Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Reverse (-)

43393314 .. 43404089

Gene Structure 10776 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0316300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGCTGGGAGTAGAAGAGAGTCCTGCAATCGGGATTGATCTGGGGACAACCTACTCGTGCGTGGCCGTGTGGCAGTATGATCATGTAGAAATTATAGTGAATGATCAGGGCAACAGGACCACTCCGTCTCTTGTTGCTTTCACTGATACTGAGCGCTTCATTGGTGATGCGGCATTTAACCAGATCATCAGGAACCCCACCAACTCCATCTTTGATGCGAAGAGGTTAATTGGTAGGAGATTCAGTGATGAAACTGTTCAAAATGATTTGAAACTCTGGCCATTCAAGGTCATTGAAGGTCCAGGTGACACACCGATGATTGTGGTTACCCACAAGGGTCAAGAGAAAAAGTTAAATGCAGAAGAAGTCTCATCCATGGTTCTTGGAAAGATGAAGGAGATTGCTGAGGCTTATCTCGGGTCAACTGTGAAGAATGCAGTTGTCACTGTCCCCGCGTACTTTAATGATGCACAACGTCAAGCTACAAAGAATGCTGGTGCCACTGCTGGGCTTAATGTCATGCATATCATCAATGAACCAACTGCCACAGCCATTGCTTATGGACTTAACAAGAAGGCAGGAAGGCATAGCAAAAGAAACGTGATGGTATTTGACTTGGGCGGTGGAACTTTAGATGTGTCTCTACTTACCATAGGGGATGGTGTGTTTGAAGTGAAGGCCACAGCTGGAGACACTCATCTTGGAGGCGAAGACTTTGATAACAGAATGGTGAATTTCTGCATTGAAAAGTTCAAGAGCAAGCATGATTTGGACGTGAGTGGAAACTCCAAAGCTCTTAGAAGATTAAGAAATGCATGTGAGAAGGCAAAGAGGAGGCTCTCATTTGCGTTTACAACTGACATTGAAATCGACTCTTTGGAGCAGGCTCCCAAGTTCGAACAATTGAACATGGATTACTTCAGTAAGTGTATGGAGCCGGTGGAGAAATGTTTAAGGGATGCGAACATGGACGTAAGCAGTGTCCATGATGTTGTTCTTTCGGGTGGCTCTTCTAGAATTCCCAAGGTGCAGGAACTATTGCAGAAACTGTTCAAGGGGAAGGAATTATGCAAGGGAATTAATCCGGATGAGGCAGTGGCATATGGTGCGGCTGTTCAAGCTGCTTTCTTGAGTGGGAAGCTTCAGAACTTCAGTATTTTCTTAGATGTCACACCTTTGTCACTTGGGGTGGTAGTCGGCCCAGATCAGACCATCGAATTTCTGGTTCCAAGAAACACTAGAATTCCTGTCATCAAAAATAAATACTTCACTACCATGTACGACAACCAACAGGCTGTCAGATTTGCCATATACGAGGGTGAGAGTAGAATTGCCGCAAATAATAACTATTTGGGAGAATTTACAATGGATGACATTCCTCCTGCCCCTAAGGGAGTCCCTCTACTCAATACTTGGTTCTTTATTGATGCCAATGGTATCTTAACTGTCTCTGCTCAGGATGTCTCTACGGGACAGATGAAAGGAATCAGAATCAACAGTGATAGGAGAAGTTGCCAGATGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

508

Amino Acids

55.98

Weight (kDa)

6.24

Isoelectric Point (pI)

39.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	9 - 502	2.2e-193	Hsp70 protein
MreB_Mbl	PF06723	142 - 371	6.3e-13	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	124
AccB1I	GGYRCC	1 cut(s)	497
AccII	CGCG	1 cut(s)	455
AccIII	TCCGGA	1 cut(s)	1084
