Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Forward (+)

58757147 .. 58759240

Gene Structure 2094 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004366

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGATGATGATACGTTCCATCTCGCCCTTACCAGCTCCTCCTACTTCTGTTACGACACATACAAAGCCTATTGGCATCATCCCTCCTCCTCCGGAAACAGCAAAAATCATCAACAAAACTGCCAAGCACGTTTCCAAGAATGGACCGGAATTTGAGAAGAAGGTCATCACTGAAAAGACTAAACTAAATCCAGATCCAAAATTCGACTTTTTGAATTCCTCACATCCCTACCATGCATATTATCAGCACCGGGTGGCCGCGTTCCTTTCCCAGCCTGATCAGTCTTCTGAAGAGCCAGCTCCAGTCGTAGATGTTAAAGTTGGAACACCAAAGCCTGATTCCCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCCGAACCACCAGAACCCGAAGACTTTACTGTTCAGCTCCCTCAAGGAATTAATGGAGAAGAACTGGATTTTATGAAGCTCACAGCTCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGCAGAGAGAGTAAAAACCCCCAGTTCTATTTTCTCAATCATAAACATTGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATACATATTCAAAGGTGTTGATGCCACAAGAAGGGATGACAGAGAAACTGAAGAAGAACGCGGCGGACATGACCATCGTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGCATTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGCAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCGTAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCGCTGAGCCTTGAAGAGGTTATATGTAGGAGCAAAGTTGTGATGGAAGCAGATGATAATGTCGAGGAGCATAGGGATGTTGAAATGGATTTGGATGAAGAAGAGGTGCAGCTTGTTGAAGAAGGCATGAAAGTAACAGAGGTGGAACAAGCACCAATGAGAATTGTGAAGAACTGGAAGAGACCCGAGGAGAGGATGATCCAATCCAGTGCTGAAAGAAACATGACGATTTCCCCCATTACCTGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGTCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGAGATTGGAAAGCAGGAAAAGCAGCAGGTCATATGGGATGGTCATGCTGGAAGCACTGGCCGCGCAGCAAATCAAGCCATGTCACAGAATGCCAATGGAGGTGATAAAACTGATGTTGTGAACAATGAGGCAAGGAACCTTCCTGGTCCGGCGAGACCTTTAGTTCTTCCTCTTCCACCACCTGGTGTTCTTGCCGTTAATCTTCCTAGTGTTCCTGCAAACACAGTTCAGTATGCAGGTACAAATAGCAGTGATTTCCCTGTCCAATTTACATTGGTTAAGACTACTATGCCTCCGTCAATGTTTATGTCTGCAGCTAGTATACCTGTACCTCCTCCACCAGTATCTGAGTTTACAACCATGCAAATGGCTTACATACCTACAAACACAATGCCGATGCCTCCACCGCCTTTGCCTCATGTGCGGCCACCAACACCTCCGCATGCAGAACCTAAGCCAAAGCGACAGATGCTTGATGTTTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCACCCGGGACCGGTCGGCATCAATATATCTGTTCCCAATGTTGATGAAGGTAACCTCAAGGGACAACTTTTGGAGATCACAGTGCAGTCTTTATCTGAAACTGTTGGCATTCTGAAAGAGAAAATTTCTGGGGAATTCCAGCTTCCGGCAAACAAACTGAAATTGAGTGGAAATGCGGGCTTTCTAAAAGACAATTTGTCCCTTGCATATTACAATGTAGGCGCAGGACAAACACTTGCTCTTTCATTAAGAGAGCGTGGTGGAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

