Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004527

Physical Location & Seq

Genomic Coordinates Reverse (-)

62951302 .. 62953059

Gene Structure 1758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG459900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGAATTGGAATTCTATGGCAGGAATTCTCTGTTACGCTTCATAGATATCGACAGAAAGAATGTAATAGAATCACCCACTGACCTCCCCAATATCAACACCAATCACGAAGTGTGTGATGATGAAGATCTCCAATTCAGTCCTTCATTGTCTTCAAGCCCCCACACAACCACAAATTCCACAATGCTTACACTAATGCCACCCCCAAGCCCAGAGTCACCGTGGACCTTCTCCCCTCACCAAACCCCGTCCCCTTCACTCCTTTACCACTGCATTGCCTCCCTCTATCGCCGCGAAGGCTCCATCTCCTCCATTGCAGTCTCAAAGCAGCAAGGAGTAGTCTTCACTGGCTCAGAGAGTACCCGAGTTCGTGTGTGGAGACAACCAGACCACATTGAATACGGTTGTCTCAATGCGACTTCAGGTGAAGTACGAGCTATTGCAACTCATGGTAATATGCTTTTCACCTCACACAAAGACCACAAAATCCGAATGTGGAACTTCTCGGTCACAGATCACAATTTCAAGTCCAAAAAGGTTTCTTCTCTCCCCAAAACAAGCTCTTTCCCTTTATTTTCAAGATTTACAGACACCAAACAGAAACACAAAGAATGCATTTCCTGCTTGGCATATTATCAAACCGATGGTCTGTTGTATACTGGCTCCCATGACAGAACAGTCAAAGCATGGCGGCTTATAACCAATCACTGTGTGGACTCATTTGTGGCACATGAAGACAATGTGAATGCAATGGTGGTGAACCAAGATGATGGGTGCGTTTTCACTTGCTCCTCAGATGGTTCTGTCAAACTCTGGAGAAGGGTTTTCAGAGAAAACTCTCACACTCTCACCATGACTCTCAAATCTCAATTCCCAAATTCCAACTACCCTGTAAACGCCATAGCCTTAAACACATCATCCAACTCTTGCTTCCTCTACTCTGGTTCTTCAGACGGAACCATTAGTTTCTGGGAGAAGGAGAAACTGACCCACAGGTTTAACCATGGTGGGTTTTTACAGGGCCACCATTTTTCAGTTCTGTGTTTAGTGGCCATCGAGAAGTTGATTTTCAGTGGATCAGAGGATACTACAATTAGGGTTTGGAGGAGGGAAGAAGGGGGTTGTTTTCATGAATGTTTAGCTGTATTGGAGGGGCATAGAGGCCCTGTGAGGTGTTTGGCTGCTTGTTTGGAGATTGAGAAAGTTGTGAAGGGTTTTTTGGTTTATAGTGCCAGTTTGGATCAAACTTTTAAGGTGTGGAGTGTTAAGGTCTCACCGGAAGAGGGAATGGGGTTGAACTGTTATATGGATCGAAGATTTTCGAGGAACAATGGGATGCAATGTGAGACCAGGACTGTGTTGTCTCCTTCATGGGTTGAGAGGAAGCTGCTCCAGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000775 GO:0000776 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0005874 GO:0005875 GO:0005938 GO:0007154 GO:0007165 GO:0008017 GO:0008092 GO:0008104 GO:0008150 GO:0009987 GO:0015630 GO:0015631 GO:0017016 GO:0017048 GO:0019899 GO:0019932 GO:0019933 GO:0019935 GO:0023052 GO:0031267 GO:0031592 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0035556 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044380 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0044877 GO:0045504 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051179 GO:0051640 GO:0051641 GO:0051642 GO:0051645 GO:0051716 GO:0061842 GO:0065007 GO:0070727 GO:0070840 GO:0071539 GO:0071944 GO:0072698 GO:0098687 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1905508