AciI	CCGC	5 cut(s)	170, 453, 621, 1109, 1335
AcoI	YGGCCR	2 cut(s)	63, 278
AcsI	RAATTY	5 cut(s)	733, 1017, 1217, 1242, 1358
AcuI	CTGAAG	3 cut(s)	904, 1127, 1135
AfaI	GTAC	2 cut(s)	458, 1280
AfeI	AGCGCT	1 cut(s)	155
AfiI	CCNNNNNNNGG	2 cut(s)	29, 507
AjiI	CACGTC	1 cut(s)	775
AjnI	CCWGG	1 cut(s)	301
AluBI	AGCT	5 cut(s)	482, 686, 794, 1121, 1141
AluI	AGCT	5 cut(s)	482, 686, 794, 1121, 1141
Alw26I	GTCTC	6 cut(s)	132, 373, 645, 684, 1453, 1468
AlwNI	CAGNNNCTG	1 cut(s)	1048
Ama87I	CYCGRG	1 cut(s)	416
Aor13HI	TCCGGA	1 cut(s)	1084
Aor51HI	AGCGCT	1 cut(s)	155
AoxI	GGCC	4 cut(s)	63, 278, 678, 1198
ApeKI	GCWGC	1 cut(s)	1121
ApoI	RAATTY	5 cut(s)	733, 1017, 1217, 1242, 1358
AseI	ATTAAT	1 cut(s)	1080
Asp700I	GAANNNNTTC	2 cut(s)	255, 1049
AspLEI	GCGC	1 cut(s)	156
AspS9I	GGNCC	3 cut(s)	117, 299, 1199
AsuHPI	GGTGA	4 cut(s)	176, 317, 742, 1331
AsuII	TTCGAA	1 cut(s)	897
AvaI	CYCGRG	1 cut(s)	416
AvaII	GGWCC	2 cut(s)	117, 299
AxyI	CCTNAGG	1 cut(s)	1389
BalI	TGGCCA	1 cut(s)	280
BanI	GGYRCC	1 cut(s)	497
BauI	CACGAG	1 cut(s)	55
BbsI	GAAGAC	1 cut(s)	717
BbvCI	CCTCAGC	1 cut(s)	405
BbvI	GCAGC	1 cut(s)	1108
BccI	CCATC	4 cut(s)	215, 598, 653, 1220
BceAI	ACGGC	1 cut(s)	50
BciT130I	CCWGG	1 cut(s)	303
BclI	TGATCA	2 cut(s)	79, 103
BcoDI	GTCTC	6 cut(s)	132, 373, 645, 684, 1453, 1468
BfaI	CTAG	2 cut(s)	1014, 1239
BfoI	RGCGCY	1 cut(s)	157
BisI	GCNGC	4 cut(s)	171, 1110, 1122, 1335
BlsI	GCNGC	4 cut(s)	172, 1111, 1123, 1336
Bme1390I	CCNGG	1 cut(s)	303
Bme18I	GGWCC	2 cut(s)	117, 299
BmeT110I	CYCGRG	1 cut(s)	416
BmgBI	CACGTC	1 cut(s)	775
BmgT120I	GGNCC	3 cut(s)	117, 299, 1199
BmiI	GGNNCC	5 cut(s)	194, 499, 888, 936, 1227
BmrFI	CCNGG	1 cut(s)	303
BmsI	GCATC	5 cut(s)	157, 205, 457, 949, 1417
BpiI	GAAGAC	1 cut(s)	717
BpmI	CTGGAG	1 cut(s)	708
Bpu10I	CCTNAGC	2 cut(s)	405, 1455
Bpu14I	TTCGAA	1 cut(s)	897
BpuEI	CTTGAG	1 cut(s)	1150
BsaJI	CCNNGG	2 cut(s)	375, 1023
BsaWI	WCCGGW	1 cut(s)	1084
BsaXI	ACNNNNNCTCC	2 cut(s)	229, 259
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 507
Bse118I	RCCGGY	1 cut(s)	937
Bse21I	CCTNAGG	1 cut(s)	1389
Bse3DI	GCAATG	1 cut(s)	552
BseAI	TCCGGA	1 cut(s)	1084
BseBI	CCWGG	1 cut(s)	303
BseDI	CCNNGG	2 cut(s)	375, 1023
