Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006022

Physical Location & Seq

Genomic Coordinates Forward (+)

26976270 .. 26979877

Gene Structure 3608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013169

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGAATAAGCGATTGAAAACGAGCAGCGACAAGGCTGTCGTCAATCTTTGGCAGCGACAGCTGGGCGAGCTCTCCGCCAGAAACTTTGCTCACCGTCTCGGTGGCTCTGAGGATCTCGTGCTCCGACTTGATGTCCACAGGAAGCTGGACAAGCATAGAGGATGTGTGAACACCGTAAGCTTCAATGCAGATGGCGATATTTTGCTTTCGGGTTCTGATGACAGGCGGCTCATACTATGGAACTGGGAAACGGGGAAAGTTAAGTTGTCATTCCATTCCAGTCATAATCGCAATGTTTTCCAAGCAAAGTTCATGCCTTATAGTGATGATCGAAGCATTGTCACTTGTGCTGCTGATGGGCAGGTGAGACATACTCAGATTTTAGAACGAGGACAAGTGGAAAGTTCATTGTTGGCCAGACACCATGGACGCGCTCATAAGTTAGCTATTGAGCCTGGGAGCCCTCATATTTTCTATACCTGTGGTGAAGATGGACTGGTGCAACATTTTGATCTCAGAACTCGGGCTCCCACGAAACTTTTGACATGCCAAACACTTGATGGTAGAAGGAGTTACTTGCCAGTTATCAGTCTAAATGCAATTGCAATTGACCCAAGAAATCCAAATCTCTTTGCAGTCGCAGGTTCTGATGAGTATACCCGGCTTTTTGATATCCGCAAGTATAACTGGGATGGATCATCTGATTTTGGTCAACCCACGAACTACTTCTGCCCACCACATTTGCTTGGTAATGACCAAGTTGGAATTACAGGCTTGGCCTTTTCAGAACAAAGTGAGCTTCTTGTATCATACAATGATGAGTCCATCTATCTTTTTACACGAGAAATGGGATTAGGACCTAATCCTCCCATTTCCATGAGTAGTGATGGAAGTGAAATGAGTGATGATCACGAGTCTGAAGAATCTCCATCATCCATGGATACTGATGAAAAAACTGTTCCTCAAGTTTACAAGGGTCACATGAACTCTGAGACAGTGAAAGGTGTGAACTTCTTTGGGCCGAAATGCGAGTATGTTGTGAGTGGGTCTGACTGTGGGCGGATATTCATATGGAAGAAAAAGGGAGGTGAGTTGATTCGTGTCATGGAAGGAGATAAGGATGTAGTAAACTGTATCAAGTCTCATCCTCACACCATGGTACTTGCAAGCAGTGGAATTGAAAATGATATTAAGATCTGGACTCCAAAGGCTCTAGAGAGAGCTACTCTGCCTCAGAACATTGAACAGAAACCCAAGGCTAAGGACTGGATGTACAGCTTTTCGCCTCAGGAATTGATGCTGCAACTTTTTTCACTGCAACGGCGGAGGACAAGCCCAGAGCACAGTGGGGAAAACTCATCGGCAGATCTAGAGTTAATACTGACATTAGATGCCCACAATGATGATTATCCAGGAGAAGAAGACGACGATGACAACTCCAGCCAAGGGGATTTTGTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005829 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

488

Amino Acids

54.78

Weight (kDa)