KEGG Pathways

Metabolic & Signaling

ko04114 ko04120 ko04218 ko04310 ko04340 ko04341 ko04390 ko04624 ko04710 ko05131 map04114 map04120 map04218 map04310 map04340 map04341 map04390 map04624 map04710 map05131

Pfam Domains

Protein Families

WD40

Protein Analysis

466

Amino Acids

52.83

Weight (kDa)

7.88

Isoelectric Point (pI)

53.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_WDHD1_1st	PF24817	95 - 191	5.5e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	98 - 286	1.4e-20	WDR5 beta-propeller domain
EIF3I	PF24805	98 - 306	9.5e-08	EIF3I
Beta-prop_TEP1_2nd	PF25047	111 - 274	2.1e-10	TEP-1 second beta-propeller
WDR55	PF24796	197 - 423	1e-16	WDR55
Beta-prop_EML	PF23409	199 - 302	1e-05	Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta	PF25391	201 - 420	2.9e-07	G protein beta WD-40 repeat protein
Beta-prop_WDR3_1st	PF25173	201 - 273	6.6e-14	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	201 - 330	4e-09	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	202 - 327	7.7e-13	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	202 - 291	2.9e-09	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	202 - 327	5.7e-11	WDR3 second beta-propeller domain
Beta-prop_ACSF4	PF13570	203 - 368	1.9e-06	Beta-alanine-activating enzyme, beta-propeller
WD40_WDHD1_1st	PF24817	203 - 288	7.3e-06	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	208 - 369	2.6e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40	PF00400	236 - 272	1.6e-06	WD domain, G-beta repeat
WD40_WDHD1_1st	PF24817	243 - 423	7.1e-11	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	288 - 423	1e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	293 - 423	1.2e-12	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	298 - 420	1.1e-07	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	310 - 424	4.7e-10	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	355 - 424	8.4e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004527)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35690 FvH4_6g31961
malus_domestica	MD08G1115200.v1.1 MD09G1207500.v1.1 MD17G1188800.v1.1
prunus_persica	Prupe.1G449400_v2.0.a1 Prupe.3G063300_v2.0.a1
pyrus_communis	pycom09g12370
rosa_chinensis	RchiOBHm_Chr2g0139471 RchiOBHm_Chr6g0306111
rosa_laevigata	RLG00000010824 RLG00000019813
rosa_multiflora	Rmu_sc0000785.1_g000023 Rmu_sc0000903.1_g000022 Rmu_sc0001983.1_g000002
