Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Forward (+)

28269179 .. 28276767

Gene Structure 7589 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG128300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGATAACTCAGCAGCACCGGGTGGCCGCGTTCCTTTCCCAGCCTGATCAGTCTTCTGAAGAGCCAGCTCCAGTTGTAGATGTTAAAGCTGGAACACCAAAGCCTGATTCCCTCTCCCAGCTTAGACCTGAATGCAAAGTGCCCAAACCATCAGAACCCGAAGAGTTTACTGTTCAGCTCCCTCAAGGAATTAGTGGAGAAGAACTGGATGTTATGAAGCTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGTAGAGAGAGTAAAAACCCCCAGTTCTATTTTCTCAATCATAAACATAGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATGCATATTCAAAGGTGTTGATGACAGAAGAAGGGATGACAGAGAAACTGAAGAAGAACGCGGCGGACATGACCATCGTGCTAGAGCGGTGTGTGCATCGGCTGGGGTGGGAGCATTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCGCTGAGACTTGAAGAGGTTATAAGTAGGAGCAAAGTCGTTATGGAAGCAGATGATAATGTCGAGGAGCATAGGGATGTTGAAATGGATTTGGATGAAGAAGAGATGCAGCTTGTTGAAGAAGGCATGAAAGTAACGGAGGTGGAACAAGCACCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGAGAGGATGATCCAATCCAGTGCCGAAAGAGACATGACGATTTCCCCCATTACCGGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGGCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGAGTTTGGAAAGCAGGACAAGCAGCAGGTCATATGGGATGGTCATGCTGGAAGCACTGGCCGCGCAGCAAATCAAGCCATGTCACAGAATGCCAATGGAGGTGATAAAACTGATGTTGTGAACAATGAGGTAAGGAACCTTCCTGGTCAGGCGAGACCTTCAGTTCTTCCTCTTCCACCACCTGGTGTTGTTGCCGTTAATCTTCCTAGTGTTCCTGCAAACACAGTTCAGTATGCAGGTACAAATAGCAGTGATTTCCCTGTCCAATTTCCATTGGTTAAGACTACTATGCCTCCGTCAATGTTTATGTCTGCAGCTAGTATACCTGTACCTCCTCCACCTGTATCTGAGTTTACAACCATGCAAATGGCCTACATACCTACAAACACAATGCCGATGCCTCCACTGCCTTTGCCTCATGTGCGGCCACCAACACCTCCGCATGCAGAACCTAAGCCAAAGCGACAGAAGCTTGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCATCCGGGACCGGTCGGCATCAATATATCTGTTTCCATTGTTGACGAAGGTAACCTCAGAGGACAACTTTTGGAGATCACAGTGCAGTCTTTATCAGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTAGGGAAATCCAGCTTCCGGCAAACAAACAGAAATTGAGTGGAAATACGGGCTTTCTTAAAGACAATTTGTCCCTTGCATATTACAATGTAGGGGCAGGACAAACACTTGCTCTTTCAATAAGAGAGCGTGGTGGAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

620

Amino Acids

69.5

Weight (kDa)

5.21

Isoelectric Point (pI)

54.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	69 - 120	1.4e-17	Surp module
PRP21_like_P	PF12230	139 - 338	2.9e-47	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	559 - 615	1.6e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	629
