Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Forward (+)

55950235 .. 55954165

Gene Structure 3931 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG326100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGATGATGATGATAAGCTCCATCTCGCCCTTACCAGCTCCTCCTACTTCTGTCACGACACATACAAAGCCTATTGGCATCATCCCTCCACCTCCAGAAACAGCAAAAATCATCAACAAAACTGCCAAGCACGTTTCCAAGAATGGACCGAAATTTGAGACCAAGGTCATCACTGAAAAGACTAGACTAAATCCAGATCCAAAATTCGACTTTTTGAATTCCTCACATCCCTACCATGCATATTATCAGCACCGGGTGGCCGCGTTCCTTTCCCAGCCTGATCAGTCTTCTGAAGAGCCAGCTCCAGTTGTACATGTTAAAGCTGGTTCCCTCTCCCAGCTTAGACCTGAATGCAAAGTGCCCGAACCATCAGAACCCGAAGAGTTTACTGTTCAGCTCCCTCAAGGAATTAGTGGAGAAGAACTGGATGTTATGAAGCTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGTAGAGAGAGTAAAGACCCCCAGTTCGATTTTCTCAATCATAAACATAGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATGCATATTCAAAGGTGTTGATGACAGAAGAAGGGATGACAGAGAAACTGAAGAAGAACGCGGCGGACATGACCATCGTGCTAGAGCGGTGTGTGCATCGGCTGGGGTGGGAGCATTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCGCTGAGCCTTGAAGAGGTTATACGTAGGAGCAAAGTCGTTATGGAAGCAGATGATAATGTCGAGGAGCATAGGGATGTTGAAATGGATTTGGATGAAGAAGAGATGCAGCTTGTTGAAGAAGGCATGAAAGTAACGGAGGTGGAACAAGCACCAATGAGAATTGTGAAGAACTGGAAGAGACCCGAGGAGAGGATGATCCAATCCAGTGCCGAAAGAGACATGACGATTTCCCCCATTACCGGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGGCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGAGTTTGGAAAGCAGGACAAGCAGCAGGTCATATGGGATGGTCATGCTGGAAGCACTGGCCGCGCAGCAAATCAAGCCATGTCACAGAATGCCAATGGAGGTGATAAAACTGATGTTGTGAACAATGAGCCTCATTCCAGCAAATCACTTGACCTTTTCAACTTGGTTAAGCTCATTACGATCATGGAGTATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

495

Amino Acids

56.42

Weight (kDa)

5.13

Isoelectric Point (pI)