rosa_roxburghii	Rroxscaffold_2G00105410 Rroxscaffold_7G00162050
rosa_rugosa	Rorug06G0282100 Rorug06G0346800
rosa_samantha	Rh2AG407500 Rh2BG418100 Rh2CG393500 Rh2DG426900 Rh6AG459200 Rh6BG441700 Rh6CG473700 Rh6DG459900
rosa_wichuraiana	Rw2G033010 Rw2G033270 Rw6G006540 Rw6G040030 Rw7G016590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	698
AasI	GACNNNNNNGTC	2 cut(s)	677, 1360
AccI	GTMKAC	1 cut(s)	656
AccII	CGCG	1 cut(s)	294
AciI	CCGC	2 cut(s)	292, 691
AclWI	GGATC	3 cut(s)	1084, 1248, 1317
AcoI	YGGCCR	1 cut(s)	1050
AcsI	RAATTY	4 cut(s)	11, 25, 175, 877
AcuI	CTGAAG	2 cut(s)	405, 933
AdeI	CACNNNGTG	2 cut(s)	112, 712
AfaI	GTAC	2 cut(s)	361, 432
AfiI	CCNNNNNNNGG	1 cut(s)	1283
AgsI	TTSAA	5 cut(s)	156, 398, 526, 579, 1297
AjnI	CCWGG	1 cut(s)	1349
AjuI	GAANNNNNNNTTGG	4 cut(s)	914, 946, 1202, 1234
AluBI	AGCT	4 cut(s)	437, 561, 1142, 1387
AluI	AGCT	4 cut(s)	437, 561, 1142, 1387
Alw26I	GTCTC	6 cut(s)	325, 373, 413, 1276, 1340, 1368
AlwI	GGATC	3 cut(s)	1084, 1248, 1317
Ama87I	CYCGRG	1 cut(s)	363
AoxI	GGCC	3 cut(s)	1021, 1050, 1162
ApeKI	GCWGC	3 cut(s)	328, 1181, 1387
ApoI	RAATTY	4 cut(s)	11, 25, 175, 877
ArsI	GACNNNNNNTTYG	2 cut(s)	631, 663
Asp700I	GAANNNNTTC	1 cut(s)	1318
AspS9I	GGNCC	3 cut(s)	225, 1021, 1163
AsuHPI	GGTGA	8 cut(s)	66, 210, 230, 437, 457, 769, 841, 1266
AvaI	CYCGRG	1 cut(s)	363
AvaII	GGWCC	1 cut(s)	225
BalI	TGGCCA	1 cut(s)	1052
BbsI	GAAGAC	3 cut(s)	144, 334, 741
BbvI	GCAGC	3 cut(s)	340, 1168, 1374
BccI	CCATC	5 cut(s)	311, 638, 764, 791, 1061
BciT130I	CCWGG	1 cut(s)	1351
BciVI	GTATCC	1 cut(s)	1078
BcoDI	GTCTC	6 cut(s)	325, 373, 413, 1276, 1340, 1368
BfuI	GTATCC	1 cut(s)	1078
BglI	GCCNNNNNGGC	1 cut(s)	297
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	5 cut(s)	292, 329, 692, 1182, 1388
BlsI	GCNGC	5 cut(s)	293, 330, 693, 1183, 1389
Bme1390I	CCNGG	1 cut(s)	1351
Bme18I	GGWCC	1 cut(s)	225
BmeT110I	CYCGRG	1 cut(s)	363
BmgT120I	GGNCC	3 cut(s)	225, 1021, 1163
BmiI	GGNNCC	3 cut(s)	301, 664, 958
BmrFI	CCNGG	1 cut(s)	1351
BmsI	GCATC	1 cut(s)	1326
BpiI	GAAGAC	3 cut(s)	144, 334, 741
BpmI	CTGGAG	2 cut(s)	835, 1376
BsaBI	GATNNNNATC	1 cut(s)	126
BsaI	GGTCTC	2 cut(s)	1276, 1340
BsaJI	CCNNGG	2 cut(s)	221, 1003
BsaWI	WCCGGW	1 cut(s)	1276
Bsc4I	CCNNNNNNNGG	1 cut(s)	1283
Bse1I	ACTGG	3 cut(s)	352, 664, 1233
Bse3DI	GCAATG	4 cut(s)	273, 312, 756, 1346
Bse8I	GATNNNNATC	1 cut(s)	126
BseBI	CCWGG	1 cut(s)	1351
