ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1197000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0141241 RchiOBHm_Chr2g0145471 RchiOBHm_Chr7g0193751 |
| rosa_laevigata | RLG00000000961 RLG00000008242 RLG00000008722 RLG00000023244 RLG00000032752 |
| rosa_multiflora | Rmu_sc0008822.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00041370 |
| rosa_rugosa | Rorug05G0037800 Rorug05G0037900 |
| rosa_samantha | Rh1AG207800 Rh1BG186000 Rh1DG215600 Rh2BG456500 Rh4BG096200 Rh5BG071900 Rh6AG004600 |
| rosa_wichuraiana | Rw3G028510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 239 |
| AcsI | RAATTY | 1 cut(s) | 424 |
| AcuI | CTGAAG | 1 cut(s) | 345 |
| AdeI | CACNNNGTG | 1 cut(s) | 49 |
| AfaI | GTAC | 1 cut(s) | 551 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 520 |
| AflIII | ACRYGT | 2 cut(s) | 237, 347 |
| AgsI | TTSAA | 3 cut(s) | 176, 214, 430 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 171, 203 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 387, 419 |
| AoxI | GGCC | 2 cut(s) | 69, 192 |
| ApoI | RAATTY | 1 cut(s) | 424 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 486 |
| AspS9I | GGNCC | 3 cut(s) | 70, 192, 508 |
| AsuHPI | GGTGA | 3 cut(s) | 143, 275, 395 |
| AvaII | GGWCC | 1 cut(s) | 508 |
| BbsI | GAAGAC | 1 cut(s) | 210 |
| BccI | CCATC | 1 cut(s) | 413 |
| BclI | TGATCA | 1 cut(s) | 297 |
| BfaI | CTAG | 6 cut(s) | 8, 86, 117, 413, 525, 561 |
| BmcAI | AGTACT | 1 cut(s) | 551 |
| Bme18I | GGWCC | 1 cut(s) | 508 |
| BmgT120I | GGNCC | 3 cut(s) | 70, 192, 508 |
| BmiI | GGNNCC | 1 cut(s) | 193 |
| BpiI | GAAGAC | 1 cut(s) | 210 |
| BpmI | CTGGAG | 1 cut(s) | 320 |
| BpuEI | CTTGAG | 1 cut(s) | 488 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 520 |
| Bse118I | RCCGGY | 1 cut(s) | 267 |
| BseGI | GGATG | 3 cut(s) | 166, 460, 484 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 520 |
| BseMII | CTCAG | 2 cut(s) | 24, 522 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| Bsh1236I | CGCG | 1 cut(s) | 239 |
| BshFI | GGCC | 2 cut(s) | 71, 194 |
| BsiSI | CCGG | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 520 |
| BsnI | GGCC | 2 cut(s) | 71, 194 |
| Bsp143I | GATC | 1 cut(s) | 297 |
| BspANI | GGCC | 2 cut(s) | 71, 194 |
| BspCNI | CTCAG | 2 cut(s) | 25, 523 |
| BspFNI | CGCG | 1 cut(s) | 239 |
| BspLI | GGNNCC | 1 cut(s) | 193 |
| BsrFI | RCCGGY | 1 cut(s) | 267 |
| BssAI | RCCGGY | 1 cut(s) | 267 |
| BssMI | GATC | 1 cut(s) | 297 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 2 cut(s) | 33, 531 |
| BstF5I | GGATG | 3 cut(s) | 166, 460, 484 |
| BstFNI | CGCG | 1 cut(s) | 239 |
| BstKTI | GATC | 1 cut(s) | 300 |
| BstMBI | GATC | 1 cut(s) | 297 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 110 |
| BstUI | CGCG | 1 cut(s) | 239 |
| BstV2I | GAAGAC | 1 cut(s) | 210 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 202 |
| BsuRI | GGCC | 2 cut(s) | 71, 194 |
| BtsCI | GGATG | 3 cut(s) | 166, 460, 484 |
| Cfr10I | RCCGGY | 1 cut(s) | 267 |
| Cfr13I | GGNCC | 3 cut(s) | 70, 192, 508 |
| CseI | GACGC | 1 cut(s) | 245 |
| Csp6I | GTAC | 1 cut(s) | 550 |
| CviAII | CATG | 1 cut(s) | 443 |
| CviJI | RGCY | 5 cut(s) | 59, 71, 194, 210, 524 |
| CviKI_1 | RGCY | 5 cut(s) | 59, 71, 194, 210, 524 |
| CviQI | GTAC | 1 cut(s) | 550 |
| DdeI | CTNAG | 2 cut(s) | 33, 531 |