5.58

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_CAF1B_HIR1	PF24105	4 - 130	1.7e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	8 - 135	3.8e-08	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	44 - 182	6.4e-14	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	46 - 170	2.5e-11	WDR3 first beta-propeller domain
WD40	PF00400	47 - 81	9.4e-07	WD domain, G-beta repeat
WDR55	PF24796	48 - 175	5.1e-08	WDR55
Beta-prop_WDR3_2nd	PF25172	48 - 169	6.1e-06	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	50 - 225	5.1e-08	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	52 - 123	3.4e-09	THOC3 beta-propeller domain
WD40_Prp19	PF24814	56 - 229	1.9e-11	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	314 - 401	1.7e-14	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35140 AT4G35140 AT4G38480 AT4G38480
fragaria_vesca	FvH4_2g15750 FvH4_2g15750 FvH4_2g15750
malus_domestica	MD05G1126500.v1.1
prunus_persica	Prupe.8G169900_v2.0.a1 Prupe.8G169900_v2.0.a1 Prupe.8G169900_v2.0.a1
pyrus_communis	pycom05g12230
rosa_chinensis	RchiOBHm_Chr6g0279061 RchiOBHm_Chr6g0279071
rosa_laevigata	RLG00000013169
rosa_multiflora	Rmu_co8384295.1_g000001
rosa_roxburghii	Rroxscaffold_7G00189170
rosa_rugosa	Rorug06G0121800 Rorug06G0121900 Rorug06G0122000
rosa_samantha	Rh6AG230800 Rh6BG235600 Rh6CG237700 Rh6DG229300
rosa_wichuraiana	Rw0G017050 Rw0G021130 Rw6G020200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	352
AasI	GACNNNNNNGTC	1 cut(s)	35
Acc36I	ACCTGC	2 cut(s)	352, 632
AccI	GTMKAC	1 cut(s)	656
AccII	CGCG	1 cut(s)	432
AciI	CCGC	5 cut(s)	75, 226, 676, 1060, 1324
AclWI	GGATC	2 cut(s)	120, 703
AcoI	YGGCCR	1 cut(s)	414
AcuI	CTGAAG	1 cut(s)	939
AfaI	GTAC	2 cut(s)	1161, 1274
AfiI	CCNNNNNNNGG	1 cut(s)	1446
AgsI	TTSAA	4 cut(s)	16, 184, 1181, 1244
AhdI	GACNNNNNGTC	1 cut(s)	131
AjnI	CCWGG	2 cut(s)	454, 1411
AloI	GAACNNNNNNTCC	2 cut(s)	511, 543
AluBI	AGCT	8 cut(s)	61, 70, 145, 180, 446, 799, 1223, 1278
AluI	AGCT	8 cut(s)	61, 70, 145, 180, 446, 799, 1223, 1278
Alw21I	GWGCWC	3 cut(s)	72, 123, 1344
Alw26I	GTCTC	4 cut(s)	101, 361, 986, 1146
AlwI	GGATC	2 cut(s)	120, 703
AlwNI	CAGNNNCTG	1 cut(s)	647
Ama87I	CYCGRG	1 cut(s)	522
AoxI	GGCC	3 cut(s)	414, 777, 1019
ApeKI	GCWGC	4 cut(s)	24, 52, 350, 1300
Asp700I	GAANNNNTTC	1 cut(s)	725
AspLEI	GCGC	1 cut(s)	434
AspS9I	GGNCC	2 cut(s)	857, 1019
AsuC2I	CCSGG	1 cut(s)	661
AsuHPI	GGTGA	4 cut(s)	83, 376, 497, 1100
AvaI	CYCGRG	1 cut(s)	522
AvaII	GGWCC	1 cut(s)	857
AxyI	CCTNAGG	1 cut(s)	1287
BalI	TGGCCA	1 cut(s)	416
BanII	GRGCYC	3 cut(s)	72, 464, 529
BauI	CACGAG	3 cut(s)	116, 840, 911
