RLG00000008992

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0005070
Physical Location & Seq
Reverse (-)
44418145 .. 44421051
2907 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008992

Sequence Viewer

Length: 2328 bp
ATGCTAGCAAGAGGAGAAACGCGAAAAGCAGGAATTGCATGCTTGAGTGAGTCGGATAACCCAATTGATCAGCAGCAGCAACAGGCTGTCTACTTGATGGAGAGCCCTTCCACTGCCCCTCACTTTGGCTCTAATTCCACTCATGCTTCCAGCCCTGTTTTGAATGAGGACAATCATCCTCGTGTTAAATTTCTGTGTAGTTTCTCCGGTAGTATATTGCCTCGGCCGCAGGATGGGAGGCTCCGATATGTCGGTGGGGAGACACGGATTGTTAGTGTTCTGCGAGACATTAGTTATGAGGAGTTGATGAGCAAGATGAGGGAGCATTATGAAGGTGCGGCGGTGCTTAAGTACCAGCAACCGGATGAGGACCTTGACGCCCTTGTCTCGGTTGTGAATGATGATGATGTGACCAACATGATGGAAGAGTATGATAAGTTGGGGTCGGGTGATGGTTTCACCAGGCTCAGGATTTTTTTGTTTCCGTATCCCGACCAAGATGGTGGCTCCTCACACTATGACGGGGATGAAAGGGATCATGAGAGGAGGTATGTTGATGCTCTCAATAACTTAAATGATGGTTCCGATTTTAGGAAGCAGCATTTAGAGTCCCCTGTTATCACTTCAGTTGATGATCTCTATGGAGTGGAACAGTTCTTTAGTCCAATTAGTCTCGAGGGTGGCCTCCTTAGCCAGAGAAACGAGATATCCATGTCTCATTATAACCTGCATCACCTCAAAATACCTCATATAGGTTCAGGGCAACACCATCAGCCCGTTAGCCAAAGGTATAATGACATGGAAGCTCCATGGAGTCCTGCATACTATTCTCCTAGGCATCATGGACACCTTGATTCAAGACCAATGGCAGAGTTTCCAACTTCTCCTACCTCTGCACGGTACCGTATGCCATTTGCAGATTTACCTGATAAATGTTCAGATAGAATGCCTGAAGAATATGCACGGCCGCCATTGAATCATCAGCCTGGATATGAACACCAACCACAGTATTCTGATAATGCTGTATGGCTTCCAAGTGGAGCTATATCTGGTGAGAAGTCAGGCTTTCCAGGTAACATTTTTCATGGAAACAATGTTCTCGAAGGAAACAGTGTCTGTGAACACTGTCGGGTATGTTTCCAAAGAAACCAACCACATTTCGAGCAACCCAACATGGTCAATGGATTTCATCAGGTTGCTAATACATGTGCTGATTGCCGTCCAAAGTTGCACCATGGTTACACAACTGAGCAGAATAACGATTCTTCACCTCTATATAATGAGAATCAAAATCAATGGGTTCCACACCATTTGAATAGCCGGGCTGAGGAAGCAAGATCACATGTCTCTGGAACTGGAAAATTGAACGATCGCTACATTGTAGATGGTCCTGGCATGAATTTGCCTCTTGTTCATAATAATATGGTGGATGTCCATCACGTCTCTACCAATTTTGTCCATCAACGAGCTGGGTCTGAAATGGGAAATGACGTGTTTCATGACCGACCGGTGGCTGGCCCACCCCACGTACACATTCCTCCTGTAGAAGACCGTGGCGTTCGATATGGAAATCTTCCTTATGCTTACGGAGGAGATAATGTTTACCCAGTGTCTCATGGACATGCACCGGGACGTGGAGTATGGAGAAATGTTCATAGCACAATGCACCATGTGCCCCCTTACGATGCATCCAATTCAGCTCCCCAAATTAATGGTTCTGTCAATCCAGGATATCTCAGACACGAGGGTAGTCCAAGATTTTGCATTGCAGCAGACAATCAGAATCTTTGGGTTGAATCATCGCAGAAGGTGTTAGGTTTTGACGGAAAATCTGTTCCGGACTATTCTTACGGCCAAGCTTTGAACTTGAACCCTAACACACTTGCTCATGAAAATCATCATCAATTTCCTCCAGAACTCATTCAACCCACACCTGATATAGTAAGTTCTGCTACCCCTTTGGACAGCCTCCCTAGAGTTATGTTGGATACAGAGAGTTTACCTAGAGAAGGAAGGGAGGTGATTGATGGAGAGAAGGTTGAGAACTCTGATATGCAGGTTATAAATAAAAAAGAATTGGGTGATATAAGTGAAGTGGTGCCTCTCGAGTTAGTAAATTCAAATTGTCTCAAGTTCGCAGAAGAAAGTGGTGACAAGGATCATTCTACTCCTGAAATTTCAAAGCTTTCTGCTAACAATTTGAGTTTTGTGCCTGAGTTGATTGCTTCTGTAAAAAAAGTGGCCATATATGGGGTAGAGGAGGTAAAAGCAAAAGTTGAGGAAAGTACTGATATGAACTGCTTTGATGGAAAACTTCTTGAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1 Pkinase_Tyr

Protein Analysis

776

Amino Acids

86.65

Weight (kDa)

5.41

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 78 - 162 2e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 723, 2063
AasI GACNNNNNNGTC 1 cut(s) 383
Acc36I ACCTGC 2 cut(s) 735, 2047
Acc65I GGTACC 1 cut(s) 900
AccB1I GGYRCC 2 cut(s) 900, 2098
AccI GTMKAC 1 cut(s) 90
AccII CGCG 1 cut(s) 22
AccIII TCCGGA 1 cut(s) 1837
AciI CCGC 4 cut(s) 227, 338, 341, 968
AclWI GGATC 2 cut(s) 543, 2166
AcoI YGGCCR 4 cut(s) 224, 965, 1852, 2241
AcsI RAATTY 4 cut(s) 188, 1399, 2116, 2175
AcuI CTGAAG 2 cut(s) 609, 972
AcyI GRCGYC 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 1672
AfaI GTAC 4 cut(s) 353, 902, 1530, 2287
AflII CTTAAG 1 cut(s) 347
AflIII ACRYGT 3 cut(s) 1205, 1342, 1491
AgeI ACCGGT 1 cut(s) 1507
AjiI CACGTC 3 cut(s) 1441, 1492, 1634
AjnI CCWGG 5 cut(s) 461, 985, 1069, 1390, 1726
AloI GAACNNNNNNTCC 4 cut(s) 1080, 1112, 1818, 1850
AluBI AGCT 6 cut(s) 806, 1043, 1469, 1700, 1859, 2185
AluI AGCT 6 cut(s) 806, 1043, 1469, 1700, 1859, 2185
Alw26I GTCTC 9 cut(s) 254, 279, 391, 677, 720, 1351, 1447, 1617, 2132
AlwI GGATC 2 cut(s) 543, 2166
AlwNI CAGNNNCTG 1 cut(s) 1116
Ama87I CYCGRG 2 cut(s) 674, 2105
Aor13HI TCCGGA 1 cut(s) 1837
AoxI GGCC 6 cut(s) 224, 682, 965, 1516, 1852, 2241
ApeKI GCWGC 4 cut(s) 73, 76, 598, 1769
ApoI RAATTY 4 cut(s) 188, 1399, 2116, 2175
AseI ATTAAT 1 cut(s) 1710
AsiGI ACCGGT 1 cut(s) 1507
Asp700I GAANNNNTTC 1 cut(s) 1920
Asp718I GGTACC 1 cut(s) 900
AspA2I CCTAGG 1 cut(s) 833
AspS9I GGNCC 3 cut(s) 370, 1388, 1517
AsuC2I CCSGG 2 cut(s) 1322, 1629
AsuHPI GGTGA 8 cut(s) 451, 461, 725, 1064, 1260, 2032, 2093, 2162
