Rorug04G0041100

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0005070
Physical Location & Seq
Forward (+)
6408499 .. 6410452
1954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0041100.1

Sequence Viewer

Length: 1695 bp
ATGGCGGTTCATCACGAAGAACCCACATCGACTTCAAGAAAGCTCCACTTCCCTCTTGACTCCTCCGCCTACCAAATCCTCGGCGAGATCGGCTCCGGCGTCAGCGCCGTCGTCTACAAAGCCCTCTGCCCCTCCGTCAACTCCGCCGTGGTCGCCATCAAATCCATCGACCTCGACCGCTCCCGCTCCGACTTCGACGCCTTCCGCCGCGAGACCAAAACGATGTCGCTTCTCTCCCACCCCAACATCCTCTCCGCCCACTGCTCCTTCACCGTCGACCGCAGCCTCTGGGTCGTCATGCCCTTCATGTCCGCCGGCTCCATCCAGTCCGTCATCTCCTCCTCCTTCCCAAACGGCATGTCGGAGCCCTGCATTGCCGTCATCCTCAAGGAAACCCTAAACGCCCTGTCGTATCTCCACGACCAGGGCCACCTCCACCGCGACATCAAGGCCAGCAACATCCTCATGGACTCCGACGGCTCCGTAAAGCTCGCCGACTTCGGCGTCTCCGCCTCGGTCTACGAGCCCAACTACCTCAACTCCAACTCCTCCTCCAAAACGTCGTCGTTTCGCCTCACCGACGTCGCCGGCACGCCGTACTGGATGGCTCCGGAAGTCGTGCACTCGCACAACGGCTACGGCTGCAAAGCCGACATCTGGTCTCTCGGGATCACCGCCCTCGAGCTGGCCCACGGCGGGCCGCCGCTGTCGCATCTCCCGCCGTCGAAGTCGCTGCTTCTGCGGATCACGAAGCGGTTCAACTTCTCGGATTACGAGACGCGCGGCGGTACGGACAAGAACAAGAGCAAGAAGTTCTCGAAGAGCTTCAAGGACTTGGTGGGCCTGTGTTTGGATCAAGACCCGAACAAGAGGCCCAACGCCGAGAAGCTTCTGAAGCACTCGTTTTTCAAGAACTGTAAAGGGGTTGATTTTCTGGCCAAGAATCTGCTGAATGGGCTGTCTAGTGTGGAAGAGAGGTTTAGGGTTTTGGGTGGCGTGTTGAGCAAGAATGAGGAAGATGAAGATGAAGATGATGATGATGATGATGATGATGAATCGGCGAGGGCGAGGGTTAGGAATCGGAGAATTAGTGGGTGGAATTTCAATGAGGATGGGCTTGATCTTCACCCAGTATTCCCAACTGAGTCAGGCAGCGATTCCGGTGGCAACTCAGTGTTTCCGACCGAGTCAAGTAGCGAGTCGGTTGGCAAGATGGTTCGGTTCAGCGGCGAAACTATCATTAGGTTGTCAAGTGAGTCGCACGAGTCGTATCTGAGTTCACCAGGTCGTGTTGTGGAGGAGGAGGGGGCCCATTTGGTGAGAGGAGATGAGTCAGGAGAGTCAATGGAGTCGAATCTGAGTTCACTTGTGGGTGTGCAGAGTCGGTATGGGGGTGTGGATAGTAATGCTGGGGGTGTTGATAGGGAGGCCATGGTGAGTGGGCTGACGGCGTTTATGAGGAGTTTGGATGAGCAGAGGAGCAATGTGGTGACTCTGATTGGTCTGTTGCGTGGGGAGGAAGTTGGGGAGGTGATGCTGAGCAGAGAGGAGCAGATGGGTCAAGTCATTGAGAGGATGAGAGTGGAGTTGGAAAATGAGAGGGAGAGGAATTTTCAGTTGGAGATGGAGTTGGAGTTTCTGAGGATTCAGATTTCTGGTGCTTACACAAGTACTAGTGCTGGTAGTATTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1 Pkinase_Tyr

Protein Analysis

564

Amino Acids

61.95

Weight (kDa)

5.17