Acc36I	ACCTGC	2 cut(s)	1087, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	1253
AccBSI	CCGCTC	1 cut(s)	439
AccI	GTMKAC	1 cut(s)	1393
AccII	CGCG	3 cut(s)	29, 413, 1134
AciI	CCGC	9 cut(s)	27, 350, 413, 416, 439, 608, 1132, 1495, 1511
AclWI	GGATC	2 cut(s)	799, 899
AcoI	YGGCCR	3 cut(s)	24, 1129, 1496
AcsI	RAATTY	2 cut(s)	1574, 1710
AcuI	CTGAAG	4 cut(s)	78, 422, 516, 1215
AdeI	CACNNNGTG	2 cut(s)	22, 1256
AfaI	GTAC	2 cut(s)	1312, 1401
AfiI	CCNNNNNNNGG	4 cut(s)	848, 849, 1253, 1732
AgeI	ACCGGT	1 cut(s)	1597
AgsI	TTSAA	7 cut(s)	331, 363, 620, 689, 725, 1554, 1833
AhdI	GACNNNNNGTC	1 cut(s)	1783
AhlI	ACTAGT	1 cut(s)	956
AjnI	CCWGG	2 cut(s)	1213, 1252
AjuI	GAANNNNNNNTTGG	2 cut(s)	91, 123
Alw21I	GWGCWC	1 cut(s)	885
Alw26I	GTCTC	5 cut(s)	607, 781, 819, 947, 1219
AlwI	GGATC	2 cut(s)	799, 899
AlwNI	CAGNNNCTG	1 cut(s)	1688
AoxI	GGCC	5 cut(s)	24, 1019, 1129, 1440, 1496
ApeKI	GCWGC	6 cut(s)	13, 530, 715, 1093, 1136, 1385
ApoI	RAATTY	2 cut(s)	1574, 1710
AsiGI	ACCGGT	1 cut(s)	1597
AspLEI	GCGC	1 cut(s)	1136
AspS9I	GGNCC	1 cut(s)	1595
AsuC2I	CCSGG	4 cut(s)	20, 850, 1018, 1593
AsuHPI	GGTGA	1 cut(s)	1184
AvaII	GGWCC	1 cut(s)	1595
AxyI	CCTNAGG	1 cut(s)	792
BaeGI	GKGCMC	1 cut(s)	144
BarI	GAAGNNNNNNTAC	2 cut(s)	1194, 1226
BbsI	GAAGAC	2 cut(s)	45, 497
Bbv12I	GWGCWC	1 cut(s)	885
BbvI	GCAGC	6 cut(s)	25, 517, 727, 1105, 1148, 1397
BccI	CCATC	3 cut(s)	157, 434, 1103
BceAI	ACGGC	1 cut(s)	1250
BciT130I	CCWGG	2 cut(s)	1215, 1254
BclI	TGATCA	1 cut(s)	46
BcnI	CCSGG	4 cut(s)	20, 850, 1018, 1593
BcoDI	GTCTC	5 cut(s)	607, 781, 819, 947, 1219
BcuI	ACTAGT	1 cut(s)	956
BfaI	CTAG	5 cut(s)	434, 957, 1278, 1389, 1716
BfmI	CTRYAG	1 cut(s)	1383
BfuAI	ACCTGC	2 cut(s)	1087, 1298
BglII	AGATCT	1 cut(s)	984
Bme1390I	CCNGG	6 cut(s)	20, 850, 1018, 1215, 1254, 1593
Bme18I	GGWCC	1 cut(s)	1595
BmeRI	GACNNNNNGTC	1 cut(s)	1783
BmgT120I	GGNCC	1 cut(s)	1595
BmiI	GGNNCC	3 cut(s)	1036, 1208, 1596
BmrFI	CCNGG	6 cut(s)	20, 850, 1018, 1215, 1254, 1593
BmrI	ACTGGG	2 cut(s)	223, 289
BmsI	GCATC	6 cut(s)	343, 457, 702, 1458, 1597, 1614
BmuI	ACTGGG	2 cut(s)	223, 289
BpiI	GAAGAC	2 cut(s)	45, 497
BpmI	CTGGAG	1 cut(s)	54
Bpu10I	CCTNAGC	2 cut(s)	972, 1524
BpuEI	CTTGAG	2 cut(s)	168, 973