BseGI	GGATG	6 cut(s)	371, 664, 964, 1093, 1375, 1465
BseLI	CCNNNNNNNGG	2 cut(s)	29, 507
BseMI	GCAATG	1 cut(s)	552
BseMII	CTCAG	3 cut(s)	141, 396, 1469
BseRI	GAGGAG	1 cut(s)	847
BseXI	GCAGC	1 cut(s)	1108
BseYI	CCCAGC	2 cut(s)	4, 506
BsgI	GTGCAG	1 cut(s)	1049
Bsh1236I	CGCG	1 cut(s)	455
BshFI	GGCC	4 cut(s)	65, 280, 680, 1200
BshNI	GGYRCC	1 cut(s)	497
BsiHKCI	CYCGRG	1 cut(s)	416
BsiSI	CCGG	2 cut(s)	938, 1085
BslFI	GGGAC	4 cut(s)	58, 434, 1382, 1485
BslI	CCNNNNNNNGG	2 cut(s)	29, 507
BsmAI	GTCTC	6 cut(s)	132, 373, 645, 684, 1453, 1468
BsmBI	CGTCTC	1 cut(s)	132
BsmFI	GGGAC	4 cut(s)	58, 434, 1382, 1485
BsmI	GAATGC	2 cut(s)	439, 496
BsnI	GGCC	4 cut(s)	65, 280, 680, 1200
BsoBI	CYCGRG	1 cut(s)	416
Bsp119I	TTCGAA	1 cut(s)	897
Bsp13I	TCCGGA	1 cut(s)	1084
Bsp143I	GATC	5 cut(s)	37, 79, 103, 183, 1204
Bsp19I	CCATGG	1 cut(s)	375
BspACI	CCGC	5 cut(s)	170, 453, 621, 1109, 1335
BspANI	GGCC	4 cut(s)	65, 280, 680, 1200
BspCNI	CTCAG	3 cut(s)	142, 397, 1468
BspEI	TCCGGA	1 cut(s)	1084
BspFNI	CGCG	1 cut(s)	455
BspLI	GGNNCC	5 cut(s)	194, 499, 888, 936, 1227
BspQI	GCTCTTC	1 cut(s)	1015
BspT104I	TTCGAA	1 cut(s)	897
BspT107I	GGYRCC	1 cut(s)	497
BsrDI	GCAATG	1 cut(s)	552
BsrFI	RCCGGY	1 cut(s)	937
BssAI	RCCGGY	1 cut(s)	937
BssECI	CCNNGG	2 cut(s)	375, 1023
BssMI	GATC	5 cut(s)	37, 79, 103, 183, 1204
BssSI	CACGAG	1 cut(s)	55
BssT1I	CCWWGG	2 cut(s)	375, 1023
Bst2BI	CACGAG	1 cut(s)	55
Bst2UI	CCWGG	1 cut(s)	303
Bst4CI	ACNGT	6 cut(s)	256, 427, 448, 1050, 1447, 1499
Bst6I	CTCTTC	3 cut(s)	9, 215, 1015
BstAPI	GCANNNNNTGC	1 cut(s)	1106
BstBI	TTCGAA	1 cut(s)	897
BstC8I	GCNNGC	2 cut(s)	761, 885
BstDEI	CTNAG	6 cut(s)	150, 405, 797, 1162, 1389, 1455
BstDSI	CCRYGG	1 cut(s)	375
BstEII	GGTNACC	1 cut(s)	325
BstF5I	GGATG	6 cut(s)	371, 664, 964, 1093, 1375, 1465
BstFNI	CGCG	1 cut(s)	455
BstH2I	RGCGCY	1 cut(s)	157
BstHHI	GCGC	1 cut(s)	156
BstKTI	GATC	5 cut(s)	40, 82, 106, 186, 1207
BstMAI	GTCTC	6 cut(s)	132, 373, 645, 684, 1453, 1468
BstMBI	GATC	5 cut(s)	37, 79, 103, 183, 1204
BstMWI	GCNNNNNNNGC	2 cut(s)	1106, 1118
BstNI	CCWGG	1 cut(s)	303
BstNSI	RCATGY	1 cut(s)	819
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	1 cut(s)	301
BstUI	CGCG	1 cut(s)	455