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	3 cut(s)	72, 123, 1344
BbvI	GCAGC	4 cut(s)	36, 64, 337, 1287
BccI	CCATC	8 cut(s)	185, 350, 485, 554, 686, 833, 881, 937
BceAI	ACGGC	1 cut(s)	1337
BciT130I	CCWGG	2 cut(s)	456, 1413
BciVI	GTATCC	1 cut(s)	934
BclI	TGATCA	1 cut(s)	907
BcnI	CCSGG	1 cut(s)	661
BcoDI	GTCTC	4 cut(s)	101, 361, 986, 1146
BfaI	CTAG	2 cut(s)	1214, 1370
BfuAI	ACCTGC	2 cut(s)	352, 632
BfuI	GTATCC	1 cut(s)	934
BglII	AGATCT	2 cut(s)	1194, 1366
BisI	GCNGC	5 cut(s)	25, 53, 227, 351, 1301
BlsI	GCNGC	5 cut(s)	26, 54, 228, 352, 1302
Bme1390I	CCNGG	3 cut(s)	456, 661, 1413
Bme18I	GGWCC	1 cut(s)	857
BmeRI	GACNNNNNGTC	1 cut(s)	131
BmeT110I	CYCGRG	1 cut(s)	522
BmgT120I	GGNCC	2 cut(s)	857, 1019
BmiI	GGNNCC	2 cut(s)	461, 528
BmrFI	CCNGG	3 cut(s)	456, 661, 1413
BmrI	ACTGGG	2 cut(s)	253, 697
BmsI	GCATC	2 cut(s)	1287, 1381
BmuI	ACTGGG	2 cut(s)	253, 697
BpiI	GAAGAC	1 cut(s)	1428
BplI	GAGNNNNNCTC	4 cut(s)	358, 390, 1210, 1242
BpmI	CTGGAG	1 cut(s)	1423
Bpu10I	CCTNAGC	1 cut(s)	1260
BpuEI	CTTGAG	1 cut(s)	948
BpuMI	CCSGG	1 cut(s)	661
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaJI	CCNNGG	6 cut(s)	424, 455, 936, 1155, 1254, 1444
BsaXI	ACNNNNNCTCC	2 cut(s)	511, 541
Bsc4I	CCNNNNNNNGG	1 cut(s)	1446
Bse1I	ACTGG	6 cut(s)	248, 279, 501, 581, 692, 1271
Bse21I	CCTNAGG	1 cut(s)	1287
Bse3DI	GCAATG	1 cut(s)	298
Bse8I	GATNNNNATC	1 cut(s)	1407
BseBI	CCWGG	2 cut(s)	456, 1413
BseDI	CCNNGG	6 cut(s)	424, 455, 936, 1155, 1254, 1444
BseGI	GGATG	6 cut(s)	167, 697, 932, 1126, 1144, 1275
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	1 cut(s)	1446
BseMI	GCAATG	1 cut(s)	298
BseMII	CTCAG	6 cut(s)	99, 389, 529, 981, 1247, 1301
BseNI	ACTGG	6 cut(s)	248, 279, 501, 581, 692, 1271
BseXI	GCAGC	4 cut(s)	36, 64, 337, 1287
BseYI	CCCAGC	1 cut(s)	61
Bsh1236I	CGCG	1 cut(s)	432
BshFI	GGCC	3 cut(s)	416, 779, 1021
BsiHKAI	GWGCWC	3 cut(s)	72, 123, 1344
BsiHKCI	CYCGRG	1 cut(s)	522
BsiSI	CCGG	1 cut(s)	661
BslI	CCNNNNNNNGG	1 cut(s)	1446
BsmAI	GTCTC	4 cut(s)	101, 361, 986, 1146
BsmBI	CGTCTC	1 cut(s)	101
BsnI	GGCC	3 cut(s)	416, 779, 1021
BsoBI	CYCGRG	1 cut(s)	522
Bsp1286I	GDGCHC	5 cut(s)	72, 123, 464, 529, 1344
Bsp1407I	TGTACA	1 cut(s)	1272
Bsp143I	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
Bsp19I	CCATGG	3 cut(s)	424, 936, 1155
BspACI	CCGC	5 cut(s)	75, 226, 676, 1060, 1324
BspANI	GGCC	3 cut(s)	416, 779, 1021
BspCNI	CTCAG	6 cut(s)	100, 388, 528, 982, 1246, 1300
BspFNI	CGCG	1 cut(s)	432
BspLI	GGNNCC	2 cut(s)	461, 528
BspMI	ACCTGC	2 cut(s)	352, 632
BspPI	GGATC	2 cut(s)	120, 703
BsrDI	GCAATG	1 cut(s)	298
BsrGI	TGTACA	1 cut(s)	1272
BsrI	ACTGG	6 cut(s)	248, 279, 501, 581, 692, 1271