BpuMI	CCSGG	4 cut(s)	20, 850, 1018, 1593
BsaI	GGTCTC	2 cut(s)	781, 1219
BsaJI	CCNNGG	1 cut(s)	849
BsaWI	WCCGGW	1 cut(s)	1597
BsaXI	ACNNNNNCTCC	2 cut(s)	1348, 1378
Bsc4I	CCNNNNNNNGG	4 cut(s)	848, 849, 1253, 1732
Bse118I	RCCGGY	1 cut(s)	1597
Bse1I	ACTGG	7 cut(s)	71, 210, 229, 295, 785, 813, 1132
Bse21I	CCTNAGG	1 cut(s)	792
BseBI	CCWGG	2 cut(s)	1215, 1254
BseDI	CCNNGG	1 cut(s)	849
BseLI	CCNNNNNNNGG	4 cut(s)	848, 849, 1253, 1732
BseMII	CTCAG	8 cut(s)	23, 602, 783, 870, 986, 1062, 1410, 1657
BseNI	ACTGG	7 cut(s)	71, 210, 229, 295, 785, 813, 1132
BseRI	GAGGAG	5 cut(s)	594, 686, 809, 1058, 1395
BseSI	GKGCMC	1 cut(s)	144
BseXI	GCAGC	6 cut(s)	25, 517, 727, 1105, 1148, 1397
BseYI	CCCAGC	3 cut(s)	39, 117, 454
BsgI	GTGCAG	1 cut(s)	1691
Bsh1236I	CGCG	3 cut(s)	29, 413, 1134
Bsh1285I	CGRYCG	1 cut(s)	1602
BshFI	GGCC	5 cut(s)	26, 1021, 1131, 1442, 1498
BshTI	ACCGGT	1 cut(s)	1597
BsiEI	CGRYCG	1 cut(s)	1602
BsiHKAI	GWGCWC	1 cut(s)	885
BsiSI	CCGG	6 cut(s)	19, 849, 1018, 1592, 1598, 1733
BslFI	GGGAC	3 cut(s)	845, 1608, 1771
BslI	CCNNNNNNNGG	4 cut(s)	848, 849, 1253, 1732
BsmAI	GTCTC	5 cut(s)	607, 781, 819, 947, 1219
BsmFI	GGGAC	3 cut(s)	845, 1608, 1771
BsmI	GAATGC	2 cut(s)	137, 1165
BsnI	GGCC	5 cut(s)	26, 1021, 1131, 1442, 1498
Bso31I	GGTCTC	2 cut(s)	781, 1219
Bsp1286I	GDGCHC	2 cut(s)	144, 885
Bsp143I	GATC	5 cut(s)	46, 804, 904, 984, 1662
BspACI	CCGC	9 cut(s)	27, 350, 413, 416, 439, 608, 1132, 1495, 1511
BspANI	GGCC	5 cut(s)	26, 1021, 1131, 1442, 1498
BspCNI	CTCAG	8 cut(s)	22, 603, 784, 871, 985, 1063, 1411, 1656
BspFNI	CGCG	3 cut(s)	29, 413, 1134
BspLI	GGNNCC	3 cut(s)	1036, 1208, 1596
BspMAI	CTGCAG	1 cut(s)	1387
BspMI	ACCTGC	2 cut(s)	1087, 1298
BspPI	GGATC	2 cut(s)	799, 899
BspQI	GCTCTTC	1 cut(s)	54
BspTNI	GGTCTC	2 cut(s)	781, 1219
BsrBI	CCGCTC	1 cut(s)	439
BsrFI	RCCGGY	1 cut(s)	1597
BsrI	ACTGG	7 cut(s)	71, 210, 229, 295, 785, 813, 1132
BssAI	RCCGGY	1 cut(s)	1597
BssECI	CCNNGG	1 cut(s)	849
BssMI	GATC	5 cut(s)	46, 804, 904, 984, 1662
BssNAI	GTATAC	1 cut(s)	1394
Bst1107I	GTATAC	1 cut(s)	1394
Bst2UI	CCWGG	2 cut(s)	1215, 1254
Bst4CI	ACNGT	4 cut(s)	172, 1297, 1669, 1690
Bst6I	CTCTTC	6 cut(s)	54, 156, 615, 702, 779, 1248
BstC8I	GCNNGC	3 cut(s)	66, 480, 1515
BstEII	GGTNACC	1 cut(s)	1637
BstFNI	CGCG	3 cut(s)	29, 413, 1134
BstHHI	GCGC	1 cut(s)	1136
