RLG00000010824

Myosin heavy chain kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
4600208 .. 4601501
1294 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010824

Sequence Viewer

Length: 1269 bp
ATGGAATTGGAATTCTATCGCAGGAATTCTCTGTTTCGCTTCATAGATATCGACAGAAATAATTTAATAGAATCACCCACTGACCTCCCCAATATCAACACCAATCACGAAGCGTGTGATGATGAAGATCTCCAATTCGGTCCTTCATTGTCTTCAAGCCCCCACACAACCACAATGCTTACACTAATGCCACCCCTAAGCCCAGAGTCCCCATGGACCCTCTCCCCTCACCAAACCCCATCCCCTTCACTCCTTTACCACTGCATCGCCTCCCTCTATCGCCGTGAAGGCTCCATCTCCTCCATTGCAGTCTCAAAGCAGCAAGGAGTAGTCTTCACTGGCTCAGACAGTACCCGAGTTCGTGTGTGGAGACAACCAGACCACATTGAATCCGGTTGTCTCAATGCGACTTCAGGTGAAGTACGAGCTATTGCAACTCATGGTAATATGCTTTTCACCTCACACAGAGACCACAAAATCCGAATGTGGAACTTCTCGGTCAAAGATCACAATTTCAAGTCCAAAAAGGTTTCTTCTCTCCCCAAAACAAGCTCTTTCCCTTTATTTTCAAGATATACAAACACCAAACAGCAACACAAAGAATGCATTTCCTGCTTGGCATATTATCAAACCGATGGTCTGTTGTATACTGGCTCCCATGACAGAACAGTCAAAGCATGGCGGCTTATAACCAATCACTGTGTGGACTCATTTGTGGCACATGAAGACAATGTGAATGCAATGGTGGTGAACCAAGATGATGGGTGCGTTTTCACTTGCTCCTCAGATGGTTCTGTCAAACTCTGGAGAAGGGTTTTCAGAGAAAACTCTCACACTCTCACCATGACTCTCAAATCCCAATTCCCAAATTCCAACTACCCTGTAAACGCCATGGCCTTAAACACATCATCCAACTCTTGCTTCCTCTATTCTGGTTCTTCAGACGGAACCATTAGTTTCTGGGAGAAGGAGAAACTGACCCCACAGGGCCACCATTTTTCAGTTCTGTGTTTAGTGGCCATCGAGAAGTTGATTTTCAGTGGATCAGAGGATACTACAATTAGGGTTTGGAGGAGGGAAGAAGGGGGTTGTTTTCATGAATGTTTGGCTGTGTTGGAGGGGCATAGAGGCCCTGTGAGGTGTTTGGCTGCTTGTTTGGAGATTGAGAAAGTTGTGAAGGGTTTTTTGGTTTACAGTGCCAGTTTGGATCAAACTTTTAAGGTGTGGAGTGTTAAGGTCTCGCCGGAAGAGGGAATGGGCCGGGGTTGA

Protein Analysis

423

Amino Acids

47.55

Weight (kDa)

7.0

Isoelectric Point (pI)