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 24 - 303 1.1e-58 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 27 - 299 7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 503
AatII GACGTC 1 cut(s) 585
AccBSI CCGCTC 2 cut(s) 180, 186
AccI GTMKAC 3 cut(s) 114, 276, 519
AccII CGCG 4 cut(s) 210, 441, 781, 783
AccIII TCCGGA 1 cut(s) 610
AclWI GGATC 3 cut(s) 677, 752, 861
AcoI YGGCCR 1 cut(s) 936
AcsI RAATTY 2 cut(s) 1099, 1609
AcuI CTGAAG 1 cut(s) 914
AcyI GRCGYC 4 cut(s) 99, 198, 504, 582
AfaI GTAC 3 cut(s) 599, 790, 1672
AfiI CCNNNNNNNGG 5 cut(s) 424, 657, 685, 696, 850
AgsI TTSAA 5 cut(s) 36, 760, 829, 910, 1105
AhdI GACNNNNNGTC 1 cut(s) 658
AhlI ACTAGT 1 cut(s) 1673
AjnI CCWGG 2 cut(s) 423, 1282
AjuI GAANNNNNNNTTGG 2 cut(s) 1601, 1633
AluBI AGCT 5 cut(s) 43, 490, 685, 825, 889
AluI AGCT 5 cut(s) 43, 490, 685, 825, 889
Alw21I GWGCWC 1 cut(s) 624
Alw26I GTCTC 4 cut(s) 206, 511, 666, 770
Alw44I GTGCAC 1 cut(s) 620
AlwI GGATC 3 cut(s) 677, 752, 861
AlwNI CAGNNNCTG 1 cut(s) 288
Ama87I CYCGRG 2 cut(s) 665, 680
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 9 cut(s) 427, 450, 687, 698, 841, 872, 936, 1308, 1428
ApaI GGGCCC 1 cut(s) 1312
ApaLI GTGCAC 1 cut(s) 620
ApeKI GCWGC 4 cut(s) 282, 642, 733, 1152
ApoI RAATTY 2 cut(s) 1099, 1609
ArsI GACNNNNNNTTYG 2 cut(s) 344, 376
Asp700I GAANNNNTTC 2 cut(s) 755, 824
AspLEI GCGC 2 cut(s) 107, 783
AspS9I GGNCC 7 cut(s) 427, 688, 698, 841, 873, 1308, 1309
AsuHPI GGTGA 9 cut(s) 262, 568, 664, 1118, 1272, 1330, 1447, 1501, 1543
AvaI CYCGRG 2 cut(s) 665, 680
BaeGI GKGCMC 2 cut(s) 624, 1312
BalI TGGCCA 1 cut(s) 938
BanII GRGCYC 3 cut(s) 369, 528, 1312
BauI CACGAG 1 cut(s) 1262
Bbv12I GWGCWC 1 cut(s) 624
BbvI GCAGC 4 cut(s) 294, 629, 720, 1164
BccI CCATC 8 cut(s) 164, 173, 329, 598, 1106, 1207, 1549, 1618
BcgI CGANNNNNNTGC 2 cut(s) 715, 749
BciT130I CCWGG 2 cut(s) 425, 1284
BcoDI GTCTC 4 cut(s) 206, 511, 666, 770
BcuI ACTAGT 1 cut(s) 1673
BfaI CTAG 2 cut(s) 963, 1674
BfoI RGCGCY 1 cut(s) 108
BisI GCNGC 9 cut(s) 208, 283, 643, 701, 704, 734, 784, 1153, 1228
BlpI GCTNAGC 1 cut(s) 1538
BlsI GCNGC 9 cut(s) 209, 284, 644, 702, 705, 735, 785, 1154, 1229
BmcAI AGTACT 1 cut(s) 1672