BstKTI	GATC	5 cut(s)	49, 807, 907, 987, 1665
BstMAI	GTCTC	5 cut(s)	607, 781, 819, 947, 1219
BstMBI	GATC	5 cut(s)	46, 804, 904, 984, 1662
BstMCI	CGRYCG	1 cut(s)	1602
BstMWI	GCNNNNNNNGC	9 cut(s)	445, 484, 1067, 1090, 1131, 1145, 1477, 1492, 1540
BstNI	CCWGG	2 cut(s)	1215, 1254
BstNSI	RCATGY	1 cut(s)	1517
BstPI	GGTNACC	1 cut(s)	1637
BstSCI	CCNGG	6 cut(s)	18, 848, 1016, 1213, 1252, 1591
BstSFI	CTRYAG	1 cut(s)	1383
BstSLI	GKGCMC	1 cut(s)	144
BstUI	CGCG	3 cut(s)	29, 413, 1134
BstV1I	GCAGC	6 cut(s)	25, 517, 727, 1105, 1148, 1397
BstV2I	GAAGAC	2 cut(s)	45, 497
BstX2I	RGATCY	1 cut(s)	984
BstXI	CCANNNNNNTGG	1 cut(s)	1438
BstYI	RGATCY	1 cut(s)	984
BstZ17I	GTATAC	1 cut(s)	1394
Bsu36I	CCTNAGG	1 cut(s)	792
BsuRI	GGCC	5 cut(s)	26, 1021, 1131, 1442, 1498
BtsI	GCAGTG	2 cut(s)	1327, 1475
BtsIMutI	CAGTG	5 cut(s)	820, 1125, 1327, 1475, 1674
BveI	ACCTGC	2 cut(s)	1087, 1298
Cac8I	GCNNGC	3 cut(s)	66, 480, 1515
CaiI	CAGNNNCTG	1 cut(s)	1688
CfoI	GCGC	1 cut(s)	1136
Cfr10I	RCCGGY	1 cut(s)	1597
Cfr13I	GGNCC	1 cut(s)	1595
CsiI	ACCWGGT	1 cut(s)	1252
Csp6I	GTAC	2 cut(s)	1311, 1400
CspAI	ACCGGT	1 cut(s)	1597
CspCI	CAANNNNNGTGG	2 cut(s)	1464, 1499
CviAII	CATG	9 cut(s)	421, 733, 829, 886, 1115, 1150, 1432, 1490, 1514
CviQI	GTAC	2 cut(s)	1311, 1400
DpnI	GATC	5 cut(s)	48, 806, 906, 986, 1664
DpnII	GATC	5 cut(s)	46, 804, 904, 984, 1662
DraIII	CACNNNGTG	2 cut(s)	22, 1256
DriI	GACNNNNNGTC	1 cut(s)	1783
EaeI	YGGCCR	3 cut(s)	24, 1129, 1496
Eam1104I	CTCTTC	6 cut(s)	54, 156, 615, 702, 779, 1248
Eam1105I	GACNNNNNGTC	1 cut(s)	1783
EarI	CTCTTC	6 cut(s)	54, 156, 615, 702, 779, 1248
EciI	GGCGGA	2 cut(s)	365, 431
Eco31I	GGTCTC	2 cut(s)	781, 1219
Eco47I	GGWCC	1 cut(s)	1595
Eco57I	CTGAAG	4 cut(s)	78, 422, 516, 1215
Eco81I	CCTNAGG	1 cut(s)	792
Eco91I	GGTNACC	1 cut(s)	1637
EcoO65I	GGTNACC	1 cut(s)	1637
EcoRII	CCWGG	2 cut(s)	1213, 1252
EcoT22I	ATGCAT	1 cut(s)	358
FaeI	CATG	9 cut(s)	424, 736, 832, 889, 1118, 1153, 1435, 1493, 1517
FaqI	GGGAC	3 cut(s)	845, 1608, 1771
FatI	CATG	9 cut(s)	420, 732, 828, 885, 1114, 1149, 1431, 1489, 1513
FauNDI	CATATG	1 cut(s)	1103
FbaI	TGATCA	1 cut(s)	46
FblI	GTMKAC	1 cut(s)	1393
FspBI	CTAG	5 cut(s)	434, 957, 1278, 1389, 1716
GlaI	GCGC	1 cut(s)	1135
GsaI	CCCAGC	3 cut(s)	43, 121, 458
GsuI	CTGGAG	1 cut(s)	54
