RLG00000001549

Belongs to the ClpA ClpB family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004579
Physical Location & Seq
Reverse (-)
17314583 .. 17318190
3608 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001549

Sequence Viewer

Length: 1857 bp
ATGGCTGGGGTTTCAGTCCAGTTTAGTAATATTCCTAGTGTGGTTGCCGGGCGAAGGGCAACCAAGATGATTTGTCCTTTACAAGCACCTGCATTGAGATTGAGCAGTTTCTCAGGACTTCGTAGTGTTCATGCTTTAGATATTATGACGAGGCCTATGCAAGACTTATATTCTAATGTGGGAGAAGCTGTCTCCTCTCAGCGTCGAAATGCTTTCAGATGTGTGCCTAAAGCCATGTTTGAGCGCTTCTCAGAAAAGGCAATAAAGGTGATTATGCTTGCACAAGAGGAAGCAAGGCGACTTGGTCACAACTTCGTTGGTACAGAGCAGATACTTTTGGGTCTTATTGGTAAAGGAACTGGAATTGCTGCCAGGGTCCTTAAATATATGAGAATCAATCTTAAAGGTGCACGCGTTGAAGTGGAAAAGGTCATTGGAAGGGGTAGTGGCTTTGTTGCTGTTGAAATTCCATTCACTCCTCTTGCAAAGCGAGTTTTGGAACTGTCACTGGAGGAAGCTCGTCAACTGGGCCATAACTATATTGGATCTGAGCACTTGCTTTTGGGACTGCTTTGGGAAGGTGAGGGTGTGGTAGCTCGTGTTCTTGAAAATCTAGGTGCTGACCCCATCAACATTCGCACACAGGGAAAGCTGGATCCTGTTGTTGGAAGACAACCACAAATTGAACTTGTTGTCAAAATTTTGAGCTTGCGGAAGAAGAATAATGCCTGCCTTATTGGGGAACCTGGTGTTGGGAAGACTGCATTTGTAGAAGGTCTTGCTCAACGAATTGCAAGAGGTGATGTGCCTGAAACAATAGAGGGAAAGAAGGTTATCACTCTGGATATGGGTCTTCTGGTTGCTGGTACAAAATACCATGGAGAGTTCGAGGAAAGATTGACGAAACTAATTGAGGAAATCAAACAAAGTGATGAGATAATTTTGTTTATTGATGAGTGTATTGGAGCCACCACCCTAGACGAATACAGAAAGCACATTGAGAGAGACCCAGCATTGGAAAGACCTATCAGACCACTACATCAGCTACCTGAAGAAGCTAGAGATCTTGACAAAGAACTGAGACAGATTACCAAGTGGAAGAATGAAGCTGTTCGAAGCCAAGACTTTGAAAAGGTTGGGGAGTTACGTGAGAGAGAAATGGACCTTAAGACACAGATCAGAAATATAAAAGAGAAAGGGAAAGAGATGAACAAGGCTGAGAGCGAGGTAGGGGATGTAGGACCTATGGTAACTGAAGTGGATATTCAACATATCGTGTTCTCTTGGTCTGGTATTCCTGTTGACAAAGTGTCAGCTGATGAATCGGATCGCCTTCTCAAGATGGAAGAGACTCTCCATAAGCGGGTTATTGGTCAGGATGAAGCAGTCAAGGCTATTAGTCGTGCTATTCGCCGAGGCCGTGTTGGACTCAAATATCCTAATCGTCCAATTGCCAGTTTCATCTTTTCTGGTCCAACTGTTGGAAAATCCGAACTCGCAAAAGCATTGGCTGCGTACTACTTTGGCTCTGAAGAAGCCATGATTTGCCTTGATATGAGTGAATTTATGGAACAGCACTCTGTTTCAAAGCTTGTTGGTTCTCCCCCTGGTTATGTTGGTTACACTGATGGAGGTCAGCTGACTGAAGCCATTAGACGTCGTCCTTACACTGTGGTGCTATTTGATGAGATTGAGAAGGCTGATCCAGATGTCTTAAATATGATGCTTCAAATTCTTCAGGATGGAAGATTGACTGACAGCAAGGGTAGAACTGTGGATTTCAAGAATAGACTTCTGATTATGAGATCTAATGTCGGAAGCAGTGTAATTGAGAAAGGAGGACTCCGTGTAATTTGA

Protein Analysis

619

Amino Acids

68.85

Weight (kDa)

8.68

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Clp_N PF02861 82 - 204 2e-31 Clp repeat (R) N-terminal domain