AsuNHI GCTAGC 1 cut(s) 4
AvaI CYCGRG 2 cut(s) 674, 2105
AvaII GGWCC 2 cut(s) 370, 1388
AvrII CCTAGG 1 cut(s) 833
BaeGI GKGCMC 1 cut(s) 1677
BalI TGGCCA 1 cut(s) 2243
BanI GGYRCC 2 cut(s) 900, 2098
BanII GRGCYC 1 cut(s) 107
BauI CACGAG 2 cut(s) 180, 1742
BbsI GAAGAC 1 cut(s) 1554
BbvCI CCTCAGC 1 cut(s) 1326
BbvI GCAGC 4 cut(s) 85, 88, 610, 1781
BceAI ACGGC 3 cut(s) 980, 1203, 1867
BciT130I CCWGG 5 cut(s) 463, 987, 1071, 1392, 1728
BciVI GTATCC 2 cut(s) 498, 1981
BclI TGATCA 1 cut(s) 67
BcnI CCSGG 2 cut(s) 1322, 1629
BcoDI GTCTC 9 cut(s) 254, 279, 391, 677, 720, 1351, 1447, 1617, 2132
BfaI CTAG 4 cut(s) 5, 834, 1974, 2004
BfmI CTRYAG 1 cut(s) 1542
BfrI CTTAAG 1 cut(s) 347
BfuAI ACCTGC 2 cut(s) 735, 2047
BfuI GTATCC 2 cut(s) 498, 1981
BisI GCNGC 7 cut(s) 74, 77, 227, 339, 599, 968, 1770
BlnI CCTAGG 1 cut(s) 833
BlsI GCNGC 7 cut(s) 75, 78, 228, 340, 600, 969, 1771
BmcAI AGTACT 1 cut(s) 2287
Bme1390I CCNGG 7 cut(s) 463, 987, 1071, 1322, 1392, 1629, 1728
Bme18I GGWCC 2 cut(s) 370, 1388
BmeT110I CYCGRG 2 cut(s) 674, 2105
BmgBI CACGTC 3 cut(s) 1441, 1492, 1634
BmgT120I GGNCC 3 cut(s) 370, 1388, 1517
BmiI GGNNCC 6 cut(s) 242, 508, 583, 902, 1302, 2100
BmrFI CCNGG 7 cut(s) 463, 987, 1071, 1322, 1392, 1629, 1728
BmrI ACTGGG 1 cut(s) 1601
BmsI GCATC 5 cut(s) 547, 739, 847, 1675, 1697
BmtI GCTAGC 1 cut(s) 8
BmuI ACTGGG 1 cut(s) 1601
BpiI GAAGAC 1 cut(s) 1554
BpmI CTGGAG 1 cut(s) 1896
Bpu10I CCTNAGC 3 cut(s) 467, 689, 1326
BpuEI CTTGAG 2 cut(s) 64, 2114
BpuMI CCSGG 2 cut(s) 1322, 1629
BsaAI YACGTR 1 cut(s) 1528
BsaBI GATNNNNATC 1 cut(s) 1434
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 5 cut(s) 221, 809, 833, 1234, 1552
BsaWI WCCGGW 4 cut(s) 206, 361, 1507, 1837
BsaXI ACNNNNNCTCC 4 cut(s) 1584, 1614, 2022, 2052
Bse118I RCCGGY 1 cut(s) 1507
Bse1I ACTGG 2 cut(s) 1360, 1607
Bse3DI GCAATG 1 cut(s) 1764
Bse8I GATNNNNATC 1 cut(s) 1434
BseAI TCCGGA 1 cut(s) 1837
BseBI CCWGG 5 cut(s) 463, 987, 1071, 1392, 1728
BseDI CCNNGG 5 cut(s) 221, 809, 833, 1234, 1552
BseGI GGATG 6 cut(s) 175, 238, 370, 532, 1435, 1688
BseJI GATNNNNATC 1 cut(s) 1434
BseMI GCAATG 1 cut(s) 1764