BseDI	CCNNGG	2 cut(s)	221, 1003
BseGI	GGATG	2 cut(s)	917, 1341
BseJI	GATNNNNATC	1 cut(s)	126
BseLI	CCNNNNNNNGG	1 cut(s)	1283
BseMI	GCAATG	4 cut(s)	273, 312, 756, 1346
BseMII	CTCAG	2 cut(s)	366, 807
BseNI	ACTGG	3 cut(s)	352, 664, 1233
BseRI	GAGGAG	3 cut(s)	298, 781, 1120
BseXI	GCAGC	3 cut(s)	340, 1168, 1374
Bsh1236I	CGCG	1 cut(s)	294
BshFI	GGCC	3 cut(s)	1023, 1052, 1164
BsiHKCI	CYCGRG	1 cut(s)	363
BsiSI	CCGG	1 cut(s)	1277
BslFI	GGGAC	1 cut(s)	235
BslI	CCNNNNNNNGG	1 cut(s)	1283
BsmAI	GTCTC	6 cut(s)	325, 373, 413, 1276, 1340, 1368
BsmFI	GGGAC	1 cut(s)	235
BsmI	GAATGC	2 cut(s)	617, 751
BsnI	GGCC	3 cut(s)	1023, 1052, 1164
Bso31I	GGTCTC	2 cut(s)	1276, 1340
BsoBI	CYCGRG	1 cut(s)	363
Bsp143I	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
Bsp19I	CCATGG	1 cut(s)	1003
BspACI	CCGC	2 cut(s)	292, 691
BspANI	GGCC	3 cut(s)	1023, 1052, 1164
BspCNI	CTCAG	2 cut(s)	365, 806
BspFNI	CGCG	1 cut(s)	294
BspHI	TCATGA	1 cut(s)	1129
BspLI	GGNNCC	3 cut(s)	301, 664, 958
BspPI	GGATC	3 cut(s)	1084, 1248, 1317
BspTNI	GGTCTC	2 cut(s)	1276, 1340
BsrDI	GCAATG	4 cut(s)	273, 312, 756, 1346
BsrI	ACTGG	3 cut(s)	352, 664, 1233
BssECI	CCNNGG	2 cut(s)	221, 1003
BssMI	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
BssNAI	GTATAC	1 cut(s)	657
BssT1I	CCWWGG	1 cut(s)	1003
Bst1107I	GTATAC	1 cut(s)	657
Bst2UI	CCWGG	1 cut(s)	1351
Bst4CI	ACNGT	6 cut(s)	222, 404, 679, 710, 1301, 1357
Bst6I	CTCTTC	1 cut(s)	1275
BstAPI	GCANNNNNTGC	1 cut(s)	621
BstDEI	CTNAG	2 cut(s)	352, 793
BstDSI	CCRYGG	2 cut(s)	221, 1003
BstF5I	GGATG	2 cut(s)	917, 1341
BstFNI	CGCG	1 cut(s)	294
BstKTI	GATC	5 cut(s)	130, 517, 1079, 1243, 1312
BstMAI	GTCTC	6 cut(s)	325, 373, 413, 1276, 1340, 1368
BstMBI	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
BstMWI	GCNNNNNNNGC	2 cut(s)	297, 621
BstNI	CCWGG	1 cut(s)	1351
BstSCI	CCNGG	1 cut(s)	1349
BstUI	CGCG	1 cut(s)	294
BstV1I	GCAGC	3 cut(s)	340, 1168, 1374
BstV2I	GAAGAC	3 cut(s)	144, 334, 741
BstX2I	RGATCY	1 cut(s)	127
BstXI	CCANNNNNNTGG	1 cut(s)	770
BstYI	RGATCY	1 cut(s)	127
BstZ17I	GTATAC	1 cut(s)	657
BsuI	GTATCC	1 cut(s)	1078
BsuRI	GGCC	3 cut(s)	1023, 1052, 1164
BtgI	CCRYGG	2 cut(s)	221, 1003
BtsCI	GGATG	2 cut(s)	917, 1341
BtsI	GCAGTG	1 cut(s)	268
BtsIMutI	CAGTG	5 cut(s)	78, 268, 345, 706, 1078
CciI	TCATGA	1 cut(s)	1129
Cfr13I	GGNCC	3 cut(s)	225, 1021, 1163
Csp6I	GTAC	2 cut(s)	360, 431
CviAII	CATG	8 cut(s)	449, 668, 687, 731, 853, 1004, 1130, 1371
