RLG00000007433

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
16727985 .. 16728347
363 bp
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UTR
Exon/CDS
Intron
RLM00000007433

Sequence Viewer

Length: 363 bp
ATGGCATCAGGTCAGCTATTTCTAAAGCCTACAAATGCTTGCTTTCTCAGGCAATGTCGTTCTGATGAAATATCAACGGTGAAGGTCGAGCACCAAAAGAGCGAGGACGCCTCAAGGCCACCACATACTTCCCCAAAGCCTGTTTCCAAGAATGCCAAAAGTGACCAAAAGAAGAAAGGAAGGAAGAAGAAGAGTGGCAAAGGCGGAGGCTCTGTTTTTCGCATTAATGGGAACACCATTAACGGAGGCAAAGCTGACAAAGCTGGAGTTTTCGGCTTTGGGAATAAGTATATAGGCCACAAGAAACGAGAGGAAGAAGAATCCAGTGAAGAAGAAAGCGACTCCAGTGAAGACGAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

121

Amino Acids

13.13

Weight (kDa)

9.23

Isoelectric Point (pI)

60.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 204
AcyI GRCGYC 1 cut(s) 108
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AluBI AGCT 3 cut(s) 16, 254, 263
AluI AGCT 3 cut(s) 16, 254, 263
Alw21I GWGCWC 1 cut(s) 93
AoxI GGCC 2 cut(s) 116, 295
AseI ATTAAT 1 cut(s) 225
AsuHPI GGTGA 1 cut(s) 91
BbsI GAAGAC 1 cut(s) 357
Bbv12I GWGCWC 1 cut(s) 93
BmsI GCATC 1 cut(s) 14
BpiI GAAGAC 1 cut(s) 357
BplI GAGNNNNNCTC 2 cut(s) 95, 127
BpmI CTGGAG 2 cut(s) 285, 328
BpuEI CTTGAG 1 cut(s) 97
BsaHI GRCGYC 1 cut(s) 108
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bse1I ACTGG 2 cut(s) 324, 345
Bse3DI GCAATG 1 cut(s) 59
BseMI GCAATG 1 cut(s) 59
BseMII CTCAG 1 cut(s) 61
BseNI ACTGG 2 cut(s) 324, 345
BshFI GGCC 2 cut(s) 118, 297
BsiHKAI GWGCWC 1 cut(s) 93
BsmI GAATGC 1 cut(s) 157
BsnI GGCC 2 cut(s) 118, 297
Bsp1286I GDGCHC 1 cut(s) 93
BspACI CCGC 1 cut(s) 204
BspANI GGCC 2 cut(s) 118, 297
BspCNI CTCAG 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 59
BsrI ACTGG 2 cut(s) 324, 345
BssNI GRCGYC 1 cut(s) 108
Bst4CI ACNGT 1 cut(s) 79
Bst6I CTCTTC 1 cut(s) 185
BstACI GRCGYC 1 cut(s) 108
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 1 cut(s) 47
BstMWI GCNNNNNNNGC 1 cut(s) 260
BstV2I GAAGAC 1 cut(s) 357
BsuRI GGCC 2 cut(s) 118, 297
BtsIMutI CAGTG 2 cut(s) 331, 352
Cac8I GCNNGC 1 cut(s) 40
CseI GACGC 1 cut(s) 116
CviJI RGCY 9 cut(s) 16, 28, 118, 139, 210, 254, 263, 276, 297
CviKI_1 RGCY 9 cut(s) 16, 28, 118, 139, 210, 254, 263, 276, 297
DdeI CTNAG 1 cut(s) 47
Eam1104I CTCTTC 1 cut(s) 185
EarI CTCTTC 1 cut(s) 185
EciI GGCGGA 1 cut(s) 219
FaiI YATR 3 cut(s) 126, 291, 293
GsuI CTGGAG 2 cut(s) 285, 328
HaeIII GGCC 2 cut(s) 118, 297
HgaI GACGC 1 cut(s) 116
Hin1I GRCGYC 1 cut(s) 108
HinfI GANTC 2 cut(s) 320, 341
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 64
HpyAV CCTTC 2 cut(s) 76, 174
HpyCH4III ACNGT 1 cut(s) 79
HpyF10VI GCNNNNNNNGC 1 cut(s) 260
HpyF3I CTNAG 1 cut(s) 47
Hsp92I GRCGYC 1 cut(s) 108
LpnPI CCDG 5 cut(s) 34, 153, 249, 337, 358
LweI GCATC 1 cut(s) 14
MaeIII GTNAC 1 cut(s) 161
MboII GAAGA 9 cut(s) 184, 196, 199, 202, 326, 329, 341, 344, 362
MhlI GDGCHC 1 cut(s) 93
MlyI GAGTC 1 cut(s) 335
MnlI CCTC 6 cut(s) 97, 121, 200, 239, 304, 349
MseI TTAA 2 cut(s) 225, 240
Mva1269I GAATGC 1 cut(s) 157
MwoI GCNNNNNNNGC 1 cut(s) 260
NmuCI GTSAC 1 cut(s) 161
PctI GAATGC 1 cut(s) 157
PfeI GAWTC 1 cut(s) 320
PleI GAGTC 1 cut(s) 335
PpsI GAGTC 1 cut(s) 335
PshBI ATTAAT 1 cut(s) 225
SaqAI TTAA 2 cut(s) 225, 240
SchI GAGTC 1 cut(s) 335
SduI GDGCHC 1 cut(s) 93
SetI ASST 5 cut(s) 13, 18, 87, 256, 265
SfaNI GCATC 1 cut(s) 14
SmlI CTYRAG 1 cut(s) 112
SmoI CTYRAG 1 cut(s) 112
SsiI CCGC 1 cut(s) 204
TaaI ACNGT 1 cut(s) 79
TaqI TCGA 1 cut(s) 87
TfiI GAWTC 1 cut(s) 320
Tru1I TTAA 2 cut(s) 225, 240
Tru9I TTAA 2 cut(s) 225, 240
TscAI CASTG 2 cut(s) 331, 352
TseFI GTSAC 1 cut(s) 161
Tsp45I GTSAC 1 cut(s) 161
TspDTI ATGAA 1 cut(s) 81
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 2 cut(s) 331, 352
VspI ATTAAT 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.