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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1197000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0141241 RchiOBHm_Chr2g0145471 RchiOBHm_Chr7g0193751 |
| rosa_laevigata | RLG00000000961 RLG00000008242 RLG00000008722 RLG00000023244 RLG00000032752 |
| rosa_multiflora | Rmu_sc0008822.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00041370 |
| rosa_rugosa | Rorug05G0037800 Rorug05G0037900 |
| rosa_samantha | Rh1AG207800 Rh1BG186000 Rh1DG215600 Rh2BG456500 Rh4BG096200 Rh5BG071900 Rh6AG004600 |
| rosa_wichuraiana | Rw3G028510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 165 |
| AgsI | TTSAA | 3 cut(s) | 65, 97, 234 |
| AluBI | AGCT | 1 cut(s) | 151 |
| AluI | AGCT | 1 cut(s) | 151 |
| AoxI | GGCC | 1 cut(s) | 330 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 68, 100 |
| AspLEI | GCGC | 1 cut(s) | 127 |
| AspS9I | GGNCC | 1 cut(s) | 331 |
| AsuHPI | GGTGA | 1 cut(s) | 404 |
| BbsI | GAAGAC | 1 cut(s) | 290 |
| BccI | CCATC | 1 cut(s) | 395 |
| BfaI | CTAG | 2 cut(s) | 347, 378 |
| BfmI | CTRYAG | 1 cut(s) | 210 |
| BmgT120I | GGNCC | 1 cut(s) | 331 |
| BmrI | ACTGGG | 1 cut(s) | 201 |
| BmsI | GCATC | 1 cut(s) | 214 |
| BmuI | ACTGGG | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 290 |
| Bsa29I | ATCGAT | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| Bse1I | ACTGG | 1 cut(s) | 196 |
| BseCI | ATCGAT | 1 cut(s) | 115 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseGI | GGATG | 2 cut(s) | 229, 247 |
| BseMII | CTCAG | 1 cut(s) | 12 |
| BseNI | ACTGG | 1 cut(s) | 196 |
| BseYI | CCCAGC | 2 cut(s) | 44, 320 |
| BshFI | GGCC | 1 cut(s) | 332 |
| BshVI | ATCGAT | 1 cut(s) | 115 |
| BsnI | GGCC | 1 cut(s) | 332 |
| Bsp143I | GATC | 2 cut(s) | 136, 244 |
| BspANI | GGCC | 1 cut(s) | 332 |
| BspCNI | CTCAG | 1 cut(s) | 13 |
| BspDI | ATCGAT | 1 cut(s) | 115 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BsrI | ACTGG | 1 cut(s) | 196 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| BssMI | GATC | 2 cut(s) | 136, 244 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstF5I | GGATG | 2 cut(s) | 229, 247 |
| BstHHI | GCGC | 1 cut(s) | 127 |
| BstKTI | GATC | 2 cut(s) | 139, 247 |
| BstMBI | GATC | 2 cut(s) | 136, 244 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 157, 338, 371 |
| BstSFI | CTRYAG | 1 cut(s) | 210 |
| BstV2I | GAAGAC | 1 cut(s) | 290 |
| Bsu15I | ATCGAT | 1 cut(s) | 115 |
| BsuRI | GGCC | 1 cut(s) | 332 |
| BsuTUI | ATCGAT | 1 cut(s) | 115 |
| BtsCI | GGATG | 2 cut(s) | 229, 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 189 |
| CfoI | GCGC | 1 cut(s) | 127 |
| Cfr13I | GGNCC | 1 cut(s) | 331 |
| ClaI | ATCGAT | 1 cut(s) | 115 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviJI | RGCY | 5 cut(s) | 10, 151, 170, 320, 332 |
| CviKI_1 | RGCY | 5 cut(s) | 10, 151, 170, 320, 332 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| DpnI | GATC | 2 cut(s) | 138, 246 |
| DpnII | GATC | 2 cut(s) | 136, 244 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| FaiI | YATR | 4 cut(s) | 30, 157, 258, 263 |
| FokI | GGATG | 2 cut(s) | 236, 254 |
| FspBI | CTAG | 2 cut(s) | 347, 378 |
| GlaI | GCGC | 1 cut(s) | 126 |
| GsaI | CCCAGC | 2 cut(s) | 48, 324 |
| HaeIII | GGCC | 1 cut(s) | 332 |
| HhaI | GCGC | 1 cut(s) | 127 |
| Hin6I | GCGC | 1 cut(s) | 125 |
| HinP1I | GCGC | 1 cut(s) | 125 |
| HinfI | GANTC | 3 cut(s) | 104, 265, 395 |
| HphI | GGTGA | 1 cut(s) | 404 |
| Hpy188I | TCNGA | 3 cut(s) | 109, 199, 400 |
| Hpy188III | TCNNGA | 1 cut(s) | 269 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 157, 338, 371 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| HspAI | GCGC | 1 cut(s) | 125 |
| Kzo9I | GATC | 2 cut(s) | 136, 244 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LpnPI | CCDG | 6 cut(s) | 30, 177, 237, 254, 306, 356 |
| LweI | GCATC | 1 cut(s) | 214 |
| MaeI | CTAG | 2 cut(s) | 347, 378 |
| MaeIII | GTNAC | 1 cut(s) | 187 |
| MalI | GATC | 2 cut(s) | 138, 246 |
| MboI | GATC | 2 cut(s) | 136, 244 |
| MboII | GAAGA | 2 cut(s) | 158, 295 |
| MfeI | CAATTG | 1 cut(s) | 291 |
| MluCI | AATT | 2 cut(s) | 65, 291 |
| MlyI | GAGTC | 1 cut(s) | 274 |
| MnlI | CCTC | 4 cut(s) | 178, 343, 344, 355 |
| MseI | TTAA | 1 cut(s) | 412 |
| MunI | CAATTG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 157, 338, 371 |
| NdeII | GATC | 2 cut(s) | 136, 244 |
| NmuCI | GTSAC | 1 cut(s) | 187 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PfeI | GAWTC | 2 cut(s) | 104, 395 |
| PleI | GAGTC | 1 cut(s) | 273 |
| PpsI | GAGTC | 1 cut(s) | 273 |
| PspFI | CCCAGC | 2 cut(s) | 44, 320 |
| PspPI | GGNCC | 1 cut(s) | 331 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 1 cut(s) | 412 |
| Sau3AI | GATC | 2 cut(s) | 136, 244 |
| Sau96I | GGNCC | 1 cut(s) | 331 |
| SchI | GAGTC | 1 cut(s) | 274 |
| SetI | ASST | 3 cut(s) | 153, 189, 312 |
| SfaNI | GCATC | 1 cut(s) | 214 |
| SfcI | CTRYAG | 1 cut(s) | 210 |
| Sse9I | AATT | 2 cut(s) | 65, 291 |
| SspMI | CTAG | 2 cut(s) | 347, 378 |
| TaqI | TCGA | 2 cut(s) | 115, 139 |
| TasI | AATT | 2 cut(s) | 65, 291 |
| TatI | WGTACW | 1 cut(s) | 163 |
| TfiI | GAWTC | 2 cut(s) | 104, 395 |
| Tru1I | TTAA | 1 cut(s) | 412 |
| Tru9I | TTAA | 1 cut(s) | 412 |
| TscAI | CASTG | 1 cut(s) | 196 |
| TseFI | GTSAC | 1 cut(s) | 187 |
| Tsp45I | GTSAC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 1 cut(s) | 296 |
| TspRI | CASTG | 1 cut(s) | 196 |
| XspI | CTAG | 2 cut(s) | 347, 378 |