698

Amino Acids

78.14

Weight (kDa)

5.51

Isoelectric Point (pI)

53.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	35 - 88	1e-17	Surp module
Surp	PF01805	146 - 196	6e-16	Surp module
PRP21_like_P	PF12230	216 - 415	3.3e-45	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	626 - 692	5.7e-07	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1318, 1529
AccB7I	CCANNNNNTGG	2 cut(s)	1080, 1484
AccI	GTMKAC	2 cut(s)	801, 1624
AccII	CGCG	3 cut(s)	260, 644, 1365
AccIII	TCCGGA	1 cut(s)	91
AclWI	GGATC	3 cut(s)	188, 1030, 1130
AcoI	YGGCCR	3 cut(s)	255, 1360, 1727
AcsI	RAATTY	6 cut(s)	149, 200, 214, 1805, 1941, 1952
AcuI	CTGAAG	3 cut(s)	309, 653, 747
AdeI	CACNNNGTG	2 cut(s)	253, 1487
AfaI	GTAC	2 cut(s)	1543, 1632
AfiI	CCNNNNNNNGG	7 cut(s)	614, 853, 1029, 1080, 1484, 1828, 1963
AgeI	ACCGGT	1 cut(s)	1828
AgsI	TTSAA	7 cut(s)	214, 562, 594, 851, 920, 956, 1785
AhdI	GACNNNNNGTC	1 cut(s)	2014
AhlI	ACTAGT	1 cut(s)	1187
AjnI	CCWGG	3 cut(s)	1079, 1444, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	322, 354
Alw21I	GWGCWC	1 cut(s)	1116
Alw26I	GTCTC	3 cut(s)	1012, 1178, 1450
AlwI	GGATC	3 cut(s)	188, 1030, 1130
AlwNI	CAGNNNCTG	1 cut(s)	1649
Ama87I	CYCGRG	2 cut(s)	1022, 1822
Aor13HI	TCCGGA	1 cut(s)	91
AoxI	GGCC	3 cut(s)	255, 1360, 1727
ApeKI	GCWGC	6 cut(s)	742, 761, 946, 1324, 1367, 1616
ApoI	RAATTY	6 cut(s)	149, 200, 214, 1805, 1941, 1952
AseI	ATTAAT	1 cut(s)	423
AsiGI	ACCGGT	1 cut(s)	1828
AspLEI	GCGC	2 cut(s)	1367, 2042
AspS9I	GGNCC	3 cut(s)	143, 1448, 1826
AsuC2I	CCSGG	3 cut(s)	251, 1823, 1824
AsuHPI	GGTGA	1 cut(s)	1415
AvaI	CYCGRG	2 cut(s)	1022, 1822
AvaII	GGWCC	3 cut(s)	143, 1448, 1826
BaeGI	GKGCMC	1 cut(s)	375
BbsI	GAAGAC	3 cut(s)	276, 399, 728
Bbv12I	GWGCWC	1 cut(s)	1116
BbvI	GCAGC	6 cut(s)	748, 754, 958, 1336, 1379, 1628
BccI	CCATC	4 cut(s)	26, 665, 874, 1334
BceAI	ACGGC	1 cut(s)	1481
BciT130I	CCWGG	3 cut(s)	1081, 1446, 1485
BciVI	GTATCC	1 cut(s)	577