NBD_SMAX1 PF23569 227 - 315 6.7e-06 SMAX1 nucleotide binding domain
AAA PF00004 244 - 319 3.1e-09 ATPase family associated with various cellular activities (AAA)
AAA_2 PF07724 482 - 612 5.1e-52 AAA domain (Cdc48 subfamily)
AAA_5 PF07728 494 - 605 3.5e-06 AAA domain (dynein-related subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 97
AatII GACGTC 1 cut(s) 1660
Acc36I ACCTGC 1 cut(s) 97
AccB7I CCANNNNNTGG 1 cut(s) 1481
AccII CGCG 1 cut(s) 414
AciI CCGC 2 cut(s) 712, 1363
AclWI GGATC 5 cut(s) 553, 650, 663, 1335, 1697
AcsI RAATTY 4 cut(s) 465, 699, 1562, 1731
AcuI CTGAAG 5 cut(s) 1071, 1275, 1551, 1665, 1721
AcyI GRCGYC 1 cut(s) 1657
AfaI GTAC 3 cut(s) 322, 868, 1517
AfeI AGCGCT 1 cut(s) 245
AfiI CCNNNNNNNGG 7 cut(s) 54, 665, 739, 752, 1015, 1363, 1481
AflII CTTAAG 1 cut(s) 1166
AflIII ACRYGT 1 cut(s) 412
AgsI TTSAA 9 cut(s) 419, 464, 608, 686, 1130, 1268, 1587, 1730, 1783
AhdI GACNNNNNGTC 1 cut(s) 1309
AjnI CCWGG 3 cut(s) 371, 745, 1606
AjuI GAANNNNNNNTTGG 4 cut(s) 417, 449, 735, 767
AleI CACNNNNGTG 1 cut(s) 1673
Alw21I GWGCWC 2 cut(s) 412, 555
Alw26I GTCTC 4 cut(s) 196, 999, 1075, 1343
Alw44I GTGCAC 1 cut(s) 408
AlwI GGATC 5 cut(s) 553, 650, 663, 1335, 1697
Aor51HI AGCGCT 1 cut(s) 245
AoxI GGCC 3 cut(s) 152, 529, 1417
ApaLI GTGCAC 1 cut(s) 408
ApeKI GCWGC 2 cut(s) 368, 1511
ApoI RAATTY 4 cut(s) 465, 699, 1562, 1731
Asp700I GAANNNNTTC 1 cut(s) 1110
AspLEI GCGC 1 cut(s) 246
AspS9I GGNCC 5 cut(s) 376, 529, 1162, 1241, 1472
AsuC2I CCSGG 1 cut(s) 49
AsuHPI GGTGA 3 cut(s) 280, 593, 812
AsuII TTCGAA 1 cut(s) 1114
AvaII GGWCC 4 cut(s) 376, 1162, 1241, 1472
BaeGI GKGCMC 1 cut(s) 412
BamHI GGATCC 1 cut(s) 655
BauI CACGAG 1 cut(s) 597
BbsI GAAGAC 3 cut(s) 676, 764, 845
Bbv12I GWGCWC 2 cut(s) 412, 555
BbvI GCAGC 2 cut(s) 355, 1498
BccI CCATC 4 cut(s) 635, 1336, 1622, 1736
BceAI ACGGC 1 cut(s) 1404
BcgI CGANNNNNNTGC 2 cut(s) 139, 173
BciT130I CCWGG 3 cut(s) 373, 747, 1608
BcnI CCSGG 1 cut(s) 49
BcoDI GTCTC 4 cut(s) 196, 999, 1075, 1343
BfaI CTAG 4 cut(s) 36, 614, 977, 1059
BfoI RGCGCY 1 cut(s) 247
BfrI CTTAAG 1 cut(s) 1166
BfuAI ACCTGC 1 cut(s) 97
BglII AGATCT 2 cut(s) 1063, 1805
BisI GCNGC 2 cut(s) 369, 1512
BlsI GCNGC 2 cut(s) 370, 1513
Bme1390I CCNGG 4 cut(s) 49, 373, 747, 1608
Bme18I GGWCC 4 cut(s) 376, 1162, 1241, 1472
BmeRI GACNNNNNGTC 1 cut(s) 1309
BmgT120I GGNCC 5 cut(s) 376, 529, 1162, 1241, 1472
