ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1197000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0141241 RchiOBHm_Chr2g0145471 RchiOBHm_Chr7g0193751 |
| rosa_laevigata | RLG00000000961 RLG00000008242 RLG00000008722 RLG00000023244 RLG00000032752 |
| rosa_multiflora | Rmu_sc0008822.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00041370 |
| rosa_rugosa | Rorug05G0037800 Rorug05G0037900 |
| rosa_samantha | Rh1AG207800 Rh1BG186000 Rh1DG215600 Rh2BG456500 Rh4BG096200 Rh5BG071900 Rh6AG004600 |
| rosa_wichuraiana | Rw3G028510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 22, 172 |
| AcuI | CTGAAG | 1 cut(s) | 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 268 |
| AflIII | ACRYGT | 1 cut(s) | 95 |
| AgsI | TTSAA | 2 cut(s) | 52, 178 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 135, 167 |
| ApoI | RAATTY | 2 cut(s) | 22, 172 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 234 |
| AspS9I | GGNCC | 1 cut(s) | 256 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| AvaII | GGWCC | 1 cut(s) | 256 |
| BccI | CCATC | 1 cut(s) | 161 |
| BfaI | CTAG | 3 cut(s) | 161, 273, 306 |
| Bme18I | GGWCC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 1 cut(s) | 256 |
| BpmI | CTGGAG | 1 cut(s) | 68 |
| BpuEI | CTTGAG | 1 cut(s) | 236 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 268 |
| BseGI | GGATG | 1 cut(s) | 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 268 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 268 |
| BspCNI | CTCAG | 1 cut(s) | 271 |
| BstDEI | CTNAG | 1 cut(s) | 279 |
| BstF5I | GGATG | 1 cut(s) | 208 |
| BtsCI | GGATG | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 1 cut(s) | 256 |
| CviAII | CATG | 1 cut(s) | 191 |
| CviJI | RGCY | 1 cut(s) | 272 |
| CviKI_1 | RGCY | 1 cut(s) | 272 |
| DdeI | CTNAG | 1 cut(s) | 279 |
| Eco47I | GGWCC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 1 cut(s) | 93 |
| EcoO109I | RGGNCCY | 1 cut(s) | 256 |
| FaeI | CATG | 1 cut(s) | 194 |
| FaiI | YATR | 3 cut(s) | 147, 185, 192 |
| FatI | CATG | 1 cut(s) | 190 |
| FokI | GGATG | 1 cut(s) | 215 |
| FspBI | CTAG | 3 cut(s) | 161, 273, 306 |
| GsuI | CTGGAG | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 194 |
| HinfI | GANTC | 4 cut(s) | 134, 208, 287, 309 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy188I | TCNGA | 3 cut(s) | 112, 292, 314 |
| Hpy188III | TCNNGA | 2 cut(s) | 85, 212 |
| HpyAV | CCTTC | 2 cut(s) | 272, 276 |
| HpyCH4IV | ACGT | 1 cut(s) | 95 |
| HpyCH4V | TGCA | 1 cut(s) | 300 |
| HpyF3I | CTNAG | 1 cut(s) | 279 |
| HpySE526I | ACGT | 1 cut(s) | 95 |
| Hsp92II | CATG | 1 cut(s) | 194 |
| LpnPI | CCDG | 1 cut(s) | 98 |
| MaeI | CTAG | 3 cut(s) | 161, 273, 306 |
| MaeII | ACGT | 1 cut(s) | 95 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MboII | GAAGA | 1 cut(s) | 242 |
| MluCI | AATT | 4 cut(s) | 17, 22, 36, 172 |
| MmeI | TCCRAC | 1 cut(s) | 121 |
| MnlI | CCTC | 3 cut(s) | 110, 269, 274 |
| MroXI | GAANNNNTTC | 1 cut(s) | 234 |
| MseI | TTAA | 1 cut(s) | 20 |
| NlaIII | CATG | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 1 cut(s) | 234 |
| PfeI | GAWTC | 4 cut(s) | 134, 208, 287, 309 |
| PpuMI | RGGWCCY | 1 cut(s) | 256 |
| Psp5II | RGGWCCY | 1 cut(s) | 256 |
| PspPI | GGNCC | 1 cut(s) | 256 |
| PspPPI | RGGWCCY | 1 cut(s) | 256 |
| SaqAI | TTAA | 1 cut(s) | 20 |
| Sau96I | GGNCC | 1 cut(s) | 256 |
| SetI | ASST | 5 cut(s) | 98, 153, 184, 261, 285 |
| SinI | GGWCC | 1 cut(s) | 256 |
| SmlI | CTYRAG | 1 cut(s) | 251 |
| SmoI | CTYRAG | 1 cut(s) | 251 |
| Sse9I | AATT | 4 cut(s) | 17, 22, 36, 172 |
| SspMI | CTAG | 3 cut(s) | 161, 273, 306 |
| TaiI | ACGT | 1 cut(s) | 98 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TasI | AATT | 4 cut(s) | 17, 22, 36, 172 |
| TfiI | GAWTC | 4 cut(s) | 134, 208, 287, 309 |
| Tru1I | TTAA | 1 cut(s) | 20 |
| Tru9I | TTAA | 1 cut(s) | 20 |
| TspDTI | ATGAA | 3 cut(s) | 17, 239, 243 |
| VpaK11BI | GGWCC | 1 cut(s) | 256 |
| XapI | RAATTY | 2 cut(s) | 22, 172 |
| XmnI | GAANNNNTTC | 1 cut(s) | 234 |
| XspI | CTAG | 3 cut(s) | 161, 273, 306 |