	1831
CspCI	CAANNNNNGTGG	2 cut(s)	1698, 1733
CviQI	GTAC	4 cut(s)	1094, 1537, 1545, 1634
DdeI	CTNAG	7 cut(s)	359, 845, 1113, 1176, 1206, 1653, 1758
DpnI	GATC	6 cut(s)	201, 285, 1040, 1140, 1220, 1898
DpnII	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
DraIII	CACNNNGTG	2 cut(s)	259, 1490
EaeI	YGGCCR	2 cut(s)	261, 1363
Eam1104I	CTCTTC	6 cut(s)	291, 393, 849, 936, 1013, 1482
EarI	CTCTTC	6 cut(s)	291, 393, 849, 936, 1013, 1482
EciI	GGCGGA	2 cut(s)	602, 665
Eco31I	GGTCTC	2 cut(s)	1015, 1453
Eco47I	GGWCC	3 cut(s)	149, 1451, 1829
Eco57I	CTGAAG	4 cut(s)	315, 656, 750, 1449
Eco88I	CYCGRG	1 cut(s)	1025
EcoNI	CCTNNNNNAGG	1 cut(s)	854
EcoRI	GAATTC	1 cut(s)	220
EcoRII	CCWGG	2 cut(s)	1447, 1486
EcoT22I	ATGCAT	2 cut(s)	244, 595
Esp3I	CGTCTC	1 cut(s)	155
FaqI	GGGAC	1 cut(s)	1842
FauNDI	CATATG	1 cut(s)	1337
FbaI	TGATCA	1 cut(s)	283
FblI	GTMKAC	2 cut(s)	1627, 1836
Fnu4HI	GCNGC	9 cut(s)	264, 648, 765, 950, 1366, 1371, 1620, 1730, 2040
Fsp4HI	GCNGC	9 cut(s)	264, 648, 765, 950, 1366, 1371, 1620, 1730, 2040
FspBI	CTAG	5 cut(s)	186, 668, 1191, 1512, 1623
GlaI	GCGC	1 cut(s)	1369
GluI	GCNGC	9 cut(s)	264, 648, 765, 950, 1366, 1371, 1620, 1730, 2040
GsaI	CCCAGC	3 cut(s)	280, 358, 692
GsuI	CTGGAG	2 cut(s)	81, 291
HaeIII	GGCC	3 cut(s)	263, 1365, 1676
HapII	CCGG	7 cut(s)	256, 302, 1083, 1454, 1826, 1832, 1967
HhaI	GCGC	1 cut(s)	1370
Hin6I	GCGC	1 cut(s)	1368
HinP1I	GCGC	1 cut(s)	1368
HincII	GTYRAC	2 cut(s)	1837, 1864
HindII	GTYRAC	2 cut(s)	1837, 1864
HindIII	AAGCTT	1 cut(s)	1775
HinfI	GANTC	3 cut(s)	344, 1180, 1784
HpaI	GTTAAC	1 cut(s)	1864
HpaII	CCGG	7 cut(s)	256, 302, 1083, 1454, 1826, 1832, 1967
HphI	GGTGA	1 cut(s)	1418
Hpy166II	GTNNAC	6 cut(s)	405, 1237, 1426, 1628, 1837, 1864
Hpy188I	TCNGA	7 cut(s)	295, 391, 480, 1114, 1654, 1918, 1935
Hpy188III	TCNNGA	8 cut(s)	58, 98, 197, 1184, 1208, 1224, 1256, 1799
Hpy8I	GTNNAC	6 cut(s)	405, 1237, 1426, 1628, 1837, 1864
HpyAV	CCTTC	6 cut(s)	160, 846, 956, 1454, 1473, 2098
HpyCH4III	ACNGT	6 cut(s)	409, 1332, 1531, 1903, 1924, 2034
HpyCH4IV	ACGT	1 cut(s)	135
HpyF10VI	GCNNNNNNNGC	9 cut(s)	679, 718, 1301, 1324, 1365, 1379, 1711, 1726, 1774