BmiI GGNNCC 4 cut(s) 377, 657, 744, 967
BmrFI CCNGG 4 cut(s) 49, 373, 747, 1608
BmrI ACTGGG 1 cut(s) 536
BmsI GCATC 1 cut(s) 1713
BmuI ACTGGG 1 cut(s) 536
BpiI GAAGAC 3 cut(s) 676, 764, 845
BplI GAGNNNNNCTC 2 cut(s) 233, 265
BpmI CTGGAG 1 cut(s) 530
Bpu14I TTCGAA 1 cut(s) 1114
BpuEI CTTGAG 1 cut(s) 1322
BpuMI CCSGG 1 cut(s) 49
BsaAI YACGTR 1 cut(s) 1148
BsaHI GRCGYC 1 cut(s) 1657
BsaI GGTCTC 1 cut(s) 999
BsaJI CCNNGG 4 cut(s) 372, 877, 1414, 1606
BsaXI ACNNNNNCTCC 2 cut(s) 174, 204
Bsc4I CCNNNNNNNGG 7 cut(s) 54, 665, 739, 752, 1015, 1363, 1481
Bse1I ACTGG 5 cut(s) 19, 364, 513, 531, 1455
BseBI CCWGG 3 cut(s) 373, 747, 1608
BseDI CCNNGG 4 cut(s) 372, 877, 1414, 1606
BseGI GGATG 3 cut(s) 1240, 1384, 1747
BseLI CCNNNNNNNGG 7 cut(s) 54, 665, 739, 752, 1015, 1363, 1481
BseMII CTCAG 6 cut(s) 126, 212, 264, 540, 1070, 1209
BseNI ACTGG 5 cut(s) 19, 364, 513, 531, 1455
BseRI GAGGAG 2 cut(s) 184, 468
BseSI GKGCMC 1 cut(s) 412
BseXI GCAGC 2 cut(s) 355, 1498
BseYI CCCAGC 2 cut(s) 5, 1009
Bsh1236I CGCG 1 cut(s) 414
BshFI GGCC 3 cut(s) 154, 531, 1419
BsiHKAI GWGCWC 2 cut(s) 412, 555
BsiSI CCGG 1 cut(s) 48
BslFI GGGAC 1 cut(s) 579
BslI CCNNNNNNNGG 7 cut(s) 54, 665, 739, 752, 1015, 1363, 1481
BsmAI GTCTC 4 cut(s) 196, 999, 1075, 1343
BsmFI GGGAC 1 cut(s) 579
BsnI GGCC 3 cut(s) 154, 531, 1419
Bso31I GGTCTC 1 cut(s) 999
Bsp119I TTCGAA 1 cut(s) 1114
Bsp1286I GDGCHC 2 cut(s) 412, 555
Bsp143I GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
Bsp19I CCATGG 1 cut(s) 877
BspACI CCGC 2 cut(s) 712, 1363
BspANI GGCC 3 cut(s) 154, 531, 1419
BspCNI CTCAG 6 cut(s) 125, 211, 263, 541, 1071, 1210
BspFNI CGCG 1 cut(s) 414
BspLI GGNNCC 4 cut(s) 377, 657, 744, 967
BspMI ACCTGC 1 cut(s) 97
BspPI GGATC 5 cut(s) 553, 650, 663, 1335, 1697
BspT104I TTCGAA 1 cut(s) 1114
BspTI CTTAAG 1 cut(s) 1166
BspTNI GGTCTC 1 cut(s) 999
BsrI ACTGG 5 cut(s) 19, 364, 513, 531, 1455
BssECI CCNNGG 4 cut(s) 372, 877, 1414, 1606
BssMI GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
BssNI GRCGYC 1 cut(s) 1657
BssSI CACGAG 1 cut(s) 597
BssT1I CCWWGG 1 cut(s) 877
Bst2BI CACGAG 1 cut(s) 597
Bst2UI CCWGG 3 cut(s) 373, 747, 1608
Bst4CI ACNGT 4 cut(s) 504, 1480, 1672, 1774
Bst6I CTCTTC 1 cut(s) 1341
BstACI GRCGYC 1 cut(s) 1657
BstAFI CTTAAG 1 cut(s) 1166
BstAPI GCANNNNNTGC 1 cut(s) 1511
BstBAI YACGTR 1 cut(s) 1148
BstBI TTCGAA 1 cut(s) 1114
