Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008238

Physical Location & Seq

Genomic Coordinates Reverse (-)

10070983 .. 10073050

Gene Structure 2068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G010820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGATAAGTTCCATCTCGCCCTTACCAGCTCCTCCTACTTCTGTCACGACACATACAAAGCCTATTGGCATCATCCCTCCTCCTCCAGAAACAGCAAAAATCATCAACAAAACTGCCAAGCACGTTTCCAAGAATGGACCGGAATTTGAGAAGAAGGTCATCACTGAAAAGACTAAACAAAATCCAGATTCAAAATTCGACTTTTTGAATTCCTCACATCCCTACCATGCATATTATCAGCACCGGGTGGCCGCGTTCCTTTCCCAGCCTGATCAGTCTTCTGAAGAGCCAGCTCCAGTTGTAGATGTTAAAGCTGGAACACCAAAGCCTGATTCCCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCCGAACCACCAGAACCCGAAGAGTTTACTGTTCAGCTCCCTCAAGGAATTAGTGGAGAAGAACTGGATGTTATGAAGCTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGAATTGAGAAGCAGAGAGAGTAAAAACCCCCAGTTCTATTTTCTCAATCATAAACATAGCTTGTTCAAGTTTTTTACTTCTCTGGCGGATGTATATTCAAAGGTGTTGATGCCACAAGAAGGGATGACAGAGAAACTGAAGAAGAACGCGGCGGACATGACCATCGTGCTAGAACGGTGTGTGCATCGGCTGGGGTGGGAGCATTATCAAAAGCAGGCAAAGCAGAAGACTGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCCAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCGCTGAGCCTTGAAGAGGTAATTATAAGTAGGAGCAAAGTCGTTATGGAAGCAGATGATAATGTCGAGGAGCATAGGGATGTTGAAATGGATTTGGATGAAGAAGAGATGCAGCTTGTTGAAGAAGGCATGAAAGTAACGGAGGTGGAACAAGCACCAATGAGAATTGTGAACAACTGGAAGAGACCCGAGGAGAGGATGATCCAATCCAGTGCCGAAAGAGACATGACGATTTCCCCCATTACCGGGGAGCTTGTCCCTAACAATGACATGTCTGAGCACATGAGGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCTCAGGACGATGAGATCTCAAGAAACATTGTGAACCTTGCGAGAACCCGTCCTGACATTTTTGGTTCCACAGAGGAGGAAGTTTCCAATGCTGTTAAGGCTGAGATTGGAAAGCAGGAAAAGCAGCAGGTCATATGGGATGGTCATGCTGGAAGCACTGGCCGCGCAGCAAATCAAGCCATGTCACAGAATGCCAATGGAGGTGATAAAACCGATGTTGTGAACAATGAGGCAAGGAACCTTCCTGGTCCGGCGAGACCTTCAGTTCTTCCTCTTCCACCACCTGGTGTTCTTGCCGTTAATCTTCCTAGTGTTCCTGCAAACACAGTTCAGTACGCAGGTACAAATAGCAGTGATTTCCCTGTGCAATTTCCATTGGTTAAGACTACTATGCCTCCGTCAGTGTTTATGTCTGCAGCTAGTATACCTGTACCTCCACCTATATCTGAGTATACAACCATGCAAATGGCTTACATACCTACAAACGCAATGCCGATGCCTCCACCGCCTTTGCTTCATGTGCGGCCACCAACACCTCCGCATGCAGAACCTAAGCCAAAGCGACAGAAGCTTGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCACCCGGGACCGGTCGGTAACCTCAAGGGACAACTTTTGGAGATCACAGTGCATTCTTTATCTGAAACTGTTGGCAACAATTTGTCCCTTGCATATTACAATGTAGGCGCAGGACAAACACTTGCTCTTTCAATAAGAGAGCGCGGTGGTAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