BclI	TGATCA	1 cut(s)	277
BcnI	CCSGG	3 cut(s)	251, 1823, 1824
BcoDI	GTCTC	3 cut(s)	1012, 1178, 1450
BcuI	ACTAGT	1 cut(s)	1187
BfaI	CTAG	4 cut(s)	665, 1188, 1509, 1620
BfmI	CTRYAG	1 cut(s)	1614
BfuAI	ACCTGC	2 cut(s)	1318, 1529
BfuI	GTATCC	1 cut(s)	577
BglII	AGATCT	1 cut(s)	1215
BlpI	GCTNAGC	1 cut(s)	842
Bme1390I	CCNGG	6 cut(s)	251, 1081, 1446, 1485, 1823, 1824
Bme18I	GGWCC	3 cut(s)	143, 1448, 1826
BmeRI	GACNNNNNGTC	1 cut(s)	2014
BmeT110I	CYCGRG	2 cut(s)	1022, 1822
BmgT120I	GGNCC	3 cut(s)	143, 1448, 1826
BmiI	GGNNCC	3 cut(s)	1267, 1439, 1827
BmrFI	CCNGG	6 cut(s)	251, 1081, 1446, 1485, 1823, 1824
BmrI	ACTGGG	1 cut(s)	520
BmsI	GCATC	6 cut(s)	84, 594, 688, 1689, 1761, 1845
BmuI	ACTGGG	1 cut(s)	520
BpiI	GAAGAC	3 cut(s)	276, 399, 728
BpmI	CTGGAG	2 cut(s)	285, 707
Bpu10I	CCTNAGC	2 cut(s)	1203, 1755
Bpu1102I	GCTNAGC	1 cut(s)	842
BpuEI	CTTGAG	3 cut(s)	399, 1204, 1859
BpuMI	CCSGG	3 cut(s)	251, 1823, 1824
BsaI	GGTCTC	2 cut(s)	1012, 1450
BsaJI	CCNNGG	3 cut(s)	1023, 1080, 1822
BsaWI	WCCGGW	3 cut(s)	91, 145, 1828
BsaXI	ACNNNNNCTCC	2 cut(s)	1579, 1609
Bsc4I	CCNNNNNNNGG	7 cut(s)	614, 853, 1029, 1080, 1484, 1828, 1963
Bse118I	RCCGGY	1 cut(s)	1828
Bse1I	ACTGG	7 cut(s)	302, 441, 526, 1016, 1044, 1363, 1643
Bse3DI	GCAATG	1 cut(s)	550
BseAI	TCCGGA	1 cut(s)	91
BseBI	CCWGG	3 cut(s)	1081, 1446, 1485
BseDI	CCNNGG	3 cut(s)	1023, 1080, 1822
BseGI	GGATG	9 cut(s)	78, 223, 624, 826, 919, 937, 1038, 1170, 1345
BseLI	CCNNNNNNNGG	7 cut(s)	614, 853, 1029, 1080, 1484, 1828, 1963
BseMI	GCAATG	1 cut(s)	550
BseMII	CTCAG	6 cut(s)	473, 833, 1101, 1217, 1293, 1641
BseNI	ACTGG	7 cut(s)	302, 441, 526, 1016, 1044, 1363, 1643
BseRI	GAGGAG	8 cut(s)	27, 75, 78, 825, 917, 1040, 1289, 1626
BseSI	GKGCMC	1 cut(s)	375
BseXI	GCAGC	6 cut(s)	748, 754, 958, 1336, 1379, 1628
BseYI	CCCAGC	2 cut(s)	270, 348
BsgI	GTGCAG	2 cut(s)	965, 1922
Bsh1236I	CGCG	3 cut(s)	260, 644, 1365
Bsh1285I	CGRYCG	1 cut(s)	1833
BshFI	GGCC	3 cut(s)	257, 1362, 1729
BshTI	ACCGGT	1 cut(s)	1828
BsiEI	CGRYCG	1 cut(s)	1833
BsiHKAI	GWGCWC	1 cut(s)	1116
BsiHKCI	CYCGRG	2 cut(s)	1022, 1822
BsiSI	CCGG	7 cut(s)	92, 146, 250, 1451, 1823, 1829, 1964
BslFI	GGGAC	4 cut(s)	1076, 1839, 1893, 2002