51.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	36 - 89	1.8e-17	Surp module
Surp	PF01805	142 - 193	3.6e-18	Surp module
PRP21_like_P	PF12230	212 - 411	1.6e-47	Pre-mRNA splicing factor PRP21 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1306
AccBSI	CCGCTC	1 cut(s)	658
AccII	CGCG	3 cut(s)	263, 632, 1353
AciI	CCGC	7 cut(s)	261, 569, 632, 635, 658, 827, 1351
AclWI	GGATC	3 cut(s)	191, 1018, 1118
AcoI	YGGCCR	2 cut(s)	258, 1348
AcsI	RAATTY	3 cut(s)	152, 203, 217
AcuI	CTGAAG	3 cut(s)	312, 641, 735
AdeI	CACNNNGTG	1 cut(s)	256
AfaI	GTAC	1 cut(s)	312
AfiI	CCNNNNNNNGG	4 cut(s)	841, 1017, 1067, 1068
AflIII	ACRYGT	1 cut(s)	313
AgsI	TTSAA	7 cut(s)	217, 550, 582, 839, 908, 944, 1450
AhlI	ACTAGT	1 cut(s)	1175
Alw21I	GWGCWC	1 cut(s)	1104
Alw26I	GTCTC	4 cut(s)	152, 1000, 1038, 1166
AlwI	GGATC	3 cut(s)	191, 1018, 1118
Ama87I	CYCGRG	1 cut(s)	1010
AoxI	GGCC	3 cut(s)	258, 1238, 1348
ApeKI	GCWGC	4 cut(s)	749, 934, 1312, 1355
ApoI	RAATTY	3 cut(s)	152, 203, 217
ArsI	GACNNNNNNTTYG	2 cut(s)	500, 532
AspLEI	GCGC	1 cut(s)	1355
AspS9I	GGNCC	1 cut(s)	146
AsuC2I	CCSGG	3 cut(s)	254, 1069, 1237
AsuHPI	GGTGA	1 cut(s)	1403
AvaI	CYCGRG	1 cut(s)	1010
AvaII	GGWCC	1 cut(s)	146
BaeGI	GKGCMC	1 cut(s)	363
BarI	GAAGNNNNNNTAC	2 cut(s)	831, 863
BbsI	GAAGAC	2 cut(s)	279, 716
Bbv12I	GWGCWC	1 cut(s)	1104
BbvI	GCAGC	4 cut(s)	736, 946, 1324, 1367
BccI	CCATC	4 cut(s)	29, 376, 653, 1322
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	3 cut(s)	254, 1069, 1237
BcoDI	GTCTC	4 cut(s)	152, 1000, 1038, 1166
BcuI	ACTAGT	1 cut(s)	1175
BfaI	CTAG	3 cut(s)	183, 653, 1176
BfuAI	ACCTGC	1 cut(s)	1306
BglII	AGATCT	1 cut(s)	1203
BisI	GCNGC	7 cut(s)	261, 633, 750, 935, 1313, 1351, 1356
BlpI	GCTNAGC	1 cut(s)	830
BlsI	GCNGC	7 cut(s)	262, 634, 751, 936, 1314, 1352, 1357
Bme1390I	CCNGG	3 cut(s)	254, 1069, 1237
Bme18I	GGWCC	1 cut(s)	146
BmeT110I	CYCGRG	1 cut(s)	1010
BmgT120I	GGNCC	1 cut(s)	146
BmiI	GGNNCC	2 cut(s)	328, 1255
BmrFI	CCNGG	3 cut(s)	254, 1069, 1237
BmrI	ACTGGG	2 cut(s)	442, 508
BmsI	GCATC	4 cut(s)	87, 562, 676, 921
BmuI	ACTGGG	2 cut(s)	442, 508
BoxI	GACNNNNGTC	1 cut(s)	164
BpiI	GAAGAC	2 cut(s)	279, 716
BpmI	CTGGAG	2 cut(s)	78, 288
Bpu10I	CCTNAGC	1 cut(s)	1191
Bpu1102I	GCTNAGC	1 cut(s)	830
BpuEI	CTTGAG	2 cut(s)	387, 1192
BpuMI	CCSGG	3 cut(s)	254, 1069, 1237
BsaAI	YACGTR	1 cut(s)	851
BsaI	GGTCTC	2 cut(s)	152, 1000
BsaJI	CCNNGG	3 cut(s)	162, 1011, 1068
Bsc4I	CCNNNNNNNGG	4 cut(s)	841, 1017, 1067, 1068
Bse1I	ACTGG	7 cut(s)	305, 429, 448, 514, 1004, 1032, 1351
BseDI	CCNNGG	3 cut(s)	162, 1011, 1068
BseLI	CCNNNNNNNGG	4 cut(s)	841, 1017, 1067, 1068
BseMII	CTCAG	4 cut(s)	821, 1089, 1205, 1281