657

Amino Acids

73.43

Weight (kDa)

5.43

Isoelectric Point (pI)

55.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	33 - 86	1e-17	Surp module
Surp	PF01805	144 - 193	3.3e-17	Surp module
PRP21_like_P	PF12230	214 - 414	3.1e-46	Pre-mRNA splicing factor PRP21 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27600
rosa_chinensis	RchiOBHm_Chr1g0364581 RchiOBHm_Chr1g0364591 RchiOBHm_Chr7g0192451 RchiOBHm_Chr7g0192471
rosa_laevigata	RLG00000004366
rosa_multiflora	Rmu_co8010994.1_g000001 Rmu_co8391555.1_g000001 Rmu_sc0003108.1_g000026 Rmu_sc0010788.1_g000002 Rmu_ssc0000278.1_g000009
rosa_rugosa	Rorug01G0316300 Rorug07G0001600
rosa_samantha	Rh1AG145600 Rh1AG326100 Rh1CG128300 Rh7AG125600 Rh7BG127900
rosa_wichuraiana	Rw1G011260 Rw1G028830 Rw1G028890 Rw7G010130 Rw7G010820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
Acc36I	ACCTGC	2 cut(s)	1315, 1526
AccB7I	CCANNNNNTGG	1 cut(s)	1481
AccI	GTMKAC	2 cut(s)	1621, 1649
AccII	CGCG	4 cut(s)	254, 638, 1362, 1956
AclWI	GGATC	2 cut(s)	1027, 1127
AcoI	YGGCCR	3 cut(s)	249, 1357, 1721
AcsI	RAATTY	4 cut(s)	143, 194, 208, 1799
AcuI	CTGAAG	4 cut(s)	303, 647, 741, 1443
AdeI	CACNNNGTG	2 cut(s)	247, 1484
AfaI	GTAC	3 cut(s)	1532, 1540, 1629
AfiI	CCNNNNNNNGG	7 cut(s)	608, 847, 1026, 1076, 1077, 1481, 1822
AflIII	ACRYGT	1 cut(s)	1101
AgeI	ACCGGT	1 cut(s)	1822
AgsI	TTSAA	9 cut(s)	192, 208, 556, 588, 845, 917, 953, 1779, 1944
AhlI	ACTAGT	1 cut(s)	1184
AjnI	CCWGG	2 cut(s)	1441, 1480
AjuI	GAANNNNNNNTTGG	2 cut(s)	316, 348
Alw21I	GWGCWC	1 cut(s)	1113
Alw26I	GTCTC	4 cut(s)	1009, 1047, 1175, 1447
AlwI	GGATC	2 cut(s)	1027, 1127
Ama87I	CYCGRG	2 cut(s)	1019, 1816
AoxI	GGCC	3 cut(s)	249, 1357, 1721
ApeKI	GCWGC	5 cut(s)	755, 943, 1321, 1364, 1613
ApoI	RAATTY	4 cut(s)	143, 194, 208, 1799
AsiGI	ACCGGT	1 cut(s)	1822
AspLEI	GCGC	3 cut(s)	1364, 1922, 1956
AspS9I	GGNCC	4 cut(s)	137, 784, 1445, 1820
AsuC2I	CCSGG	4 cut(s)	245, 1078, 1817, 1818
AsuHPI	GGTGA	1 cut(s)	1412
AvaI	CYCGRG	2 cut(s)	1019, 1816
AvaII	GGWCC	4 cut(s)	137, 784, 1445, 1820