BslI	CCNNNNNNNGG	7 cut(s)	614, 853, 1029, 1080, 1484, 1828, 1963
BsmAI	GTCTC	3 cut(s)	1012, 1178, 1450
BsmFI	GGGAC	4 cut(s)	1076, 1839, 1893, 2002
BsmI	GAATGC	3 cut(s)	368, 1396, 1926
BsnI	GGCC	3 cut(s)	257, 1362, 1729
Bso31I	GGTCTC	2 cut(s)	1012, 1450
BsoBI	CYCGRG	2 cut(s)	1022, 1822
Bsp1286I	GDGCHC	2 cut(s)	375, 1116
Bsp13I	TCCGGA	1 cut(s)	91
Bsp143I	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
Bsp1720I	GCTNAGC	1 cut(s)	842
BspANI	GGCC	3 cut(s)	257, 1362, 1729
BspCNI	CTCAG	6 cut(s)	472, 834, 1102, 1216, 1294, 1642
BspEI	TCCGGA	1 cut(s)	91
BspFNI	CGCG	3 cut(s)	260, 644, 1365
BspLI	GGNNCC	3 cut(s)	1267, 1439, 1827
BspMAI	CTGCAG	1 cut(s)	1618
BspMI	ACCTGC	2 cut(s)	1318, 1529
BspPI	GGATC	3 cut(s)	188, 1030, 1130
BspQI	GCTCTTC	1 cut(s)	285
BspTNI	GGTCTC	2 cut(s)	1012, 1450
BsrDI	GCAATG	1 cut(s)	550
BsrFI	RCCGGY	1 cut(s)	1828
BsrI	ACTGG	7 cut(s)	302, 441, 526, 1016, 1044, 1363, 1643
BssAI	RCCGGY	1 cut(s)	1828
BssECI	CCNNGG	3 cut(s)	1023, 1080, 1822
BssMI	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
BssNAI	GTATAC	1 cut(s)	1625
Bst1107I	GTATAC	1 cut(s)	1625
Bst2UI	CCWGG	3 cut(s)	1081, 1446, 1485
Bst4CI	ACNGT	5 cut(s)	403, 672, 1528, 1900, 1921
Bst6I	CTCTTC	5 cut(s)	285, 846, 933, 1010, 1479
BstC8I	GCNNGC	4 cut(s)	297, 711, 1746, 1996
BstDEI	CTNAG	9 cut(s)	353, 459, 842, 1110, 1173, 1203, 1302, 1650, 1755
BstEII	GGTNACC	1 cut(s)	1868
BstENI	CCTNNNNNAGG	1 cut(s)	851
BstF5I	GGATG	9 cut(s)	78, 223, 624, 826, 919, 937, 1038, 1170, 1345
BstFNI	CGCG	3 cut(s)	260, 644, 1365
BstHHI	GCGC	2 cut(s)	1367, 2042
BstKTI	GATC	6 cut(s)	196, 280, 1038, 1138, 1218, 1896
BstMAI	GTCTC	3 cut(s)	1012, 1178, 1450
BstMBI	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
BstMCI	CGRYCG	1 cut(s)	1833
BstMWI	GCNNNNNNNGC	8 cut(s)	715, 1298, 1321, 1362, 1376, 1708, 1723, 1771
BstNI	CCWGG	3 cut(s)	1081, 1446, 1485
BstNSI	RCATGY	1 cut(s)	1748
BstPI	GGTNACC	1 cut(s)	1868
BstSCI	CCNGG	6 cut(s)	249, 1079, 1444, 1483, 1821, 1822
BstSFI	CTRYAG	1 cut(s)	1614
BstSLI	GKGCMC	1 cut(s)	375
BstUI	CGCG	3 cut(s)	260, 644, 1365
BstV1I	GCAGC	6 cut(s)	748, 754, 958, 1336, 1379, 1628
BstV2I	GAAGAC	3 cut(s)	276, 399, 728