CviQI	GTAC	2 cut(s)	360, 431
DdeI	CTNAG	2 cut(s)	352, 793
DpnI	GATC	5 cut(s)	129, 516, 1078, 1242, 1311
DpnII	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
DraIII	CACNNNGTG	2 cut(s)	112, 712
DrdI	GACNNNNNNGTC	2 cut(s)	677, 1360
DseDI	GACNNNNNNGTC	2 cut(s)	677, 1360
EaeI	YGGCCR	1 cut(s)	1050
Eam1104I	CTCTTC	1 cut(s)	1275
EarI	CTCTTC	1 cut(s)	1275
Eco130I	CCWWGG	1 cut(s)	1003
Eco31I	GGTCTC	2 cut(s)	1276, 1340
Eco32I	GATATC	1 cut(s)	49
Eco47I	GGWCC	1 cut(s)	225
Eco57I	CTGAAG	2 cut(s)	405, 933
Eco88I	CYCGRG	1 cut(s)	363
EcoO109I	RGGNCCY	1 cut(s)	1163
EcoRI	GAATTC	2 cut(s)	11, 25
EcoRII	CCWGG	1 cut(s)	1349
EcoRV	GATATC	1 cut(s)	49
EcoT14I	CCWWGG	1 cut(s)	1003
EcoT22I	ATGCAT	1 cut(s)	617
ErhI	CCWWGG	1 cut(s)	1003
FaeI	CATG	8 cut(s)	452, 671, 690, 734, 856, 1007, 1133, 1374
FaqI	GGGAC	1 cut(s)	235
FatI	CATG	8 cut(s)	448, 667, 686, 730, 852, 1003, 1129, 1370
FblI	GTMKAC	1 cut(s)	656
Fnu4HI	GCNGC	5 cut(s)	292, 329, 692, 1182, 1388
FokI	GGATG	2 cut(s)	904, 1348
Fsp4HI	GCNGC	5 cut(s)	292, 329, 692, 1182, 1388
GluI	GCNGC	5 cut(s)	292, 329, 692, 1182, 1388
GsuI	CTGGAG	2 cut(s)	835, 1376
HaeIII	GGCC	3 cut(s)	1023, 1052, 1164
HapII	CCGG	1 cut(s)	1277
Hin1II	CATG	8 cut(s)	452, 671, 690, 734, 856, 1007, 1133, 1374
HinfI	GANTC	4 cut(s)	71, 215, 716, 856
HpaII	CCGG	1 cut(s)	1277
HphI	GGTGA	8 cut(s)	66, 210, 230, 437, 457, 769, 841, 1266
Hpy166II	GTNNAC	5 cut(s)	225, 657, 715, 760, 895
Hpy188I	TCNGA	6 cut(s)	355, 491, 796, 830, 952, 1081
Hpy188III	TCNNGA	6 cut(s)	107, 579, 814, 1057, 1130, 1393
Hpy8I	GTNNAC	5 cut(s)	225, 657, 715, 760, 895
HpyAV	CCTTC	9 cut(s)	153, 238, 264, 290, 813, 970, 1109, 1204, 1377
HpyCH4III	ACNGT	6 cut(s)	222, 404, 679, 710, 1301, 1357
HpyCH4V	TGCA	6 cut(s)	273, 317, 443, 615, 749, 1339
HpyF10VI	GCNNNNNNNGC	2 cut(s)	297, 621
HpyF3I	CTNAG	2 cut(s)	352, 793
Hsp92II	CATG	8 cut(s)	452, 671, 690, 734, 856, 1007, 1133, 1374
Kzo9I	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
LmnI	GCTCC	4 cut(s)	305, 668, 794, 1395
Lsp1109I	GCAGC	3 cut(s)	340, 1168, 1374
LweI	GCATC	1 cut(s)	1326
MaeIII	GTNAC	3 cut(s)	33, 216, 508
MalI	GATC	5 cut(s)	129, 516, 1078, 1242, 1311
MboI	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
MboII	GAAGA	9 cut(s)	137, 144, 334, 534, 746, 939, 1124, 1292, 1326
MflI	RGATCY	1 cut(s)	127
MlsI	TGGCCA	1 cut(s)	1052
MluCI	AATT	9 cut(s)	5, 11, 25, 134, 175, 520, 869, 877, 1092