HaeIII	GGCC	5 cut(s)	26, 1021, 1131, 1442, 1498
HapII	CCGG	6 cut(s)	19, 849, 1018, 1592, 1598, 1733
HhaI	GCGC	1 cut(s)	1136
Hin1II	CATG	9 cut(s)	424, 736, 832, 889, 1118, 1153, 1435, 1493, 1517
Hin6I	GCGC	1 cut(s)	1134
HinP1I	GCGC	1 cut(s)	1134
HincII	GTYRAC	1 cut(s)	1630
HindII	GTYRAC	1 cut(s)	1630
HindIII	AAGCTT	1 cut(s)	1541
HinfI	GANTC	3 cut(s)	107, 946, 1550
HpaII	CCGG	6 cut(s)	19, 849, 1018, 1592, 1598, 1733
HphI	GGTGA	1 cut(s)	1184
Hpy166II	GTNNAC	6 cut(s)	168, 1003, 1192, 1394, 1425, 1630
Hpy188I	TCNGA	8 cut(s)	58, 154, 243, 880, 1420, 1646, 1684, 1701
Hpy188III	TCNNGA	4 cut(s)	950, 974, 990, 1565
Hpy8I	GTNNAC	6 cut(s)	168, 1003, 1192, 1394, 1425, 1630
HpyAV	CCTTC	5 cut(s)	377, 722, 1220, 1239, 1628
HpyCH4III	ACNGT	4 cut(s)	172, 1297, 1669, 1690
HpyF10VI	GCNNNNNNNGC	9 cut(s)	445, 484, 1067, 1090, 1131, 1145, 1477, 1492, 1540
Hsp92II	CATG	9 cut(s)	424, 736, 832, 889, 1118, 1153, 1435, 1493, 1517
HspAI	GCGC	1 cut(s)	1134
Ksp22I	TGATCA	1 cut(s)	46
Kzo9I	GATC	5 cut(s)	46, 804, 904, 984, 1662
LguI	GCTCTTC	1 cut(s)	54
LmnI	GCTCC	6 cut(s)	73, 183, 463, 636, 673, 853
Lsp1109I	GCAGC	6 cut(s)	25, 517, 727, 1105, 1148, 1397
LweI	GCATC	6 cut(s)	343, 457, 702, 1458, 1597, 1614
MabI	ACCWGGT	1 cut(s)	1252
MaeI	CTAG	5 cut(s)	434, 957, 1278, 1389, 1716
MaeIII	GTNAC	4 cut(s)	519, 739, 1152, 1637
MalI	GATC	5 cut(s)	48, 806, 906, 986, 1664
MbiI	CCGCTC	1 cut(s)	439
MboI	GATC	5 cut(s)	46, 804, 904, 984, 1662
MfeI	CAATTG	1 cut(s)	534
MflI	RGATCY	1 cut(s)	984
MhlI	GDGCHC	2 cut(s)	144, 885
MluCI	AATT	9 cut(s)	189, 266, 534, 768, 1337, 1574, 1710, 1748, 1780
Mph1103I	ATGCAT	1 cut(s)	358
MseI	TTAA	5 cut(s)	84, 1065, 1269, 1350, 1773
MslI	CAYNNNNRTG	3 cut(s)	549, 681, 1436
MspA1I	CMGCKG	1 cut(s)	610
MspI	CCGG	6 cut(s)	19, 849, 1018, 1592, 1598, 1733
MspR9I	CCNGG	6 cut(s)	20, 850, 1018, 1215, 1254, 1593
MunI	CAATTG	1 cut(s)	534
Mva1269I	GAATGC	2 cut(s)	137, 1165
MvaI	CCWGG	2 cut(s)	1215, 1254
MvnI	CGCG	3 cut(s)	29, 413, 1134
MwoI	GCNNNNNNNGC	9 cut(s)	445, 484, 1067, 1090, 1131, 1145, 1477, 1492, 1540
NciI	CCSGG	4 cut(s)	20, 850, 1018, 1593
NdeI	CATATG	1 cut(s)	1103
NdeII	GATC	5 cut(s)	46, 804, 904, 984, 1662
NlaIII	CATG	9 cut(s)	424, 736, 832, 889, 1118, 1153, 1435, 1493, 1517
NlaIV	GGNNCC	3 cut(s)	1036, 1208, 1596
NmuCI	GTSAC	1 cut(s)	1152