BstX2I	RGATCY	2 cut(s)	193, 1215
BstXI	CCANNNNNNTGG	1 cut(s)	1669
BstYI	RGATCY	2 cut(s)	193, 1215
BstZ17I	GTATAC	1 cut(s)	1625
BsuI	GTATCC	1 cut(s)	577
BsuRI	GGCC	3 cut(s)	257, 1362, 1729
BtsCI	GGATG	9 cut(s)	78, 223, 624, 826, 919, 937, 1038, 1170, 1345
BtsI	GCAGTG	1 cut(s)	1558
BtsIMutI	CAGTG	5 cut(s)	168, 1051, 1356, 1558, 1905
BveI	ACCTGC	2 cut(s)	1318, 1529
Cac8I	GCNNGC	4 cut(s)	297, 711, 1746, 1996
CaiI	CAGNNNCTG	1 cut(s)	1649
CfoI	GCGC	2 cut(s)	1367, 2042
Cfr10I	RCCGGY	1 cut(s)	1828
Cfr13I	GGNCC	3 cut(s)	143, 1448, 1826
Cfr9I	CCCGGG	1 cut(s)	1822
CsiI	ACCWGGT	1 cut(s)	1483
Csp6I	GTAC	2 cut(s)	1542, 1631
CspAI	ACCGGT	1 cut(s)	1828
CspCI	CAANNNNNGTGG	2 cut(s)	1695, 1730
CviQI	GTAC	2 cut(s)	1542, 1631
DdeI	CTNAG	9 cut(s)	353, 459, 842, 1110, 1173, 1203, 1302, 1650, 1755
DpnI	GATC	6 cut(s)	195, 279, 1037, 1137, 1217, 1895
DpnII	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
DraIII	CACNNNGTG	2 cut(s)	253, 1487
DriI	GACNNNNNGTC	1 cut(s)	2014
EaeI	YGGCCR	3 cut(s)	255, 1360, 1727
Eam1104I	CTCTTC	5 cut(s)	285, 846, 933, 1010, 1479
Eam1105I	GACNNNNNGTC	1 cut(s)	2014
EarI	CTCTTC	5 cut(s)	285, 846, 933, 1010, 1479
EciI	GGCGGA	2 cut(s)	596, 662
Eco31I	GGTCTC	2 cut(s)	1012, 1450
Eco47I	GGWCC	3 cut(s)	143, 1448, 1826
Eco57I	CTGAAG	3 cut(s)	309, 653, 747
Eco88I	CYCGRG	2 cut(s)	1022, 1822
Eco91I	GGTNACC	1 cut(s)	1868
EcoNI	CCTNNNNNAGG	1 cut(s)	851
EcoO65I	GGTNACC	1 cut(s)	1868
EcoRI	GAATTC	2 cut(s)	214, 1952
EcoRII	CCWGG	3 cut(s)	1079, 1444, 1483
EcoT22I	ATGCAT	1 cut(s)	238
FaqI	GGGAC	4 cut(s)	1076, 1839, 1893, 2002
FauI	CCCGC	1 cut(s)	1987
FauNDI	CATATG	1 cut(s)	1334
FbaI	TGATCA	1 cut(s)	277
FblI	GTMKAC	2 cut(s)	801, 1624
FokI	GGATG	9 cut(s)	65, 210, 631, 833, 926, 944, 1045, 1177, 1352
FspBI	CTAG	4 cut(s)	665, 1188, 1509, 1620
GlaI	GCGC	2 cut(s)	1366, 2041
GsaI	CCCAGC	2 cut(s)	274, 352
GsuI	CTGGAG	2 cut(s)	285, 707
HaeIII	GGCC	3 cut(s)	257, 1362, 1729
HapII	CCGG	7 cut(s)	92, 146, 250, 1451, 1823, 1829, 1964
HhaI	GCGC	2 cut(s)	1367, 2042
Hin6I	GCGC	2 cut(s)	1365, 2040
HinP1I	GCGC	2 cut(s)	1365, 2040
HinfI	GANTC	2 cut(s)	338, 1177
HpaII	CCGG	7 cut(s)	92, 146, 250, 1451, 1823, 1829, 1964