Bme1390I CCNGG 2 cut(s) 425, 1284
BmeRI GACNNNNNGTC 1 cut(s) 658
BmeT110I CYCGRG 2 cut(s) 665, 680
BmgT120I GGNCC 7 cut(s) 427, 688, 698, 841, 873, 1308, 1309
BmiI GGNNCC 7 cut(s) 94, 319, 366, 481, 609, 1309, 1310
BmrFI CCNGG 2 cut(s) 425, 1284
BmrI ACTGGG 1 cut(s) 1124
BmsI GCATC 2 cut(s) 721, 1524
BmuI ACTGGG 1 cut(s) 1124
BplI GAGNNNNNCTC 2 cut(s) 77, 109
Bpu1102I GCTNAGC 1 cut(s) 1538
BpuEI CTTGAG 1 cut(s) 371
BsaHI GRCGYC 4 cut(s) 99, 198, 504, 582
BsaI GGTCTC 2 cut(s) 206, 666
BsaJI CCNNGG 6 cut(s) 79, 147, 424, 513, 691, 1431
BsaWI WCCGGW 2 cut(s) 610, 1160
Bsc4I CCNNNNNNNGG 5 cut(s) 424, 657, 685, 696, 850
Bse118I RCCGGY 2 cut(s) 314, 587
Bse1I ACTGG 3 cut(s) 325, 605, 1130
Bse3DI GCAATG 2 cut(s) 372, 1489
BseAI TCCGGA 1 cut(s) 610
BseBI CCWGG 2 cut(s) 425, 1284
BseDI CCNNGG 6 cut(s) 79, 147, 424, 513, 691, 1431
BseGI GGATG 8 cut(s) 246, 321, 381, 459, 609, 1117, 1474, 1581
BseLI CCNNNNNNNGG 5 cut(s) 424, 657, 685, 696, 850
BseMI GCAATG 2 cut(s) 372, 1489
BseMII CTCAG 6 cut(s) 1134, 1185, 1265, 1349, 1529, 1631
BseNI ACTGG 3 cut(s) 325, 605, 1130
BseSI GKGCMC 2 cut(s) 624, 1312
BseXI GCAGC 4 cut(s) 294, 629, 720, 1164
BseYI CCCAGC 1 cut(s) 1409
BsgI GTGCAG 1 cut(s) 1397
Bsh1236I CGCG 4 cut(s) 210, 441, 781, 783
Bsh1285I CGRYCG 3 cut(s) 178, 280, 1185
BshFI GGCC 9 cut(s) 429, 452, 689, 700, 843, 874, 938, 1310, 1430
BsiEI CGRYCG 3 cut(s) 178, 280, 1185
BsiHKAI GWGCWC 1 cut(s) 624
BsiHKCI CYCGRG 2 cut(s) 665, 680
BsiSI CCGG 5 cut(s) 96, 315, 588, 611, 1161
BslI CCNNNNNNNGG 5 cut(s) 424, 657, 685, 696, 850
BsmAI GTCTC 4 cut(s) 206, 511, 666, 770
BsmBI CGTCTC 2 cut(s) 511, 770
BsnI GGCC 9 cut(s) 429, 452, 689, 700, 843, 874, 938, 1310, 1430
Bso31I GGTCTC 2 cut(s) 206, 666
BsoBI CYCGRG 2 cut(s) 665, 680
Bsp120I GGGCCC 1 cut(s) 1308
Bsp1286I GDGCHC 4 cut(s) 369, 528, 624, 1312
Bsp13I TCCGGA 1 cut(s) 610
Bsp143I GATC 5 cut(s) 87, 669, 744, 853, 1120
Bsp1720I GCTNAGC 1 cut(s) 1538
Bsp19I CCATGG 1 cut(s) 1431
BspANI GGCC 9 cut(s) 429, 452, 689, 700, 843, 874, 938, 1310, 1430
BspCNI CTCAG 6 cut(s) 1135, 1184, 1266, 1350, 1530, 1632
BspEI TCCGGA 1 cut(s) 610
BspFNI CGCG 4 cut(s) 210, 441, 781, 783