BseMII CTCAG 5 cut(s) 481, 1239, 1317, 1750, 2205
BseNI ACTGG 2 cut(s) 1360, 1607
BseRI GAGGAG 6 cut(s) 27, 314, 499, 559, 1605, 2273
BseSI GKGCMC 1 cut(s) 1677
BseX3I CGGCCG 2 cut(s) 224, 965
BseXI GCAGC 4 cut(s) 85, 88, 610, 1781
BseYI CCCAGC 1 cut(s) 1469
BsgI GTGCAG 1 cut(s) 879
Bsh1236I CGCG 1 cut(s) 22
Bsh1285I CGRYCG 4 cut(s) 227, 968, 1372, 1508
BshFI GGCC 6 cut(s) 226, 684, 967, 1518, 1854, 2243
BshNI GGYRCC 2 cut(s) 900, 2098
BshTI ACCGGT 1 cut(s) 1507
BsiEI CGRYCG 4 cut(s) 227, 968, 1372, 1508
BsiHKCI CYCGRG 2 cut(s) 674, 2105
BsiSI CCGG 6 cut(s) 207, 362, 1321, 1508, 1628, 1838
BslFI GGGAC 2 cut(s) 595, 1644
BsmAI GTCTC 9 cut(s) 254, 279, 391, 677, 720, 1351, 1447, 1617, 2132
BsmBI CGTCTC 1 cut(s) 1447
BsmFI GGGAC 2 cut(s) 595, 1644
BsmI GAATGC 1 cut(s) 951
BsnI GGCC 6 cut(s) 226, 684, 967, 1518, 1854, 2243
BsoBI CYCGRG 2 cut(s) 674, 2105
Bsp1286I GDGCHC 2 cut(s) 107, 1677
Bsp13I TCCGGA 1 cut(s) 1837
Bsp143I GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
Bsp19I CCATGG 2 cut(s) 809, 1234
BspACI CCGC 4 cut(s) 227, 338, 341, 968
BspANI GGCC 6 cut(s) 226, 684, 967, 1518, 1854, 2243
BspCNI CTCAG 5 cut(s) 480, 1240, 1318, 1749, 2206
BspEI TCCGGA 1 cut(s) 1837
BspFNI CGCG 1 cut(s) 22
BspHI TCATGA 3 cut(s) 538, 1498, 1888
BspLI GGNNCC 6 cut(s) 242, 508, 583, 902, 1302, 2100
BspMI ACCTGC 2 cut(s) 735, 2047
BspOI GCTAGC 1 cut(s) 8
BspPI GGATC 2 cut(s) 543, 2166
BspT107I GGYRCC 2 cut(s) 900, 2098
BspTI CTTAAG 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 1764
BsrFI RCCGGY 1 cut(s) 1507
BsrI ACTGG 2 cut(s) 1360, 1607
BssAI RCCGGY 1 cut(s) 1507
BssECI CCNNGG 5 cut(s) 221, 809, 833, 1234, 1552
BssMI GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
BssNI GRCGYC 1 cut(s) 378
BssSI CACGAG 2 cut(s) 180, 1742
BssT1I CCWWGG 3 cut(s) 809, 833, 1234
Bst2BI CACGAG 2 cut(s) 180, 1742
Bst2UI CCWGG 5 cut(s) 463, 987, 1071, 1392, 1728
Bst4CI ACNGT 7 cut(s) 654, 900, 905, 1008, 1112, 1127, 1553
Bst6I CTCTTC 1 cut(s) 420
BstACI GRCGYC 1 cut(s) 378
BstAFI CTTAAG 1 cut(s) 347
BstAPI GCANNNNNTGC 2 cut(s) 35, 1672
BstBAI YACGTR 1 cut(s) 1528
BstC8I GCNNGC 3 cut(s) 6, 40, 1516
BstDEI CTNAG 6 cut(s) 467, 689, 1248, 1326, 1736, 2214