BaeGI	GKGCMC	1 cut(s)	369
BbsI	GAAGAC	2 cut(s)	270, 722
Bbv12I	GWGCWC	1 cut(s)	1113
BbvI	GCAGC	5 cut(s)	742, 955, 1333, 1376, 1625
BccI	CCATC	3 cut(s)	20, 659, 1331
BceAI	ACGGC	1 cut(s)	1478
BciT130I	CCWGG	2 cut(s)	1443, 1482
BclI	TGATCA	1 cut(s)	271
BcnI	CCSGG	4 cut(s)	245, 1078, 1817, 1818
BcoDI	GTCTC	4 cut(s)	1009, 1047, 1175, 1447
BcuI	ACTAGT	1 cut(s)	1184
BfaI	CTAG	4 cut(s)	659, 1185, 1506, 1617
BfmI	CTRYAG	1 cut(s)	1611
BfuAI	ACCTGC	2 cut(s)	1315, 1526
BglII	AGATCT	1 cut(s)	1212
BisI	GCNGC	9 cut(s)	252, 639, 756, 944, 1322, 1360, 1365, 1614, 1721
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	9 cut(s)	253, 640, 757, 945, 1323, 1361, 1366, 1615, 1722
Bme1390I	CCNGG	6 cut(s)	245, 1078, 1443, 1482, 1817, 1818
Bme18I	GGWCC	4 cut(s)	137, 784, 1445, 1820
BmeT110I	CYCGRG	2 cut(s)	1019, 1816
BmgT120I	GGNCC	4 cut(s)	137, 784, 1445, 1820
BmiI	GGNNCC	3 cut(s)	1264, 1436, 1821
BmrFI	CCNGG	6 cut(s)	245, 1078, 1443, 1482, 1817, 1818
BmrI	ACTGGG	2 cut(s)	448, 514
BmsI	GCATC	5 cut(s)	78, 588, 682, 930, 1683
BmuI	ACTGGG	2 cut(s)	448, 514
BpiI	GAAGAC	2 cut(s)	270, 722
BpmI	CTGGAG	2 cut(s)	69, 279
Bpu10I	CCTNAGC	2 cut(s)	1200, 1749
Bpu1102I	GCTNAGC	1 cut(s)	836
BpuEI	CTTGAG	3 cut(s)	393, 1201, 1820
BpuMI	CCSGG	4 cut(s)	245, 1078, 1817, 1818
BsaI	GGTCTC	2 cut(s)	1009, 1447
BsaJI	CCNNGG	3 cut(s)	1020, 1077, 1816
BsaWI	WCCGGW	2 cut(s)	139, 1822
BsaXI	ACNNNNNCTCC	2 cut(s)	1576, 1606
Bsc4I	CCNNNNNNNGG	7 cut(s)	608, 847, 1026, 1076, 1077, 1481, 1822
Bse118I	RCCGGY	1 cut(s)	1822
Bse1I	ACTGG	7 cut(s)	296, 435, 454, 520, 1013, 1041, 1360
Bse3DI	GCAATG	1 cut(s)	1692
BseBI	CCWGG	2 cut(s)	1443, 1482
BseDI	CCNNGG	3 cut(s)	1020, 1077, 1816
BseLI	CCNNNNNNNGG	7 cut(s)	608, 847, 1026, 1076, 1077, 1481, 1822
BseMI	GCAATG	1 cut(s)	1692
BseMII	CTCAG	5 cut(s)	827, 1098, 1214, 1290, 1635
BseNI	ACTGG	7 cut(s)	296, 435, 454, 520, 1013, 1041, 1360
BseRI	GAGGAG	7 cut(s)	21, 69, 72, 819, 914, 1037, 1286
BseSI	GKGCMC	1 cut(s)	369
BseXI	GCAGC	5 cut(s)	742, 955, 1333, 1376, 1625
BseYI	CCCAGC	3 cut(s)	264, 342, 679
Bsh1236I	CGCG	4 cut(s)	254, 638, 1362, 1956
Bsh1285I	CGRYCG	1 cut(s)	1827
BshFI	GGCC	3 cut(s)	251, 1359, 1723
BshTI	ACCGGT	1 cut(s)	1822