53.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 92 - 187 4.1e-06 WDHD1 first WD40 domain
EIF3I PF24805 95 - 270 1.1e-07 EIF3I
Beta-prop_TEP1_2nd PF25047 108 - 271 2.2e-10 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 194 - 285 6.9e-16 WDR5 beta-propeller domain
Beta-prop_ACSF4 PF13570 194 - 357 4.6e-06 Beta-alanine-activating enzyme, beta-propeller
WDR55 PF24796 194 - 412 9.4e-16 WDR55
WD40_CDC20-Fz PF24807 197 - 328 1.4e-09 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 197 - 270 3.8e-14 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 197 - 409 5.7e-08 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 199 - 287 2.7e-09 THOC3 beta-propeller domain
WD40_Prp19 PF24814 199 - 324 6.9e-13 Prp19 WD40 domain
Beta-prop_WDR3_2nd PF25172 199 - 324 3.2e-11 WDR3 second beta-propeller domain
WD40_WDHD1_1st PF24817 201 - 286 4.6e-06 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 205 - 324 8.4e-07 Echinoderm microtubule-associated protein second beta-propeller
WD40 PF00400 233 - 269 1.4e-06 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 240 - 412 3.1e-11 WDHD1 first WD40 domain
WD40_Prp19 PF24814 295 - 411 1.6e-07 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 296 - 412 5.5e-12 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 300 - 412 8.5e-13 WDR5 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 307 - 410 1.2e-08 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 343 - 412 7.3e-06 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 689
AasI GACNNNNNNGTC 1 cut(s) 668
AccI GTMKAC 1 cut(s) 647
AciI CCGC 1 cut(s) 682
AclWI GGATC 2 cut(s) 1051, 1215
AcoI YGGCCR 1 cut(s) 1017
AcsI RAATTY 3 cut(s) 11, 25, 868
AcuI CTGAAG 2 cut(s) 396, 924
AdeI CACNNNGTG 1 cut(s) 703
AfaI GTAC 2 cut(s) 352, 423
AfiI CCNNNNNNNGG 1 cut(s) 1250
AgsI TTSAA 4 cut(s) 156, 389, 517, 570
AjuI GAANNNNNNNTTGG 4 cut(s) 905, 937, 1169, 1201
AluBI AGCT 2 cut(s) 428, 552
AluI AGCT 2 cut(s) 428, 552
Alw26I GTCTC 5 cut(s) 316, 364, 404, 462, 1243
AlwI GGATC 2 cut(s) 1051, 1215
Ama87I CYCGRG 1 cut(s) 354
AoxI GGCC 5 cut(s) 894, 988, 1017, 1129, 1258
ApeKI GCWGC 2 cut(s) 319, 1148
ApoI RAATTY 3 cut(s) 11, 25, 868
ArsI GACNNNNNNTTYG 2 cut(s) 622, 654
AspS9I GGNCC 5 cut(s) 140, 216, 988, 1130, 1258
AsuC2I CCSGG 1 cut(s) 1262
AsuHPI GGTGA 6 cut(s) 66, 221, 428, 448, 760, 832
AvaI CYCGRG 1 cut(s) 354
AvaII GGWCC 2 cut(s) 140, 216
BalI TGGCCA 1 cut(s) 1019
BbsI GAAGAC 3 cut(s) 144, 325, 732
BbvI GCAGC 2 cut(s) 331, 1135