BspLI GGNNCC 7 cut(s) 94, 319, 366, 481, 609, 1309, 1310
BspPI GGATC 3 cut(s) 677, 752, 861
BspQI GCTCTTC 1 cut(s) 815
BspTNI GGTCTC 2 cut(s) 206, 666
BsrBI CCGCTC 2 cut(s) 180, 186
BsrDI GCAATG 2 cut(s) 372, 1489
BsrFI RCCGGY 2 cut(s) 314, 587
BsrI ACTGG 3 cut(s) 325, 605, 1130
BssAI RCCGGY 2 cut(s) 314, 587
BssECI CCNNGG 6 cut(s) 79, 147, 424, 513, 691, 1431
BssMI GATC 5 cut(s) 87, 669, 744, 853, 1120
BssNI GRCGYC 4 cut(s) 99, 198, 504, 582
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 1 cut(s) 1431
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 2 cut(s) 425, 1284
Bst4CI ACNGT 2 cut(s) 274, 917
Bst6I CTCTTC 2 cut(s) 815, 966
BstACI GRCGYC 4 cut(s) 99, 198, 504, 582
BstC8I GCNNGC 7 cut(s) 316, 454, 492, 589, 593, 687, 698
BstDEI CTNAG 6 cut(s) 1143, 1171, 1274, 1358, 1538, 1640
BstDSI CCRYGG 3 cut(s) 147, 691, 1431
BstF5I GGATG 8 cut(s) 246, 321, 381, 459, 609, 1117, 1474, 1581
BstFNI CGCG 4 cut(s) 210, 441, 781, 783
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 2 cut(s) 107, 783
BstKTI GATC 5 cut(s) 90, 672, 747, 856, 1123
BstMAI GTCTC 4 cut(s) 206, 511, 666, 770
BstMBI GATC 5 cut(s) 87, 669, 744, 853, 1120
BstMCI CGRYCG 3 cut(s) 178, 280, 1185
BstMWI GCNNNNNNNGC 9 cut(s) 90, 152, 642, 709, 718, 739, 895, 955, 1002
BstNI CCWGG 2 cut(s) 425, 1284
BstNSI RCATGY 1 cut(s) 361
BstSCI CCNGG 2 cut(s) 423, 1282
BstSLI GKGCMC 2 cut(s) 624, 1312
BstUI CGCG 4 cut(s) 210, 441, 781, 783
BstV1I GCAGC 4 cut(s) 294, 629, 720, 1164
BsuRI GGCC 9 cut(s) 429, 452, 689, 700, 843, 874, 938, 1310, 1430
BtgI CCRYGG 3 cut(s) 147, 691, 1431
BtsCI GGATG 8 cut(s) 246, 321, 381, 459, 609, 1117, 1474, 1581
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 2 cut(s) 259, 1179
Cac8I GCNNGC 7 cut(s) 316, 454, 492, 589, 593, 687, 698
CaiI CAGNNNCTG 1 cut(s) 288
CfoI GCGC 2 cut(s) 107, 783
Cfr10I RCCGGY 2 cut(s) 314, 587
Cfr13I GGNCC 7 cut(s) 427, 688, 698, 841, 873, 1308, 1309
CseI GACGC 4 cut(s) 88, 206, 493, 787
CsiI ACCWGGT 1 cut(s) 1282
Csp6I GTAC 3 cut(s) 598, 789, 1671
CviAII CATG 5 cut(s) 298, 307, 358, 466, 1432
CviQI GTAC 3 cut(s) 598, 789, 1671