BseNI	ACTGG	7 cut(s)	305, 429, 448, 514, 1004, 1032, 1351
BseRI	GAGGAG	5 cut(s)	30, 813, 905, 1028, 1277
BseSI	GKGCMC	1 cut(s)	363
BseXI	GCAGC	4 cut(s)	736, 946, 1324, 1367
BseYI	CCCAGC	3 cut(s)	273, 336, 673
Bsh1236I	CGCG	3 cut(s)	263, 632, 1353
BshFI	GGCC	3 cut(s)	260, 1240, 1350
BsiHKAI	GWGCWC	1 cut(s)	1104
BsiHKCI	CYCGRG	1 cut(s)	1010
BsiSI	CCGG	3 cut(s)	253, 1068, 1237
BslFI	GGGAC	1 cut(s)	1064
BslI	CCNNNNNNNGG	4 cut(s)	841, 1017, 1067, 1068
BsmAI	GTCTC	4 cut(s)	152, 1000, 1038, 1166
BsmFI	GGGAC	1 cut(s)	1064
BsmI	GAATGC	2 cut(s)	356, 1384
BsnI	GGCC	3 cut(s)	260, 1240, 1350
Bso31I	GGTCTC	2 cut(s)	152, 1000
BsoBI	CYCGRG	1 cut(s)	1010
Bsp1286I	GDGCHC	2 cut(s)	363, 1104
Bsp1407I	TGTACA	1 cut(s)	310
Bsp143I	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
Bsp1720I	GCTNAGC	1 cut(s)	830
BspACI	CCGC	7 cut(s)	261, 569, 632, 635, 658, 827, 1351
BspANI	GGCC	3 cut(s)	260, 1240, 1350
BspCNI	CTCAG	4 cut(s)	822, 1090, 1204, 1282
BspFNI	CGCG	3 cut(s)	263, 632, 1353
BspLI	GGNNCC	2 cut(s)	328, 1255
BspMI	ACCTGC	1 cut(s)	1306
BspPI	GGATC	3 cut(s)	191, 1018, 1118
BspQI	GCTCTTC	1 cut(s)	288
BspTNI	GGTCTC	2 cut(s)	152, 1000
BsrBI	CCGCTC	1 cut(s)	658
BsrGI	TGTACA	1 cut(s)	310
BsrI	ACTGG	7 cut(s)	305, 429, 448, 514, 1004, 1032, 1351
BssECI	CCNNGG	3 cut(s)	162, 1011, 1068
BssMI	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
BssT1I	CCWWGG	1 cut(s)	162
Bst4CI	ACNGT	1 cut(s)	391
Bst6I	CTCTTC	5 cut(s)	288, 375, 834, 921, 998
BstAUI	TGTACA	1 cut(s)	310
BstBAI	YACGTR	1 cut(s)	851
BstC8I	GCNNGC	2 cut(s)	300, 699
BstDEI	CTNAG	6 cut(s)	341, 830, 1098, 1161, 1191, 1290
BstENI	CCTNNNNNAGG	1 cut(s)	839
BstFNI	CGCG	3 cut(s)	263, 632, 1353
BstHHI	GCGC	1 cut(s)	1355
BstKTI	GATC	6 cut(s)	199, 283, 1026, 1126, 1206, 1473
BstMAI	GTCTC	4 cut(s)	152, 1000, 1038, 1166
BstMBI	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
BstMWI	GCNNNNNNNGC	6 cut(s)	664, 703, 1286, 1309, 1350, 1364
BstNSI	RCATGY	1 cut(s)	317
BstPAI	GACNNNNGTC	1 cut(s)	164
BstSCI	CCNGG	3 cut(s)	252, 1067, 1235
BstSLI	GKGCMC	1 cut(s)	363
BstSNI	TACGTA	1 cut(s)	851
BstUI	CGCG	3 cut(s)	263, 632, 1353
BstV1I	GCAGC	4 cut(s)	736, 946, 1324, 1367
BstV2I	GAAGAC	2 cut(s)	279, 716
BstX2I	RGATCY	2 cut(s)	196, 1203
BstYI	RGATCY	2 cut(s)	196, 1203
BsuRI	GGCC	3 cut(s)	260, 1240, 1350
BtsIMutI	CAGTG	3 cut(s)	171, 1039, 1344
BveI	ACCTGC	1 cut(s)	1306
Cac8I	GCNNGC	2 cut(s)	300, 699
CfoI	GCGC	1 cut(s)	1355
Cfr13I	GGNCC	1 cut(s)	146
Csp6I	GTAC	1 cut(s)	311
CviAII	CATG	9 cut(s)	236, 314, 640, 952, 1048, 1105, 1334, 1369, 1474
CviQI	GTAC	1 cut(s)	311
DdeI	CTNAG	6 cut(s)	341, 830, 1098, 1161, 1191, 1290
DpnI	GATC	6 cut(s)	198, 282, 1025, 1125, 1205, 1472
