PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57610 |
| fragaria_vesca | FvH4_4g09060 FvH4_4g09060 |
| malus_domestica | MD13G1266700.v1.1 MD16G1266900.v1.1 |
| prunus_persica | Prupe.1G089600_v2.0.a1 Prupe.1G089600_v2.0.a1 Prupe.1G089600_v2.0.a1 Prupe.1G089600_v2.0.a1 |
| pyrus_communis | pycom13g22910 pycom16g23590 |
| rosa_chinensis | RchiOBHm_Chr4g0403261 RchiOBHm_Chr4g0403321 RchiOBHm_Chr4g0404461 |
| rosa_laevigata | RLG00000008983 RLG00000008986 RLG00000008987 RLG00000008990 RLG00000008992 |
| rosa_multiflora | Rmu_sc0000381.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00347950 |
| rosa_rugosa | Rorug04G0041100 Rorug04G0041200 Rorug04G0041300 |
| rosa_samantha | Rh4AG118400 Rh4BG110800 Rh4CG125700 Rh4DG111100 |
| rosa_wichuraiana | Rw0G019080 Rw4G009600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 36 |
| AccB1I | GGYRCC | 1 cut(s) | 36 |
| AciI | CCGC | 1 cut(s) | 301 |
| AcoI | YGGCCR | 1 cut(s) | 101 |
| AcuI | CTGAAG | 1 cut(s) | 108 |
| AfaI | GTAC | 3 cut(s) | 38, 284, 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 33 |
| AgsI | TTSAA | 2 cut(s) | 112, 199 |
| AjnI | CCWGG | 1 cut(s) | 121 |
| AluBI | AGCT | 2 cut(s) | 316, 331 |
| AluI | AGCT | 2 cut(s) | 316, 331 |
| AoxI | GGCC | 1 cut(s) | 101 |
| ApeKI | GCWGC | 1 cut(s) | 328 |
| Asp718I | GGTACC | 1 cut(s) | 36 |
| AsuHPI | GGTGA | 1 cut(s) | 286 |
| AxyI | CCTNAGG | 1 cut(s) | 270 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 231, 264 |
| BanI | GGYRCC | 1 cut(s) | 36 |
| BbvI | GCAGC | 1 cut(s) | 340 |
| BccI | CCATC | 3 cut(s) | 178, 261, 265 |
| BceAI | ACGGC | 4 cut(s) | 31, 88, 116, 250 |
| BciT130I | CCWGG | 1 cut(s) | 123 |
| BisI | GCNGC | 1 cut(s) | 329 |
| BlsI | GCNGC | 1 cut(s) | 330 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| BmiI | GGNNCC | 1 cut(s) | 38 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BmsI | GCATC | 2 cut(s) | 280, 339 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 33 |
| Bse21I | CCTNAGG | 1 cut(s) | 270 |
| BseBI | CCWGG | 1 cut(s) | 123 |
| BseGI | GGATG | 3 cut(s) | 249, 253, 257 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 33 |
| BseRI | GAGGAG | 1 cut(s) | 197 |
| BseX3I | CGGCCG | 1 cut(s) | 101 |
| BseXI | GCAGC | 1 cut(s) | 340 |
| BsgI | GTGCAG | 1 cut(s) | 15 |
| Bsh1285I | CGRYCG | 1 cut(s) | 104 |
| BshFI | GGCC | 1 cut(s) | 103 |
| BshNI | GGYRCC | 1 cut(s) | 36 |
| BsiEI | CGRYCG | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 33 |
| BsmI | GAATGC | 2 cut(s) | 87, 194 |
| BsnI | GGCC | 1 cut(s) | 103 |
| BspACI | CCGC | 1 cut(s) | 301 |
| BspANI | GGCC | 1 cut(s) | 103 |
| BspLI | GGNNCC | 1 cut(s) | 38 |
| BspT107I | GGYRCC | 1 cut(s) | 36 |
| Bst2UI | CCWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 3 cut(s) | 36, 41, 144 |
| BstDEI | CTNAG | 1 cut(s) | 270 |
| BstF5I | GGATG | 3 cut(s) | 249, 253, 257 |
| BstMCI | CGRYCG | 1 cut(s) | 104 |
| BstNI | CCWGG | 1 cut(s) | 123 |
| BstNSI | RCATGY | 1 cut(s) | 196 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstV1I | GCAGC | 1 cut(s) | 340 |