BsiEI	CGRYCG	1 cut(s)	1827
BsiHKAI	GWGCWC	1 cut(s)	1113
BsiHKCI	CYCGRG	2 cut(s)	1019, 1816
BsiSI	CCGG	6 cut(s)	140, 244, 1077, 1448, 1817, 1823
BslFI	GGGAC	4 cut(s)	1073, 1833, 1854, 1882
BslI	CCNNNNNNNGG	7 cut(s)	608, 847, 1026, 1076, 1077, 1481, 1822
BsmAI	GTCTC	4 cut(s)	1009, 1047, 1175, 1447
BsmFI	GGGAC	4 cut(s)	1073, 1833, 1854, 1882
BsmI	GAATGC	3 cut(s)	362, 1393, 1864
BsnI	GGCC	3 cut(s)	251, 1359, 1723
Bso31I	GGTCTC	2 cut(s)	1009, 1447
BsoBI	CYCGRG	2 cut(s)	1019, 1816
Bsp1286I	GDGCHC	2 cut(s)	369, 1113
Bsp143I	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
Bsp1720I	GCTNAGC	1 cut(s)	836
BspANI	GGCC	3 cut(s)	251, 1359, 1723
BspCNI	CTCAG	5 cut(s)	828, 1099, 1213, 1291, 1636
BspFNI	CGCG	4 cut(s)	254, 638, 1362, 1956
BspLI	GGNNCC	3 cut(s)	1264, 1436, 1821
BspMAI	CTGCAG	1 cut(s)	1615
BspMI	ACCTGC	2 cut(s)	1315, 1526
BspPI	GGATC	2 cut(s)	1027, 1127
BspQI	GCTCTTC	1 cut(s)	279
BspTNI	GGTCTC	2 cut(s)	1009, 1447
BsrDI	GCAATG	1 cut(s)	1692
BsrFI	RCCGGY	1 cut(s)	1822
BsrI	ACTGG	7 cut(s)	296, 435, 454, 520, 1013, 1041, 1360
BssAI	RCCGGY	1 cut(s)	1822
BssECI	CCNNGG	3 cut(s)	1020, 1077, 1816
BssMI	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
BssNAI	GTATAC	2 cut(s)	1622, 1650
Bst1107I	GTATAC	2 cut(s)	1622, 1650
Bst2UI	CCWGG	2 cut(s)	1443, 1482
Bst4CI	ACNGT	5 cut(s)	397, 666, 1525, 1861, 1882
Bst6I	CTCTTC	6 cut(s)	279, 381, 840, 930, 1007, 1476
BstC8I	GCNNGC	3 cut(s)	291, 705, 1740
BstDEI	CTNAG	8 cut(s)	347, 836, 1107, 1170, 1200, 1299, 1644, 1749
BstEII	GGTNACC	1 cut(s)	1829
BstENI	CCTNNNNNAGG	1 cut(s)	845
BstFNI	CGCG	4 cut(s)	254, 638, 1362, 1956
BstHHI	GCGC	3 cut(s)	1364, 1922, 1956
BstKTI	GATC	5 cut(s)	274, 1035, 1135, 1215, 1857
BstMAI	GTCTC	4 cut(s)	1009, 1047, 1175, 1447
BstMBI	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
BstMCI	CGRYCG	1 cut(s)	1827
BstMWI	GCNNNNNNNGC	8 cut(s)	709, 1295, 1318, 1359, 1373, 1702, 1717, 1765
BstNI	CCWGG	2 cut(s)	1443, 1482
BstNSI	RCATGY	2 cut(s)	1105, 1742
BstPI	GGTNACC	1 cut(s)	1829
BstSCI	CCNGG	6 cut(s)	243, 1076, 1441, 1480, 1815, 1816
BstSFI	CTRYAG	1 cut(s)	1611
BstSLI	GKGCMC	1 cut(s)	369
BstUI	CGCG	4 cut(s)	254, 638, 1362, 1956
BstV1I	GCAGC	5 cut(s)	742, 955, 1333, 1376, 1625