DpnII	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
DraIII	CACNNNGTG	1 cut(s)	256
EaeI	YGGCCR	2 cut(s)	258, 1348
Eam1104I	CTCTTC	5 cut(s)	288, 375, 834, 921, 998
EarI	CTCTTC	5 cut(s)	288, 375, 834, 921, 998
EciI	GGCGGA	2 cut(s)	584, 650
Eco105I	TACGTA	1 cut(s)	851
Eco130I	CCWWGG	1 cut(s)	162
Eco31I	GGTCTC	2 cut(s)	152, 1000
Eco47I	GGWCC	1 cut(s)	146
Eco57I	CTGAAG	3 cut(s)	312, 641, 735
Eco88I	CYCGRG	1 cut(s)	1010
EcoNI	CCTNNNNNAGG	1 cut(s)	839
EcoRI	GAATTC	1 cut(s)	217
EcoT14I	CCWWGG	1 cut(s)	162
EcoT22I	ATGCAT	2 cut(s)	241, 577
ErhI	CCWWGG	1 cut(s)	162
FaeI	CATG	9 cut(s)	239, 317, 643, 955, 1051, 1108, 1337, 1372, 1477
FaqI	GGGAC	1 cut(s)	1064
FatI	CATG	9 cut(s)	235, 313, 639, 951, 1047, 1104, 1333, 1368, 1473
FauNDI	CATATG	1 cut(s)	1322
FbaI	TGATCA	1 cut(s)	280
Fnu4HI	GCNGC	7 cut(s)	261, 633, 750, 935, 1313, 1351, 1356
Fsp4HI	GCNGC	7 cut(s)	261, 633, 750, 935, 1313, 1351, 1356
FspBI	CTAG	3 cut(s)	183, 653, 1176
GlaI	GCGC	1 cut(s)	1354
GluI	GCNGC	7 cut(s)	261, 633, 750, 935, 1313, 1351, 1356
GsaI	CCCAGC	3 cut(s)	277, 340, 677
GsuI	CTGGAG	2 cut(s)	78, 288
HaeIII	GGCC	3 cut(s)	260, 1240, 1350
HapII	CCGG	3 cut(s)	253, 1068, 1237
HhaI	GCGC	1 cut(s)	1355
Hin1II	CATG	9 cut(s)	239, 317, 643, 955, 1051, 1108, 1337, 1372, 1477
Hin6I	GCGC	1 cut(s)	1353
HinP1I	GCGC	1 cut(s)	1353
HinfI	GANTC	1 cut(s)	1165
HpaII	CCGG	3 cut(s)	253, 1068, 1237
HphI	GGTGA	1 cut(s)	1403
Hpy166II	GTNNAC	3 cut(s)	387, 1222, 1411
Hpy188I	TCNGA	4 cut(s)	292, 373, 462, 1099
Hpy188III	TCNNGA	6 cut(s)	55, 95, 194, 1169, 1193, 1209
Hpy8I	GTNNAC	3 cut(s)	387, 1222, 1411
HpyAV	CCTTC	2 cut(s)	596, 941
HpyCH4III	ACNGT	1 cut(s)	391
HpyCH4IV	ACGT	2 cut(s)	132, 850
HpyCH4V	TGCA	6 cut(s)	239, 354, 575, 667, 752, 934
HpyF10VI	GCNNNNNNNGC	6 cut(s)	664, 703, 1286, 1309, 1350, 1364
HpyF3I	CTNAG	6 cut(s)	341, 830, 1098, 1161, 1191, 1290
HpySE526I	ACGT	2 cut(s)	132, 850
Hsp92II	CATG	9 cut(s)	239, 317, 643, 955, 1051, 1108, 1337, 1372, 1477
HspAI	GCGC	1 cut(s)	1353
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
LguI	GCTCTTC	1 cut(s)	288
LmnI	GCTCC	8 cut(s)	23, 43, 307, 402, 682, 855, 892, 1072
Lsp1109I	GCAGC	4 cut(s)	736, 946, 1324, 1367
LweI	GCATC	4 cut(s)	87, 562, 676, 921
MaeI	CTAG	3 cut(s)	183, 653, 1176
MaeII	ACGT	2 cut(s)	132, 850
MaeIII	GTNAC	4 cut(s)	52, 738, 958, 1371
MalI	GATC	6 cut(s)	198, 282, 1025, 1125, 1205, 1472
MbiI	CCGCTC	1 cut(s)	658
MboI	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
MfeI	CAATTG	1 cut(s)	753
MflI	RGATCY	2 cut(s)	196, 1203
MhlI	GDGCHC	2 cut(s)	363, 1104
MluCI	AATT	8 cut(s)	152, 203, 217, 408, 485, 753, 987, 1483
Mph1103I	ATGCAT	2 cut(s)	241, 577