MluNI	TGGCCA	1 cut(s)	1052
MlyI	GAGTC	3 cut(s)	224, 710, 850
MmeI	TCCRAC	2 cut(s)	906, 945
Mox20I	TGGCCA	1 cut(s)	1052
Mph1103I	ATGCAT	1 cut(s)	617
MroXI	GAANNNNTTC	1 cut(s)	1318
MscI	TGGCCA	1 cut(s)	1052
MseI	TTAA	4 cut(s)	908, 999, 1251, 1266
Msp20I	TGGCCA	1 cut(s)	1052
MspI	CCGG	1 cut(s)	1277
MspR9I	CCNGG	1 cut(s)	1351
Mva1269I	GAATGC	2 cut(s)	617, 751
MvaI	CCWGG	1 cut(s)	1351
MvnI	CGCG	1 cut(s)	294
MwoI	GCNNNNNNNGC	2 cut(s)	297, 621
NcoI	CCATGG	1 cut(s)	1003
NdeII	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
NlaIII	CATG	8 cut(s)	452, 671, 690, 734, 856, 1007, 1133, 1374
NlaIV	GGNNCC	3 cut(s)	301, 664, 958
NmuCI	GTSAC	2 cut(s)	216, 508
NsiI	ATGCAT	1 cut(s)	617
PagI	TCATGA	1 cut(s)	1129
PctI	GAATGC	2 cut(s)	617, 751
PdmI	GAANNNNTTC	1 cut(s)	1318
PfeI	GAWTC	1 cut(s)	71
PkrI	GCNGC	5 cut(s)	293, 330, 693, 1183, 1389
PleI	GAGTC	3 cut(s)	223, 710, 850
PpsI	GAGTC	3 cut(s)	223, 710, 850
PsiI	TTATAA	1 cut(s)	698
Psp6I	CCWGG	1 cut(s)	1349
PspGI	CCWGG	1 cut(s)	1349
PspN4I	GGNNCC	3 cut(s)	301, 664, 958
PspPI	GGNCC	3 cut(s)	225, 1021, 1163
PsuI	RGATCY	1 cut(s)	127
RsaI	GTAC	2 cut(s)	361, 432
RsaNI	GTAC	2 cut(s)	360, 431
SaqAI	TTAA	4 cut(s)	908, 999, 1251, 1266
SatI	GCNGC	5 cut(s)	292, 329, 692, 1182, 1388
Sau3AI	GATC	5 cut(s)	127, 514, 1076, 1240, 1309
Sau96I	GGNCC	3 cut(s)	225, 1021, 1163
SchI	GAGTC	3 cut(s)	224, 710, 850
ScrFI	CCNGG	1 cut(s)	1351
SfaNI	GCATC	1 cut(s)	1326
SinI	GGWCC	1 cut(s)	225
Sse9I	AATT	9 cut(s)	5, 11, 25, 134, 175, 520, 869, 877, 1092
SsiI	CCGC	2 cut(s)	292, 691
StyD4I	CCNGG	1 cut(s)	1349
StyI	CCWWGG	1 cut(s)	1003
TaaI	ACNGT	6 cut(s)	222, 404, 679, 710, 1301, 1357
TaqI	TCGA	4 cut(s)	51, 1056, 1312, 1322
TaqII	GACCGA	1 cut(s)	496
TasI	AATT	9 cut(s)	5, 11, 25, 134, 175, 520, 869, 877, 1092
TauI	GCSGC	2 cut(s)	294, 694
TfiI	GAWTC	1 cut(s)	71
Tru1I	TTAA	4 cut(s)	908, 999, 1251, 1266
Tru9I	TTAA	4 cut(s)	908, 999, 1251, 1266
TscAI	CASTG	5 cut(s)	85, 275, 352, 713, 1078
TseFI	GTSAC	2 cut(s)	216, 508
TseI	GCWGC	3 cut(s)	328, 1181, 1387
Tsp45I	GTSAC	2 cut(s)	216, 508
TspDTI	ATGAA	7 cut(s)	31, 135, 138, 747, 1118, 1146, 1359
TspGWI	ACGGA	1 cut(s)	969
TspRI	CASTG	5 cut(s)	85, 275, 352, 713, 1078
VpaK11BI	GGWCC	1 cut(s)	225
XapI	RAATTY	4 cut(s)	11, 25, 175, 877
XcmI	CCANNNNNNNNNTGG	2 cut(s)	219, 709
XmiI	GTMKAC	1 cut(s)	656
XmnI	GAANNNNTTC	1 cut(s)	1318
Zsp2I	ATGCAT	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.