DdeI CTNAG 6 cut(s) 1143, 1171, 1274, 1358, 1538, 1640
DpnI GATC 5 cut(s) 89, 671, 746, 855, 1122
DpnII GATC 5 cut(s) 87, 669, 744, 853, 1120
DrdI GACNNNNNNGTC 1 cut(s) 503
DriI GACNNNNNGTC 1 cut(s) 658
DseDI GACNNNNNNGTC 1 cut(s) 503
EaeI YGGCCR 1 cut(s) 936
Eam1104I CTCTTC 2 cut(s) 815, 966
Eam1105I GACNNNNNGTC 1 cut(s) 658
EarI CTCTTC 2 cut(s) 815, 966
EciI GGCGGA 6 cut(s) 55, 133, 194, 244, 301, 499
Eco130I CCWWGG 1 cut(s) 1431
Eco24I GRGCYC 3 cut(s) 369, 528, 1312
Eco31I GGTCTC 2 cut(s) 206, 666
Eco57I CTGAAG 1 cut(s) 914
Eco88I CYCGRG 2 cut(s) 665, 680
EcoO109I RGGNCCY 1 cut(s) 1308
EcoRII CCWGG 2 cut(s) 423, 1282
EcoT14I CCWWGG 1 cut(s) 1431
EcoT38I GRGCYC 3 cut(s) 369, 528, 1312
ErhI CCWWGG 1 cut(s) 1431
Esp3I CGTCTC 2 cut(s) 511, 770
FaeI CATG 5 cut(s) 301, 310, 361, 469, 1435
FaiI YATR 7 cut(s) 299, 308, 359, 467, 1389, 1433, 1457
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FatI CATG 5 cut(s) 297, 306, 357, 465, 1431
FauI CCCGC 3 cut(s) 191, 689, 726
FblI GTMKAC 3 cut(s) 114, 276, 519
Fnu4HI GCNGC 9 cut(s) 208, 283, 643, 701, 704, 734, 784, 1153, 1228
FokI GGATG 8 cut(s) 233, 308, 368, 446, 616, 1124, 1481, 1588
FriOI GRGCYC 3 cut(s) 369, 528, 1312
Fsp4HI GCNGC 9 cut(s) 208, 283, 643, 701, 704, 734, 784, 1153, 1228
FspBI CTAG 2 cut(s) 963, 1674
GlaI GCGC 2 cut(s) 106, 782
GluI GCNGC 9 cut(s) 208, 283, 643, 701, 704, 734, 784, 1153, 1228
GsaI CCCAGC 1 cut(s) 1413
HaeII RGCGCY 1 cut(s) 108
HaeIII GGCC 9 cut(s) 429, 452, 689, 700, 843, 874, 938, 1310, 1430
HapII CCGG 5 cut(s) 96, 315, 588, 611, 1161
HgaI GACGC 4 cut(s) 88, 206, 493, 787
HhaI GCGC 2 cut(s) 107, 783
Hin1I GRCGYC 4 cut(s) 99, 198, 504, 582
Hin1II CATG 5 cut(s) 301, 310, 361, 469, 1435
Hin6I GCGC 2 cut(s) 105, 781
HinP1I GCGC 2 cut(s) 105, 781
HincII GTYRAC 2 cut(s) 139, 277
HindII GTYRAC 2 cut(s) 139, 277
HindIII AAGCTT 1 cut(s) 887
HpaII CCGG 5 cut(s) 96, 315, 588, 611, 1161
HphI GGTGA 9 cut(s) 262, 568, 664, 1118, 1272, 1330, 1447, 1501, 1543
Hpy166II GTNNAC 7 cut(s) 115, 139, 277, 520, 622, 1280, 1364
Hpy8I GTNNAC 7 cut(s) 115, 139, 277, 520, 622, 1280, 1364
Hpy99I CGWCG 9 cut(s) 113, 200, 278, 479, 565, 568, 584, 587, 727