BstV1I	GCAGC	1 cut(s)	1108
BstV2I	GAAGAC	1 cut(s)	717
Bsu36I	CCTNAGG	1 cut(s)	1389
BsuRI	GGCC	4 cut(s)	65, 280, 680, 1200
BtgI	CCRYGG	1 cut(s)	375
BtrI	CACGTC	1 cut(s)	775
BtsCI	GGATG	6 cut(s)	371, 664, 964, 1093, 1375, 1465
BtsI	GCAGTG	3 cut(s)	501, 985, 1101
BtsIMutI	CAGTG	7 cut(s)	141, 250, 444, 501, 985, 1101, 1504
Cac8I	GCNNGC	2 cut(s)	761, 885
CaiI	CAGNNNCTG	1 cut(s)	1048
CfoI	GCGC	1 cut(s)	156
Cfr10I	RCCGGY	1 cut(s)	937
Cfr13I	GGNCC	3 cut(s)	117, 299, 1199
Csp6I	GTAC	2 cut(s)	457, 1279
CspCI	CAANNNNNGTGG	2 cut(s)	535, 570
CviAII	CATG	9 cut(s)	83, 376, 520, 764, 816, 910, 967, 986, 1276
CviQI	GTAC	2 cut(s)	457, 1279
DdeI	CTNAG	6 cut(s)	150, 405, 797, 1162, 1389, 1455
DpnI	GATC	5 cut(s)	39, 81, 105, 185, 1206
DpnII	GATC	5 cut(s)	37, 79, 103, 183, 1204
DrdI	GACNNNNNNGTC	1 cut(s)	124
DseDI	GACNNNNNNGTC	1 cut(s)	124
EaeI	YGGCCR	2 cut(s)	63, 278
Eam1104I	CTCTTC	3 cut(s)	9, 215, 1015
EarI	CTCTTC	3 cut(s)	9, 215, 1015
Eco130I	CCWWGG	2 cut(s)	375, 1023
Eco47I	GGWCC	2 cut(s)	117, 299
Eco47III	AGCGCT	1 cut(s)	155
Eco57I	CTGAAG	3 cut(s)	904, 1127, 1135
Eco81I	CCTNAGG	1 cut(s)	1389
Eco88I	CYCGRG	1 cut(s)	416
Eco91I	GGTNACC	1 cut(s)	325
EcoO65I	GGTNACC	1 cut(s)	325
EcoRI	GAATTC	2 cut(s)	1017, 1242
EcoRII	CCWGG	1 cut(s)	301
EcoT14I	CCWWGG	2 cut(s)	375, 1023
EcoT22I	ATGCAT	2 cut(s)	525, 817
ErhI	CCWWGG	2 cut(s)	375, 1023
Esp3I	CGTCTC	1 cut(s)	132
FaeI	CATG	9 cut(s)	86, 379, 523, 767, 819, 913, 970, 989, 1279
FaqI	GGGAC	4 cut(s)	58, 434, 1382, 1485
FatI	CATG	9 cut(s)	82, 375, 519, 763, 815, 909, 966, 985, 1275
FauI	CCCGC	1 cut(s)	460
FauNDI	CATATG	1 cut(s)	1102
FbaI	TGATCA	2 cut(s)	79, 103
Fnu4HI	GCNGC	4 cut(s)	171, 1110, 1122, 1335
FokI	GGATG	6 cut(s)	358, 671, 971, 1100, 1382, 1472
Fsp4HI	GCNGC	4 cut(s)	171, 1110, 1122, 1335
FspBI	CTAG	2 cut(s)	1014, 1239
GlaI	GCGC	1 cut(s)	155
GluI	GCNGC	4 cut(s)	171, 1110, 1122, 1335
GsaI	CCCAGC	2 cut(s)	8, 510
GsuI	CTGGAG	1 cut(s)	708
HaeII	RGCGCY	1 cut(s)	157
HaeIII	GGCC	4 cut(s)	65, 280, 680, 1200
HapII	CCGG	2 cut(s)	938, 1085
HhaI	GCGC	1 cut(s)	156
Hin1II	CATG	9 cut(s)	86, 379, 523, 767, 819, 913, 970, 989, 1279
Hin6I	GCGC	1 cut(s)	154
HinP1I	GCGC	1 cut(s)	154