BssECI	CCNNGG	6 cut(s)	424, 455, 936, 1155, 1254, 1444
BssMI	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
BssNAI	GTATAC	1 cut(s)	657
BssSI	CACGAG	3 cut(s)	116, 840, 911
BssT1I	CCWWGG	5 cut(s)	424, 936, 1155, 1254, 1444
Bst1107I	GTATAC	1 cut(s)	657
Bst2BI	CACGAG	3 cut(s)	116, 840, 911
Bst2UI	CCWGG	2 cut(s)	456, 1413
Bst4CI	ACNGT	7 cut(s)	95, 175, 958, 997, 1055, 1133, 1346
BstAUI	TGTACA	1 cut(s)	1272
BstC8I	GCNNGC	2 cut(s)	68, 1168
BstDEI	CTNAG	7 cut(s)	108, 375, 515, 990, 1233, 1260, 1287
BstDSI	CCRYGG	3 cut(s)	424, 936, 1155
BstF5I	GGATG	6 cut(s)	167, 697, 932, 1126, 1144, 1275
BstFNI	CGCG	1 cut(s)	432
BstHHI	GCGC	1 cut(s)	434
BstKTI	GATC	7 cut(s)	115, 331, 514, 698, 910, 1197, 1369
BstMAI	GTCTC	4 cut(s)	101, 361, 986, 1146
BstMBI	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
BstMWI	GCNNNNNNNGC	3 cut(s)	58, 67, 151
BstNI	CCWGG	2 cut(s)	456, 1413
BstNSI	RCATGY	1 cut(s)	549
BstSCI	CCNGG	3 cut(s)	454, 659, 1411
BstUI	CGCG	1 cut(s)	432
BstV1I	GCAGC	4 cut(s)	36, 64, 337, 1287
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	3 cut(s)	112, 1194, 1366
BstYI	RGATCY	3 cut(s)	112, 1194, 1366
BstZ17I	GTATAC	1 cut(s)	657
Bsu36I	CCTNAGG	1 cut(s)	1287
BsuI	GTATCC	1 cut(s)	934
BsuRI	GGCC	3 cut(s)	416, 779, 1021
BtgI	CCRYGG	3 cut(s)	424, 936, 1155
BtsCI	GGATG	6 cut(s)	167, 697, 932, 1126, 1144, 1275
BtsI	GCAGTG	2 cut(s)	1177, 1313
BtsIMutI	CAGTG	4 cut(s)	1002, 1177, 1313, 1351
BveI	ACCTGC	2 cut(s)	352, 632
Cac8I	GCNNGC	2 cut(s)	68, 1168
CaiI	CAGNNNCTG	1 cut(s)	647
CfoI	GCGC	1 cut(s)	434
Cfr13I	GGNCC	2 cut(s)	857, 1019
CseI	GACGC	1 cut(s)	438
Csp6I	GTAC	2 cut(s)	1160, 1273
CspCI	CAANNNNNGTGG	2 cut(s)	723, 758
CviAII	CATG	8 cut(s)	313, 425, 546, 877, 937, 982, 1105, 1156
CviQI	GTAC	2 cut(s)	1160, 1273
DdeI	CTNAG	7 cut(s)	108, 375, 515, 990, 1233, 1260, 1287
DpnI	GATC	7 cut(s)	114, 330, 513, 697, 909, 1196, 1368
DpnII	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
DrdI	GACNNNNNNGTC	1 cut(s)	35
DriI	GACNNNNNGTC	1 cut(s)	131
DseDI	GACNNNNNNGTC	1 cut(s)	35
EaeI	YGGCCR	1 cut(s)	414
Eam1105I	GACNNNNNGTC	1 cut(s)	131
EciI	GGCGGA	3 cut(s)	64, 1075, 1339
Ecl136II	GAGCTC	1 cut(s)	70
Eco130I	CCWWGG	5 cut(s)	424, 936, 1155, 1254, 1444
Eco24I	GRGCYC	3 cut(s)	72, 464, 529
Eco32I	GATATC	1 cut(s)	673
Eco47I	GGWCC	1 cut(s)	857
Eco53kI	GAGCTC	1 cut(s)	70
Eco57I	CTGAAG	1 cut(s)	939
Eco81I	CCTNAGG	1 cut(s)	1287
Eco88I	CYCGRG	1 cut(s)	522
EcoICRI	GAGCTC	1 cut(s)	70
EcoO109I	RGGNCCY	1 cut(s)	857
EcoRII	CCWGG	2 cut(s)	454, 1411
EcoRV	GATATC	1 cut(s)	673
EcoT14I	CCWWGG	5 cut(s)	424, 936, 1155, 1254, 1444
EcoT38I	GRGCYC	3 cut(s)	72, 464, 529