HpyAV CCTTC 4 cut(s) 211, 277, 313, 355
HpyCH4III ACNGT 2 cut(s) 274, 917
HpyCH4IV ACGT 2 cut(s) 560, 582
HpyCH4V TGCA 4 cut(s) 372, 622, 645, 1378
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 152, 642, 709, 718, 739, 895, 955, 1002
HpyF3I CTNAG 6 cut(s) 1143, 1171, 1274, 1358, 1538, 1640
HpySE526I ACGT 2 cut(s) 560, 582
Hsp92I GRCGYC 4 cut(s) 99, 198, 504, 582
Hsp92II CATG 5 cut(s) 301, 310, 361, 469, 1435
HspAI GCGC 2 cut(s) 105, 781
Kpn2I TCCGGA 1 cut(s) 610
KroI GCCGGC 2 cut(s) 314, 587
KroNI GCCGGC 2 cut(s) 316, 589
Kzo9I GATC 5 cut(s) 87, 669, 744, 853, 1120
LguI GCTCTTC 1 cut(s) 815
Lsp1109I GCAGC 4 cut(s) 294, 629, 720, 1164
LweI GCATC 2 cut(s) 721, 1524
MabI ACCWGGT 1 cut(s) 1282
MaeI CTAG 2 cut(s) 963, 1674
MaeII ACGT 2 cut(s) 560, 582
MaeIII GTNAC 1 cut(s) 1489
MalI GATC 5 cut(s) 89, 671, 746, 855, 1122
MbiI CCGCTC 2 cut(s) 180, 186
MboI GATC 5 cut(s) 87, 669, 744, 853, 1120
MboII GAAGA 7 cut(s) 29, 832, 983, 1028, 1034, 1040, 1115
MhlI GDGCHC 4 cut(s) 369, 528, 624, 1312
MlsI TGGCCA 1 cut(s) 938
MluCI AATT 3 cut(s) 1086, 1099, 1609
MluNI TGGCCA 1 cut(s) 938
MmeI TCCRAC 8 cut(s) 213, 342, 498, 567, 1205, 1569, 1599, 1611
Mox20I TGGCCA 1 cut(s) 938
MroI TCCGGA 1 cut(s) 610
MroNI GCCGGC 2 cut(s) 314, 587
MroXI GAANNNNTTC 2 cut(s) 755, 824
MscI TGGCCA 1 cut(s) 938
MslI CAYNNNNRTG 1 cut(s) 464
Msp20I TGGCCA 1 cut(s) 938
MspA1I CMGCKG 2 cut(s) 706, 1227
MspI CCGG 5 cut(s) 96, 315, 588, 611, 1161
MspR9I CCNGG 2 cut(s) 425, 1284
MvaI CCWGG 2 cut(s) 425, 1284
MvnI CGCG 4 cut(s) 210, 441, 781, 783
MwoI GCNNNNNNNGC 9 cut(s) 90, 152, 642, 709, 718, 739, 895, 955, 1002
NaeI GCCGGC 2 cut(s) 316, 589
NcoI CCATGG 1 cut(s) 1431
NdeII GATC 5 cut(s) 87, 669, 744, 853, 1120
NgoMIV GCCGGC 2 cut(s) 314, 587
NlaIII CATG 5 cut(s) 301, 310, 361, 469, 1435
NlaIV GGNNCC 7 cut(s) 94, 319, 366, 481, 609, 1309, 1310
NmeAIII GCCGAG 2 cut(s) 60, 907
NmuCI GTSAC 1 cut(s) 1489
NspI RCATGY 1 cut(s) 361
PaeR7I CTCGAG 1 cut(s) 680
PciSI GCTCTTC 1 cut(s) 815
PcsI WCGNNNNNNNCGW 3 cut(s) 96, 1064, 1265
PdiI GCCGGC 2 cut(s) 316, 589
PdmI GAANNNNTTC 2 cut(s) 755, 824
PfeI GAWTC 6 cut(s) 943, 1055, 1078, 1157, 1354, 1645