BccI CCATC 6 cut(s) 247, 302, 629, 755, 782, 1028
BceAI ACGGC 1 cut(s) 267
BciVI GTATCC 1 cut(s) 1045
BcnI CCSGG 1 cut(s) 1262
BcoDI GTCTC 5 cut(s) 316, 364, 404, 462, 1243
BfuI GTATCC 1 cut(s) 1045
BglI GCCNNNNNGGC 1 cut(s) 288
BglII AGATCT 1 cut(s) 127
BisI GCNGC 3 cut(s) 320, 683, 1149
BlsI GCNGC 3 cut(s) 321, 684, 1150
Bme1390I CCNGG 1 cut(s) 1262
Bme18I GGWCC 2 cut(s) 140, 216
BmeT110I CYCGRG 1 cut(s) 354
BmgT120I GGNCC 5 cut(s) 140, 216, 988, 1130, 1258
BmiI GGNNCC 4 cut(s) 218, 292, 655, 949
BmrFI CCNGG 1 cut(s) 1262
BmsI GCATC 1 cut(s) 273
BpiI GAAGAC 3 cut(s) 144, 325, 732
BpmI CTGGAG 1 cut(s) 826
Bpu10I CCTNAGC 1 cut(s) 197
BpuMI CCSGG 1 cut(s) 1262
BsaBI GATNNNNATC 1 cut(s) 126
BsaI GGTCTC 2 cut(s) 462, 1243
BsaJI CCNNGG 3 cut(s) 212, 891, 1261
BsaWI WCCGGW 1 cut(s) 392
Bsc4I CCNNNNNNNGG 1 cut(s) 1250
Bse1I ACTGG 3 cut(s) 343, 655, 1200
Bse3DI GCAATG 2 cut(s) 303, 747
Bse8I GATNNNNATC 1 cut(s) 126
BseDI CCNNGG 3 cut(s) 212, 891, 1261
BseGI GGATG 2 cut(s) 239, 908
BseJI GATNNNNATC 1 cut(s) 126
BseLI CCNNNNNNNGG 1 cut(s) 1250
BseMI GCAATG 2 cut(s) 303, 747
BseMII CTCAG 2 cut(s) 357, 798
BseNI ACTGG 3 cut(s) 343, 655, 1200
BseRI GAGGAG 3 cut(s) 289, 772, 1087
BseXI GCAGC 2 cut(s) 331, 1135
BshFI GGCC 5 cut(s) 896, 990, 1019, 1131, 1260
BsiHKCI CYCGRG 1 cut(s) 354
BsiSI CCGG 3 cut(s) 393, 1244, 1261
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 1 cut(s) 1250
BsmAI GTCTC 5 cut(s) 316, 364, 404, 462, 1243
BsmFI GGGAC 1 cut(s) 193
BsmI GAATGC 2 cut(s) 608, 742
BsnI GGCC 5 cut(s) 896, 990, 1019, 1131, 1260
Bso31I GGTCTC 2 cut(s) 462, 1243
BsoBI CYCGRG 1 cut(s) 354
Bsp143I GATC 4 cut(s) 127, 505, 1043, 1207
Bsp19I CCATGG 2 cut(s) 212, 891
BspACI CCGC 1 cut(s) 682
BspANI GGCC 5 cut(s) 896, 990, 1019, 1131, 1260
BspCNI CTCAG 2 cut(s) 356, 797
BspHI TCATGA 1 cut(s) 1096
BspLI GGNNCC 4 cut(s) 218, 292, 655, 949
BspPI GGATC 2 cut(s) 1051, 1215
BspTNI GGTCTC 2 cut(s) 462, 1243
BsrDI GCAATG 2 cut(s) 303, 747
BsrI ACTGG 3 cut(s) 343, 655, 1200
BssECI CCNNGG 3 cut(s) 212, 891, 1261
BssMI GATC 4 cut(s) 127, 505, 1043, 1207
BssNAI GTATAC 1 cut(s) 648
BssT1I CCWWGG 2 cut(s) 212, 891
Bst1107I GTATAC 1 cut(s) 648
Bst4CI ACNGT 4 cut(s) 350, 670, 701, 1196
Bst6I CTCTTC 1 cut(s) 1242
BstAPI GCANNNNNTGC 1 cut(s) 612
BstDEI CTNAG 3 cut(s) 197, 343, 784
BstDSI CCRYGG 2 cut(s) 212, 891
BstF5I GGATG 2 cut(s) 239, 908
BstKTI GATC 4 cut(s) 130, 508, 1046, 1210
BstMAI GTCTC 5 cut(s) 316, 364, 404, 462, 1243
BstMBI GATC 4 cut(s) 127, 505, 1043, 1207