BstC8I GCNNGC 4 cut(s) 279, 412, 710, 730
BstDEI CTNAG 6 cut(s) 112, 198, 250, 549, 1079, 1218
BstDSI CCRYGG 1 cut(s) 877
BstF5I GGATG 3 cut(s) 1240, 1384, 1747
BstFNI CGCG 1 cut(s) 414
BstH2I RGCGCY 1 cut(s) 247
BstHHI GCGC 1 cut(s) 246
BstKTI GATC 7 cut(s) 548, 658, 1066, 1179, 1330, 1705, 1808
BstMAI GTCTC 4 cut(s) 196, 999, 1075, 1343
BstMBI GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
BstMWI GCNNNNNNNGC 2 cut(s) 1391, 1511
BstNI CCWGG 3 cut(s) 373, 747, 1608
BstSCI CCNGG 4 cut(s) 47, 371, 745, 1606
BstSLI GKGCMC 1 cut(s) 412
BstUI CGCG 1 cut(s) 414
BstV1I GCAGC 2 cut(s) 355, 1498
BstV2I GAAGAC 3 cut(s) 676, 764, 845
BstX2I RGATCY 4 cut(s) 545, 655, 1063, 1805
BstYI RGATCY 4 cut(s) 545, 655, 1063, 1805
BsuRI GGCC 3 cut(s) 154, 531, 1419
BtgI CCRYGG 1 cut(s) 877
BtsCI GGATG 3 cut(s) 1240, 1384, 1747
BtsI GCAGTG 1 cut(s) 1828
BtsIMutI CAGTG 4 cut(s) 506, 1623, 1668, 1828
BveI ACCTGC 1 cut(s) 97
Cac8I GCNNGC 4 cut(s) 279, 412, 710, 730
CfoI GCGC 1 cut(s) 246
Cfr13I GGNCC 5 cut(s) 376, 529, 1162, 1241, 1472
CseI GACGC 1 cut(s) 191
CsiI ACCWGGT 1 cut(s) 745
Csp6I GTAC 3 cut(s) 321, 867, 1516
CviAII CATG 4 cut(s) 131, 235, 878, 1540
CviQI GTAC 3 cut(s) 321, 867, 1516
DdeI CTNAG 6 cut(s) 112, 198, 250, 549, 1079, 1218
DpnI GATC 7 cut(s) 547, 657, 1065, 1178, 1329, 1704, 1807
DpnII GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
DriI GACNNNNNGTC 1 cut(s) 1309
Eam1104I CTCTTC 1 cut(s) 1341
Eam1105I GACNNNNNGTC 1 cut(s) 1309
EarI CTCTTC 1 cut(s) 1341
Eco130I CCWWGG 1 cut(s) 877
Eco147I AGGCCT 1 cut(s) 154
Eco31I GGTCTC 1 cut(s) 999
Eco47I GGWCC 4 cut(s) 376, 1162, 1241, 1472
Eco47III AGCGCT 1 cut(s) 245
Eco57I CTGAAG 5 cut(s) 1071, 1275, 1551, 1665, 1721
EcoO109I RGGNCCY 2 cut(s) 376, 1241
EcoRII CCWGG 3 cut(s) 371, 745, 1606
EcoT14I CCWWGG 1 cut(s) 877
ErhI CCWWGG 1 cut(s) 877
FaeI CATG 4 cut(s) 134, 238, 881, 1543
FaqI GGGAC 1 cut(s) 579
FatI CATG 4 cut(s) 130, 234, 877, 1539
FauI CCCGC 1 cut(s) 1356
Fnu4HI GCNGC 2 cut(s) 369, 1512
FokI GGATG 3 cut(s) 1247, 1391, 1754
Fsp4HI GCNGC 2 cut(s) 369, 1512
FspBI CTAG 4 cut(s) 36, 614, 977, 1059
GlaI GCGC 1 cut(s) 245
GluI GCNGC 2 cut(s) 369, 1512
GsaI CCCAGC 2 cut(s) 9, 1013
GsuI CTGGAG 1 cut(s) 530
HaeII RGCGCY 1 cut(s) 247
HaeIII GGCC 3 cut(s) 154, 531, 1419
HapII CCGG 1 cut(s) 48
HgaI GACGC 1 cut(s) 191
HhaI GCGC 1 cut(s) 246