ErhI	CCWWGG	5 cut(s)	424, 936, 1155, 1254, 1444
Esp3I	CGTCTC	1 cut(s)	101
FaeI	CATG	8 cut(s)	316, 428, 549, 880, 940, 985, 1108, 1159
FatI	CATG	8 cut(s)	312, 424, 545, 876, 936, 981, 1104, 1155
FauNDI	CATATG	1 cut(s)	1070
FbaI	TGATCA	1 cut(s)	907
FblI	GTMKAC	1 cut(s)	656
Fnu4HI	GCNGC	5 cut(s)	25, 53, 227, 351, 1301
FokI	GGATG	6 cut(s)	174, 704, 919, 1131, 1133, 1282
FriOI	GRGCYC	3 cut(s)	72, 464, 529
Fsp4HI	GCNGC	5 cut(s)	25, 53, 227, 351, 1301
FspBI	CTAG	2 cut(s)	1214, 1370
GlaI	GCGC	1 cut(s)	433
GluI	GCNGC	5 cut(s)	25, 53, 227, 351, 1301
GsaI	CCCAGC	1 cut(s)	65
GsuI	CTGGAG	1 cut(s)	1423
HaeIII	GGCC	3 cut(s)	416, 779, 1021
HapII	CCGG	1 cut(s)	661
HgaI	GACGC	1 cut(s)	438
HhaI	GCGC	1 cut(s)	434
Hin1II	CATG	8 cut(s)	316, 428, 549, 880, 940, 985, 1108, 1159
Hin6I	GCGC	1 cut(s)	432
HinP1I	GCGC	1 cut(s)	432
HincII	GTYRAC	1 cut(s)	713
HindII	GTYRAC	1 cut(s)	713
HindIII	AAGCTT	1 cut(s)	178
HinfI	GANTC	5 cut(s)	821, 914, 923, 1096, 1201
HpaII	CCGG	1 cut(s)	661
HphI	GGTGA	4 cut(s)	83, 376, 497, 1100
Hpy166II	GTNNAC	7 cut(s)	136, 169, 657, 713, 970, 1009, 1129
Hpy188III	TCNNGA	5 cut(s)	911, 1198, 1214, 1289, 1370
Hpy8I	GTNNAC	7 cut(s)	136, 169, 657, 713, 970, 1009, 1129
Hpy99I	CGWCG	1 cut(s)	1430
HpyAV	CCTTC	2 cut(s)	561, 1103
HpyCH4III	ACNGT	7 cut(s)	95, 175, 958, 997, 1055, 1133, 1346
HpyCH4V	TGCA	8 cut(s)	188, 502, 599, 605, 635, 1166, 1303, 1318
HpyF10VI	GCNNNNNNNGC	3 cut(s)	58, 67, 151
HpyF3I	CTNAG	7 cut(s)	108, 375, 515, 990, 1233, 1260, 1287
Hsp92II	CATG	8 cut(s)	316, 428, 549, 880, 940, 985, 1108, 1159
HspAI	GCGC	1 cut(s)	432
Ksp22I	TGATCA	1 cut(s)	907
Kzo9I	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
LmnI	GCTCC	3 cut(s)	126, 459, 532
Lsp1109I	GCAGC	4 cut(s)	36, 64, 337, 1287
LweI	GCATC	2 cut(s)	1287, 1381
MaeI	CTAG	2 cut(s)	1214, 1370
MaeIII	GTNAC	3 cut(s)	340, 572, 977
MalI	GATC	7 cut(s)	114, 330, 513, 697, 909, 1196, 1368
MboI	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
MboII	GAAGA	5 cut(s)	500, 932, 1087, 1430, 1433
MfeI	CAATTG	2 cut(s)	600, 606
MflI	RGATCY	3 cut(s)	112, 1194, 1366
MhlI	GDGCHC	5 cut(s)	72, 123, 464, 529, 1344
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	5 cut(s)	600, 606, 765, 1176, 1292
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	3 cut(s)	830, 923, 1195
MmeI	TCCRAC	2 cut(s)	148, 742
Mox20I	TGGCCA	1 cut(s)	416
MroXI	GAANNNNTTC	1 cut(s)	725
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	3 cut(s)	261, 1191, 1376
MslI	CAYNNNNRTG	2 cut(s)	875, 1401
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	1 cut(s)	61
MspI	CCGG	1 cut(s)	661
MspR9I	CCNGG	3 cut(s)	456, 661, 1413