BstDSI CCRYGG 3 cut(s) 809, 1234, 1552
BstENI CCTNNNNNAGG 2 cut(s) 750, 2007
BstF5I GGATG 6 cut(s) 175, 238, 370, 532, 1435, 1688
BstFNI CGCG 1 cut(s) 22
BstKTI GATC 6 cut(s) 70, 538, 637, 1340, 1372, 2161
BstMAI GTCTC 9 cut(s) 254, 279, 391, 677, 720, 1351, 1447, 1617, 2132
BstMBI GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
BstMCI CGRYCG 4 cut(s) 227, 968, 1372, 1508
BstMWI GCNNNNNNNGC 5 cut(s) 35, 226, 690, 1331, 1672
BstNI CCWGG 5 cut(s) 463, 987, 1071, 1392, 1728
BstNSI RCATGY 4 cut(s) 42, 1209, 1346, 1625
BstSCI CCNGG 7 cut(s) 461, 985, 1069, 1320, 1390, 1627, 1726
BstSFI CTRYAG 1 cut(s) 1542
BstSLI GKGCMC 1 cut(s) 1677
BstUI CGCG 1 cut(s) 22
BstV1I GCAGC 4 cut(s) 85, 88, 610, 1781
BstV2I GAAGAC 1 cut(s) 1554
BstXI CCANNNNNNTGG 3 cut(s) 421, 503, 1712
BstZI CGGCCG 2 cut(s) 224, 965
BsuI GTATCC 2 cut(s) 498, 1981
BsuRI GGCC 6 cut(s) 226, 684, 967, 1518, 1854, 2243
BtgI CCRYGG 3 cut(s) 809, 1234, 1552
BtgZI GCGATG 1 cut(s) 1785
BtrI CACGTC 3 cut(s) 1441, 1492, 1634
BtsCI GGATG 6 cut(s) 175, 238, 370, 532, 1435, 1688
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 4 cut(s) 111, 1117, 1123, 1614
BveI ACCTGC 2 cut(s) 735, 2047
Cac8I GCNNGC 3 cut(s) 6, 40, 1516
CaiI CAGNNNCTG 1 cut(s) 1116
CciI TCATGA 3 cut(s) 538, 1498, 1888
Cfr10I RCCGGY 1 cut(s) 1507
Cfr13I GGNCC 3 cut(s) 370, 1388, 1517
CseI GACGC 1 cut(s) 386
Csp6I GTAC 4 cut(s) 352, 901, 1529, 2286
CspAI ACCGGT 1 cut(s) 1507
CspCI CAANNNNNGTGG 2 cut(s) 1293, 1328
CviQI GTAC 4 cut(s) 352, 901, 1529, 2286
DdeI CTNAG 6 cut(s) 467, 689, 1248, 1326, 1736, 2214
DpnI GATC 6 cut(s) 69, 537, 636, 1339, 1371, 2160
DpnII GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
DraIII CACNNNGTG 1 cut(s) 1672
DrdI GACNNNNNNGTC 1 cut(s) 383
DseDI GACNNNNNNGTC 1 cut(s) 383
EaeI YGGCCR 4 cut(s) 224, 965, 1852, 2241
EagI CGGCCG 2 cut(s) 224, 965
Eam1104I CTCTTC 1 cut(s) 420
EarI CTCTTC 1 cut(s) 420
EclXI CGGCCG 2 cut(s) 224, 965
Eco130I CCWWGG 3 cut(s) 809, 833, 1234
Eco24I GRGCYC 1 cut(s) 107
Eco32I GATATC 2 cut(s) 708, 1733
Eco47I GGWCC 2 cut(s) 370, 1388
Eco52I CGGCCG 2 cut(s) 224, 965