MseI	TTAA	3 cut(s)	318, 1284, 1458
MslI	CAYNNNNRTG	2 cut(s)	768, 900
MspA1I	CMGCKG	1 cut(s)	829
MspI	CCGG	3 cut(s)	253, 1068, 1237
MspR9I	CCNGG	3 cut(s)	254, 1069, 1237
MunI	CAATTG	1 cut(s)	753
Mva1269I	GAATGC	2 cut(s)	356, 1384
MvnI	CGCG	3 cut(s)	263, 632, 1353
MwoI	GCNNNNNNNGC	6 cut(s)	664, 703, 1286, 1309, 1350, 1364
NciI	CCSGG	3 cut(s)	254, 1069, 1237
NdeI	CATATG	1 cut(s)	1322
NdeII	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
NlaIII	CATG	9 cut(s)	239, 317, 643, 955, 1051, 1108, 1337, 1372, 1477
NlaIV	GGNNCC	2 cut(s)	328, 1255
NmuCI	GTSAC	2 cut(s)	52, 1371
NsiI	ATGCAT	2 cut(s)	241, 577
NspI	RCATGY	1 cut(s)	317
PciI	ACATGT	1 cut(s)	313
PciSI	GCTCTTC	1 cut(s)	288
PctI	GAATGC	2 cut(s)	356, 1384
PfeI	GAWTC	1 cut(s)	1165
PkrI	GCNGC	7 cut(s)	262, 634, 751, 936, 1314, 1352, 1357
Ppu21I	YACGTR	1 cut(s)	851
PscI	ACATGT	1 cut(s)	313
PshAI	GACNNNNGTC	1 cut(s)	164
PspFI	CCCAGC	3 cut(s)	273, 336, 673
PspN4I	GGNNCC	2 cut(s)	328, 1255
PspPI	GGNCC	1 cut(s)	146
PsuI	RGATCY	2 cut(s)	196, 1203
RsaI	GTAC	1 cut(s)	312
RsaNI	GTAC	1 cut(s)	311
RseI	CAYNNNNRTG	2 cut(s)	768, 900
SapI	GCTCTTC	1 cut(s)	288
SaqAI	TTAA	3 cut(s)	318, 1284, 1458
SatI	GCNGC	7 cut(s)	261, 633, 750, 935, 1313, 1351, 1356
Sau3AI	GATC	6 cut(s)	196, 280, 1023, 1123, 1203, 1470
Sau96I	GGNCC	1 cut(s)	146
ScrFI	CCNGG	3 cut(s)	254, 1069, 1237
SduI	GDGCHC	2 cut(s)	363, 1104
SfaNI	GCATC	4 cut(s)	87, 562, 676, 921
SinI	GGWCC	1 cut(s)	146
SmiMI	CAYNNNNRTG	2 cut(s)	768, 900
SmlI	CTYRAG	2 cut(s)	402, 1207
SmoI	CTYRAG	2 cut(s)	402, 1207
SnaBI	TACGTA	1 cut(s)	851
SpeI	ACTAGT	1 cut(s)	1175
Sse9I	AATT	8 cut(s)	152, 203, 217, 408, 485, 753, 987, 1483
SsiI	CCGC	7 cut(s)	261, 569, 632, 635, 658, 827, 1351
SspMI	CTAG	3 cut(s)	183, 653, 1176
StyD4I	CCNGG	3 cut(s)	252, 1067, 1235
StyI	CCWWGG	1 cut(s)	162
TaaI	ACNGT	1 cut(s)	391
TaiI	ACGT	2 cut(s)	135, 853
TaqI	TCGA	4 cut(s)	207, 519, 780, 888
TaqII	GACCGA	1 cut(s)	163
TasI	AATT	8 cut(s)	152, 203, 217, 408, 485, 753, 987, 1483
TatI	WGTACW	1 cut(s)	310
TauI	GCSGC	3 cut(s)	263, 635, 1353
TfiI	GAWTC	1 cut(s)	1165
Tru1I	TTAA	3 cut(s)	318, 1284, 1458
Tru9I	TTAA	3 cut(s)	318, 1284, 1458
TscAI	CASTG	3 cut(s)	178, 1039, 1351
TseFI	GTSAC	2 cut(s)	52, 1371
TseI	GCWGC	4 cut(s)	749, 934, 1312, 1355
Tsp45I	GTSAC	2 cut(s)	52, 1371
TspDTI	ATGAA	3 cut(s)	449, 936, 968
TspGWI	ACGGA	1 cut(s)	977
TspRI	CASTG	3 cut(s)	178, 1039, 1351
VpaK11BI	GGWCC	1 cut(s)	146
XagI	CCTNNNNNAGG	1 cut(s)	839
XapI	RAATTY	3 cut(s)	152, 203, 217
XceI	RCATGY	1 cut(s)	317
XspI	CTAG	3 cut(s)	183, 653, 1176
Zsp2I	ATGCAT	2 cut(s)	241, 577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.