HincII	GTYRAC	1 cut(s)	423
HindII	GTYRAC	1 cut(s)	423
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	6 cut(s)	19, 240, 872, 1395, 1485, 1491
HpaII	CCGG	2 cut(s)	938, 1085
HphI	GGTGA	4 cut(s)	176, 317, 742, 1331
Hpy166II	GTNNAC	2 cut(s)	423, 852
Hpy188I	TCNGA	4 cut(s)	1146, 1209, 1301, 1490
Hpy188III	TCNNGA	8 cut(s)	31, 190, 341, 754, 1014, 1085, 1129, 1457
Hpy8I	GTNNAC	2 cut(s)	423, 852
HpyAV	CCTTC	7 cut(s)	290, 388, 568, 576, 670, 817, 1054
HpyCH4III	ACNGT	6 cut(s)	256, 427, 448, 1050, 1447, 1499
HpyCH4IV	ACGT	4 cut(s)	475, 600, 774, 972
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1106, 1118
HpyF3I	CTNAG	6 cut(s)	150, 405, 797, 1162, 1389, 1455
HpySE526I	ACGT	4 cut(s)	475, 600, 774, 972
Hsp92II	CATG	9 cut(s)	86, 379, 523, 767, 819, 913, 970, 989, 1279
HspAI	GCGC	1 cut(s)	154
Kpn2I	TCCGGA	1 cut(s)	1084
Ksp22I	TGATCA	2 cut(s)	79, 103
Kzo9I	GATC	5 cut(s)	37, 79, 103, 183, 1204
LguI	GCTCTTC	1 cut(s)	1015
LmnI	GCTCC	3 cut(s)	880, 892, 934
Lsp1109I	GCAGC	1 cut(s)	1108
LweI	GCATC	5 cut(s)	157, 205, 457, 949, 1417
MaeI	CTAG	2 cut(s)	1014, 1239
MaeII	ACGT	4 cut(s)	475, 600, 774, 972
MaeIII	GTNAC	5 cut(s)	305, 325, 442, 1168, 1179
MalI	GATC	5 cut(s)	39, 81, 105, 185, 1206
MboI	GATC	5 cut(s)	37, 79, 103, 183, 1204
MboII	GAAGA	7 cut(s)	26, 232, 374, 442, 722, 813, 1002
MfeI	CAATTG	1 cut(s)	902
MlsI	TGGCCA	1 cut(s)	280
MluNI	TGGCCA	1 cut(s)	280
MlyI	GAGTC	3 cut(s)	28, 866, 1404
MnlI	CCTC	9 cut(s)	216, 400, 698, 825, 828, 1084, 1309, 1389, 1410
Mox20I	TGGCCA	1 cut(s)	280
Mph1103I	ATGCAT	2 cut(s)	525, 817
MroI	TCCGGA	1 cut(s)	1084
MroXI	GAANNNNTTC	2 cut(s)	255, 1049
MscI	TGGCCA	1 cut(s)	280
MslI	CAYNNNNRTG	2 cut(s)	314, 1274
Msp20I	TGGCCA	1 cut(s)	280
MspA1I	CMGCKG	1 cut(s)	686
MspI	CCGG	2 cut(s)	938, 1085
MspR9I	CCNGG	1 cut(s)	303
MunI	CAATTG	1 cut(s)	902
Mva1269I	GAATGC	2 cut(s)	439, 496
MvaI	CCWGG	1 cut(s)	303
MvnI	CGCG	1 cut(s)	455
MwoI	GCNNNNNNNGC	2 cut(s)	1106, 1118
NcoI	CCATGG	1 cut(s)	375
NdeI	CATATG	1 cut(s)	1102
NdeII	GATC	5 cut(s)	37, 79, 103, 183, 1204
NlaIII	CATG	9 cut(s)	86, 379, 523, 767, 819, 913, 970, 989, 1279
NlaIV	GGNNCC	5 cut(s)	194, 499, 888, 936, 1227
NmuCI	GTSAC	4 cut(s)	305, 442, 1168, 1179