Eco57I CTGAAG 2 cut(s) 609, 972
Eco88I CYCGRG 2 cut(s) 674, 2105
EcoNI CCTNNNNNAGG 2 cut(s) 750, 2007
EcoO109I RGGNCCY 1 cut(s) 370
EcoRII CCWGG 5 cut(s) 461, 985, 1069, 1390, 1726
EcoRV GATATC 2 cut(s) 708, 1733
EcoT14I CCWWGG 3 cut(s) 809, 833, 1234
EcoT22I ATGCAT 1 cut(s) 1690
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 3 cut(s) 809, 833, 1234
Esp3I CGTCTC 1 cut(s) 1447
FalI AAGNNNNNCTT 2 cut(s) 1049, 1081
FaqI GGGAC 2 cut(s) 595, 1644
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 7 cut(s) 74, 77, 227, 339, 599, 968, 1770
FokI GGATG 6 cut(s) 162, 245, 377, 539, 1442, 1675
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 7 cut(s) 74, 77, 227, 339, 599, 968, 1770
FspBI CTAG 4 cut(s) 5, 834, 1974, 2004
GluI GCNGC 7 cut(s) 74, 77, 227, 339, 599, 968, 1770
GsaI CCCAGC 1 cut(s) 1473
GsuI CTGGAG 1 cut(s) 1896
HaeIII GGCC 6 cut(s) 226, 684, 967, 1518, 1854, 2243
HapII CCGG 6 cut(s) 207, 362, 1321, 1508, 1628, 1838
HgaI GACGC 1 cut(s) 386
Hin1I GRCGYC 1 cut(s) 378
HindIII AAGCTT 2 cut(s) 1857, 2183
HinfI GANTC 9 cut(s) 50, 608, 814, 854, 976, 1262, 1285, 1783, 1796
HpaII CCGG 6 cut(s) 207, 362, 1321, 1508, 1628, 1838
HphI GGTGA 8 cut(s) 451, 461, 725, 1064, 1260, 2032, 2093, 2162
Hpy166II GTNNAC 5 cut(s) 91, 1121, 1531, 1603, 2000
Hpy188I TCNGA 9 cut(s) 55, 245, 586, 940, 1015, 1477, 1739, 1782, 2050
Hpy8I GTNNAC 5 cut(s) 91, 1121, 1531, 1603, 2000
HpyAV CCTTC 7 cut(s) 117, 326, 1097, 1801, 2003, 2007, 2029
HpyCH4III ACNGT 7 cut(s) 654, 900, 905, 1008, 1112, 1127, 1553
HpyCH4IV ACGT 4 cut(s) 1440, 1491, 1527, 1633
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 226, 690, 1331, 1672
HpyF3I CTNAG 6 cut(s) 467, 689, 1248, 1326, 1736, 2214
HpySE526I ACGT 4 cut(s) 1440, 1491, 1527, 1633
Hsp92I GRCGYC 1 cut(s) 378
Kpn2I TCCGGA 1 cut(s) 1837
KpnI GGTACC 1 cut(s) 904
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
LmnI GCTCC 6 cut(s) 246, 322, 512, 811, 1040, 1705
Lsp1109I GCAGC 4 cut(s) 85, 88, 610, 1781
LweI GCATC 5 cut(s) 547, 739, 847, 1675, 1697
MaeI CTAG 4 cut(s) 5, 834, 1974, 2004
MaeII ACGT 4 cut(s) 1440, 1491, 1527, 1633
MaeIII GTNAC 4 cut(s) 409, 1073, 1238, 2150