BstMWI GCNNNNNNNGC 2 cut(s) 288, 612
BstSCI CCNGG 1 cut(s) 1260
BstV1I GCAGC 2 cut(s) 331, 1135
BstV2I GAAGAC 3 cut(s) 144, 325, 732
BstX2I RGATCY 1 cut(s) 127
BstXI CCANNNNNNTGG 1 cut(s) 761
BstYI RGATCY 1 cut(s) 127
BstZ17I GTATAC 1 cut(s) 648
BsuI GTATCC 1 cut(s) 1045
BsuRI GGCC 5 cut(s) 896, 990, 1019, 1131, 1260
BtgI CCRYGG 2 cut(s) 212, 891
BtgZI GCGATG 1 cut(s) 250
BtsCI GGATG 2 cut(s) 239, 908
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 6 cut(s) 78, 259, 336, 697, 1045, 1201
CciI TCATGA 1 cut(s) 1096
Cfr13I GGNCC 5 cut(s) 140, 216, 988, 1130, 1258
Csp6I GTAC 2 cut(s) 351, 422
CviAII CATG 8 cut(s) 213, 440, 659, 678, 722, 844, 892, 1097
CviQI GTAC 2 cut(s) 351, 422
DdeI CTNAG 3 cut(s) 197, 343, 784
DpnI GATC 4 cut(s) 129, 507, 1045, 1209
DpnII GATC 4 cut(s) 127, 505, 1043, 1207
DraIII CACNNNGTG 1 cut(s) 703
DrdI GACNNNNNNGTC 1 cut(s) 668
DseDI GACNNNNNNGTC 1 cut(s) 668
EaeI YGGCCR 1 cut(s) 1017
Eam1104I CTCTTC 1 cut(s) 1242
EarI CTCTTC 1 cut(s) 1242
Eco130I CCWWGG 2 cut(s) 212, 891
Eco31I GGTCTC 2 cut(s) 462, 1243
Eco32I GATATC 1 cut(s) 49
Eco47I GGWCC 2 cut(s) 140, 216
Eco57I CTGAAG 2 cut(s) 396, 924
Eco88I CYCGRG 1 cut(s) 354
EcoO109I RGGNCCY 1 cut(s) 1130
EcoRI GAATTC 2 cut(s) 11, 25
EcoRV GATATC 1 cut(s) 49
EcoT14I CCWWGG 2 cut(s) 212, 891
EcoT22I ATGCAT 1 cut(s) 608
ErhI CCWWGG 2 cut(s) 212, 891
FaeI CATG 8 cut(s) 216, 443, 662, 681, 725, 847, 895, 1100
FaqI GGGAC 1 cut(s) 193
FatI CATG 8 cut(s) 212, 439, 658, 677, 721, 843, 891, 1096
FblI GTMKAC 1 cut(s) 647
Fnu4HI GCNGC 3 cut(s) 320, 683, 1149
FokI GGATG 2 cut(s) 226, 895
Fsp4HI GCNGC 3 cut(s) 320, 683, 1149
GluI GCNGC 3 cut(s) 320, 683, 1149
GsuI CTGGAG 1 cut(s) 826
HaeIII GGCC 5 cut(s) 896, 990, 1019, 1131, 1260
HapII CCGG 3 cut(s) 393, 1244, 1261
Hin1II CATG 8 cut(s) 216, 443, 662, 681, 725, 847, 895, 1100
HinfI GANTC 5 cut(s) 71, 206, 389, 707, 847
HpaII CCGG 3 cut(s) 393, 1244, 1261
HphI GGTGA 6 cut(s) 66, 221, 428, 448, 760, 832
Hpy166II GTNNAC 5 cut(s) 648, 706, 751, 886, 1192
Hpy188I TCNGA 6 cut(s) 346, 482, 787, 821, 943, 1048
Hpy188III TCNNGA 5 cut(s) 107, 570, 805, 1024, 1097
Hpy8I GTNNAC 5 cut(s) 648, 706, 751, 886, 1192
HpyAV CCTTC 7 cut(s) 153, 255, 281, 804, 961, 1076, 1171
HpyCH4III ACNGT 4 cut(s) 350, 670, 701, 1196
HpyCH4V TGCA 5 cut(s) 264, 308, 434, 606, 740
HpyF10VI GCNNNNNNNGC 2 cut(s) 288, 612
HpyF3I CTNAG 3 cut(s) 197, 343, 784
Hsp92II CATG 8 cut(s) 216, 443, 662, 681, 725, 847, 895, 1100
Kzo9I GATC 4 cut(s) 127, 505, 1043, 1207
LmnI GCTCC 3 cut(s) 296, 659, 785