NsiI	ATGCAT	2 cut(s)	525, 817
NspI	RCATGY	1 cut(s)	819
NspV	TTCGAA	1 cut(s)	897
PciSI	GCTCTTC	1 cut(s)	1015
PctI	GAATGC	2 cut(s)	439, 496
PdmI	GAANNNNTTC	2 cut(s)	255, 1049
PfeI	GAWTC	3 cut(s)	240, 1485, 1491
PkrI	GCNGC	4 cut(s)	172, 1111, 1123, 1336
PleI	GAGTC	3 cut(s)	27, 866, 1403
PpsI	GAGTC	3 cut(s)	27, 866, 1403
PshBI	ATTAAT	1 cut(s)	1080
Psp6I	CCWGG	1 cut(s)	301
PspEI	GGTNACC	1 cut(s)	325
PspFI	CCCAGC	2 cut(s)	4, 506
PspGI	CCWGG	1 cut(s)	301
PspN4I	GGNNCC	5 cut(s)	194, 499, 888, 936, 1227
PspPI	GGNCC	3 cut(s)	117, 299, 1199
PsrI	GAACNNNNNNTAC	2 cut(s)	899, 931
PstNI	CAGNNNCTG	1 cut(s)	1048
PvuII	CAGCTG	1 cut(s)	686
RsaI	GTAC	2 cut(s)	458, 1280
RsaNI	GTAC	2 cut(s)	457, 1279
RseI	CAYNNNNRTG	2 cut(s)	314, 1274
SapI	GCTCTTC	1 cut(s)	1015
SatI	GCNGC	4 cut(s)	171, 1110, 1122, 1335
Sau3AI	GATC	5 cut(s)	37, 79, 103, 183, 1204
Sau96I	GGNCC	3 cut(s)	117, 299, 1199
SchI	GAGTC	3 cut(s)	28, 866, 1404
ScrFI	CCNGG	1 cut(s)	303
SfaNI	GCATC	5 cut(s)	157, 205, 457, 949, 1417
SfuI	TTCGAA	1 cut(s)	897
SinI	GGWCC	2 cut(s)	117, 299
SmiMI	CAYNNNNRTG	2 cut(s)	314, 1274
SmlI	CTYRAG	1 cut(s)	1129
SmoI	CTYRAG	1 cut(s)	1129
SsiI	CCGC	5 cut(s)	170, 453, 621, 1109, 1335
SspMI	CTAG	2 cut(s)	1014, 1239
StyD4I	CCNGG	1 cut(s)	301
StyI	CCWWGG	2 cut(s)	375, 1023
TaaI	ACNGT	6 cut(s)	256, 427, 448, 1050, 1447, 1499
TaiI	ACGT	4 cut(s)	478, 603, 777, 975
TaqI	TCGA	3 cut(s)	870, 897, 1215
TauI	GCSGC	3 cut(s)	173, 1112, 1337
TfiI	GAWTC	3 cut(s)	240, 1485, 1491
TscAI	CASTG	7 cut(s)	148, 250, 451, 508, 985, 1101, 1504
TseFI	GTSAC	4 cut(s)	305, 442, 1168, 1179
TseI	GCWGC	1 cut(s)	1121
Tsp45I	GTSAC	4 cut(s)	305, 442, 1168, 1179
TspDTI	ATGAA	5 cut(s)	148, 264, 407, 549, 1493
TspGWI	ACGGA	1 cut(s)	114
TspRI	CASTG	7 cut(s)	148, 250, 451, 508, 985, 1101, 1504
VpaK11BI	GGWCC	2 cut(s)	117, 299
VspI	ATTAAT	1 cut(s)	1080
XapI	RAATTY	5 cut(s)	733, 1017, 1217, 1242, 1358
XbaI	TCTAGA	1 cut(s)	1013
XceI	RCATGY	1 cut(s)	819
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1219
XmnI	GAANNNNTTC	2 cut(s)	255, 1049
XspI	CTAG	2 cut(s)	1014, 1239
Zsp2I	ATGCAT	2 cut(s)	525, 817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.