MunI	CAATTG	2 cut(s)	600, 606
MvaI	CCWGG	2 cut(s)	456, 1413
MvnI	CGCG	1 cut(s)	432
MwoI	GCNNNNNNNGC	3 cut(s)	58, 67, 151
NciI	CCSGG	1 cut(s)	661
NcoI	CCATGG	3 cut(s)	424, 936, 1155
NdeI	CATATG	1 cut(s)	1070
NdeII	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
NlaIII	CATG	8 cut(s)	316, 428, 549, 880, 940, 985, 1108, 1159
NlaIV	GGNNCC	2 cut(s)	461, 528
NmuCI	GTSAC	2 cut(s)	340, 977
NspI	RCATGY	1 cut(s)	549
PaqCI	CACCTGC	1 cut(s)	352
PdmI	GAANNNNTTC	1 cut(s)	725
PfeI	GAWTC	2 cut(s)	923, 1096
PfoI	TCCNGGA	1 cut(s)	1411
PkrI	GCNGC	5 cut(s)	26, 54, 228, 352, 1302
PleI	GAGTC	3 cut(s)	829, 922, 1195
PpsI	GAGTC	3 cut(s)	829, 922, 1195
PpuMI	RGGWCCY	1 cut(s)	857
Psp124BI	GAGCTC	1 cut(s)	72
Psp5II	RGGWCCY	1 cut(s)	857
Psp6I	CCWGG	2 cut(s)	454, 1411
PspFI	CCCAGC	1 cut(s)	61
PspGI	CCWGG	2 cut(s)	454, 1411
PspN4I	GGNNCC	2 cut(s)	461, 528
PspPI	GGNCC	2 cut(s)	857, 1019
PspPPI	RGGWCCY	1 cut(s)	857
PstNI	CAGNNNCTG	1 cut(s)	647
PsuI	RGATCY	3 cut(s)	112, 1194, 1366
PvuII	CAGCTG	1 cut(s)	61
RsaI	GTAC	2 cut(s)	1161, 1274
RsaNI	GTAC	2 cut(s)	1160, 1273
RseI	CAYNNNNRTG	2 cut(s)	875, 1401
SacI	GAGCTC	1 cut(s)	72
SaqAI	TTAA	3 cut(s)	261, 1191, 1376
SatI	GCNGC	5 cut(s)	25, 53, 227, 351, 1301
Sau3AI	GATC	7 cut(s)	112, 328, 511, 695, 907, 1194, 1366
Sau96I	GGNCC	2 cut(s)	857, 1019
SchI	GAGTC	3 cut(s)	830, 923, 1195
ScrFI	CCNGG	3 cut(s)	456, 661, 1413
SduI	GDGCHC	5 cut(s)	72, 123, 464, 529, 1344
SfaNI	GCATC	2 cut(s)	1287, 1381
SinI	GGWCC	1 cut(s)	857
SmiMI	CAYNNNNRTG	2 cut(s)	875, 1401
SmlI	CTYRAG	1 cut(s)	963
SmoI	CTYRAG	1 cut(s)	963
Sse9I	AATT	5 cut(s)	600, 606, 765, 1176, 1292
SsiI	CCGC	5 cut(s)	75, 226, 676, 1060, 1324
SspMI	CTAG	2 cut(s)	1214, 1370
SstI	GAGCTC	1 cut(s)	72
StyD4I	CCNGG	3 cut(s)	454, 659, 1411
StyI	CCWWGG	5 cut(s)	424, 936, 1155, 1254, 1444
TaaI	ACNGT	7 cut(s)	95, 175, 958, 997, 1055, 1133, 1346
TaqI	TCGA	1 cut(s)	331
TasI	AATT	5 cut(s)	600, 606, 765, 1176, 1292
TatI	WGTACW	1 cut(s)	1272
TauI	GCSGC	1 cut(s)	229
TfiI	GAWTC	2 cut(s)	923, 1096
Tru1I	TTAA	3 cut(s)	261, 1191, 1376
Tru9I	TTAA	3 cut(s)	261, 1191, 1376
TscAI	CASTG	4 cut(s)	1002, 1177, 1320, 1351
TseFI	GTSAC	2 cut(s)	340, 977
TseI	GCWGC	4 cut(s)	24, 52, 350, 1300
Tsp45I	GTSAC	2 cut(s)	340, 977
TspDTI	ATGAA	6 cut(s)	17, 301, 396, 963, 998, 1057
TspRI	CASTG	4 cut(s)	1002, 1177, 1320, 1351
VpaK11BI	GGWCC	1 cut(s)	857
XbaI	TCTAGA	2 cut(s)	1213, 1369
XceI	RCATGY	1 cut(s)	549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	557
XmiI	GTMKAC	1 cut(s)	656
XmnI	GAANNNNTTC	1 cut(s)	725
XspI	CTAG	2 cut(s)	1214, 1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.