HphI	GGTGA	1 cut(s)	1415
Hpy166II	GTNNAC	5 cut(s)	802, 1234, 1423, 1625, 1656
Hpy188I	TCNGA	6 cut(s)	289, 474, 1111, 1651, 1915, 1932
Hpy188III	TCNNGA	7 cut(s)	92, 191, 1181, 1205, 1221, 1253, 1796
Hpy8I	GTNNAC	5 cut(s)	802, 1234, 1423, 1625, 1656
HpyAV	CCTTC	5 cut(s)	154, 608, 953, 1451, 1859
HpyCH4III	ACNGT	5 cut(s)	403, 672, 1528, 1900, 1921
HpyCH4IV	ACGT	2 cut(s)	13, 129
HpyF10VI	GCNNNNNNNGC	8 cut(s)	715, 1298, 1321, 1362, 1376, 1708, 1723, 1771
HpyF3I	CTNAG	9 cut(s)	353, 459, 842, 1110, 1173, 1203, 1302, 1650, 1755
HpySE526I	ACGT	2 cut(s)	13, 129
HspAI	GCGC	2 cut(s)	1365, 2040
Kpn2I	TCCGGA	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	277
Kzo9I	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	7 cut(s)	40, 304, 414, 694, 867, 904, 1084
Lsp1109I	GCAGC	6 cut(s)	748, 754, 958, 1336, 1379, 1628
LweI	GCATC	6 cut(s)	84, 594, 688, 1689, 1761, 1845
MabI	ACCWGGT	1 cut(s)	1483
MaeI	CTAG	4 cut(s)	665, 1188, 1509, 1620
MaeII	ACGT	2 cut(s)	13, 129
MaeIII	GTNAC	5 cut(s)	49, 750, 970, 1383, 1868
MalI	GATC	6 cut(s)	195, 279, 1037, 1137, 1217, 1895
MboI	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
MfeI	CAATTG	1 cut(s)	765
MflI	RGATCY	2 cut(s)	193, 1215
MhlI	GDGCHC	2 cut(s)	375, 1116
MmeI	TCCRAC	1 cut(s)	301
Mph1103I	ATGCAT	1 cut(s)	238
MroI	TCCGGA	1 cut(s)	91
MseI	TTAA	6 cut(s)	315, 423, 1296, 1500, 1581, 2066
MslI	CAYNNNNRTG	3 cut(s)	780, 912, 1667
MspA1I	CMGCKG	1 cut(s)	841
MspI	CCGG	7 cut(s)	92, 146, 250, 1451, 1823, 1829, 1964
MspR9I	CCNGG	6 cut(s)	251, 1081, 1446, 1485, 1823, 1824
MunI	CAATTG	1 cut(s)	765
Mva1269I	GAATGC	3 cut(s)	368, 1396, 1926
MvaI	CCWGG	3 cut(s)	1081, 1446, 1485
MvnI	CGCG	3 cut(s)	260, 644, 1365
MwoI	GCNNNNNNNGC	8 cut(s)	715, 1298, 1321, 1362, 1376, 1708, 1723, 1771
NciI	CCSGG	3 cut(s)	251, 1823, 1824
NdeI	CATATG	1 cut(s)	1334
NdeII	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
NlaIV	GGNNCC	3 cut(s)	1267, 1439, 1827
NmuCI	GTSAC	1 cut(s)	1383
NsiI	ATGCAT	1 cut(s)	238
NspI	RCATGY	1 cut(s)	1748
PaeI	GCATGC	1 cut(s)	1748
PciSI	GCTCTTC	1 cut(s)	285
PctI	GAATGC	3 cut(s)	368, 1396, 1926
PfeI	GAWTC	2 cut(s)	338, 1177
PflMI	CCANNNNNTGG	2 cut(s)	1080, 1484