BstV2I	GAAGAC	2 cut(s)	270, 722
BstX2I	RGATCY	1 cut(s)	1212
BstXI	CCANNNNNNTGG	1 cut(s)	1663
BstYI	RGATCY	1 cut(s)	1212
BstZ17I	GTATAC	2 cut(s)	1622, 1650
BsuRI	GGCC	3 cut(s)	251, 1359, 1723
BtsI	GCAGTG	1 cut(s)	1555
BtsIMutI	CAGTG	6 cut(s)	162, 1048, 1353, 1555, 1605, 1866
BveI	ACCTGC	2 cut(s)	1315, 1526
Cac8I	GCNNGC	3 cut(s)	291, 705, 1740
CfoI	GCGC	3 cut(s)	1364, 1922, 1956
Cfr10I	RCCGGY	1 cut(s)	1822
Cfr13I	GGNCC	4 cut(s)	137, 784, 1445, 1820
Cfr9I	CCCGGG	1 cut(s)	1816
CsiI	ACCWGGT	1 cut(s)	1480
Csp6I	GTAC	3 cut(s)	1531, 1539, 1628
CspAI	ACCGGT	1 cut(s)	1822
CspCI	CAANNNNNGTGG	2 cut(s)	1689, 1724
CviQI	GTAC	3 cut(s)	1531, 1539, 1628
DdeI	CTNAG	8 cut(s)	347, 836, 1107, 1170, 1200, 1299, 1644, 1749
DpnI	GATC	5 cut(s)	273, 1034, 1134, 1214, 1856
DpnII	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
DraIII	CACNNNGTG	2 cut(s)	247, 1484
EaeI	YGGCCR	3 cut(s)	249, 1357, 1721
Eam1104I	CTCTTC	6 cut(s)	279, 381, 840, 930, 1007, 1476
EarI	CTCTTC	6 cut(s)	279, 381, 840, 930, 1007, 1476
EciI	GGCGGA	2 cut(s)	590, 656
Eco31I	GGTCTC	2 cut(s)	1009, 1447
Eco47I	GGWCC	4 cut(s)	137, 784, 1445, 1820
Eco57I	CTGAAG	4 cut(s)	303, 647, 741, 1443
Eco88I	CYCGRG	2 cut(s)	1019, 1816
Eco91I	GGTNACC	1 cut(s)	1829
EcoNI	CCTNNNNNAGG	1 cut(s)	845
EcoO65I	GGTNACC	1 cut(s)	1829
EcoRI	GAATTC	1 cut(s)	208
EcoRII	CCWGG	2 cut(s)	1441, 1480
EcoT22I	ATGCAT	1 cut(s)	232
FaqI	GGGAC	4 cut(s)	1073, 1833, 1854, 1882
FauNDI	CATATG	1 cut(s)	1331
FbaI	TGATCA	1 cut(s)	271
FblI	GTMKAC	2 cut(s)	1621, 1649
Fnu4HI	GCNGC	9 cut(s)	252, 639, 756, 944, 1322, 1360, 1365, 1614, 1721
Fsp4HI	GCNGC	9 cut(s)	252, 639, 756, 944, 1322, 1360, 1365, 1614, 1721
FspBI	CTAG	4 cut(s)	659, 1185, 1506, 1617
GlaI	GCGC	3 cut(s)	1363, 1921, 1955
GluI	GCNGC	9 cut(s)	252, 639, 756, 944, 1322, 1360, 1365, 1614, 1721
GsaI	CCCAGC	3 cut(s)	268, 346, 683
GsuI	CTGGAG	2 cut(s)	69, 279
HaeIII	GGCC	3 cut(s)	251, 1359, 1723
HapII	CCGG	6 cut(s)	140, 244, 1077, 1448, 1817, 1823
HhaI	GCGC	3 cut(s)	1364, 1922, 1956
Hin6I	GCGC	3 cut(s)	1362, 1920, 1954
HinP1I	GCGC	3 cut(s)	1362, 1920, 1954
HindIII	AAGCTT	1 cut(s)	1766
HinfI	GANTC	4 cut(s)	188, 332, 1174, 1775
HpaII	CCGG	6 cut(s)	140, 244, 1077, 1448, 1817, 1823