NsiI	ATGCAT	1 cut(s)	358
NspI	RCATGY	1 cut(s)	1517
PaeI	GCATGC	1 cut(s)	1517
PciSI	GCTCTTC	1 cut(s)	54
PctI	GAATGC	2 cut(s)	137, 1165
PfeI	GAWTC	3 cut(s)	107, 946, 1550
PflMI	CCANNNNNTGG	1 cut(s)	1253
PfoI	TCCNGGA	1 cut(s)	1591
PinAI	ACCGGT	1 cut(s)	1597
PsiI	TTATAA	1 cut(s)	629
Psp6I	CCWGG	2 cut(s)	1213, 1252
PspEI	GGTNACC	1 cut(s)	1637
PspFI	CCCAGC	3 cut(s)	39, 117, 454
PspGI	CCWGG	2 cut(s)	1213, 1252
PspN4I	GGNNCC	3 cut(s)	1036, 1208, 1596
PspPI	GGNCC	1 cut(s)	1595
PstI	CTGCAG	1 cut(s)	1387
PstNI	CAGNNNCTG	1 cut(s)	1688
PsuI	RGATCY	1 cut(s)	984
RsaI	GTAC	2 cut(s)	1312, 1401
RsaNI	GTAC	2 cut(s)	1311, 1400
RseI	CAYNNNNRTG	3 cut(s)	549, 681, 1436
SapI	GCTCTTC	1 cut(s)	54
SaqAI	TTAA	5 cut(s)	84, 1065, 1269, 1350, 1773
Sau3AI	GATC	5 cut(s)	46, 804, 904, 984, 1662
Sau96I	GGNCC	1 cut(s)	1595
ScrFI	CCNGG	6 cut(s)	20, 850, 1018, 1215, 1254, 1593
SduI	GDGCHC	2 cut(s)	144, 885
SexAI	ACCWGGT	1 cut(s)	1252
SfaNI	GCATC	6 cut(s)	343, 457, 702, 1458, 1597, 1614
SfcI	CTRYAG	1 cut(s)	1383
SinI	GGWCC	1 cut(s)	1595
SmiMI	CAYNNNNRTG	3 cut(s)	549, 681, 1436
SmlI	CTYRAG	2 cut(s)	183, 988
SmoI	CTYRAG	2 cut(s)	183, 988
SpeI	ACTAGT	1 cut(s)	956
SphI	GCATGC	1 cut(s)	1517
Sse9I	AATT	9 cut(s)	189, 266, 534, 768, 1337, 1574, 1710, 1748, 1780
SsiI	CCGC	9 cut(s)	27, 350, 413, 416, 439, 608, 1132, 1495, 1511
SspMI	CTAG	5 cut(s)	434, 957, 1278, 1389, 1716
StyD4I	CCNGG	6 cut(s)	18, 848, 1016, 1213, 1252, 1591
TaaI	ACNGT	4 cut(s)	172, 1297, 1669, 1690
TaqI	TCGA	2 cut(s)	561, 669
TasI	AATT	9 cut(s)	189, 266, 534, 768, 1337, 1574, 1710, 1748, 1780
TauI	GCSGC	4 cut(s)	29, 416, 1134, 1498
TfiI	GAWTC	3 cut(s)	107, 946, 1550
Tru1I	TTAA	5 cut(s)	84, 1065, 1269, 1350, 1773
Tru9I	TTAA	5 cut(s)	84, 1065, 1269, 1350, 1773
TscAI	CASTG	5 cut(s)	820, 1132, 1327, 1482, 1674
TseFI	GTSAC	1 cut(s)	1152
TseI	GCWGC	6 cut(s)	13, 530, 715, 1093, 1136, 1385
Tsp45I	GTSAC	1 cut(s)	1152
TspDTI	ATGAA	3 cut(s)	230, 717, 749
TspGWI	ACGGA	2 cut(s)	758, 1356
TspRI	CASTG	5 cut(s)	820, 1132, 1327, 1482, 1674
Van91I	CCANNNNNTGG	1 cut(s)	1253
VpaK11BI	GGWCC	1 cut(s)	1595
XapI	RAATTY	2 cut(s)	1574, 1710
XceI	RCATGY	1 cut(s)	1517
XmiI	GTMKAC	1 cut(s)	1393
XspI	CTAG	5 cut(s)	434, 957, 1278, 1389, 1716
Zsp2I	ATGCAT	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.