PinAI	ACCGGT	1 cut(s)	1828
PshBI	ATTAAT	1 cut(s)	423
Psp6I	CCWGG	3 cut(s)	1079, 1444, 1483
PspEI	GGTNACC	1 cut(s)	1868
PspFI	CCCAGC	2 cut(s)	270, 348
PspGI	CCWGG	3 cut(s)	1079, 1444, 1483
PspN4I	GGNNCC	3 cut(s)	1267, 1439, 1827
PspPI	GGNCC	3 cut(s)	143, 1448, 1826
PstI	CTGCAG	1 cut(s)	1618
PstNI	CAGNNNCTG	1 cut(s)	1649
PsuI	RGATCY	2 cut(s)	193, 1215
RsaI	GTAC	2 cut(s)	1543, 1632
RsaNI	GTAC	2 cut(s)	1542, 1631
RseI	CAYNNNNRTG	3 cut(s)	780, 912, 1667
SapI	GCTCTTC	1 cut(s)	285
SaqAI	TTAA	6 cut(s)	315, 423, 1296, 1500, 1581, 2066
Sau3AI	GATC	6 cut(s)	193, 277, 1035, 1135, 1215, 1893
Sau96I	GGNCC	3 cut(s)	143, 1448, 1826
ScrFI	CCNGG	6 cut(s)	251, 1081, 1446, 1485, 1823, 1824
SduI	GDGCHC	2 cut(s)	375, 1116
SexAI	ACCWGGT	1 cut(s)	1483
SfaNI	GCATC	6 cut(s)	84, 594, 688, 1689, 1761, 1845
SfcI	CTRYAG	1 cut(s)	1614
SinI	GGWCC	3 cut(s)	143, 1448, 1826
SmaI	CCCGGG	1 cut(s)	1824
SmiMI	CAYNNNNRTG	3 cut(s)	780, 912, 1667
SmlI	CTYRAG	3 cut(s)	414, 1219, 1874
SmoI	CTYRAG	3 cut(s)	414, 1219, 1874
SpeI	ACTAGT	1 cut(s)	1187
SphI	GCATGC	1 cut(s)	1748
SspMI	CTAG	4 cut(s)	665, 1188, 1509, 1620
StyD4I	CCNGG	6 cut(s)	249, 1079, 1444, 1483, 1821, 1822
TaaI	ACNGT	5 cut(s)	403, 672, 1528, 1900, 1921
TaiI	ACGT	2 cut(s)	16, 132
TaqI	TCGA	3 cut(s)	204, 792, 900
TauI	GCSGC	4 cut(s)	260, 647, 1365, 1729
TfiI	GAWTC	2 cut(s)	338, 1177
Tru1I	TTAA	6 cut(s)	315, 423, 1296, 1500, 1581, 2066
Tru9I	TTAA	6 cut(s)	315, 423, 1296, 1500, 1581, 2066
TscAI	CASTG	5 cut(s)	175, 1051, 1363, 1558, 1905
TseFI	GTSAC	1 cut(s)	1383
TseI	GCWGC	6 cut(s)	742, 761, 946, 1324, 1367, 1616
Tsp45I	GTSAC	1 cut(s)	1383
TspDTI	ATGAA	5 cut(s)	461, 948, 980, 1878, 2052
TspGWI	ACGGA	1 cut(s)	1587
TspMI	CCCGGG	1 cut(s)	1822
TspRI	CASTG	5 cut(s)	175, 1051, 1363, 1558, 1905
Van91I	CCANNNNNTGG	2 cut(s)	1080, 1484
VpaK11BI	GGWCC	3 cut(s)	143, 1448, 1826
VspI	ATTAAT	1 cut(s)	423
XagI	CCTNNNNNAGG	1 cut(s)	851
XapI	RAATTY	6 cut(s)	149, 200, 214, 1805, 1941, 1952
XceI	RCATGY	1 cut(s)	1748
XmaI	CCCGGG	1 cut(s)	1822
XmiI	GTMKAC	2 cut(s)	801, 1624
XspI	CTAG	4 cut(s)	665, 1188, 1509, 1620
Zsp2I	ATGCAT	1 cut(s)	238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.