HphI	GGTGA	1 cut(s)	1412
Hpy166II	GTNNAC	6 cut(s)	393, 1003, 1231, 1420, 1622, 1650
Hpy188I	TCNGA	5 cut(s)	283, 468, 1108, 1645, 1876
Hpy188III	TCNNGA	8 cut(s)	46, 86, 185, 1178, 1202, 1218, 1250, 1790
Hpy8I	GTNNAC	6 cut(s)	393, 1003, 1231, 1420, 1622, 1650
HpyAV	CCTTC	5 cut(s)	148, 602, 950, 1448, 1467
HpyCH4III	ACNGT	5 cut(s)	397, 666, 1525, 1861, 1882
HpyCH4IV	ACGT	1 cut(s)	123
HpyF10VI	GCNNNNNNNGC	8 cut(s)	709, 1295, 1318, 1359, 1373, 1702, 1717, 1765
HpyF3I	CTNAG	8 cut(s)	347, 836, 1107, 1170, 1200, 1299, 1644, 1749
HpySE526I	ACGT	1 cut(s)	123
HspAI	GCGC	3 cut(s)	1362, 1920, 1954
Ksp22I	TGATCA	1 cut(s)	271
Kzo9I	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
LguI	GCTCTTC	1 cut(s)	279
LmnI	GCTCC	7 cut(s)	34, 298, 408, 688, 864, 901, 1081
Lsp1109I	GCAGC	5 cut(s)	742, 955, 1333, 1376, 1625
LweI	GCATC	5 cut(s)	78, 588, 682, 930, 1683
MabI	ACCWGGT	1 cut(s)	1480
MaeI	CTAG	4 cut(s)	659, 1185, 1506, 1617
MaeII	ACGT	1 cut(s)	123
MaeIII	GTNAC	5 cut(s)	43, 744, 967, 1380, 1829
MalI	GATC	5 cut(s)	273, 1034, 1134, 1214, 1856
MboI	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
MfeI	CAATTG	1 cut(s)	759
MflI	RGATCY	1 cut(s)	1212
MhlI	GDGCHC	2 cut(s)	369, 1113
Mph1103I	ATGCAT	1 cut(s)	232
MseI	TTAA	4 cut(s)	309, 1293, 1497, 1578
MslI	CAYNNNNRTG	3 cut(s)	774, 909, 1661
MspA1I	CMGCKG	1 cut(s)	835
MspI	CCGG	6 cut(s)	140, 244, 1077, 1448, 1817, 1823
MspR9I	CCNGG	6 cut(s)	245, 1078, 1443, 1482, 1817, 1818
MunI	CAATTG	1 cut(s)	759
Mva1269I	GAATGC	3 cut(s)	362, 1393, 1864
MvaI	CCWGG	2 cut(s)	1443, 1482
MvnI	CGCG	4 cut(s)	254, 638, 1362, 1956
MwoI	GCNNNNNNNGC	8 cut(s)	709, 1295, 1318, 1359, 1373, 1702, 1717, 1765
NciI	CCSGG	4 cut(s)	245, 1078, 1817, 1818
NdeI	CATATG	1 cut(s)	1331
NdeII	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
NlaIV	GGNNCC	3 cut(s)	1264, 1436, 1821
NmuCI	GTSAC	2 cut(s)	43, 1380
NsiI	ATGCAT	1 cut(s)	232
NspI	RCATGY	2 cut(s)	1105, 1742
PaeI	GCATGC	1 cut(s)	1742
PciI	ACATGT	1 cut(s)	1101
PciSI	GCTCTTC	1 cut(s)	279
PctI	GAATGC	3 cut(s)	362, 1393, 1864
PfeI	GAWTC	4 cut(s)	188, 332, 1174, 1775
PflMI	CCANNNNNTGG	1 cut(s)	1481
PinAI	ACCGGT	1 cut(s)	1822