| DpnI | GATC | 1 cut(s) | 299 |
| DpnII | GATC | 1 cut(s) | 297 |
| DraIII | CACNNNGTG | 1 cut(s) | 49 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco47I | GGWCC | 1 cut(s) | 508 |
| Eco57I | CTGAAG | 1 cut(s) | 345 |
| EcoO109I | RGGNCCY | 1 cut(s) | 508 |
| FaeI | CATG | 1 cut(s) | 446 |
| FaiI | YATR | 4 cut(s) | 327, 399, 437, 444 |
| FatI | CATG | 1 cut(s) | 442 |
| FbaI | TGATCA | 1 cut(s) | 297 |
| FokI | GGATG | 3 cut(s) | 173, 467, 491 |
| FspBI | CTAG | 6 cut(s) | 8, 86, 117, 413, 525, 561 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| GsuI | CTGGAG | 1 cut(s) | 320 |
| HaeIII | GGCC | 2 cut(s) | 71, 194 |
| HapII | CCGG | 1 cut(s) | 268 |
| HgaI | GACGC | 1 cut(s) | 245 |
| Hin1II | CATG | 1 cut(s) | 446 |
| HinfI | GANTC | 6 cut(s) | 4, 134, 386, 460, 539, 564 |
| HpaII | CCGG | 1 cut(s) | 268 |
| HphI | GGTGA | 3 cut(s) | 143, 275, 395 |
| Hpy188I | TCNGA | 4 cut(s) | 139, 364, 544, 569 |
| Hpy188III | TCNNGA | 4 cut(s) | 176, 305, 337, 464 |
| HpyAV | CCTTC | 2 cut(s) | 524, 528 |
| HpyCH4IV | ACGT | 1 cut(s) | 347 |
| HpyCH4V | TGCA | 1 cut(s) | 555 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 2 cut(s) | 33, 531 |
| HpySE526I | ACGT | 1 cut(s) | 347 |
| Hsp92II | CATG | 1 cut(s) | 446 |
| Ksp22I | TGATCA | 1 cut(s) | 297 |
| Kzo9I | GATC | 1 cut(s) | 297 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| LpnPI | CCDG | 5 cut(s) | 45, 95, 281, 290, 350 |
| MaeI | CTAG | 6 cut(s) | 8, 86, 117, 413, 525, 561 |
| MaeII | ACGT | 1 cut(s) | 347 |
| MalI | GATC | 1 cut(s) | 299 |
| MboI | GATC | 1 cut(s) | 297 |
| MboII | GAAGA | 6 cut(s) | 164, 167, 191, 194, 210, 494 |
| MluCI | AATT | 3 cut(s) | 186, 196, 424 |
| MluI | ACGCGT | 1 cut(s) | 237 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 1 cut(s) | 373 |
| MroXI | GAANNNNTTC | 1 cut(s) | 486 |
| MspI | CCGG | 1 cut(s) | 268 |
| MvnI | CGCG | 1 cut(s) | 239 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 297 |
| NlaIII | CATG | 1 cut(s) | 446 |
| NlaIV | GGNNCC | 1 cut(s) | 193 |
| PdmI | GAANNNNTTC | 1 cut(s) | 486 |
| PfeI | GAWTC | 5 cut(s) | 134, 386, 460, 539, 564 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PpuMI | RGGWCCY | 1 cut(s) | 508 |
| Psp5II | RGGWCCY | 1 cut(s) | 508 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 1 cut(s) | 193 |
| PspPI | GGNCC | 3 cut(s) | 70, 192, 508 |
| PspPPI | RGGWCCY | 1 cut(s) | 508 |
| RsaI | GTAC | 1 cut(s) | 551 |
| RsaNI | GTAC | 1 cut(s) | 550 |
| Sau3AI | GATC | 1 cut(s) | 297 |
| Sau96I | GGNCC | 3 cut(s) | 70, 192, 508 |
| ScaI | AGTACT | 1 cut(s) | 551 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 8 cut(s) | 13, 51, 288, 350, 405, 436, 513, 537 |
| SinI | GGWCC | 1 cut(s) | 508 |
| SmlI | CTYRAG | 1 cut(s) | 503 |
| SmoI | CTYRAG | 1 cut(s) | 503 |
| Sse9I | AATT | 3 cut(s) | 186, 196, 424 |
| SspMI | CTAG | 6 cut(s) | 8, 86, 117, 413, 525, 561 |
| TaiI | ACGT | 1 cut(s) | 350 |
| TaqI | TCGA | 2 cut(s) | 224, 406 |
| TasI | AATT | 3 cut(s) | 186, 196, 424 |
| TatI | WGTACW | 1 cut(s) | 549 |
| TfiI | GAWTC | 5 cut(s) | 134, 386, 460, 539, 564 |
| TspDTI | ATGAA | 4 cut(s) | 165, 210, 342, 495 |
| VpaK11BI | GGWCC | 1 cut(s) | 508 |
| XapI | RAATTY | 1 cut(s) | 424 |
| XmnI | GAANNNNTTC | 1 cut(s) | 486 |
| XspI | CTAG | 6 cut(s) | 8, 86, 117, 413, 525, 561 |
| ZrmI | AGTACT | 1 cut(s) | 551 |