Hin1I GRCGYC 1 cut(s) 1657
Hin1II CATG 4 cut(s) 134, 238, 881, 1543
Hin6I GCGC 1 cut(s) 244
HinP1I GCGC 1 cut(s) 244
HincII GTYRAC 2 cut(s) 524, 1303
HindII GTYRAC 2 cut(s) 524, 1303
HindIII AAGCTT 1 cut(s) 1589
HinfI GANTC 5 cut(s) 393, 1322, 1351, 1428, 1842
HpaII CCGG 1 cut(s) 48
HphI GGTGA 3 cut(s) 280, 593, 812
Hpy166II GTNNAC 3 cut(s) 410, 524, 1303
Hpy188III TCNNGA 9 cut(s) 114, 605, 842, 1067, 1339, 1376, 1706, 1739, 1783
Hpy8I GTNNAC 3 cut(s) 410, 524, 1303
Hpy99I CGWCG 2 cut(s) 207, 1662
HpyAV CCTTC 7 cut(s) 48, 432, 572, 767, 823, 1343, 1690
HpyCH4III ACNGT 4 cut(s) 504, 1480, 1672, 1774
HpyCH4IV ACGT 2 cut(s) 1147, 1657
HpyCH4V TGCA 7 cut(s) 92, 160, 281, 410, 485, 764, 794
HpyF10VI GCNNNNNNNGC 2 cut(s) 1391, 1511
HpyF3I CTNAG 6 cut(s) 112, 198, 250, 549, 1079, 1218
HpySE526I ACGT 2 cut(s) 1147, 1657
Hsp92I GRCGYC 1 cut(s) 1657
Hsp92II CATG 4 cut(s) 134, 238, 881, 1543
HspAI GCGC 1 cut(s) 244
Kzo9I GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
LmnI GCTCC 1 cut(s) 965
Lsp1109I GCAGC 2 cut(s) 355, 1498
LweI GCATC 1 cut(s) 1713
MabI ACCWGGT 1 cut(s) 745
MaeI CTAG 4 cut(s) 36, 614, 977, 1059
MaeII ACGT 2 cut(s) 1147, 1657
MaeIII GTNAC 5 cut(s) 305, 504, 1143, 1249, 1619
MalI GATC 7 cut(s) 547, 657, 1065, 1178, 1329, 1704, 1807
MboI GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
MfeI CAATTG 1 cut(s) 1449
MflI RGATCY 4 cut(s) 545, 655, 1063, 1805
MhlI GDGCHC 2 cut(s) 412, 555
MluI ACGCGT 1 cut(s) 412
MlyI GAGTC 3 cut(s) 1345, 1422, 1836
MmeI TCCRAC 5 cut(s) 646, 1405, 1462, 1499, 1795
MroXI GAANNNNTTC 1 cut(s) 1110
MseI TTAA 4 cut(s) 381, 402, 1167, 1715
MslI CAYNNNNRTG 1 cut(s) 1673
MspA1I CMGCKG 2 cut(s) 1316, 1639
MspCI CTTAAG 1 cut(s) 1166
MspI CCGG 1 cut(s) 48
MspR9I CCNGG 4 cut(s) 49, 373, 747, 1608
MunI CAATTG 1 cut(s) 1449
MvaI CCWGG 3 cut(s) 373, 747, 1608
MvnI CGCG 1 cut(s) 414
MwoI GCNNNNNNNGC 2 cut(s) 1391, 1511
NciI CCSGG 1 cut(s) 49
NcoI CCATGG 1 cut(s) 877
NdeII GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
NlaIII CATG 4 cut(s) 134, 238, 881, 1543
NlaIV GGNNCC 4 cut(s) 377, 657, 744, 967
NmeAIII GCCGAG 1 cut(s) 1439
NmuCI GTSAC 2 cut(s) 305, 504
NspV TTCGAA 1 cut(s) 1114
OliI CACNNNNGTG 1 cut(s) 1673
PaqCI CACCTGC 1 cut(s) 97
PceI AGGCCT 1 cut(s) 154
PcsI WCGNNNNNNNCGW 1 cut(s) 1417
PdmI GAANNNNTTC 1 cut(s) 1110
PfeI GAWTC 2 cut(s) 393, 1322