MalI GATC 6 cut(s) 69, 537, 636, 1339, 1371, 2160
MboI GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
MboII GAAGA 6 cut(s) 437, 965, 1257, 1559, 1565, 2153
MfeI CAATTG 1 cut(s) 63
MhlI GDGCHC 2 cut(s) 107, 1677
MlsI TGGCCA 1 cut(s) 2243
MluNI TGGCCA 1 cut(s) 2243
MlyI GAGTC 3 cut(s) 59, 617, 823
MmeI TCCRAC 3 cut(s) 33, 902, 1965
Mox20I TGGCCA 1 cut(s) 2243
Mph1103I ATGCAT 1 cut(s) 1690
MroI TCCGGA 1 cut(s) 1837
MroXI GAANNNNTTC 1 cut(s) 1920
MscI TGGCCA 1 cut(s) 2243
MseI TTAA 5 cut(s) 186, 348, 572, 1710, 2326
MslI CAYNNNNRTG 2 cut(s) 180, 1620
Msp20I TGGCCA 1 cut(s) 2243
MspCI CTTAAG 1 cut(s) 347
MspI CCGG 6 cut(s) 207, 362, 1321, 1508, 1628, 1838
MspR9I CCNGG 7 cut(s) 463, 987, 1071, 1322, 1392, 1629, 1728
MunI CAATTG 1 cut(s) 63
Mva1269I GAATGC 1 cut(s) 951
MvaI CCWGG 5 cut(s) 463, 987, 1071, 1392, 1728
MvnI CGCG 1 cut(s) 22
MwoI GCNNNNNNNGC 5 cut(s) 35, 226, 690, 1331, 1672
NciI CCSGG 2 cut(s) 1322, 1629
NcoI CCATGG 2 cut(s) 809, 1234
NdeII GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
NheI GCTAGC 1 cut(s) 4
NlaIV GGNNCC 6 cut(s) 242, 508, 583, 902, 1302, 2100
NmeAIII GCCGAG 1 cut(s) 202
NmuCI GTSAC 2 cut(s) 409, 2150
NsiI ATGCAT 1 cut(s) 1690
NspI RCATGY 4 cut(s) 42, 1209, 1346, 1625
PaeI GCATGC 1 cut(s) 42
PaeR7I CTCGAG 2 cut(s) 674, 2105
PagI TCATGA 3 cut(s) 538, 1498, 1888
PciI ACATGT 2 cut(s) 1205, 1342
PctI GAATGC 1 cut(s) 951
PdmI GAANNNNTTC 1 cut(s) 1920
PfeI GAWTC 6 cut(s) 854, 976, 1262, 1285, 1783, 1796
PfoI TCCNGGA 1 cut(s) 1726
PinAI ACCGGT 1 cut(s) 1507
PkrI GCNGC 7 cut(s) 75, 78, 228, 340, 600, 969, 1771
Ple19I CGATCG 1 cut(s) 1372
PleI GAGTC 3 cut(s) 58, 616, 822
PpsI GAGTC 3 cut(s) 58, 616, 822
Ppu21I YACGTR 1 cut(s) 1528
PpuMI RGGWCCY 1 cut(s) 370
PscI ACATGT 2 cut(s) 1205, 1342
PshBI ATTAAT 1 cut(s) 1710
PsiI TTATAA 2 cut(s) 723, 2063
Psp5II RGGWCCY 1 cut(s) 370
Psp6I CCWGG 5 cut(s) 461, 985, 1069, 1390, 1726
PspFI CCCAGC 1 cut(s) 1469
PspGI CCWGG 5 cut(s) 461, 985, 1069, 1390, 1726
PspN4I GGNNCC 6 cut(s) 242, 508, 583, 902, 1302, 2100
PspPI GGNCC 3 cut(s) 370, 1388, 1517
PspPPI RGGWCCY 1 cut(s) 370
PsrI GAACNNNNNNTAC 2 cut(s) 1358, 1390