PflFI GACNNNGTC 1 cut(s) 1186
PkrI GCNGC 9 cut(s) 209, 284, 644, 702, 705, 735, 785, 1154, 1229
Psp6I CCWGG 2 cut(s) 423, 1282
PspFI CCCAGC 1 cut(s) 1409
PspGI CCWGG 2 cut(s) 423, 1282
PspN4I GGNNCC 7 cut(s) 94, 319, 366, 481, 609, 1309, 1310
PspOMI GGGCCC 1 cut(s) 1308
PspPI GGNCC 7 cut(s) 427, 688, 698, 841, 873, 1308, 1309
PspXI VCTCGAGB 1 cut(s) 680
PstNI CAGNNNCTG 1 cut(s) 288
PsyI GACNNNGTC 1 cut(s) 1186
RsaI GTAC 3 cut(s) 599, 790, 1672
RsaNI GTAC 3 cut(s) 598, 789, 1671
RseI CAYNNNNRTG 1 cut(s) 464
SalI GTCGAC 1 cut(s) 275
SapI GCTCTTC 1 cut(s) 815
SatI GCNGC 9 cut(s) 208, 283, 643, 701, 704, 734, 784, 1153, 1228
Sau3AI GATC 5 cut(s) 87, 669, 744, 853, 1120
Sau96I GGNCC 7 cut(s) 427, 688, 698, 841, 873, 1308, 1309
ScaI AGTACT 1 cut(s) 1672
ScrFI CCNGG 2 cut(s) 425, 1284
SduI GDGCHC 4 cut(s) 369, 528, 624, 1312
SexAI ACCWGGT 1 cut(s) 1282
SfaNI GCATC 2 cut(s) 721, 1524
Sfr274I CTCGAG 1 cut(s) 680
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 1 cut(s) 464
SmlI CTYRAG 2 cut(s) 386, 680
SmoI CTYRAG 2 cut(s) 386, 680
SpeI ACTAGT 1 cut(s) 1673
Sse9I AATT 3 cut(s) 1086, 1099, 1609
SspMI CTAG 2 cut(s) 963, 1674
StyD4I CCNGG 2 cut(s) 423, 1282
StyI CCWWGG 1 cut(s) 1431
TaaI ACNGT 2 cut(s) 274, 917
TaiI ACGT 2 cut(s) 563, 585
TaqI TCGA 9 cut(s) 29, 168, 174, 195, 276, 681, 725, 818, 1352
TaqII GACCGA 2 cut(s) 505, 1199
TasI AATT 3 cut(s) 1086, 1099, 1609
TatI WGTACW 1 cut(s) 1670
TauI GCSGC 5 cut(s) 210, 703, 706, 786, 1230
TfiI GAWTC 6 cut(s) 943, 1055, 1078, 1157, 1354, 1645
TscAI CASTG 2 cut(s) 266, 1179
TseFI GTSAC 1 cut(s) 1489
TseI GCWGC 4 cut(s) 282, 642, 733, 1152
Tsp45I GTSAC 1 cut(s) 1489
TspDTI ATGAA 4 cut(s) 295, 1035, 1041, 1068
TspGWI ACGGA 4 cut(s) 124, 319, 472, 806
TspRI CASTG 2 cut(s) 266, 1179
Tth111I GACNNNGTC 1 cut(s) 1186
VneI GTGCAC 1 cut(s) 620
XapI RAATTY 2 cut(s) 1099, 1609
XceI RCATGY 1 cut(s) 361
XhoI CTCGAG 1 cut(s) 680
XmiI GTMKAC 3 cut(s) 114, 276, 519
XmnI GAANNNNTTC 2 cut(s) 755, 824
XspI CTAG 2 cut(s) 963, 1674
ZraI GACGTC 1 cut(s) 583
ZrmI AGTACT 1 cut(s) 1672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.