PkrI	GCNGC	9 cut(s)	253, 640, 757, 945, 1323, 1361, 1366, 1615, 1722
PscI	ACATGT	1 cut(s)	1101
PsiI	TTATAA	1 cut(s)	857
Psp6I	CCWGG	2 cut(s)	1441, 1480
PspEI	GGTNACC	1 cut(s)	1829
PspFI	CCCAGC	3 cut(s)	264, 342, 679
PspGI	CCWGG	2 cut(s)	1441, 1480
PspN4I	GGNNCC	3 cut(s)	1264, 1436, 1821
PspPI	GGNCC	4 cut(s)	137, 784, 1445, 1820
PstI	CTGCAG	1 cut(s)	1615
PsuI	RGATCY	1 cut(s)	1212
RsaI	GTAC	3 cut(s)	1532, 1540, 1629
RsaNI	GTAC	3 cut(s)	1531, 1539, 1628
RseI	CAYNNNNRTG	3 cut(s)	774, 909, 1661
SapI	GCTCTTC	1 cut(s)	279
SaqAI	TTAA	4 cut(s)	309, 1293, 1497, 1578
SatI	GCNGC	9 cut(s)	252, 639, 756, 944, 1322, 1360, 1365, 1614, 1721
Sau3AI	GATC	5 cut(s)	271, 1032, 1132, 1212, 1854
Sau96I	GGNCC	4 cut(s)	137, 784, 1445, 1820
ScrFI	CCNGG	6 cut(s)	245, 1078, 1443, 1482, 1817, 1818
SduI	GDGCHC	2 cut(s)	369, 1113
SexAI	ACCWGGT	1 cut(s)	1480
SfaNI	GCATC	5 cut(s)	78, 588, 682, 930, 1683
SfcI	CTRYAG	1 cut(s)	1611
SinI	GGWCC	4 cut(s)	137, 784, 1445, 1820
SmaI	CCCGGG	1 cut(s)	1818
SmiMI	CAYNNNNRTG	3 cut(s)	774, 909, 1661
SmlI	CTYRAG	3 cut(s)	408, 1216, 1835
SmoI	CTYRAG	3 cut(s)	408, 1216, 1835
SpeI	ACTAGT	1 cut(s)	1184
SphI	GCATGC	1 cut(s)	1742
SspMI	CTAG	4 cut(s)	659, 1185, 1506, 1617
StyD4I	CCNGG	6 cut(s)	243, 1076, 1441, 1480, 1815, 1816
TaaI	ACNGT	5 cut(s)	397, 666, 1525, 1861, 1882
TaiI	ACGT	1 cut(s)	126
TaqI	TCGA	2 cut(s)	198, 897
TauI	GCSGC	4 cut(s)	254, 641, 1362, 1723
TfiI	GAWTC	4 cut(s)	188, 332, 1174, 1775
Tru1I	TTAA	4 cut(s)	309, 1293, 1497, 1578
Tru9I	TTAA	4 cut(s)	309, 1293, 1497, 1578
TscAI	CASTG	6 cut(s)	169, 1048, 1360, 1555, 1605, 1866
TseFI	GTSAC	2 cut(s)	43, 1380
TseI	GCWGC	5 cut(s)	755, 943, 1321, 1364, 1613
Tsp45I	GTSAC	2 cut(s)	43, 1380
TspDTI	ATGAA	4 cut(s)	455, 945, 977, 1703
TspGWI	ACGGA	2 cut(s)	986, 1584
TspMI	CCCGGG	1 cut(s)	1816
TspRI	CASTG	6 cut(s)	169, 1048, 1360, 1555, 1605, 1866
Van91I	CCANNNNNTGG	1 cut(s)	1481
VpaK11BI	GGWCC	4 cut(s)	137, 784, 1445, 1820
XagI	CCTNNNNNAGG	1 cut(s)	845
XapI	RAATTY	4 cut(s)	143, 194, 208, 1799
XceI	RCATGY	2 cut(s)	1105, 1742
XmaI	CCCGGG	1 cut(s)	1816
XmiI	GTMKAC	2 cut(s)	1621, 1649
XspI	CTAG	4 cut(s)	659, 1185, 1506, 1617
Zsp2I	ATGCAT	1 cut(s)	232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.