PstNI CAGNNNCTG 1 cut(s) 1116
PvuI CGATCG 1 cut(s) 1372
RsaI GTAC 4 cut(s) 353, 902, 1530, 2287
RsaNI GTAC 4 cut(s) 352, 901, 1529, 2286
RseI CAYNNNNRTG 2 cut(s) 180, 1620
SaqAI TTAA 5 cut(s) 186, 348, 572, 1710, 2326
SatI GCNGC 7 cut(s) 74, 77, 227, 339, 599, 968, 1770
Sau3AI GATC 6 cut(s) 67, 535, 634, 1337, 1369, 2158
Sau96I GGNCC 3 cut(s) 370, 1388, 1517
ScaI AGTACT 1 cut(s) 2287
SchI GAGTC 3 cut(s) 59, 617, 823
ScrFI CCNGG 7 cut(s) 463, 987, 1071, 1322, 1392, 1629, 1728
SduI GDGCHC 2 cut(s) 107, 1677
SfaNI GCATC 5 cut(s) 547, 739, 847, 1675, 1697
SfcI CTRYAG 1 cut(s) 1542
Sfr274I CTCGAG 2 cut(s) 674, 2105
SinI GGWCC 2 cut(s) 370, 1388
SlaI CTCGAG 2 cut(s) 674, 2105
SmiMI CAYNNNNRTG 2 cut(s) 180, 1620
SmlI CTYRAG 6 cut(s) 43, 347, 674, 2105, 2129, 2318
SmoI CTYRAG 6 cut(s) 43, 347, 674, 2105, 2129, 2318
SphI GCATGC 1 cut(s) 42
SsiI CCGC 4 cut(s) 227, 338, 341, 968
SspMI CTAG 4 cut(s) 5, 834, 1974, 2004
StyD4I CCNGG 7 cut(s) 461, 985, 1069, 1320, 1390, 1627, 1726
StyI CCWWGG 3 cut(s) 809, 833, 1234
TaaI ACNGT 7 cut(s) 654, 900, 905, 1008, 1112, 1127, 1553
TaiI ACGT 4 cut(s) 1443, 1494, 1530, 1636
TaqI TCGA 5 cut(s) 675, 1101, 1161, 1561, 2106
TaqII GACCGA 1 cut(s) 1518
TatI WGTACW 1 cut(s) 2285
TauI GCSGC 3 cut(s) 229, 341, 970
TfiI GAWTC 6 cut(s) 854, 976, 1262, 1285, 1783, 1796
Tru1I TTAA 5 cut(s) 186, 348, 572, 1710, 2326
Tru9I TTAA 5 cut(s) 186, 348, 572, 1710, 2326
TscAI CASTG 4 cut(s) 118, 1117, 1130, 1614
TseFI GTSAC 2 cut(s) 409, 2150
TseI GCWGC 4 cut(s) 73, 76, 598, 1769
Tsp45I GTSAC 2 cut(s) 409, 2150
TspGWI ACGGA 4 cut(s) 280, 474, 1602, 1839
TspRI CASTG 4 cut(s) 118, 1117, 1130, 1614
Vha464I CTTAAG 1 cut(s) 347
VpaK11BI GGWCC 2 cut(s) 370, 1388
VspI ATTAAT 1 cut(s) 1710
XagI CCTNNNNNAGG 2 cut(s) 750, 2007
XapI RAATTY 4 cut(s) 188, 1399, 2116, 2175
XceI RCATGY 4 cut(s) 42, 1209, 1346, 1625
XcmI CCANNNNNNNNNTGG 1 cut(s) 1466
XhoI CTCGAG 2 cut(s) 674, 2105
XmaJI CCTAGG 1 cut(s) 833
XmiI GTMKAC 1 cut(s) 90
XmnI GAANNNNTTC 1 cut(s) 1920
XspI CTAG 4 cut(s) 5, 834, 1974, 2004
ZrmI AGTACT 1 cut(s) 2287
Zsp2I ATGCAT 1 cut(s) 1690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.