PflFI GACNNNGTC 2 cut(s) 303, 1659
PflMI CCANNNNNTGG 1 cut(s) 1481
PkrI GCNGC 2 cut(s) 370, 1513
PleI GAGTC 3 cut(s) 1345, 1422, 1836
PpsI GAGTC 3 cut(s) 1345, 1422, 1836
Ppu21I YACGTR 1 cut(s) 1148
PpuMI RGGWCCY 2 cut(s) 376, 1241
Psp5II RGGWCCY 2 cut(s) 376, 1241
Psp6I CCWGG 3 cut(s) 371, 745, 1606
PspFI CCCAGC 2 cut(s) 5, 1009
PspGI CCWGG 3 cut(s) 371, 745, 1606
PspN4I GGNNCC 4 cut(s) 377, 657, 744, 967
PspPI GGNCC 5 cut(s) 376, 529, 1162, 1241, 1472
PspPPI RGGWCCY 2 cut(s) 376, 1241
PsrI GAACNNNNNNTAC 2 cut(s) 585, 617
PsuI RGATCY 4 cut(s) 545, 655, 1063, 1805
PsyI GACNNNGTC 2 cut(s) 303, 1659
PvuII CAGCTG 2 cut(s) 1316, 1639
RsaI GTAC 3 cut(s) 322, 868, 1517
RsaNI GTAC 3 cut(s) 321, 867, 1516
RseI CAYNNNNRTG 1 cut(s) 1673
SaqAI TTAA 4 cut(s) 381, 402, 1167, 1715
SatI GCNGC 2 cut(s) 369, 1512
Sau3AI GATC 7 cut(s) 545, 655, 1063, 1176, 1327, 1702, 1805
Sau96I GGNCC 5 cut(s) 376, 529, 1162, 1241, 1472
SchI GAGTC 3 cut(s) 1345, 1422, 1836
ScrFI CCNGG 4 cut(s) 49, 373, 747, 1608
SduI GDGCHC 2 cut(s) 412, 555
SexAI ACCWGGT 1 cut(s) 745
SfaNI GCATC 1 cut(s) 1713
SfuI TTCGAA 1 cut(s) 1114
SinI GGWCC 4 cut(s) 376, 1162, 1241, 1472
SmiMI CAYNNNNRTG 1 cut(s) 1673
SmlI CTYRAG 2 cut(s) 1166, 1337
SmoI CTYRAG 2 cut(s) 1166, 1337
SseBI AGGCCT 1 cut(s) 154
SsiI CCGC 2 cut(s) 712, 1363
SspI AATATT 1 cut(s) 31
SspMI CTAG 4 cut(s) 36, 614, 977, 1059
StuI AGGCCT 1 cut(s) 154
StyD4I CCNGG 4 cut(s) 47, 371, 745, 1606
StyI CCWWGG 1 cut(s) 877
TaaI ACNGT 4 cut(s) 504, 1480, 1672, 1774
TaiI ACGT 2 cut(s) 1150, 1660
TaqI TCGA 3 cut(s) 205, 888, 1114
TfiI GAWTC 2 cut(s) 393, 1322
Tru1I TTAA 4 cut(s) 381, 402, 1167, 1715
Tru9I TTAA 4 cut(s) 381, 402, 1167, 1715
TscAI CASTG 4 cut(s) 513, 1630, 1675, 1828
TseFI GTSAC 2 cut(s) 305, 504
TseI GCWGC 2 cut(s) 368, 1511
Tsp45I GTSAC 2 cut(s) 305, 504
TspDTI ATGAA 6 cut(s) 119, 1119, 1223, 1335, 1395, 1450
TspGWI ACGGA 1 cut(s) 1835
TspRI CASTG 4 cut(s) 513, 1630, 1675, 1828
Tth111I GACNNNGTC 2 cut(s) 303, 1659
Van91I CCANNNNNTGG 1 cut(s) 1481
Vha464I CTTAAG 1 cut(s) 1166
VneI GTGCAC 1 cut(s) 408
VpaK11BI GGWCC 4 cut(s) 376, 1162, 1241, 1472
XapI RAATTY 4 cut(s) 465, 699, 1562, 1731
XcmI CCANNNNNNNNNTGG 1 cut(s) 539
XmnI GAANNNNTTC 1 cut(s) 1110
XspI CTAG 4 cut(s) 36, 614, 977, 1059
ZraI GACGTC 1 cut(s) 1658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.