| BstZI | CGGCCG | 1 cut(s) | 101 |
| Bsu36I | CCTNAGG | 1 cut(s) | 270 |
| BsuRI | GGCC | 1 cut(s) | 103 |
| BtsCI | GGATG | 3 cut(s) | 249, 253, 257 |
| Csp6I | GTAC | 3 cut(s) | 37, 283, 298 |
| CviAII | CATG | 2 cut(s) | 193, 287 |
| CviJI | RGCY | 5 cut(s) | 103, 121, 166, 316, 331 |
| CviKI_1 | RGCY | 5 cut(s) | 103, 121, 166, 316, 331 |
| CviQI | GTAC | 3 cut(s) | 37, 283, 298 |
| DdeI | CTNAG | 1 cut(s) | 270 |
| EaeI | YGGCCR | 1 cut(s) | 101 |
| EagI | CGGCCG | 1 cut(s) | 101 |
| EclXI | CGGCCG | 1 cut(s) | 101 |
| Eco52I | CGGCCG | 1 cut(s) | 101 |
| Eco57I | CTGAAG | 1 cut(s) | 108 |
| Eco81I | CCTNAGG | 1 cut(s) | 270 |
| EcoRII | CCWGG | 1 cut(s) | 121 |
| EcoT22I | ATGCAT | 1 cut(s) | 194 |
| FaeI | CATG | 2 cut(s) | 196, 290 |
| FaiI | YATR | 9 cut(s) | 44, 96, 129, 163, 194, 244, 246, 288, 321 |
| FatI | CATG | 2 cut(s) | 192, 286 |
| FauNDI | CATATG | 1 cut(s) | 244 |
| Fnu4HI | GCNGC | 1 cut(s) | 329 |
| FokI | GGATG | 3 cut(s) | 236, 240, 244 |
| Fsp4HI | GCNGC | 1 cut(s) | 329 |
| GluI | GCNGC | 1 cut(s) | 329 |
| HaeIII | GGCC | 1 cut(s) | 103 |
| Hin1II | CATG | 2 cut(s) | 196, 290 |
| HinfI | GANTC | 2 cut(s) | 112, 206 |
| HphI | GGTGA | 1 cut(s) | 286 |
| Hpy188I | TCNGA | 2 cut(s) | 76, 151 |
| Hpy188III | TCNNGA | 1 cut(s) | 311 |
| HpyCH4III | ACNGT | 3 cut(s) | 36, 41, 144 |
| HpyCH4V | TGCA | 4 cut(s) | 32, 53, 98, 192 |
| HpyF3I | CTNAG | 1 cut(s) | 270 |
| Hsp92II | CATG | 2 cut(s) | 196, 290 |
| KpnI | GGTACC | 1 cut(s) | 40 |
| LpnPI | CCDG | 5 cut(s) | 75, 99, 108, 135, 338 |
| Lsp1109I | GCAGC | 1 cut(s) | 340 |
| LweI | GCATC | 2 cut(s) | 280, 339 |
| MboII | GAAGA | 2 cut(s) | 101, 289 |
| MluCI | AATT | 1 cut(s) | 228 |
| MmeI | TCCRAC | 1 cut(s) | 38 |
| MnlI | CCTC | 4 cut(s) | 37, 175, 178, 196 |
| Mph1103I | ATGCAT | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| Mva1269I | GAATGC | 2 cut(s) | 87, 194 |
| MvaI | CCWGG | 1 cut(s) | 123 |
| NdeI | CATATG | 1 cut(s) | 244 |
| NlaIII | CATG | 2 cut(s) | 196, 290 |
| NlaIV | GGNNCC | 1 cut(s) | 38 |
| NmeAIII | GCCGAG | 1 cut(s) | 319 |
| NsiI | ATGCAT | 1 cut(s) | 194 |
| NspI | RCATGY | 1 cut(s) | 196 |
| PctI | GAATGC | 2 cut(s) | 87, 194 |
| PfeI | GAWTC | 2 cut(s) | 112, 206 |
| PkrI | GCNGC | 1 cut(s) | 330 |
| Psp6I | CCWGG | 1 cut(s) | 121 |
| PspGI | CCWGG | 1 cut(s) | 121 |
| PspN4I | GGNNCC | 1 cut(s) | 38 |
| RsaI | GTAC | 3 cut(s) | 38, 284, 299 |
| RsaNI | GTAC | 3 cut(s) | 37, 283, 298 |
| SatI | GCNGC | 1 cut(s) | 329 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SetI | ASST | 5 cut(s) | 29, 64, 276, 318, 333 |
| SfaNI | GCATC | 2 cut(s) | 280, 339 |
| Sse9I | AATT | 1 cut(s) | 228 |
| SsiI | CCGC | 1 cut(s) | 301 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| TaaI | ACNGT | 3 cut(s) | 36, 41, 144 |
| TasI | AATT | 1 cut(s) | 228 |
| TfiI | GAWTC | 2 cut(s) | 112, 206 |
| TseI | GCWGC | 1 cut(s) | 328 |
| TspDTI | ATGAA | 1 cut(s) | 144 |
| XceI | RCATGY | 1 cut(s) | 196 |
| Zsp2I | ATGCAT | 1 cut(s) | 194 |