HpyF3I	CTNAG	7 cut(s)	359, 845, 1113, 1176, 1206, 1653, 1758
HpySE526I	ACGT	1 cut(s)	135
HspAI	GCGC	1 cut(s)	1368
KroI	GCCGGC	1 cut(s)	301
KroNI	GCCGGC	1 cut(s)	303
Ksp22I	TGATCA	1 cut(s)	283
KspAI	GTTAAC	1 cut(s)	1864
Kzo9I	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
LguI	GCTCTTC	1 cut(s)	291
LmnI	GCTCC	7 cut(s)	26, 46, 310, 420, 697, 870, 1087
Lsp1109I	GCAGC	6 cut(s)	751, 961, 1382, 1631, 1741, 2026
LweI	GCATC	6 cut(s)	580, 600, 691, 936, 1692, 1831
MabI	ACCWGGT	1 cut(s)	1486
MaeI	CTAG	5 cut(s)	186, 668, 1191, 1512, 1623
MaeII	ACGT	1 cut(s)	135
MaeIII	GTNAC	4 cut(s)	55, 753, 973, 1386
MalI	GATC	6 cut(s)	201, 285, 1040, 1140, 1220, 1898
MbiI	CCGCTC	1 cut(s)	673
MboI	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
MfeI	CAATTG	1 cut(s)	768
MflI	RGATCY	2 cut(s)	199, 1218
MhlI	GDGCHC	3 cut(s)	381, 702, 1119
Mph1103I	ATGCAT	2 cut(s)	244, 595
MroNI	GCCGGC	1 cut(s)	301
MseI	TTAA	5 cut(s)	321, 1299, 1503, 1584, 1863
MslI	CAYNNNNRTG	2 cut(s)	783, 1670
MspA1I	CMGCKG	1 cut(s)	844
MspI	CCGG	7 cut(s)	256, 302, 1083, 1454, 1826, 1832, 1967
MspR9I	CCNGG	5 cut(s)	257, 1084, 1449, 1488, 1827
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	2 cut(s)	374, 1399
MvaI	CCWGG	2 cut(s)	1449, 1488
MvnI	CGCG	3 cut(s)	266, 647, 1368
MwoI	GCNNNNNNNGC	9 cut(s)	679, 718, 1301, 1324, 1365, 1379, 1711, 1726, 1774
NaeI	GCCGGC	1 cut(s)	303
NciI	CCSGG	3 cut(s)	257, 1084, 1827
NdeI	CATATG	1 cut(s)	1337
NdeII	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
NgoMIV	GCCGGC	1 cut(s)	301
NlaIV	GGNNCC	4 cut(s)	306, 1270, 1442, 1830
NmuCI	GTSAC	2 cut(s)	55, 1386
NsiI	ATGCAT	2 cut(s)	244, 595
NspI	RCATGY	1 cut(s)	1751
PaeI	GCATGC	1 cut(s)	1751
PciSI	GCTCTTC	1 cut(s)	291
PctI	GAATGC	2 cut(s)	374, 1399
PdiI	GCCGGC	1 cut(s)	303
PfeI	GAWTC	3 cut(s)	344, 1180, 1784
PflMI	CCANNNNNTGG	1 cut(s)	1487
PfoI	TCCNGGA	1 cut(s)	1825
PinAI	ACCGGT	1 cut(s)	1831
PkrI	GCNGC	9 cut(s)	265, 649, 766, 951, 1367, 1372, 1621, 1731, 2041
PshAI	GACNNNNGTC	1 cut(s)	167
PsiI	TTATAA	3 cut(s)	863, 1661, 2122
Psp6I	CCWGG	2 cut(s)	1447, 1486
PspFI	CCCAGC	3 cut(s)	276, 354, 688