Lsp1109I GCAGC 2 cut(s) 331, 1135
LweI GCATC 1 cut(s) 273
MalI GATC 4 cut(s) 129, 507, 1045, 1209
MboI GATC 4 cut(s) 127, 505, 1043, 1207
MboII GAAGA 8 cut(s) 137, 144, 325, 525, 737, 930, 1091, 1259
MflI RGATCY 1 cut(s) 127
MlsI TGGCCA 1 cut(s) 1019
MluCI AATT 9 cut(s) 5, 11, 25, 61, 134, 511, 860, 868, 1059
MluNI TGGCCA 1 cut(s) 1019
MlyI GAGTC 3 cut(s) 215, 701, 841
MmeI TCCRAC 3 cut(s) 897, 936, 1095
Mox20I TGGCCA 1 cut(s) 1019
Mph1103I ATGCAT 1 cut(s) 608
MscI TGGCCA 1 cut(s) 1019
MseI TTAA 4 cut(s) 65, 899, 1218, 1233
Msp20I TGGCCA 1 cut(s) 1019
MspI CCGG 3 cut(s) 393, 1244, 1261
MspR9I CCNGG 1 cut(s) 1262
Mva1269I GAATGC 2 cut(s) 608, 742
MwoI GCNNNNNNNGC 2 cut(s) 288, 612
NciI CCSGG 1 cut(s) 1262
NcoI CCATGG 2 cut(s) 212, 891
NdeII GATC 4 cut(s) 127, 505, 1043, 1207
NlaIII CATG 8 cut(s) 216, 443, 662, 681, 725, 847, 895, 1100
NlaIV GGNNCC 4 cut(s) 218, 292, 655, 949
NsiI ATGCAT 1 cut(s) 608
PagI TCATGA 1 cut(s) 1096
PctI GAATGC 2 cut(s) 608, 742
PfeI GAWTC 2 cut(s) 71, 389
PkrI GCNGC 3 cut(s) 321, 684, 1150
PleI GAGTC 3 cut(s) 214, 701, 841
PpsI GAGTC 3 cut(s) 214, 701, 841
PsiI TTATAA 1 cut(s) 689
PspN4I GGNNCC 4 cut(s) 218, 292, 655, 949
PspPI GGNCC 5 cut(s) 140, 216, 988, 1130, 1258
PsuI RGATCY 1 cut(s) 127
RsaI GTAC 2 cut(s) 352, 423
RsaNI GTAC 2 cut(s) 351, 422
SaqAI TTAA 4 cut(s) 65, 899, 1218, 1233
SatI GCNGC 3 cut(s) 320, 683, 1149
Sau3AI GATC 4 cut(s) 127, 505, 1043, 1207
Sau96I GGNCC 5 cut(s) 140, 216, 988, 1130, 1258
SchI GAGTC 3 cut(s) 215, 701, 841
ScrFI CCNGG 1 cut(s) 1262
SetI ASST 9 cut(s) 87, 418, 430, 461, 531, 554, 1142, 1224, 1239
SfaNI GCATC 1 cut(s) 273
SinI GGWCC 2 cut(s) 140, 216
Sse9I AATT 9 cut(s) 5, 11, 25, 61, 134, 511, 860, 868, 1059
SsiI CCGC 1 cut(s) 682
StyD4I CCNGG 1 cut(s) 1260
StyI CCWWGG 2 cut(s) 212, 891
TaaI ACNGT 4 cut(s) 350, 670, 701, 1196
TaqI TCGA 2 cut(s) 51, 1023
TaqII GACCGA 2 cut(s) 128, 487
TasI AATT 9 cut(s) 5, 11, 25, 61, 134, 511, 860, 868, 1059
TauI GCSGC 1 cut(s) 685
TfiI GAWTC 2 cut(s) 71, 389
Tru1I TTAA 4 cut(s) 65, 899, 1218, 1233
Tru9I TTAA 4 cut(s) 65, 899, 1218, 1233
TscAI CASTG 6 cut(s) 85, 266, 343, 704, 1045, 1201
TseI GCWGC 2 cut(s) 319, 1148
TspDTI ATGAA 6 cut(s) 31, 135, 138, 738, 1085, 1113
TspGWI ACGGA 1 cut(s) 960
TspRI CASTG 6 cut(s) 85, 266, 343, 704, 1045, 1201
VpaK11BI GGWCC 2 cut(s) 140, 216
XapI RAATTY 3 cut(s) 11, 25, 868
XcmI CCANNNNNNNNNTGG 2 cut(s) 210, 700
XmiI GTMKAC 1 cut(s) 647
Zsp2I ATGCAT 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.