PspGI	CCWGG	2 cut(s)	1447, 1486
PspN4I	GGNNCC	4 cut(s)	306, 1270, 1442, 1830
PspPI	GGNCC	3 cut(s)	149, 1451, 1829
PstI	CTGCAG	1 cut(s)	1621
PstNI	CAGNNNCTG	1 cut(s)	1922
PsuI	RGATCY	2 cut(s)	199, 1218
RsaI	GTAC	4 cut(s)	1095, 1538, 1546, 1635
RsaNI	GTAC	4 cut(s)	1094, 1537, 1545, 1634
RseI	CAYNNNNRTG	2 cut(s)	783, 1670
SalI	GTCGAC	1 cut(s)	1835
SapI	GCTCTTC	1 cut(s)	291
SaqAI	TTAA	5 cut(s)	321, 1299, 1503, 1584, 1863
SatI	GCNGC	9 cut(s)	264, 648, 765, 950, 1366, 1371, 1620, 1730, 2040
Sau3AI	GATC	6 cut(s)	199, 283, 1038, 1138, 1218, 1896
Sau96I	GGNCC	3 cut(s)	149, 1451, 1829
ScrFI	CCNGG	5 cut(s)	257, 1084, 1449, 1488, 1827
SduI	GDGCHC	3 cut(s)	381, 702, 1119
SexAI	ACCWGGT	1 cut(s)	1486
SfaNI	GCATC	6 cut(s)	580, 600, 691, 936, 1692, 1831
SfcI	CTRYAG	1 cut(s)	1617
SinI	GGWCC	3 cut(s)	149, 1451, 1829
SmiMI	CAYNNNNRTG	2 cut(s)	783, 1670
SmlI	CTYRAG	2 cut(s)	420, 1222
SmoI	CTYRAG	2 cut(s)	420, 1222
SpeI	ACTAGT	1 cut(s)	1190
SphI	GCATGC	1 cut(s)	1751
SsiI	CCGC	9 cut(s)	264, 587, 647, 650, 673, 842, 1366, 1712, 1745
SspMI	CTAG	5 cut(s)	186, 668, 1191, 1512, 1623
StyD4I	CCNGG	5 cut(s)	255, 1082, 1447, 1486, 1825
TaaI	ACNGT	6 cut(s)	409, 1332, 1531, 1903, 1924, 2034
TaiI	ACGT	1 cut(s)	138
TaqI	TCGA	4 cut(s)	210, 795, 903, 1836
TaqII	GACCGA	1 cut(s)	166
TauI	GCSGC	3 cut(s)	266, 650, 1368
TfiI	GAWTC	3 cut(s)	344, 1180, 1784
Tru1I	TTAA	5 cut(s)	321, 1299, 1503, 1584, 1863
Tru9I	TTAA	5 cut(s)	321, 1299, 1503, 1584, 1863
TscAI	CASTG	6 cut(s)	181, 1054, 1366, 1561, 1611, 1908
TseFI	GTSAC	2 cut(s)	55, 1386
TseI	GCWGC	6 cut(s)	764, 949, 1370, 1619, 1729, 2039
Tsp45I	GTSAC	2 cut(s)	55, 1386
TspDTI	ATGAA	5 cut(s)	467, 951, 983, 1324, 2043
TspGWI	ACGGA	2 cut(s)	992, 1590
TspRI	CASTG	6 cut(s)	181, 1054, 1366, 1561, 1611, 1908
Van91I	CCANNNNNTGG	1 cut(s)	1487
VpaK11BI	GGWCC	3 cut(s)	149, 1451, 1829
XagI	CCTNNNNNAGG	1 cut(s)	854
XapI	RAATTY	5 cut(s)	155, 206, 220, 1808, 1944
XceI	RCATGY	1 cut(s)	1751
XmiI	GTMKAC	2 cut(s)	1627, 1836
XspI	CTAG	5 cut(s)	186, 668, 1191, 1512, 1623
Zsp2I	ATGCAT	2 cut(s)	244, 595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.